MELO3C023604 (gene) Melon (DHL92) v4

Overview


Name	MELO3C023604
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Glutathione transport system permease gsiD
Location	chr01: 32390067 .. 32391037 (-)
RNA-Seq Expression	MELO3C023604
Synteny	MELO3C023604

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAAAAGTTAAAAAAGATAAAAATAAAGATAAAAGATTCTCTATCGTTCACTCACATTCCTTCCTCACCTTTCCTCTTCATCTTCGTCATCTTCGTCAAGGTTGAGAAATTCCTTAAAAATGGCGTAACAAGCACTTCTCCATCTCTCCGCCCCTAAAAAATCTACTTCCACTATGAATTCTATTTTCTCCTCCATTGAATTCCGTCTTCTACCATCACCAAATCCACCACAACCACAACATAATCTCCACATCTTCCACCAAATTCATCTTTCTCCTCAAACGACCTACCGTTTCAATTCAATAAAGACCAATTCAATTCTTCCAACTAATTCTTTAATTCTTGGAAACAGCACTATTCCTCCGGCACAATCCGGCGACATTTCTGTCCTACTCCAGACAAGGTTAGCCAAATTTCTCCTTTGTTTAAATTTGGATAACCGATGCACAAAGTACTGAGAAGAACTAATATATGAGACAATTAATCTCTTAAAATTTCTTAAATATATATATATATATTTGGGTAATTTGTGCAGCGGCGTACTTCTGATTGCGTATTTGATAGCGAATTTCATTTTCCCGGAGTTTATTATGAAGTCATACCGATCTGATGATGAGAGCGAGGGGAAGGGTGGGGGTGGAAGATGAAGAATCAAGCGGAGGGAGGAAGAAGCTTCATTTTATATTTGTGTGTAAGAAAATTGGGATAATATTATTGGGTTCACTGATTTTATTTTCCCATTTTGATTGAAAAGGGTAGTTCTTGTAGTTTATTTTTGAAAAATTTCAGACATATTTGTGGAAAGTAGAAGATGAAGATGAAAGGTGGGGAGAGGAAGAGAGAAAGGATAAGAAATGAGTTCCCATGAGAAAAAAAATTGTTAACTAAACTCTTCTTAAAATGTCCATTTGTTACTCTCTATTTTTTTTTTTTATTATTATTATTAAATTATAAAACTATTTAATTTTCA

mRNA sequence

TTTAAAAGTTAAAAAAGATAAAAATAAAGATAAAAGATTCTCTATCGTTCACTCACATTCCTTCCTCACCTTTCCTCTTCATCTTCGTCATCTTCGTCAAGGTTGAGAAATTCCTTAAAAATGGCGTAACAAGCACTTCTCCATCTCTCCGCCCCTAAAAAATCTACTTCCACTATGAATTCTATTTTCTCCTCCATTGAATTCCGTCTTCTACCATCACCAAATCCACCACAACCACAACATAATCTCCACATCTTCCACCAAATTCATCTTTCTCCTCAAACGACCTACCGTTTCAATTCAATAAAGACCAATTCAATTCTTCCAACTAATTCTTTAATTCTTGGAAACAGCACTATTCCTCCGGCACAATCCGGCGACATTTCTGTCCTACTCCAGACAAGCGGCGTACTTCTGATTGCGTATTTGATAGCGAATTTCATTTTCCCGGAGTTTATTATGAAGTCATACCGATCTGATGATGAGAGCGAGGGGAAGGGTGGGGGTGGAAGATGAAGAATCAAGCGGAGGGAGGAAGAAGCTTCATTTTATATTTGTGTGTAAGAAAATTGGGATAATATTATTGGGTTCACTGATTTTATTTTCCCATTTTGATTGAAAAGGGTAGTTCTTGTAGTTTATTTTTGAAAAATTTCAGACATATTTGTGGAAAGTAGAAGATGAAGATGAAAGGTGGGGAGAGGAAGAGAGAAAGGATAAGAAATGAGTTCCCATGAGAAAAAAAATTGTTAACTAAACTCTTCTTAAAATGTCCATTTGTTACTCTCTATTTTTTTTTTTTATTATTATTATTAAATTATAAAACTATTTAATTTTCA

Coding sequence (CDS)

ATGAATTCTATTTTCTCCTCCATTGAATTCCGTCTTCTACCATCACCAAATCCACCACAACCACAACATAATCTCCACATCTTCCACCAAATTCATCTTTCTCCTCAAACGACCTACCGTTTCAATTCAATAAAGACCAATTCAATTCTTCCAACTAATTCTTTAATTCTTGGAAACAGCACTATTCCTCCGGCACAATCCGGCGACATTTCTGTCCTACTCCAGACAAGCGGCGTACTTCTGATTGCGTATTTGATAGCGAATTTCATTTTCCCGGAGTTTATTATGAAGTCATACCGATCTGATGATGAGAGCGAGGGGAAGGGTGGGGGTGGAAGATGA

Protein sequence

MNSIFSSIEFRLLPSPNPPQPQHNLHIFHQIHLSPQTTYRFNSIKTNSILPTNSLILGNSTIPPAQSGDISVLLQTSGVLLIAYLIANFIFPEFIMKSYRSDDESEGKGGGGR

Homology

[Close]

BLAST of MELO3C023604 vs. NCBI nr
Match: KAA0067693.1 (Glutathione transport system permease gsiD [Cucumis melo var. makuwa] >TYJ98706.1 Glutathione transport system permease gsiD [Cucumis melo var. makuwa])

HSP 1 Score: 224.9 bits (572), Expect = 3.4e-55
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MNSIFSSIEFRLLPSPNPPQPQHNLHIFHQIHLSPQTTYRFNSIKTNSILPTNSLILGNS 60
           MNSIFSSIEFRLLPSPNPPQPQHNLHIFHQIHLSPQTTYRFNSIKTNSILPTNSLILGNS
Sbjct: 1   MNSIFSSIEFRLLPSPNPPQPQHNLHIFHQIHLSPQTTYRFNSIKTNSILPTNSLILGNS 60

Query: 61  TIPPAQSGDISVLLQTSGVLLIAYLIANFIFPEFIMKSYRSDDESEGKGGGGR 114
           TIPPAQSGDISVLLQTSGVLLIAYLIANFIFPEFIMKSYRSDDESEGKGGGGR
Sbjct: 61  TIPPAQSGDISVLLQTSGVLLIAYLIANFIFPEFIMKSYRSDDESEGKGGGGR 113

[Close]

BLAST of MELO3C023604 vs. NCBI nr
Match: KGN45072.1 (hypothetical protein Csa_016451 [Cucumis sativus])

HSP 1 Score: 194.1 bits (492), Expect = 6.4e-46
Identity = 99/113 (87.61%), Postives = 107/113 (94.69%), Query Frame = 0


Query: 1   MNSIFSSIEFRLLPSPNPPQPQHNLHIFHQIHLSPQTTYRFNSIKTNSILPTNSLILGNS 60
           MNSIFSSI+FRLLPSPNP QPQHNLHIFHQI+L PQ T+RF+SIKTNSILPT SLILGNS
Sbjct: 1   MNSIFSSIQFRLLPSPNPRQPQHNLHIFHQIYLPPQITHRFSSIKTNSILPT-SLILGNS 60

Query: 61  TIPPAQSGDISVLLQTSGVLLIAYLIANFIFPEFIMKSYRSDDESEGKGGGGR 114
           TIPP+QSGDISVLL  SGVLLIAYL+ANFIFPEFIMKSYRSDDE++GKGGGGR
Sbjct: 61  TIPPSQSGDISVLLPISGVLLIAYLLANFIFPEFIMKSYRSDDENDGKGGGGR 112

[Close]

BLAST of MELO3C023604 vs. NCBI nr
Match: XP_038897194.1 (uncharacterized protein LOC120085329 [Benincasa hispida])

HSP 1 Score: 132.1 bits (331), Expect = 3.0e-27
Identity = 81/117 (69.23%), Postives = 90/117 (76.92%), Query Frame = 0


Query: 1   MNSIFSSIEFRLLPS---PNPPQPQH------NLHIFHQIHLSPQTTYRFNSIKTNSILP 60
           MN I SSIEF  L S   PN  QPQ       NLHIF  I++SPQ TYRF+S+K N+I  
Sbjct: 1   MNCISSSIEFPPLRSHLKPNRRQPQQNSPPKKNLHIFRHIYISPQ-TYRFDSLKVNAI-- 60

Query: 61  TNSLILGNSTIPPAQSGDISVLLQTSGVLLIAYLIANFIFPEFIMKSYRSDDESEGK 109
            +SLILGNSTIPP+QSGD+SVLLQT GVLLIAYLIANFI PEFIMKSYRS DES+GK
Sbjct: 61  PSSLILGNSTIPPSQSGDVSVLLQTGGVLLIAYLIANFILPEFIMKSYRS-DESDGK 113

[Close]

BLAST of MELO3C023604 vs. NCBI nr
Match: XP_022940449.1 (uncharacterized protein LOC111446047 [Cucurbita moschata] >KAG7037370.1 hypothetical protein SDJN02_00995 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 107.8 bits (268), Expect = 6.0e-20
Identity = 70/112 (62.50%), Postives = 82/112 (73.21%), Query Frame = 0


Query: 1   MNSIFSSIEFRLLPS---PNPPQ-PQHNLHIFHQIHLSPQTTYRFNSIKTNSILPTNSLI 60
           MN I S+IE  +L S   PN  Q  Q+N     +I++SPQ+  RF S+  N+I   NSL+
Sbjct: 18  MNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQSN-RFASLTANAI--PNSLV 77

Query: 61  LGNSTIPPAQSGDISVLLQTSGVLLIAYLIANFIFPEFIMKSYRSDDESEGK 109
           L NSTIPP+QSGD+SVLLQTSGVLLI YLIANFI PEFIMKSY S DESEGK
Sbjct: 78  LANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSY-STDESEGK 125

[Close]

BLAST of MELO3C023604 vs. NCBI nr
Match: KAG6585878.1 (hypothetical protein SDJN03_18611, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 107.8 bits (268), Expect = 6.0e-20
Identity = 70/112 (62.50%), Postives = 82/112 (73.21%), Query Frame = 0


Query: 1   MNSIFSSIEFRLLPS---PNPPQ-PQHNLHIFHQIHLSPQTTYRFNSIKTNSILPTNSLI 60
           MN I S+IE  +L S   PN  Q  Q+N     +I++SPQ+  RF S+  N+I   NSL+
Sbjct: 18  MNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQSN-RFASLTANAI--PNSLV 77

Query: 61  LGNSTIPPAQSGDISVLLQTSGVLLIAYLIANFIFPEFIMKSYRSDDESEGK 109
           L NSTIPP+QSGD+SVLLQTSGVLLI YLIANFI PEFIMKSY S DESEGK
Sbjct: 78  LANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSY-STDESEGK 125

[Close]

BLAST of MELO3C023604 vs. ExPASy TrEMBL
Match: A0A5D3BI04 (Glutathione transport system permease gsiD OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27427G00010 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.6e-55
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MNSIFSSIEFRLLPSPNPPQPQHNLHIFHQIHLSPQTTYRFNSIKTNSILPTNSLILGNS 60
           MNSIFSSIEFRLLPSPNPPQPQHNLHIFHQIHLSPQTTYRFNSIKTNSILPTNSLILGNS
Sbjct: 1   MNSIFSSIEFRLLPSPNPPQPQHNLHIFHQIHLSPQTTYRFNSIKTNSILPTNSLILGNS 60

Query: 61  TIPPAQSGDISVLLQTSGVLLIAYLIANFIFPEFIMKSYRSDDESEGKGGGGR 114
           TIPPAQSGDISVLLQTSGVLLIAYLIANFIFPEFIMKSYRSDDESEGKGGGGR
Sbjct: 61  TIPPAQSGDISVLLQTSGVLLIAYLIANFIFPEFIMKSYRSDDESEGKGGGGR 113

[Close]

BLAST of MELO3C023604 vs. ExPASy TrEMBL
Match: A0A0A0K9M2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G420170 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 3.1e-46
Identity = 99/113 (87.61%), Postives = 107/113 (94.69%), Query Frame = 0


Query: 1   MNSIFSSIEFRLLPSPNPPQPQHNLHIFHQIHLSPQTTYRFNSIKTNSILPTNSLILGNS 60
           MNSIFSSI+FRLLPSPNP QPQHNLHIFHQI+L PQ T+RF+SIKTNSILPT SLILGNS
Sbjct: 1   MNSIFSSIQFRLLPSPNPRQPQHNLHIFHQIYLPPQITHRFSSIKTNSILPT-SLILGNS 60

Query: 61  TIPPAQSGDISVLLQTSGVLLIAYLIANFIFPEFIMKSYRSDDESEGKGGGGR 114
           TIPP+QSGDISVLL  SGVLLIAYL+ANFIFPEFIMKSYRSDDE++GKGGGGR
Sbjct: 61  TIPPSQSGDISVLLPISGVLLIAYLLANFIFPEFIMKSYRSDDENDGKGGGGR 112

[Close]

BLAST of MELO3C023604 vs. ExPASy TrEMBL
Match: A0A6J1FK57 (uncharacterized protein LOC111446047 OS=Cucurbita moschata OX=3662 GN=LOC111446047 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.9e-20
Identity = 70/112 (62.50%), Postives = 82/112 (73.21%), Query Frame = 0


Query: 1   MNSIFSSIEFRLLPS---PNPPQ-PQHNLHIFHQIHLSPQTTYRFNSIKTNSILPTNSLI 60
           MN I S+IE  +L S   PN  Q  Q+N     +I++SPQ+  RF S+  N+I   NSL+
Sbjct: 18  MNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQSN-RFASLTANAI--PNSLV 77

Query: 61  LGNSTIPPAQSGDISVLLQTSGVLLIAYLIANFIFPEFIMKSYRSDDESEGK 109
           L NSTIPP+QSGD+SVLLQTSGVLLI YLIANFI PEFIMKSY S DESEGK
Sbjct: 78  LANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSY-STDESEGK 125

[Close]

BLAST of MELO3C023604 vs. ExPASy TrEMBL
Match: A0A6J1J030 (uncharacterized protein LOC111480699 OS=Cucurbita maxima OX=3661 GN=LOC111480699 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 3.6e-18
Identity = 69/112 (61.61%), Postives = 80/112 (71.43%), Query Frame = 0


Query: 1   MNSIFSSIEFRLLPS---PNPPQ-PQHNLHIFHQIHLSPQTTYRFNSIKTNSILPTNSLI 60
           MN I S+IE  +L S   PN  Q  Q+N      I++SPQ+  RF S+  N+I   NSL+
Sbjct: 27  MNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPPIYISPQSN-RFASLTANAI--PNSLV 86

Query: 61  LGNSTIPPAQSGDISVLLQTSGVLLIAYLIANFIFPEFIMKSYRSDDESEGK 109
           L N TIPP+QSGD+SVLLQTSGVLLI YLIANFI PEFIMKSY S DESEGK
Sbjct: 87  LAN-TIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSY-STDESEGK 133

[Close]

BLAST of MELO3C023604 vs. ExPASy TrEMBL
Match: B9SV97 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1303160 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 7.5e-08
Identity = 39/70 (55.71%), Postives = 47/70 (67.14%), Query Frame = 0


Query: 40  RFNSIKTNSILPTNSLILGNSTIPPAQSGDISVLLQTSGVLLIAYLIANFIFPEFIMKSY 99
           R  S++TN++   N LIL  ST  PAQ GDISVLL T G+LL  Y IANF+ P FI KS+
Sbjct: 40  RVLSVRTNAV--PNPLILAEST-SPAQGGDISVLLPTGGLLLFVYGIANFVVPFFISKSF 99

Query: 100 RSDDESEGKG 110
            SD E+E  G
Sbjct: 100 ESDKETEDSG 106

[Close]

BLAST of MELO3C023604 vs. TAIR 10
Match: AT1G50732.1 (unknown protein. )

HSP 1 Score: 48.5 bits (114), Expect = 4.1e-06
Identity = 19/47 (40.43%), Postives = 31/47 (65.96%), Query Frame = 0


Query: 60  STIPPAQSGDISVLLQTSGVLLIAYLIANFIFPEFIMKSYRSDDESE 107
           S +PP++SGDI+  L  SG ++  YL+ NF+ P  + KS + ++E E
Sbjct: 67  SVLPPSESGDITTFLFVSGAMISMYLVTNFLVPSLLFKSLQGEEEEE 113

The following BLAST results are available for this feature:

BLAST of MELO3C023604 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067693.1	3.4e-55	100.00	Glutathione transport system permease gsiD [Cucumis melo var. makuwa] >TYJ98706....	[more]
KGN45072.1	6.4e-46	87.61	hypothetical protein Csa_016451 [Cucumis sativus]	[more]
XP_038897194.1	3.0e-27	69.23	uncharacterized protein LOC120085329 [Benincasa hispida]	[more]
XP_022940449.1	6.0e-20	62.50	uncharacterized protein LOC111446047 [Cucurbita moschata] >KAG7037370.1 hypothet...	[more]
KAG6585878.1	6.0e-20	62.50	hypothetical protein SDJN03_18611, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MELO3C023604 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C023604 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BI04	1.6e-55	100.00	Glutathione transport system permease gsiD OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0K9M2	3.1e-46	87.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G420170 PE=4 SV=1	[more]
A0A6J1FK57	2.9e-20	62.50	uncharacterized protein LOC111446047 OS=Cucurbita moschata OX=3662 GN=LOC1114460...	[more]
A0A6J1J030	3.6e-18	61.61	uncharacterized protein LOC111480699 OS=Cucurbita maxima OX=3661 GN=LOC111480699...	[more]
B9SV97	7.5e-08	55.71	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1303160 PE=4 SV=1	[more]

BLAST of MELO3C023604 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50732.1	4.1e-06	40.43	unknown protein.	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37196	TRANSMEMBRANE PROTEIN	coord: 20..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C023604.1	MELO3C023604.1	mRNA