MELO3C023447 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACTCAATTCTCACATGCAAATTAAGGCTATAACTTCCCGTTTCCAATGCCGAACAAAACCGCTTCCTCTTCCCGCCTTTGCCTCTGTGCTCCGACCACCCATCCCGGCTCTTTCCGCTGCAGCCTCCACCGCCGTCCCTCGAATTCCTCCCACAAGACGCCGCAGCCGCTGCCTCCTCCGCATGGAAGCCAATCGAAGGCGGCAACGACGACGACGGATCATTATTTCCTTAAGGCGTTTCTGATGCAGATCGTAAAGCCGTCGAGTCATGGTCTTCAAAGACGGGGAAATTTCCAGCCTAAACCTTCTCGATTCTGCAATATCGTCTCCGCTCCGGATCCTCGTTTGGCTGTTTCATGATCGTGAATCGCGTACGTATGCATACATATGTGATTCATGGTTTTTGAAATTCTTTATCGATCATTTCTGTTTTTGCGGATGGAATTTAGTGTGTGTTGTGTACAGGGGAACGTGAAATTGAAAACGTGATTAAGCGTTTCTGATCTTCGTTTTGAGATTAATTTATGGAATTGTTAGGGCTTTTGAACTGAAATTGTGTAGTTTGTATATAATTGGAGGATTAGCAGACTGATCTTGTAAATAGTGAGAAAACTACAACTTTTATGAAACATAAAATAGTTTCAAATATTGATTGGAGAAGAAATTATTGAACTTTTGGTTAAAAAGGAAATCTTACGATATTACCCATTGTGTATGAATTAGTTTCGATAATTTAATGACATCAAATAGATTAATTAGTTTCAATTCAAATTATCACTCTGCCATTTTTGAAAGCTCCTCTTGATCATAATCACAATTTAAACTATCACTCTGCC ACTCAATTCTCACATGCAAATTAAGGCTATAACTTCCCGTTTCCAATGCCGAACAAAACCGCTTCCTCTTCCCGCCTTTGCCTCTGTGCTCCGACCACCCATCCCGGCTCTTTCCGCTGCAGCCTCCACCGCCGTCCCTCGAATTCCTCCCACAAGACGCCGCAGCCGCTGCCTCCTCCGCATGGAAGCCAATCGAAGGCGGCAACGACGACGACGGATCATTATTTCCTTAAGGCGTTTCTGATGCAGATCGTAAAGCCGTCGAGTCATGGTCTTCAAAGACGGGGAAATTTCCAGCCTAAACCTTCTCGATTCTGCAATATCGTCTCCGCTCCGGATCCTCGTTTGGCTGTTTCATGATCGTGAATCGCGTACGTATGCATACATATGTGATTCATGGTTTTTGAAATTCTTTATCGATCATTTCTGTTTTTGCGGATGGAATTTAGTGTGTGTTGTGTACAGGGGAACGTGAAATTGAAAACGTGATTAAGCGTTTCTGATCTTCGTTTTGAGATTAATTTATGGAATTGTTAGGGCTTTTGAACTGAAATTGTGTAGTTTGTATATAATTGGAGGATTAGCAGACTGATCTTGTAAATAGTGAGAAAACTACAACTTTTATGAAACATAAAATAGTTTCAAATATTGATTGGAGAAGAAATTATTGAACTTTTGGTTAAAAAGGAAATCTTACGATATTACCCATTGTGTATGAATTAGTTTCGATAATTTAATGACATCAAATAGATTAATTAGTTTCAATTCAAATTATCACTCTGCCATTTTTGAAAGCTCCTCTTGATCATAATCACAATTTAAACTATCACTCTGCC ATGCCGAACAAAACCGCTTCCTCTTCCCGCCTTTGCCTCTGTGCTCCGACCACCCATCCCGGCTCTTTCCGCTGCAGCCTCCACCGCCGTCCCTCGAATTCCTCCCACAAGACGCCGCAGCCGCTGCCTCCTCCGCATGGAAGCCAATCGAAGGCGGCAACGACGACGACGGATCATTATTTCCTTAAGGCGTTTCTGATGCAGATCGTAAAGCCGTCGAGTCATGGTCTTCAAAGACGGGGAAATTTCCAGCCTAAACCTTCTCGATTCTGCAATATCGTCTCCGCTCCGGATCCTCGTTTGGCTGTTTCATGA MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPRLAVS Homology
BLAST of MELO3C023447 vs. NCBI nr
Match: XP_008461151.1 (PREDICTED: uncharacterized protein LOC103499822 [Cucumis melo]) HSP 1 Score: 218.8 bits (556), Expect = 2.2e-53 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
BLAST of MELO3C023447 vs. NCBI nr
Match: KAA0058731.1 (uncharacterized protein E6C27_scaffold339G002010 [Cucumis melo var. makuwa]) HSP 1 Score: 215.7 bits (548), Expect = 1.9e-52 Identity = 103/104 (99.04%), Postives = 103/104 (99.04%), Query Frame = 0
BLAST of MELO3C023447 vs. NCBI nr
Match: KGN45240.1 (hypothetical protein Csa_016736 [Cucumis sativus]) HSP 1 Score: 183.0 bits (463), Expect = 1.4e-42 Identity = 92/106 (86.79%), Postives = 97/106 (91.51%), Query Frame = 0
BLAST of MELO3C023447 vs. NCBI nr
Match: KAG6593379.1 (hypothetical protein SDJN03_12855, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 126.7 bits (317), Expect = 1.2e-25 Identity = 73/105 (69.52%), Postives = 81/105 (77.14%), Query Frame = 0
BLAST of MELO3C023447 vs. NCBI nr
Match: KAG7025727.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 125.2 bits (313), Expect = 3.4e-25 Identity = 68/96 (70.83%), Postives = 75/96 (78.12%), Query Frame = 0
BLAST of MELO3C023447 vs. ExPASy TrEMBL
Match: A0A1S3CEH6 (uncharacterized protein LOC103499822 OS=Cucumis melo OX=3656 GN=LOC103499822 PE=4 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 1.1e-53 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
BLAST of MELO3C023447 vs. ExPASy TrEMBL
Match: A0A5A7UZ19 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G002010 PE=4 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 9.2e-53 Identity = 103/104 (99.04%), Postives = 103/104 (99.04%), Query Frame = 0
BLAST of MELO3C023447 vs. ExPASy TrEMBL
Match: A0A0A0K698 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432210 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 6.6e-43 Identity = 92/106 (86.79%), Postives = 97/106 (91.51%), Query Frame = 0
BLAST of MELO3C023447 vs. ExPASy TrEMBL
Match: A0A6J1DD51 (uncharacterized protein LOC111019381 OS=Momordica charantia OX=3673 GN=LOC111019381 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 3.2e-21 Identity = 59/94 (62.77%), Postives = 68/94 (72.34%), Query Frame = 0
BLAST of MELO3C023447 vs. ExPASy TrEMBL
Match: A0A061G8R4 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_027325 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 6.2e-17 Identity = 53/95 (55.79%), Postives = 65/95 (68.42%), Query Frame = 0
BLAST of MELO3C023447 vs. TAIR 10
Match: AT5G11090.1 (serine-rich protein-related ) HSP 1 Score: 68.6 bits (166), Expect = 3.5e-12 Identity = 38/115 (33.04%), Postives = 57/115 (49.57%), Query Frame = 0
BLAST of MELO3C023447 vs. TAIR 10
Match: AT5G25280.1 (serine-rich protein-related ) HSP 1 Score: 67.0 bits (162), Expect = 1.0e-11 Identity = 37/114 (32.46%), Postives = 57/114 (50.00%), Query Frame = 0
BLAST of MELO3C023447 vs. TAIR 10
Match: AT5G25280.2 (serine-rich protein-related ) HSP 1 Score: 67.0 bits (162), Expect = 1.0e-11 Identity = 37/114 (32.46%), Postives = 57/114 (50.00%), Query Frame = 0
BLAST of MELO3C023447 vs. TAIR 10
Match: AT5G20370.1 (serine-rich protein-related ) HSP 1 Score: 49.7 bits (117), Expect = 1.7e-06 Identity = 34/105 (32.38%), Postives = 45/105 (42.86%), Query Frame = 0
BLAST of MELO3C023447 vs. TAIR 10
Match: AT1G24577.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67910.2); Has 115 Blast hits to 115 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 115; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 47.0 bits (110), Expect = 1.1e-05 Identity = 18/38 (47.37%), Postives = 28/38 (73.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
|