MELO3C023540 (gene) Melon (DHL92) v4

Overview
NameMELO3C023540
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr01: 32937021 .. 32937591 (-)
RNA-Seq ExpressionMELO3C023540
SyntenyMELO3C023540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTCACCGACTCCACATATCATTATATATTCACACACATTTCTTTTTTCTCCCTCTTCGTTAATTTCAATGGCGATTTCCAAGATCTCTGCCGTCGTCTTCCTCGCCTTCGTTGCGGTTTTCTCGGCCGTGGTTTCCGCTCAGGAAGCTCCAGCGCCGGCACCAGAGCTCGACCGAGGAGCAGCCTCGTCTCTGCCTGTTGCGACCTCAATGGCTCTGCTCTTTGCTTCCTTCTTCTTCTCTCTTCCTCCACTTCTAAAGCTCTAAATGAAATCGAATGTGGATTGTCGATTCATATACATTAATTAATTAATTAATTAATTAATTATTAATCATTGTCATTTTTATGTTTAGAGGTTAATTAATTTAAATTTATCGGAAAATAAAATGGAGATTCTTTCGAATCTCTTTAGGCTTTGTTTATTTGTTCATTGTTGTATGTTAGTGATCTGTTTTTGCTGTATGATTATTATTTATTTAGTGTGATTTATTATTTATAATAATGTCTTTGTGTTTCAATTTTGGACTTCAAAGTTAGTGATTGATTGGACATATTATTAATACTTATTGA

mRNA sequence

ATTTCACCGACTCCACATATCATTATATATTCACACACATTTCTTTTTTCTCCCTCTTCGTTAATTTCAATGGCGATTTCCAAGATCTCTGCCGTCGTCTTCCTCGCCTTCGTTGCGGTTTTCTCGGCCGTGGTTTCCGCTCAGGAAGCTCCAGCGCCGGCACCAGAGCTCGACCGAGGAGCAGCCTCGTCTCTGCCTGTTGCGACCTCAATGGCTCTGCTCTTTGCTTCCTTCTTCTTCTCTCTTCCTCCACTTCTAAAGCTCTAAATGAAATCGAATGTGGATTGTCGATTCATATACATTAATTAATTAATTAATTAATTAATTATTAATCATTGTCATTTTTATGTTTAGAGGTTAATTAATTTAAATTTATCGGAAAATAAAATGGAGATTCTTTCGAATCTCTTTAGGCTTTGTTTATTTGTTCATTGTTGTATGTTAGTGATCTGTTTTTGCTGTATGATTATTATTTATTTAGTGTGATTTATTATTTATAATAATGTCTTTGTGTTTCAATTTTGGACTTCAAAGTTAGTGATTGATTGGACATATTATTAATACTTATTGA

Coding sequence (CDS)

ATGGCGATTTCCAAGATCTCTGCCGTCGTCTTCCTCGCCTTCGTTGCGGTTTTCTCGGCCGTGGTTTCCGCTCAGGAAGCTCCAGCGCCGGCACCAGAGCTCGACCGAGGAGCAGCCTCGTCTCTGCCTGTTGCGACCTCAATGGCTCTGCTCTTTGCTTCCTTCTTCTTCTCTCTTCCTCCACTTCTAAAGCTCTAA

Protein sequence

MAISKISAVVFLAFVAVFSAVVSAQEAPAPAPELDRGAASSLPVATSMALLFASFFFSLPPLLKL
Homology
[Close]
BLAST of MELO3C023540 vs. NCBI nr
Match: KGN45142.1 (hypothetical protein Csa_015584 [Cucumis sativus])

HSP 1 Score: 98.6 bits (244), Expect = 2.1e-17
Identity = 59/65 (90.77%), Postives = 61/65 (93.85%), Query Frame = 0 

Query: 1  MAISKISAVVFLAFVAVFSAVVSAQEAPAPAPELDRGAASSLPVATSMALLFASFFFSLP 60
          MAISKIS VVFLA VA+FSA+VSAQEAPAPAP LDRGAASSLPVATSMALLFASFFFSLP
Sbjct: 1  MAISKISPVVFLALVALFSALVSAQEAPAPAPGLDRGAASSLPVATSMALLFASFFFSLP 60

Query: 61 PLLKL 66
           LLKL
Sbjct: 61 ALLKL 65

[Close]
BLAST of MELO3C023540 vs. NCBI nr
Match: KAG6595145.1 (hypothetical protein SDJN03_11698, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 65.9 bits (159), Expect = 1.5e-07
Identity = 50/72 (69.44%), Postives = 52/72 (72.22%), Query Frame = 0 

Query: 1  MAISKISA---VVFLAFVAVFSAVVSAQEA----PAPAPELDRGAASSLPVATSMALLFA 60
          MAIS  S    VV  A VAVFSAV SAQE+    PAPAP LDRGAA +LP A SMALLFA
Sbjct: 1  MAISGTSTVFYVVVFAIVAVFSAVASAQESPVPTPAPAPVLDRGAA-ALPAAASMALLFA 60

Query: 61 SFFFSLPPLLKL 66
          SFF SLP LLKL
Sbjct: 61 SFFLSLPALLKL 71

[Close]
BLAST of MELO3C023540 vs. ExPASy TrEMBL
Match: A0A0A0K9T6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428790 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.0e-17
Identity = 59/65 (90.77%), Postives = 61/65 (93.85%), Query Frame = 0 

Query: 1  MAISKISAVVFLAFVAVFSAVVSAQEAPAPAPELDRGAASSLPVATSMALLFASFFFSLP 60
          MAISKIS VVFLA VA+FSA+VSAQEAPAPAP LDRGAASSLPVATSMALLFASFFFSLP
Sbjct: 1  MAISKISPVVFLALVALFSALVSAQEAPAPAPGLDRGAASSLPVATSMALLFASFFFSLP 60

Query: 61 PLLKL 66
           LLKL
Sbjct: 61 ALLKL 65

The following BLAST results are available for this feature:
BLAST of MELO3C023540 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN45142.12.1e-1790.77hypothetical protein Csa_015584 [Cucumis sativus][more]
KAG6595145.11.5e-0769.44hypothetical protein SDJN03_11698, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of MELO3C023540 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C023540 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9T61.0e-1790.77Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428790 PE=4 SV=1[more]
BLAST of MELO3C023540 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C023540.1MELO3C023540.1mRNA