MELO3C023583 (gene) Melon (DHL92) v4

Overview


Name	MELO3C023583
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
Location	chr01: 32539079 .. 32541168 (-)
RNA-Seq Expression	MELO3C023583
Synteny	MELO3C023583

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAACAGAAAATGTTAAATGTTATTTAGAAAAACGATCAAATAATATTATTTTCCGAAGAGAGCATTTAAAAGAAAGAAGCCATAGGTTTTTCTCATAAACCCTAATTCTACTTTGGAGAAGAATTTCGGAGGAAGAAGATGACTCAGAAAGCAAATCTATTCAAAGGTAAACAGAAGAGGAAAACCATTCCTCCCAATCGCCATGGAAAAATCCCCCAAACTCGCAAAGGTATCTCTTTTCTTCTTTTTTCCACCTCCCCCTCTTTCATATGCTCCATTTACGCCTCTAAATTACGATTTCTCCTCCGTATTCATTCCCCGTTGTCTTTCCAGGGAAAAGATTTGTGAAGCCATCAAAGACTACCAAAGAGATGGAAACAGATCGGGTACGTGTTCTCTTTTTCGTGCTTGTTCAATAGTTTATGTGGGATTTAGTGACCGTGAGAGTGGAAACTTATGCTCATAAGTTGTCTTGTTGCGATTCAGCATCTTTAATGTTTCAAATGCTATTTTCTAGCTTCCATATTAACAGTGTTATACTAGATGAAGTGACCATCTACTGTTAAATACTGTTCGAAAAATTTAGCATTTAGATGCAACCGAACTTAAAGTATCGAAATTTTTAAGGTTGTGTGTTGGGTAAATGTTGATAGCCCTGGTTGATAGGTTGCAATTCGGGTGAACTATTTGAAGCATCCATCGTTTCCGCTAGCTAAGAGTGGATTTTGTGTATGATTCTTAAGCCCTCTCCTCTTAGCTGAACTTGGTAGTTGATAGTTCTCAGTTAATATCAAAATTCACTGTGTTTAGTATCTTCCCGTTGACTGTGCTGGAGACTTAGAGCAGTCGTTGGTATGAAAATTATATTGGTGAATGAGAAATTGCAAAGCTTTCAAAAAGGGAAAGGCTACTTGTTAATGAAAGTTATGTTCCTTTTTTAGGAATGATCTCTTGTGCCAATAGAGGAATTCCATTTTGTTGGACAGAAAAATGGTTAAGAAATTAAGCAACATTGTGCAAGGCCACAAGGGAGTGTTTTTGGGTTTGAATAAATTACCAACTACTAAACTATGAGATGGTTGGTAGACCGAGAACCCATACAGTAGAAATGCTATTCAAAACTTGATTCGAATGGAGTCGATTTTGTATATGCATTTGAAATTTAGTATGAATTGTTTTTCTTTTATCTCAAACTGGGACACTTGCCAAACATTGTTCTTGTTGTAATGTTGGTGTTCACCTTTAATATCTCCTGTTCTTTGTATAGGGGAAGGGTTAATTTCCTTGAACTTGTATTAAATTCCCTAGCATATAGGAGAAGTTAATTCTTAGTAGAGAGAAAAGAAGAAGAATCTTTTGTTTGTAATTCATTGGTTGTCTCCCCCTCTTCAAAGTTGAAACTATTTATGCTAATGGAAGGTTTTACTTCATATCATACAAAGTTATCGATTGACTGATAATTGTCTTGTATTTGCATGATGCTATAATGTTTGTCTTATATTTGTGATGTTATTATCCGCAAGTGTTTGCTATTATCTCCTGTTTGCTATTATCCGCAAGTGTTTTAGCAAACAAGGAAGTAAATTACCAAGTGTTTGCTATTATCTCAAACAGGAAGTAAGCAAGTTTATAAATTACTGCAACGAAACAAAGGCGGCTACTTTAGCAAACAAGGAAGGTGGGCAGTTGAGTATTGTGAAAACTCCAGCAAATGCGGATAATAGTAATGCAAAGAAAGAGTAGAGAACAATTCAGACTTGTTAGTGTTACAATATTGTGAAATTATTTGTGATGTTATTCCTTTCTCCTTTCTTTTTCCATCCATTTTATCCCCACTCCGTTGAGAAGGTGAAAATGATGTGTTGAGTTCGTCTTCTTCTAACGCAGTTCTCAATTTTGTTAGGAGTCAATGATTTATATATTATATTTTTGTTTTTACTTTTGTAAGAATAGCATATGCAGAAATCAAGAGAAAAGACCAATCACAAATTTGGTCACTTTTTTGTTTGATCAAAATGCAAACAAGATCAAAAGTTGAATTTTTTTGTGAACCCTTTTTGCAGTTCTCAATTTTAATAGTTGATTGA

mRNA sequence

AAAAAACAGAAAATGTTAAATGTTATTTAGAAAAACGATCAAATAATATTATTTTCCGAAGAGAGCATTTAAAAGAAAGAAGCCATAGGTTTTTCTCATAAACCCTAATTCTACTTTGGAGAAGAATTTCGGAGGAAGAAGATGACTCAGAAAGCAAATCTATTCAAAGGTAAACAGAAGAGGAAAACCATTCCTCCCAATCGCCATGGAAAAATCCCCCAAACTCGCAAAGGGAAAAGATTTGTGAAGCCATCAAAGACTACCAAAGAGATGGAAACAGATCGGTATCTTCCCGTTGACTGTGCTGGAGACTTAGAGCAGTCGTTGGAAGTAAGCAAGTTTATAAATTACTGCAACGAAACAAAGGCGGCTACTTTAGCAAACAAGGAAGGTGGGCAGTTGAGTATTGTGAAAACTCCAGCAAATGCGGATAATAGTAATGCAAAGAAAGAGTAGAGAACAATTCAGACTTGTTAGTGTTACAATATTGTGAAATTATTTGTGATGTTATTCCTTTCTCCTTTCTTTTTCCATCCATTTTATCCCCACTCCGTTGAGAAGGTGAAAATGATGTGTTGAGTTCGTCTTCTTCTAACGCAGTTCTCAATTTTGTTAGGAGTCAATGATTTATATATTATATTTTTGTTTTTACTTTTGTAAGAATAGCATATGCAGAAATCAAGAGAAAAGACCAATCACAAATTTGGTCACTTTTTTGTTTGATCAAAATGCAAACAAGATCAAAAGTTGAATTTTTTTGTGAACCCTTTTTGCAGTTCTCAATTTTAATAGTTGATTGA

Coding sequence (CDS)

ATGACTCAGAAAGCAAATCTATTCAAAGGTAAACAGAAGAGGAAAACCATTCCTCCCAATCGCCATGGAAAAATCCCCCAAACTCGCAAAGGGAAAAGATTTGTGAAGCCATCAAAGACTACCAAAGAGATGGAAACAGATCGGTATCTTCCCGTTGACTGTGCTGGAGACTTAGAGCAGTCGTTGGAAGTAAGCAAGTTTATAAATTACTGCAACGAAACAAAGGCGGCTACTTTAGCAAACAAGGAAGGTGGGCAGTTGAGTATTGTGAAAACTCCAGCAAATGCGGATAATAGTAATGCAAAGAAAGAGTAG

Protein sequence

MTQKANLFKGKQKRKTIPPNRHGKIPQTRKGKRFVKPSKTTKEMETDRYLPVDCAGDLEQSLEVSKFINYCNETKAATLANKEGGQLSIVKTPANADNSNAKKE

Homology

[Close]

BLAST of MELO3C023583 vs. NCBI nr
Match: XP_008461352.1 (PREDICTED: uncharacterized protein LOC103499958 [Cucumis melo] >KAA0058587.1 uncharacterized protein E6C27_scaffold339G00540 [Cucumis melo var. makuwa] >TYK10387.1 uncharacterized protein E5676_scaffold459G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 167.5 bits (423), Expect = 5.9e-38
Identity = 90/104 (86.54%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 1   MTQKANLFKGKQKRKTIPPNRHGKIPQTRKGKRFVKPSKTTKEMETDRYLPVDCAGDLEQ 60
           MTQKANLFKGKQKRKTIPPNRHGKIPQTRKGKRFVKPSKTTKEMETDR            
Sbjct: 1   MTQKANLFKGKQKRKTIPPNRHGKIPQTRKGKRFVKPSKTTKEMETDR------------ 60

Query: 61  SLEVSKFINYCNETKAATLANKEGGQLSIVKTPANADNSNAKKE 105
             EVSKFINYCNETKAATLANKEGGQLSIVKTPANADNSNAKKE
Sbjct: 61  --EVSKFINYCNETKAATLANKEGGQLSIVKTPANADNSNAKKE 90

[Close]

BLAST of MELO3C023583 vs. NCBI nr
Match: XP_004135948.1 (uncharacterized protein LOC101210742 [Cucumis sativus] >KGN45093.1 hypothetical protein Csa_016027 [Cucumis sativus])

HSP 1 Score: 165.2 bits (417), Expect = 2.9e-37
Identity = 89/104 (85.58%), Postives = 89/104 (85.58%), Query Frame = 0


Query: 1   MTQKANLFKGKQKRKTIPPNRHGKIPQTRKGKRFVKPSKTTKEMETDRYLPVDCAGDLEQ 60
           MTQKANLFKGKQK KTIPPNRHGKIPQTRKGKRFVKPSKTTKEMETDR            
Sbjct: 1   MTQKANLFKGKQKTKTIPPNRHGKIPQTRKGKRFVKPSKTTKEMETDR------------ 60

Query: 61  SLEVSKFINYCNETKAATLANKEGGQLSIVKTPANADNSNAKKE 105
             EVSKFINYCNETKAATLANKEGGQLSIVKTPANADNSNAKKE
Sbjct: 61  --EVSKFINYCNETKAATLANKEGGQLSIVKTPANADNSNAKKE 90

[Close]

BLAST of MELO3C023583 vs. NCBI nr
Match: XP_038897231.1 (uncharacterized protein LOC120085359 [Benincasa hispida])

HSP 1 Score: 158.7 bits (400), Expect = 2.7e-35
Identity = 85/104 (81.73%), Postives = 88/104 (84.62%), Query Frame = 0


Query: 1   MTQKANLFKGKQKRKTIPPNRHGKIPQTRKGKRFVKPSKTTKEMETDRYLPVDCAGDLEQ 60
           MTQKANLFKG+QKRKTIPPNRHGKIPQTRKGKRFVKPSKTTKEMETDR            
Sbjct: 1   MTQKANLFKGQQKRKTIPPNRHGKIPQTRKGKRFVKPSKTTKEMETDR------------ 60

Query: 61  SLEVSKFINYCNETKAATLANKEGGQLSIVKTPANADNSNAKKE 105
             EVSKFINYCNETKAATLANKEGGQLSIVKTP++  NSNAKKE
Sbjct: 61  --EVSKFINYCNETKAATLANKEGGQLSIVKTPSDTGNSNAKKE 90

[Close]

BLAST of MELO3C023583 vs. NCBI nr
Match: XP_022145051.1 (uncharacterized protein LOC111014568 [Momordica charantia])

HSP 1 Score: 149.4 bits (376), Expect = 1.7e-32
Identity = 80/104 (76.92%), Postives = 85/104 (81.73%), Query Frame = 0


Query: 1   MTQKANLFKGKQKRKTIPPNRHGKIPQTRKGKRFVKPSKTTKEMETDRYLPVDCAGDLEQ 60
           MTQKAN FKG+QKRKTIPPNRHGK+PQTRKGKRFVKPSK TKEMETDR            
Sbjct: 1   MTQKANQFKGQQKRKTIPPNRHGKVPQTRKGKRFVKPSKITKEMETDR------------ 60

Query: 61  SLEVSKFINYCNETKAATLANKEGGQLSIVKTPANADNSNAKKE 105
             E+SKFINYCNETKAATLANKEGGQLSIVK P +A NS+AKKE
Sbjct: 61  --ELSKFINYCNETKAATLANKEGGQLSIVKAPLDAGNSSAKKE 90

[Close]

BLAST of MELO3C023583 vs. NCBI nr
Match: KAG6575705.1 (hypothetical protein SDJN03_26344, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 142.9 bits (359), Expect = 1.6e-30
Identity = 80/106 (75.47%), Postives = 85/106 (80.19%), Query Frame = 0


Query: 1   MTQKANLFKGKQKRKTIPPNRHGKIPQTRKGKRFVKPSKTTKEMETDRYLPVDCAGDLEQ 60
           MTQKA LFKG+QKRKTIPPNRHGKIPQTRKGKR VKPSKTTKEMETDR            
Sbjct: 1   MTQKATLFKGQQKRKTIPPNRHGKIPQTRKGKRVVKPSKTTKEMETDR------------ 60

Query: 61  SLEVSKFINYCNETKAATLANKEGGQLSIVKTPANA---DNSNAKK 104
             E+SKFINYCNETKAATLANKEGGQLSIVKTP++A    N+ AKK
Sbjct: 61  --ELSKFINYCNETKAATLANKEGGQLSIVKTPSDAGGNSNNAAKK 92

[Close]

BLAST of MELO3C023583 vs. ExPASy TrEMBL
Match: A0A5A7UV30 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00290 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.9e-38
Identity = 90/104 (86.54%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 1   MTQKANLFKGKQKRKTIPPNRHGKIPQTRKGKRFVKPSKTTKEMETDRYLPVDCAGDLEQ 60
           MTQKANLFKGKQKRKTIPPNRHGKIPQTRKGKRFVKPSKTTKEMETDR            
Sbjct: 1   MTQKANLFKGKQKRKTIPPNRHGKIPQTRKGKRFVKPSKTTKEMETDR------------ 60

Query: 61  SLEVSKFINYCNETKAATLANKEGGQLSIVKTPANADNSNAKKE 105
             EVSKFINYCNETKAATLANKEGGQLSIVKTPANADNSNAKKE
Sbjct: 61  --EVSKFINYCNETKAATLANKEGGQLSIVKTPANADNSNAKKE 90

[Close]

BLAST of MELO3C023583 vs. ExPASy TrEMBL
Match: A0A1S3CE62 (uncharacterized protein LOC103499958 OS=Cucumis melo OX=3656 GN=LOC103499958 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.9e-38
Identity = 90/104 (86.54%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 1   MTQKANLFKGKQKRKTIPPNRHGKIPQTRKGKRFVKPSKTTKEMETDRYLPVDCAGDLEQ 60
           MTQKANLFKGKQKRKTIPPNRHGKIPQTRKGKRFVKPSKTTKEMETDR            
Sbjct: 1   MTQKANLFKGKQKRKTIPPNRHGKIPQTRKGKRFVKPSKTTKEMETDR------------ 60

Query: 61  SLEVSKFINYCNETKAATLANKEGGQLSIVKTPANADNSNAKKE 105
             EVSKFINYCNETKAATLANKEGGQLSIVKTPANADNSNAKKE
Sbjct: 61  --EVSKFINYCNETKAATLANKEGGQLSIVKTPANADNSNAKKE 90

[Close]

BLAST of MELO3C023583 vs. ExPASy TrEMBL
Match: A0A0A0K6H9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G420860 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.4e-37
Identity = 89/104 (85.58%), Postives = 89/104 (85.58%), Query Frame = 0


Query: 1   MTQKANLFKGKQKRKTIPPNRHGKIPQTRKGKRFVKPSKTTKEMETDRYLPVDCAGDLEQ 60
           MTQKANLFKGKQK KTIPPNRHGKIPQTRKGKRFVKPSKTTKEMETDR            
Sbjct: 1   MTQKANLFKGKQKTKTIPPNRHGKIPQTRKGKRFVKPSKTTKEMETDR------------ 60

Query: 61  SLEVSKFINYCNETKAATLANKEGGQLSIVKTPANADNSNAKKE 105
             EVSKFINYCNETKAATLANKEGGQLSIVKTPANADNSNAKKE
Sbjct: 61  --EVSKFINYCNETKAATLANKEGGQLSIVKTPANADNSNAKKE 90

[Close]

BLAST of MELO3C023583 vs. ExPASy TrEMBL
Match: A0A6J1CV79 (uncharacterized protein LOC111014568 OS=Momordica charantia OX=3673 GN=LOC111014568 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 8.1e-33
Identity = 80/104 (76.92%), Postives = 85/104 (81.73%), Query Frame = 0


Query: 1   MTQKANLFKGKQKRKTIPPNRHGKIPQTRKGKRFVKPSKTTKEMETDRYLPVDCAGDLEQ 60
           MTQKAN FKG+QKRKTIPPNRHGK+PQTRKGKRFVKPSK TKEMETDR            
Sbjct: 1   MTQKANQFKGQQKRKTIPPNRHGKVPQTRKGKRFVKPSKITKEMETDR------------ 60

Query: 61  SLEVSKFINYCNETKAATLANKEGGQLSIVKTPANADNSNAKKE 105
             E+SKFINYCNETKAATLANKEGGQLSIVK P +A NS+AKKE
Sbjct: 61  --ELSKFINYCNETKAATLANKEGGQLSIVKAPLDAGNSSAKKE 90

[Close]

BLAST of MELO3C023583 vs. ExPASy TrEMBL
Match: A0A6J1JNC0 (uncharacterized protein LOC111488438 OS=Cucurbita maxima OX=3661 GN=LOC111488438 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 7.6e-31
Identity = 80/106 (75.47%), Postives = 85/106 (80.19%), Query Frame = 0


Query: 1   MTQKANLFKGKQKRKTIPPNRHGKIPQTRKGKRFVKPSKTTKEMETDRYLPVDCAGDLEQ 60
           MTQKA LFKG+QKRKTIPPNRHGKIPQTRKGKR VKPSKTTKEMETDR            
Sbjct: 1   MTQKATLFKGQQKRKTIPPNRHGKIPQTRKGKRVVKPSKTTKEMETDR------------ 60

Query: 61  SLEVSKFINYCNETKAATLANKEGGQLSIVKTPANA---DNSNAKK 104
             E+SKFINYCNETKAATLANKEGGQLSIVKTP++A    N+ AKK
Sbjct: 61  --ELSKFINYCNETKAATLANKEGGQLSIVKTPSDAAGNSNNAAKK 92

[Close]

BLAST of MELO3C023583 vs. TAIR 10
Match: AT3G52040.1 (unknown protein; Has 37 Blast hits to 37 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 104.8 bits (260), Expect = 4.4e-23
Identity = 58/99 (58.59%), Postives = 69/99 (69.70%), Query Frame = 0


Query: 1   MTQKANLFKGKQKRKTIPPNRHGKIPQTRKGKRFVKPSKTTKEMETDRYLPVDCAGDLEQ 60
           MTQK+N FKG+QKRKTI PNRHGK  QTRKGKR VKP+K TKEM+TDR            
Sbjct: 1   MTQKSNQFKGQQKRKTIAPNRHGKSIQTRKGKRNVKPTKMTKEMDTDR------------ 60

Query: 61  SLEVSKFINYCNETKAATLANKEGGQLSIVKTPANADNS 100
             E++KFIN+CNE KA   A KEGGQL+I+K  +  + S
Sbjct: 61  --ELTKFINHCNEVKATNAACKEGGQLNIIKAESQPEPS 85

The following BLAST results are available for this feature:

BLAST of MELO3C023583 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461352.1	5.9e-38	86.54	PREDICTED: uncharacterized protein LOC103499958 [Cucumis melo] >KAA0058587.1 unc...	[more]
XP_004135948.1	2.9e-37	85.58	uncharacterized protein LOC101210742 [Cucumis sativus] >KGN45093.1 hypothetical ...	[more]
XP_038897231.1	2.7e-35	81.73	uncharacterized protein LOC120085359 [Benincasa hispida]	[more]
XP_022145051.1	1.7e-32	76.92	uncharacterized protein LOC111014568 [Momordica charantia]	[more]
KAG6575705.1	1.6e-30	75.47	hypothetical protein SDJN03_26344, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MELO3C023583 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C023583 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UV30	2.9e-38	86.54	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CE62	2.9e-38	86.54	uncharacterized protein LOC103499958 OS=Cucumis melo OX=3656 GN=LOC103499958 PE=...	[more]
A0A0A0K6H9	1.4e-37	85.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G420860 PE=4 SV=1	[more]
A0A6J1CV79	8.1e-33	76.92	uncharacterized protein LOC111014568 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1JNC0	7.6e-31	75.47	uncharacterized protein LOC111488438 OS=Cucurbita maxima OX=3661 GN=LOC111488438...	[more]

BLAST of MELO3C023583 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52040.1	4.4e-23	58.59	unknown protein; Has 37 Blast hits to 37 proteins in 15 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43
None	No IPR available	PANTHER	PTHR36769	2,3-BISPHOSPHOGLYCERATE-DEPENDENT PHOSPHOGLYCERATE MUTASE	coord: 1..102
None	No IPR available	PANTHER	PTHR36769:SF1	2,3-BISPHOSPHOGLYCERATE-DEPENDENT PHOSPHOGLYCERATE MUTASE	coord: 1..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C023583.1	MELO3C023583.1	mRNA