MELO3C023621 (gene) Melon (DHL92) v4

Overview


Name	MELO3C023621
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	short-chain dehydrogenase reductase 3b-like
Location	chr01: 32231214 .. 32232088 (+)
RNA-Seq Expression	MELO3C023621
Synteny	MELO3C023621

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCATTGGTGTCGACCAGGTTAGCTTTCATCATTGTGATGTGAGAGACGAGAAGCAAGTTGAAGAAACCGTGACCTATACTATCGAAAAACATGGCCACCTTGACATTCTTGTCAGCAATGCTGGCACTGCAGAGAAGCCCTCTTCAATTCTAGAGCTTGACATGTCTAACGTTGACAATGTATTTTCGACCAACGTTCGTGGAGTATGTTATACTAATCCATATTTTACTCCATCATAGGCGCGTTCATTTGACAATAATTTTATTTAAGGTTTTATGTTTAACGAGCGATAAAAATCTATCATTGACTTTGTTATGTTTGCAATTTTTTAAAAAATATGTTATAGAGAGTATTAGCATCGTATGAAGTCTTGTATATTGAAAAGTTGCGATATGTTTTAAATTTTCGTTAACCCATGCATGCAATTTTTTAAATTAAATTAAAGGTACTTGCAACGATCAAACATGCTGGAGGAGCAATGGTGAAGCAAGAAATACGAGGGTCGATCATCTGCATGGGGAGCACGACATCGGTACTTTCATTGTATACATCGTTAGCGGCATACACAAGCTCAAAGCATGCGGTGTTGGGGGATGGTGAGGTCGAGCTGTGGGGAGCTAGGGACGTTTGGAATAAGGGTGAACTGCGTGTCACCGCACGGGCTGGCAACGCCGCTGGCTTGCCGGAGTTTGTATATGGAAGAGAGTGAGATTGAAGAGTTTTTCAGTTCAAAGGCAAGTTTGAAGGGTGTGGTGTTGAAGGCTAGCCATATAGCAGAGGCTGTTATGTTTCTTGCATCAGATGAATCGGTTTACATAAGTGGACAAAACTTGATTATTGATGGAGGCTTCACTGCGGTCAAATCATTAAT

mRNA sequence

ATGTCCATTGGTGTCGACCAGGTTAGCTTTCATCATTGTGATGTGAGAGACGAGAAGCAAGTTGAAGAAACCGTGACCTATACTATCGAAAAACATGGCCACCTTGACATTCTTGTCAGCAATGCTGGCACTGCAGAGAAGCCCTCTTCAATTCTAGAGCTTGACATGTCTAACGTTGACAATGTATTTTCGACCAACGTTCGTGGAGTACTTGCAACGATCAAACATGCTGGAGGAGCAATGGTGAAGCAAGAAATACGAGGGTCGATCATCTGCATGGGGAGCACGACATCGGTACTTTCATTGTATACATCGTTAGCGGCATACACAAGCTCAAAGCATGCGGTGTTGGGGGATGTAAGGGTGAACTGCGTGTCACCGCACGGGCTGGCAACGCCGCTGGCTTGCCGGAGTTTGTATATGGAAGAGAGTGAGATTGAAGAGTTTTTCAGTTCAAAGGCAAGTTTGAAGGGTGTGGTGTTGAAGGCTAGCCATATAGCAGAGGCTGTTATGTTTCTTGCATCAGATGAATCGGTTTACATAAGTGGACAAAACTTGATTATTGATGGAGGCTTCACTGCGGTCAAATCATTAAT

Coding sequence (CDS)

ATGTCCATTGGTGTCGACCAGGTTAGCTTTCATCATTGTGATGTGAGAGACGAGAAGCAAGTTGAAGAAACCGTGACCTATACTATCGAAAAACATGGCCACCTTGACATTCTTGTCAGCAATGCTGGCACTGCAGAGAAGCCCTCTTCAATTCTAGAGCTTGACATGTCTAACGTTGACAATGTATTTTCGACCAACGTTCGTGGAGTACTTGCAACGATCAAACATGCTGGAGGAGCAATGGTGAAGCAAGAAATACGAGGGTCGATCATCTGCATGGGGAGCACGACATCGGTACTTTCATTGTATACATCGTTAGCGGCATACACAAGCTCAAAGCATGCGGTGTTGGGGGATGTAAGGGTGAACTGCGTGTCACCGCACGGGCTGGCAACGCCGCTGGCTTGCCGGAGTTTGTATATGGAAGAGAGTGAGATTGAAGAGTTTTTCAGTTCAAAGGCAAGTTTGAAGGGTGTGGTGTTGAAGGCTAGCCATATAGCAGAGGCTGTTATGTTTCTTGCATCAGATGAATCGGTTTACATAAGTGGACAAAACTTGATTATTGATGGAGGCTTCACTGCGGTCAAATCATTA

Protein sequence

MSIGVDQVSFHHCDVRDEKQVEETVTYTIEKHGHLDILVSNAGTAEKPSSILELDMSNVDNVFSTNVRGVLATIKHAGGAMVKQEIRGSIICMGSTTSVLSLYTSLAAYTSSKHAVLGDVRVNCVSPHGLATPLACRSLYMEESEIEEFFSSKASLKGVVLKASHIAEAVMFLASDESVYISGQNLIIDGGFTAVKSL

Homology

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BLAST of MELO3C023621 vs. NCBI nr
Match: XP_008461399.1 (PREDICTED: short-chain dehydrogenase reductase 3b-like [Cucumis melo] >KAA0058549.1 short-chain dehydrogenase reductase 3b-like [Cucumis melo var. makuwa] >TYK01626.1 short-chain dehydrogenase reductase 3b-like [Cucumis melo var. makuwa])

HSP 1 Score: 320.1 bits (819), Expect = 1.4e-83
Identity = 169/209 (80.86%), Postives = 181/209 (86.60%), Query Frame = 0


Query: 2   SIGVDQVSFHHCDVRDEKQVEETVTYTIEKHGHLDILVSNAGTAEKPSSILELDMSNVDN 61
           SIGVD+V+FHHCDVRDEKQVEETV+YTIEKHG LDILVSNAG AE PSSILELDMSN DN
Sbjct: 53  SIGVDRVNFHHCDVRDEKQVEETVSYTIEKHGRLDILVSNAGIAETPSSILELDMSNFDN 112

Query: 62  VFSTNVRGVLATIKHAGGAMVKQEIRGSIICMGSTTSVLSLYTSLAAYTSSKHAVLG--- 121
           V STNVRGV+ATIKHAG AMVKQ+IRGSIIC GST SV+SL  SL AYTSSKHAVLG   
Sbjct: 113 VISTNVRGVVATIKHAGQAMVKQKIRGSIICTGSTASVISLNISLTAYTSSKHAVLGVVR 172

Query: 122 ---------DVRVNCVSPHGLATPLACRSLYMEESEIEEFFSSKASLKGVVLKASHIAEA 181
                     +RVNCVSPHGLATPL C++  MEESE+EEFFSS+ SLKGVVLKASHIAEA
Sbjct: 173 SSCGELGTYGIRVNCVSPHGLATPLTCQNFKMEESEVEEFFSSQPSLKGVVLKASHIAEA 232

Query: 182 VMFLASDESVYISGQNLIIDGGFTAVKSL 199
           VMFLASDESVYISGQNLI+DGGFTAVKSL
Sbjct: 233 VMFLASDESVYISGQNLIVDGGFTAVKSL 261

[Close]

BLAST of MELO3C023621 vs. NCBI nr
Match: XP_004135968.1 (short-chain dehydrogenase reductase 3b [Cucumis sativus] >KGN45051.1 hypothetical protein Csa_015534 [Cucumis sativus])

HSP 1 Score: 311.6 bits (797), Expect = 4.8e-81
Identity = 165/209 (78.95%), Postives = 176/209 (84.21%), Query Frame = 0


Query: 2   SIGVDQVSFHHCDVRDEKQVEETVTYTIEKHGHLDILVSNAGTAEKPSSILELDMSNVDN 61
           SIGVD+V+FHHCDVRDEKQVEETV+YTIEKHGHLDILVSNAG  E PSSILELDMSN DN
Sbjct: 53  SIGVDRVNFHHCDVRDEKQVEETVSYTIEKHGHLDILVSNAGIVETPSSILELDMSNFDN 112

Query: 62  VFSTNVRGVLATIKHAGGAMVKQEIRGSIICMGSTTSVLSLYTSLAAYTSSKHAVLG--- 121
           V STNVRGVLATIKHAG AMVKQ+IRGSI+C GST +++S   SL AYTSSKHAVLG   
Sbjct: 113 VISTNVRGVLATIKHAGRAMVKQKIRGSIVCTGSTAALISFNPSLTAYTSSKHAVLGLVR 172

Query: 122 ---------DVRVNCVSPHGLATPLACRSLYMEESEIEEFFSSKASLKGVVLKASHIAEA 181
                     +RVNCVSPHGLATPLACR L ME SE+EE  SS  SLKGVVLKASHIAEA
Sbjct: 173 SSCEELGMYGIRVNCVSPHGLATPLACRCLNMEVSEVEEKLSSMVSLKGVVLKASHIAEA 232

Query: 182 VMFLASDESVYISGQNLIIDGGFTAVKSL 199
           VMFLASDESVYISGQNLI+DGGFTAVK L
Sbjct: 233 VMFLASDESVYISGQNLIVDGGFTAVKPL 261

[Close]

BLAST of MELO3C023621 vs. NCBI nr
Match: XP_038899160.1 (short-chain dehydrogenase reductase 3b-like [Benincasa hispida])

HSP 1 Score: 283.5 bits (724), Expect = 1.4e-72
Identity = 149/209 (71.29%), Postives = 168/209 (80.38%), Query Frame = 0


Query: 2   SIGVDQVSFHHCDVRDEKQVEETVTYTIEKHGHLDILVSNAGTAEKPSSILELDMSNVDN 61
           SIG +Q SFHHCDVRDEKQVEETV+YT+ K+G LDILVSNAG    PSSILEL+MSN DN
Sbjct: 56  SIGAEQASFHHCDVRDEKQVEETVSYTVGKYGRLDILVSNAGIVGTPSSILELNMSNFDN 115

Query: 62  VFSTNVRGVLATIKHAGGAMVKQEIRGSIICMGSTTSVLSLYTSLAAYTSSKHAVLG--- 121
           V STNVRGV+ATIKHAG  MVKQ+IRGSIICM ST +++S+ TSL  Y SSKHAVLG   
Sbjct: 116 VISTNVRGVVATIKHAGQVMVKQKIRGSIICMASTGALISVNTSLLPYISSKHAVLGVVR 175

Query: 122 ---------DVRVNCVSPHGLATPLACRSLYMEESEIEEFFSSKASLKGVVLKASHIAEA 181
                     +RVNCVSPHG+AT LAC+ L +EESE+EE  SS  SLKGVVLK  HIAEA
Sbjct: 176 SSCGELGEYGIRVNCVSPHGVATRLACQGLNLEESEVEEISSSSVSLKGVVLKTKHIAEA 235

Query: 182 VMFLASDESVYISGQNLIIDGGFTAVKSL 199
           V+FLASDESVYISGQNL++DGGFTAVK L
Sbjct: 236 VLFLASDESVYISGQNLVVDGGFTAVKPL 264

[Close]

BLAST of MELO3C023621 vs. NCBI nr
Match: XP_023547820.1 (short-chain dehydrogenase reductase 3b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 275.0 bits (702), Expect = 5.0e-70
Identity = 147/209 (70.33%), Postives = 165/209 (78.95%), Query Frame = 0


Query: 2   SIGVDQVSFHHCDVRDEKQVEETVTYTIEKHGHLDILVSNAGTAEKPSSILELDMSNVDN 61
           SIG+DQ SFHHCDVRDE QVEETV+YT+EK+G LDILVSNAG     +SILE DMSN DN
Sbjct: 53  SIGIDQASFHHCDVRDENQVEETVSYTVEKYGRLDILVSNAGITGSLTSILEFDMSNFDN 112

Query: 62  VFSTNVRGVLATIKHAGGAMVKQEIRGSIICMGSTTSVLSLYTSLAAYTSSKHAVLG--- 121
           V STNVRGV+ATIKHAG AMVK  IRGSIICM ST SVL   TS+ AYT+SKHAVLG   
Sbjct: 113 VISTNVRGVVATIKHAGQAMVKGNIRGSIICMASTASVLGGITSM-AYTTSKHAVLGVVR 172

Query: 122 ---------DVRVNCVSPHGLATPLACRSLYMEESEIEEFFSSKASLKGVVLKASHIAEA 181
                     +RVNCVSP+ +AT L C    MEESE+EE  S+ ASLKGVVLKASH+AEA
Sbjct: 173 SCCGELGAYGIRVNCVSPYAVATRLTCEFFNMEESEVEELVSASASLKGVVLKASHVAEA 232

Query: 182 VMFLASDESVYISGQNLIIDGGFTAVKSL 199
           V+FLASDES YISGQNL++DGGFTAVKS+
Sbjct: 233 VVFLASDESAYISGQNLVVDGGFTAVKSI 260

[Close]

BLAST of MELO3C023621 vs. NCBI nr
Match: XP_038898766.1 (short-chain dehydrogenase reductase 3b-like [Benincasa hispida])

HSP 1 Score: 273.9 bits (699), Expect = 1.1e-69
Identity = 144/209 (68.90%), Postives = 166/209 (79.43%), Query Frame = 0


Query: 2   SIGVDQVSFHHCDVRDEKQVEETVTYTIEKHGHLDILVSNAGTAEKPSSILELDMSNVDN 61
           SIG+DQ SF HCDVRDEKQVEE V+YT++KHG LDILVSNAG A   SSILELDMSN DN
Sbjct: 53  SIGIDQASFCHCDVRDEKQVEEMVSYTVQKHGRLDILVSNAGIAGASSSILELDMSNFDN 112

Query: 62  VFSTNVRGVLATIKHAGGAMVKQEIRGSIICMGSTTSVLSLYTSLAAYTSSKHAVLG--- 121
           V STNVRGV+ATIKHA  AMVKQ IRGSIIC+ ST + +++  S  +YTSSKHAVLG   
Sbjct: 113 VISTNVRGVVATIKHAARAMVKQNIRGSIICVASTAAQIAVNLSYMSYTSSKHAVLGVVR 172

Query: 122 ---------DVRVNCVSPHGLATPLACRSLYMEESEIEEFFSSKASLKGVVLKASHIAEA 181
                     +RVNCVSPHG+ATP+  R L +E +E EE   SKASLKGVVLKASHIAEA
Sbjct: 173 SSCGELGAYGIRVNCVSPHGVATPMTIRGLNLEATEFEEIVCSKASLKGVVLKASHIAEA 232

Query: 182 VMFLASDESVYISGQNLIIDGGFTAVKSL 199
            +FLASDESVYISGQ+L++DGG+TAVK+L
Sbjct: 233 ALFLASDESVYISGQDLVVDGGYTAVKAL 261

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BLAST of MELO3C023621 vs. ExPASy Swiss-Prot
Match: Q94K41 (Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana OX=3702 GN=SDR3b PE=2 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.5e-48
Identity = 104/210 (49.52%), Postives = 142/210 (67.62%), Query Frame = 0


Query: 1   MSIGVDQVSFHHCDVRDEKQVEETVTYTIEKHGHLDILVSNAGTAEKPSSILELDMSNVD 60
           +SIG D+ S++HCDV +E +VE  V +T+EK+G LD+L SNAG  E   SIL+L+++ +D
Sbjct: 50  VSIGEDKASYYHCDVTNETEVENAVKFTVEKYGKLDVLFSNAGVIEPFVSILDLNLNELD 109

Query: 61  NVFSTNVRGVLATIKHAGGAMVKQEIRGSIICMGSTTSVLSLYTSLA--AYTSSKHAVLG 120
              + N+RG  A IKHA  AMV++ IRGSI+C   TTSV +     A   YT+SKH +LG
Sbjct: 110 RTIAINLRGTAAFIKHAARAMVEKGIRGSIVC---TTSVAAEIAGTAPHGYTTSKHGLLG 169

Query: 121 ------------DVRVNCVSPHGLATPLACRSLYMEESEIEEFFSSKASLKGVVLKASHI 180
                        +RVN V+P G+ATPL C    ME + +E+  S+ A+LKG+VLKA H+
Sbjct: 170 LIKSASGGLGKYGIRVNGVAPFGVATPLVCNGFKMEPNVVEQNTSASANLKGIVLKARHV 229

Query: 181 AEAVMFLASDESVYISGQNLIIDGGFTAVK 197
           AEA +FLASDES Y+SGQNL +DGG++ VK
Sbjct: 230 AEAALFLASDESAYVSGQNLAVDGGYSVVK 256

[Close]

BLAST of MELO3C023621 vs. ExPASy Swiss-Prot
Match: F4J300 (Short-chain dehydrogenase reductase 5 OS=Arabidopsis thaliana OX=3702 GN=SDR5 PE=3 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 4.4e-45
Identity = 103/210 (49.05%), Postives = 139/210 (66.19%), Query Frame = 0


Query: 1   MSIGVDQVSFHHCDVRDEKQVEETVTYTIEKHGHLDILVSNAGTAEKPSSILELDMSNVD 60
           +SIG+D+ SF+ CD+ DE +VE  V +T+EKHG LD+L SNAG  E   SIL+LD+   D
Sbjct: 50  VSIGLDKASFYRCDITDETEVENAVKFTVEKHGKLDVLFSNAGVMEPHGSILDLDLEAFD 109

Query: 61  NVFSTNVRGVLATIKHAGGAMVKQEIRGSIICMGSTTSVLSLYTSLAAYTSSKHAVLG-- 120
              + NVRG  A IKHA  +MV    RGSI+C  S T+ +       +YT+SKHA+LG  
Sbjct: 110 RTMAVNVRGAAAFIKHAARSMVASGTRGSIVCTTSVTAEIG-GPGPHSYTASKHALLGLV 169

Query: 121 ----------DVRVNCVSPHGLATPLACRSLYMEES--EIEEFFSSKASLKGVVLKASHI 180
                      +RVN V+P+G+AT L   + Y EE+   +E++ S+ A LKGVVLKA H+
Sbjct: 170 RSACGGLGKYGIRVNGVAPYGVATGL---TSYNEETVKMVEDYCSATAILKGVVLKARHV 229

Query: 181 AEAVMFLASDESVYISGQNLIIDGGFTAVK 197
           A+A +FLASD+SVYISGQNL +DGG++ VK
Sbjct: 230 ADAALFLASDDSVYISGQNLGVDGGYSVVK 255

[Close]

BLAST of MELO3C023621 vs. ExPASy Swiss-Prot
Match: F4J2Z7 (Short-chain dehydrogenase reductase 4 OS=Arabidopsis thaliana OX=3702 GN=SDR4 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 7.6e-45
Identity = 105/212 (49.53%), Postives = 139/212 (65.57%), Query Frame = 0


Query: 1   MSIGVDQVSFHHCDVRDEKQVEETVTYTIEKHGHLDILVSNAGTAEKPSSILELDMSNVD 60
           +SIG+D+ SF+ C+V DE  VE  V +T+EKHG LD+L SNAG  E   S+L+LD+   D
Sbjct: 88  VSIGLDKASFYRCNVTDETDVENAVKFTVEKHGKLDVLFSNAGVLEAFGSVLDLDLEAFD 147

Query: 61  NVFSTNVRGVLATIKHAGGAMVKQEIRGSIICMGSTTSVLSLYTSLA--AYTSSKHAVLG 120
              + NVRG  A IKHA  +MV    RGSI+C   TTS+ +        +YT+SKHA+LG
Sbjct: 148 RTMAVNVRGAAAFIKHAARSMVASGTRGSIVC---TTSIAAEIGGPGPHSYTASKHALLG 207

Query: 121 ------------DVRVNCVSPHGLATPLACRSLYMEES--EIEEFFSSKASLKGVVLKAS 180
                        +RVN V+P+G+AT +   S Y EE+   +EE+  +  +LKGVVLKA 
Sbjct: 208 LIRSACAGLGQYGIRVNGVAPYGVATGMT--SAYNEEAVKMLEEYGEALGNLKGVVLKAR 267

Query: 181 HIAEAVMFLASDESVYISGQNLIIDGGFTAVK 197
           HIAEA +FLASD+SVYISGQNL++DGGF+ VK
Sbjct: 268 HIAEAALFLASDDSVYISGQNLVVDGGFSVVK 294

[Close]

BLAST of MELO3C023621 vs. ExPASy Swiss-Prot
Match: O80713 (Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana OX=3702 GN=SDR3a PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.9e-44
Identity = 102/214 (47.66%), Postives = 140/214 (65.42%), Query Frame = 0


Query: 1   MSIGVDQVSFHHCDVRDEKQVEETVTYTIEKHGHLDILVSNAGTAEKPSSILELDMSNVD 60
           +S+G D+ SF+ CDV +EK+VE  V +T+EK+G LD+L SNAG  E+P S L+L++   D
Sbjct: 50  VSVGKDKASFYRCDVTNEKEVENAVKFTVEKYGKLDVLFSNAGVMEQPGSFLDLNLEQFD 109

Query: 61  NVFSTNVRGVLATIKHAGGAMVKQEIRGSIICMGSTTSVLSLYTSLA--AYTSSKHAVLG 120
              + NVRG  A IKHA  AMV++  RGSI+C   TTSV S        AYT+SKHA+LG
Sbjct: 110 RTMAVNVRGAAAFIKHAARAMVEKGTRGSIVC---TTSVASEIGGPGPHAYTASKHALLG 169

Query: 121 ------------DVRVNCVSPHGLATPLACRSLYMEES--EIEEFFSSKASLKGVVLKAS 180
                        +RVN V+P+ +AT +  R    EE+   +EE+ ++   LKGVVLKA 
Sbjct: 170 LVKSACGGLGKYGIRVNGVAPYAVATAINSRD---EETVRMVEEYSAATGILKGVVLKAR 229

Query: 181 HIAEAVMFLASDESVYISGQNLIIDGGFTAVKSL 199
           H+AEA +FLASD+S Y+SGQNL +DGG++ VK +
Sbjct: 230 HVAEAALFLASDDSAYVSGQNLAVDGGYSVVKPI 257

[Close]

BLAST of MELO3C023621 vs. ExPASy Swiss-Prot
Match: O80714 (Short-chain dehydrogenase reductase 3c OS=Arabidopsis thaliana OX=3702 GN=SDR3c PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.9e-43
Identity = 96/207 (46.38%), Postives = 133/207 (64.25%), Query Frame = 0


Query: 3   IGVDQVSFHHCDVRDEKQVEETVTYTIEKHGHLDILVSNAGTAEKPSSILELDMSNVDNV 62
           IG D+ SF+ CDV +E +VE+ V +T+EKHG LD+L SNAG  E   S L+ D+   D +
Sbjct: 52  IGKDKASFYRCDVTNETEVEDAVKFTVEKHGKLDVLFSNAGVLEPLESFLDFDLERFDRI 111

Query: 63  FSTNVRGVLATIKHAGGAMVKQEIRGSIICMGSTTSV-LSLYTSLAAYTSSKHAVLG--- 122
            + NVRG  A IKHA  AMV++  RGSI+C   TTSV   +      YT+SKH ++G   
Sbjct: 112 MAVNVRGAAAFIKHAARAMVEKGTRGSIVC---TTSVSAEIGGGHHGYTASKHGLVGLIR 171

Query: 123 ---------DVRVNCVSPHGLATPLACRSLYMEESEIEEFFSSKASLKGVVLKASHIAEA 182
                     +RVN V+P+ +ATP+      +   ++E++F +K  LKG+VLKASH+A+ 
Sbjct: 172 SACGDLGKYGIRVNGVAPYAVATPMTSHD-EVTGKQLEDYFDAKGILKGMVLKASHVAQV 231

Query: 183 VMFLASDESVYISGQNLIIDGGFTAVK 197
            +FLASD+S YISGQNL +DGG+T VK
Sbjct: 232 ALFLASDDSAYISGQNLAVDGGYTVVK 254

[Close]

BLAST of MELO3C023621 vs. ExPASy TrEMBL
Match: A0A5A7UYG2 (Short-chain dehydrogenase reductase 3b-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3840G00030 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 6.6e-84
Identity = 169/209 (80.86%), Postives = 181/209 (86.60%), Query Frame = 0


Query: 2   SIGVDQVSFHHCDVRDEKQVEETVTYTIEKHGHLDILVSNAGTAEKPSSILELDMSNVDN 61
           SIGVD+V+FHHCDVRDEKQVEETV+YTIEKHG LDILVSNAG AE PSSILELDMSN DN
Sbjct: 53  SIGVDRVNFHHCDVRDEKQVEETVSYTIEKHGRLDILVSNAGIAETPSSILELDMSNFDN 112

Query: 62  VFSTNVRGVLATIKHAGGAMVKQEIRGSIICMGSTTSVLSLYTSLAAYTSSKHAVLG--- 121
           V STNVRGV+ATIKHAG AMVKQ+IRGSIIC GST SV+SL  SL AYTSSKHAVLG   
Sbjct: 113 VISTNVRGVVATIKHAGQAMVKQKIRGSIICTGSTASVISLNISLTAYTSSKHAVLGVVR 172

Query: 122 ---------DVRVNCVSPHGLATPLACRSLYMEESEIEEFFSSKASLKGVVLKASHIAEA 181
                     +RVNCVSPHGLATPL C++  MEESE+EEFFSS+ SLKGVVLKASHIAEA
Sbjct: 173 SSCGELGTYGIRVNCVSPHGLATPLTCQNFKMEESEVEEFFSSQPSLKGVVLKASHIAEA 232

Query: 182 VMFLASDESVYISGQNLIIDGGFTAVKSL 199
           VMFLASDESVYISGQNLI+DGGFTAVKSL
Sbjct: 233 VMFLASDESVYISGQNLIVDGGFTAVKSL 261

[Close]

BLAST of MELO3C023621 vs. ExPASy TrEMBL
Match: A0A1S3CF22 (short-chain dehydrogenase reductase 3b-like OS=Cucumis melo OX=3656 GN=LOC103499998 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 6.6e-84
Identity = 169/209 (80.86%), Postives = 181/209 (86.60%), Query Frame = 0


Query: 2   SIGVDQVSFHHCDVRDEKQVEETVTYTIEKHGHLDILVSNAGTAEKPSSILELDMSNVDN 61
           SIGVD+V+FHHCDVRDEKQVEETV+YTIEKHG LDILVSNAG AE PSSILELDMSN DN
Sbjct: 53  SIGVDRVNFHHCDVRDEKQVEETVSYTIEKHGRLDILVSNAGIAETPSSILELDMSNFDN 112

Query: 62  VFSTNVRGVLATIKHAGGAMVKQEIRGSIICMGSTTSVLSLYTSLAAYTSSKHAVLG--- 121
           V STNVRGV+ATIKHAG AMVKQ+IRGSIIC GST SV+SL  SL AYTSSKHAVLG   
Sbjct: 113 VISTNVRGVVATIKHAGQAMVKQKIRGSIICTGSTASVISLNISLTAYTSSKHAVLGVVR 172

Query: 122 ---------DVRVNCVSPHGLATPLACRSLYMEESEIEEFFSSKASLKGVVLKASHIAEA 181
                     +RVNCVSPHGLATPL C++  MEESE+EEFFSS+ SLKGVVLKASHIAEA
Sbjct: 173 SSCGELGTYGIRVNCVSPHGLATPLTCQNFKMEESEVEEFFSSQPSLKGVVLKASHIAEA 232

Query: 182 VMFLASDESVYISGQNLIIDGGFTAVKSL 199
           VMFLASDESVYISGQNLI+DGGFTAVKSL
Sbjct: 233 VMFLASDESVYISGQNLIVDGGFTAVKSL 261

[Close]

BLAST of MELO3C023621 vs. ExPASy TrEMBL
Match: A0A0A0KBA9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G414480 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.3e-81
Identity = 165/209 (78.95%), Postives = 176/209 (84.21%), Query Frame = 0


Query: 2   SIGVDQVSFHHCDVRDEKQVEETVTYTIEKHGHLDILVSNAGTAEKPSSILELDMSNVDN 61
           SIGVD+V+FHHCDVRDEKQVEETV+YTIEKHGHLDILVSNAG  E PSSILELDMSN DN
Sbjct: 53  SIGVDRVNFHHCDVRDEKQVEETVSYTIEKHGHLDILVSNAGIVETPSSILELDMSNFDN 112

Query: 62  VFSTNVRGVLATIKHAGGAMVKQEIRGSIICMGSTTSVLSLYTSLAAYTSSKHAVLG--- 121
           V STNVRGVLATIKHAG AMVKQ+IRGSI+C GST +++S   SL AYTSSKHAVLG   
Sbjct: 113 VISTNVRGVLATIKHAGRAMVKQKIRGSIVCTGSTAALISFNPSLTAYTSSKHAVLGLVR 172

Query: 122 ---------DVRVNCVSPHGLATPLACRSLYMEESEIEEFFSSKASLKGVVLKASHIAEA 181
                     +RVNCVSPHGLATPLACR L ME SE+EE  SS  SLKGVVLKASHIAEA
Sbjct: 173 SSCEELGMYGIRVNCVSPHGLATPLACRCLNMEVSEVEEKLSSMVSLKGVVLKASHIAEA 232

Query: 182 VMFLASDESVYISGQNLIIDGGFTAVKSL 199
           VMFLASDESVYISGQNLI+DGGFTAVK L
Sbjct: 233 VMFLASDESVYISGQNLIVDGGFTAVKPL 261

[Close]

BLAST of MELO3C023621 vs. ExPASy TrEMBL
Match: A0A6J1GMR7 (short-chain dehydrogenase reductase 3b-like OS=Cucurbita moschata OX=3662 GN=LOC111455812 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.3e-68
Identity = 144/209 (68.90%), Postives = 163/209 (77.99%), Query Frame = 0


Query: 2   SIGVDQVSFHHCDVRDEKQVEETVTYTIEKHGHLDILVSNAGTAEKPSSILELDMSNVDN 61
           SIGVDQ SFHHCDVRDE QVEETV+YT+EK+G LDILVSNAG     +SILE DMSN DN
Sbjct: 53  SIGVDQASFHHCDVRDENQVEETVSYTVEKYGRLDILVSNAGITGFLTSILEFDMSNFDN 112

Query: 62  VFSTNVRGVLATIKHAGGAMVKQEIRGSIICMGSTTSVLSLYTSLAAYTSSKHAVLG--- 121
           V STNVRGV+ATIKHAG AMVK  IRGSIICM ST S+L    S  AY +SKHA+LG   
Sbjct: 113 VISTNVRGVVATIKHAGQAMVKGNIRGSIICMASTASMLGGIAS-TAYITSKHALLGVVR 172

Query: 122 ---------DVRVNCVSPHGLATPLACRSLYMEESEIEEFFSSKASLKGVVLKASHIAEA 181
                     +RVNCVSP+G+AT + C S  MEESE+EE  S+ ASLKG VLKASH+AEA
Sbjct: 173 SCCGELGAYGIRVNCVSPYGVATRMTCESFNMEESEVEELVSASASLKGAVLKASHVAEA 232

Query: 182 VMFLASDESVYISGQNLIIDGGFTAVKSL 199
           V+FLASDES YISGQNL++DGGFTAVKS+
Sbjct: 233 VVFLASDESAYISGQNLVVDGGFTAVKSI 260

[Close]

BLAST of MELO3C023621 vs. ExPASy TrEMBL
Match: A0A6J1GMK5 (short-chain dehydrogenase reductase 3b-like OS=Cucurbita moschata OX=3662 GN=LOC111455811 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 2.3e-68
Identity = 142/209 (67.94%), Postives = 162/209 (77.51%), Query Frame = 0


Query: 2   SIGVDQVSFHHCDVRDEKQVEETVTYTIEKHGHLDILVSNAGTAEKPSSILELDMSNVDN 61
           SIG+DQ SFHHCDVRDE QVEETV+YT+EK+G LDILVSNAG     +SILE DMSN DN
Sbjct: 53  SIGIDQASFHHCDVRDENQVEETVSYTVEKYGRLDILVSNAGITGSLTSILEFDMSNFDN 112

Query: 62  VFSTNVRGVLATIKHAGGAMVKQEIRGSIICMGSTTSVLSLYTSLAAYTSSKHAVLG--- 121
           V STNVRGV+ATIKHAG AMVK  IRGSIICM ST S+L    S  AY +SKHAVLG   
Sbjct: 113 VISTNVRGVVATIKHAGQAMVKGNIRGSIICMASTASMLGGIAS-TAYITSKHAVLGVVR 172

Query: 122 ---------DVRVNCVSPHGLATPLACRSLYMEESEIEEFFSSKASLKGVVLKASHIAEA 181
                     +RVNCVSP+G+AT + C    MEESE+EE  S+ ASLKG VLKASH+AEA
Sbjct: 173 SCCGELGAYGIRVNCVSPYGVATRMTCEFFNMEESEVEELVSASASLKGAVLKASHVAEA 232

Query: 182 VMFLASDESVYISGQNLIIDGGFTAVKSL 199
           ++FLASDES YISGQNL++DGGFTAVKS+
Sbjct: 233 IVFLASDESAYISGQNLVVDGGFTAVKSI 260

[Close]

BLAST of MELO3C023621 vs. TAIR 10
Match: AT2G47140.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 194.1 bits (492), Expect = 1.0e-49
Identity = 104/210 (49.52%), Postives = 142/210 (67.62%), Query Frame = 0


Query: 1   MSIGVDQVSFHHCDVRDEKQVEETVTYTIEKHGHLDILVSNAGTAEKPSSILELDMSNVD 60
           +SIG D+ S++HCDV +E +VE  V +T+EK+G LD+L SNAG  E   SIL+L+++ +D
Sbjct: 50  VSIGEDKASYYHCDVTNETEVENAVKFTVEKYGKLDVLFSNAGVIEPFVSILDLNLNELD 109

Query: 61  NVFSTNVRGVLATIKHAGGAMVKQEIRGSIICMGSTTSVLSLYTSLA--AYTSSKHAVLG 120
              + N+RG  A IKHA  AMV++ IRGSI+C   TTSV +     A   YT+SKH +LG
Sbjct: 110 RTIAINLRGTAAFIKHAARAMVEKGIRGSIVC---TTSVAAEIAGTAPHGYTTSKHGLLG 169

Query: 121 ------------DVRVNCVSPHGLATPLACRSLYMEESEIEEFFSSKASLKGVVLKASHI 180
                        +RVN V+P G+ATPL C    ME + +E+  S+ A+LKG+VLKA H+
Sbjct: 170 LIKSASGGLGKYGIRVNGVAPFGVATPLVCNGFKMEPNVVEQNTSASANLKGIVLKARHV 229

Query: 181 AEAVMFLASDESVYISGQNLIIDGGFTAVK 197
           AEA +FLASDES Y+SGQNL +DGG++ VK
Sbjct: 230 AEAALFLASDESAYVSGQNLAVDGGYSVVK 256

[Close]

BLAST of MELO3C023621 vs. TAIR 10
Match: AT3G29260.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 182.6 bits (462), Expect = 3.2e-46
Identity = 103/210 (49.05%), Postives = 139/210 (66.19%), Query Frame = 0


Query: 1   MSIGVDQVSFHHCDVRDEKQVEETVTYTIEKHGHLDILVSNAGTAEKPSSILELDMSNVD 60
           +SIG+D+ SF+ CD+ DE +VE  V +T+EKHG LD+L SNAG  E   SIL+LD+   D
Sbjct: 50  VSIGLDKASFYRCDITDETEVENAVKFTVEKHGKLDVLFSNAGVMEPHGSILDLDLEAFD 109

Query: 61  NVFSTNVRGVLATIKHAGGAMVKQEIRGSIICMGSTTSVLSLYTSLAAYTSSKHAVLG-- 120
              + NVRG  A IKHA  +MV    RGSI+C  S T+ +       +YT+SKHA+LG  
Sbjct: 110 RTMAVNVRGAAAFIKHAARSMVASGTRGSIVCTTSVTAEIG-GPGPHSYTASKHALLGLV 169

Query: 121 ----------DVRVNCVSPHGLATPLACRSLYMEES--EIEEFFSSKASLKGVVLKASHI 180
                      +RVN V+P+G+AT L   + Y EE+   +E++ S+ A LKGVVLKA H+
Sbjct: 170 RSACGGLGKYGIRVNGVAPYGVATGL---TSYNEETVKMVEDYCSATAILKGVVLKARHV 229

Query: 181 AEAVMFLASDESVYISGQNLIIDGGFTAVK 197
           A+A +FLASD+SVYISGQNL +DGG++ VK
Sbjct: 230 ADAALFLASDDSVYISGQNLGVDGGYSVVK 255

[Close]

BLAST of MELO3C023621 vs. TAIR 10
Match: AT3G29250.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 181.8 bits (460), Expect = 5.4e-46
Identity = 105/212 (49.53%), Postives = 139/212 (65.57%), Query Frame = 0


Query: 1   MSIGVDQVSFHHCDVRDEKQVEETVTYTIEKHGHLDILVSNAGTAEKPSSILELDMSNVD 60
           +SIG+D+ SF+ C+V DE  VE  V +T+EKHG LD+L SNAG  E   S+L+LD+   D
Sbjct: 88  VSIGLDKASFYRCNVTDETDVENAVKFTVEKHGKLDVLFSNAGVLEAFGSVLDLDLEAFD 147

Query: 61  NVFSTNVRGVLATIKHAGGAMVKQEIRGSIICMGSTTSVLSLYTSLA--AYTSSKHAVLG 120
              + NVRG  A IKHA  +MV    RGSI+C   TTS+ +        +YT+SKHA+LG
Sbjct: 148 RTMAVNVRGAAAFIKHAARSMVASGTRGSIVC---TTSIAAEIGGPGPHSYTASKHALLG 207

Query: 121 ------------DVRVNCVSPHGLATPLACRSLYMEES--EIEEFFSSKASLKGVVLKAS 180
                        +RVN V+P+G+AT +   S Y EE+   +EE+  +  +LKGVVLKA 
Sbjct: 208 LIRSACAGLGQYGIRVNGVAPYGVATGMT--SAYNEEAVKMLEEYGEALGNLKGVVLKAR 267

Query: 181 HIAEAVMFLASDESVYISGQNLIIDGGFTAVK 197
           HIAEA +FLASD+SVYISGQNL++DGGF+ VK
Sbjct: 268 HIAEAALFLASDDSVYISGQNLVVDGGFSVVK 294

[Close]

BLAST of MELO3C023621 vs. TAIR 10
Match: AT3G29250.2 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 181.8 bits (460), Expect = 5.4e-46
Identity = 105/212 (49.53%), Postives = 139/212 (65.57%), Query Frame = 0


Query: 1   MSIGVDQVSFHHCDVRDEKQVEETVTYTIEKHGHLDILVSNAGTAEKPSSILELDMSNVD 60
           +SIG+D+ SF+ C+V DE  VE  V +T+EKHG LD+L SNAG  E   S+L+LD+   D
Sbjct: 50  VSIGLDKASFYRCNVTDETDVENAVKFTVEKHGKLDVLFSNAGVLEAFGSVLDLDLEAFD 109

Query: 61  NVFSTNVRGVLATIKHAGGAMVKQEIRGSIICMGSTTSVLSLYTSLA--AYTSSKHAVLG 120
              + NVRG  A IKHA  +MV    RGSI+C   TTS+ +        +YT+SKHA+LG
Sbjct: 110 RTMAVNVRGAAAFIKHAARSMVASGTRGSIVC---TTSIAAEIGGPGPHSYTASKHALLG 169

Query: 121 ------------DVRVNCVSPHGLATPLACRSLYMEES--EIEEFFSSKASLKGVVLKAS 180
                        +RVN V+P+G+AT +   S Y EE+   +EE+  +  +LKGVVLKA 
Sbjct: 170 LIRSACAGLGQYGIRVNGVAPYGVATGMT--SAYNEEAVKMLEEYGEALGNLKGVVLKAR 229

Query: 181 HIAEAVMFLASDESVYISGQNLIIDGGFTAVK 197
           HIAEA +FLASD+SVYISGQNL++DGGF+ VK
Sbjct: 230 HIAEAALFLASDDSVYISGQNLVVDGGFSVVK 256

[Close]

BLAST of MELO3C023621 vs. TAIR 10
Match: AT2G47130.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 179.9 bits (455), Expect = 2.0e-45
Identity = 102/214 (47.66%), Postives = 140/214 (65.42%), Query Frame = 0


Query: 1   MSIGVDQVSFHHCDVRDEKQVEETVTYTIEKHGHLDILVSNAGTAEKPSSILELDMSNVD 60
           +S+G D+ SF+ CDV +EK+VE  V +T+EK+G LD+L SNAG  E+P S L+L++   D
Sbjct: 50  VSVGKDKASFYRCDVTNEKEVENAVKFTVEKYGKLDVLFSNAGVMEQPGSFLDLNLEQFD 109

Query: 61  NVFSTNVRGVLATIKHAGGAMVKQEIRGSIICMGSTTSVLSLYTSLA--AYTSSKHAVLG 120
              + NVRG  A IKHA  AMV++  RGSI+C   TTSV S        AYT+SKHA+LG
Sbjct: 110 RTMAVNVRGAAAFIKHAARAMVEKGTRGSIVC---TTSVASEIGGPGPHAYTASKHALLG 169

Query: 121 ------------DVRVNCVSPHGLATPLACRSLYMEES--EIEEFFSSKASLKGVVLKAS 180
                        +RVN V+P+ +AT +  R    EE+   +EE+ ++   LKGVVLKA 
Sbjct: 170 LVKSACGGLGKYGIRVNGVAPYAVATAINSRD---EETVRMVEEYSAATGILKGVVLKAR 229

Query: 181 HIAEAVMFLASDESVYISGQNLIIDGGFTAVKSL 199
           H+AEA +FLASD+S Y+SGQNL +DGG++ VK +
Sbjct: 230 HVAEAALFLASDDSAYVSGQNLAVDGGYSVVKPI 257

The following BLAST results are available for this feature:

BLAST of MELO3C023621 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461399.1	1.4e-83	80.86	PREDICTED: short-chain dehydrogenase reductase 3b-like [Cucumis melo] >KAA005854...	[more]
XP_004135968.1	4.8e-81	78.95	short-chain dehydrogenase reductase 3b [Cucumis sativus] >KGN45051.1 hypothetica...	[more]
XP_038899160.1	1.4e-72	71.29	short-chain dehydrogenase reductase 3b-like [Benincasa hispida]	[more]
XP_023547820.1	5.0e-70	70.33	short-chain dehydrogenase reductase 3b-like [Cucurbita pepo subsp. pepo]	[more]
XP_038898766.1	1.1e-69	68.90	short-chain dehydrogenase reductase 3b-like [Benincasa hispida]	[more]

BLAST of MELO3C023621 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94K41	1.5e-48	49.52	Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana OX=3702 GN=SDR3b ...	[more]
F4J300	4.4e-45	49.05	Short-chain dehydrogenase reductase 5 OS=Arabidopsis thaliana OX=3702 GN=SDR5 PE...	[more]
F4J2Z7	7.6e-45	49.53	Short-chain dehydrogenase reductase 4 OS=Arabidopsis thaliana OX=3702 GN=SDR4 PE...	[more]
O80713	2.9e-44	47.66	Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana OX=3702 GN=SDR3a ...	[more]
O80714	1.9e-43	46.38	Short-chain dehydrogenase reductase 3c OS=Arabidopsis thaliana OX=3702 GN=SDR3c ...	[more]

BLAST of MELO3C023621 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UYG2	6.6e-84	80.86	Short-chain dehydrogenase reductase 3b-like OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CF22	6.6e-84	80.86	short-chain dehydrogenase reductase 3b-like OS=Cucumis melo OX=3656 GN=LOC103499...	[more]
A0A0A0KBA9	2.3e-81	78.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G414480 PE=4 SV=1	[more]
A0A6J1GMR7	1.3e-68	68.90	short-chain dehydrogenase reductase 3b-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1GMK5	2.3e-68	67.94	short-chain dehydrogenase reductase 3b-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of MELO3C023621 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47140.1	1.0e-49	49.52	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G29260.1	3.2e-46	49.05	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G29250.1	5.4e-46	49.53	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G29250.2	5.4e-46	49.53	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT2G47130.1	2.0e-45	47.66	NAD(P)-binding Rossmann-fold superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00081	GDHRDH	coord: 33..44 score: 57.06 coord: 82..98 score: 26.66 coord: 109..128 score: 26.04 coord: 156..176 score: 31.18
None	No IPR available	PFAM	PF13561	adh_short_C2	coord: 9..193 e-value: 1.8E-39 score: 135.7
None	No IPR available	GENE3D	3.40.50.720		coord: 2..197 e-value: 1.4E-46 score: 160.7
None	No IPR available	PANTHER	PTHR42820:SF16	SHORT-CHAIN DEHYDROGENASE REDUCTASE 3B	coord: 2..197
None	No IPR available	PANTHER	PTHR42820	SHORT-CHAIN DEHYDROGENASE REDUCTASE	coord: 2..197
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 7..194

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C023621.1	MELO3C023621.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016491	oxidoreductase activity