MELO3C023233.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C023233.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	RAB GTPASE HOMOLOG B18
Location	chr11: 539070 .. 543191 (-)
RNA-Seq Expression	MELO3C023233.jh1
Synteny	MELO3C023233.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCAAGATCAGGGTCTTCTTAAATTTCTTTCTATCTTTCTTTTCCCCTTCATTGGATGAGCTATCAGTTCTACATTGGATTGCAGCATTTGGGTATTAAATTTGATCCGTTTTTACGTGATGTCATGTTCGATTTCATTGTGATTCATTCAATTCCATTTCTGTCGCATGTTTTCGTATTTCTTTGGTAATGGTGCATGCTGTTTTGGATTTGTTGAATCAACTGACATTTGGGTTTTTTTTTTTTTTCTTTGATTAGGTACGTAAATCGGGAAGCGATCTTGTTTTTAAAAATTGTTTATTGGGTTGGAGCTATTGGAGGACGGATTTGATGGATTCGACGTCAAACCAAACCGAGTTTGATTACTTGTTCAAATTGTTGATGATTGGGGACTCTGGGGTTGGAAAAAGTAGTCTGCTTTTAAGTTTCACTTCCGATAACTTTGAAGATCTCTCACCGACTATCGGTTAGTTTTGCTATACGGATCAGATTTTAAGAATTGGTTTGGAATTTCCTTTTTTGCTTTTGTGGGATCTTGCGCATTTTTTTGAAGATGAGCCTAGACAAATCGGTTTTGTTGTTTGCTGCGGAATATTGGTTCATCATTTTAAAGAAAAATGTGGAAAGACAATGATATGCTTTTGCTGAATATTGGTTCATCATTTTCACTTTCATCTTCACCTTCTGCATGGGATTGAGGGCAAAAAATTAAATGAAAGGGAAAGTTGAGAGGACCAAGATTGAGAGGCAATTAATCTTTTAACCGTATTTCATCAAGAGAAGAATGAAGCTCTTAGATAATCAGGTCAAGTGTCATTTTTTTAGGACAGTGTAAGGAGCTTAGCTATAATCGTATCCGAGAAACTAAAATGAGAAGTCATGCAAGAGGTCATTTGTGCATTAATTTCTAATGGAAAATAATATTTCCATGTAAATATGTCCTTTCAGGTGTACAATGAAAAGTTCATTTTCTTCGTAATATATATATACTGTATACTTCCTACCAGCTCTATCATCACTGGTCATTTATACTTTTGCATTCTGTTCGGTACTTACTGACCCTGTGTAAATCTGGGCATATGCTCATCGTCCTACTGTGGGGCTATTAGTAGAATAGATTTCCTTTTACCTGTGTAAGTTTGGCTGAATTTCAAACTGCATAGCTGAAATTTTGGATTTTCTCTTTCTTATTAAAACATTATTAACAACATTGAGAATTTGAAATGATTTTGATTATAAATCCTACATCTGCATGTTTAATTGTGCTGGTTTGCTTGTTTAAAATGAAAAACGGCGCAAGCCTTGCTAACTTCTTAATTTGCCTTGCAATGGCATGTAACCATCAATAGACCAGAAATGACTTGTAATTAATTGGTTGTTTTTGTGGGCAGGTGTGGATTTTAAGGTAAAGTATGTTACTGCTGGGGGTAAAAAGCTGAAGCTTGCAATTTGGGATACTGGTAACTAAGCTTCTCCACATACATAATTACGCTTTTTCTTCCTCCATTTTATTTTTGAGAGGGCATCTATTCTATTTTCCACACATGCAAGATGTATGCTTTGGCAGAGTAGCACCAAACGGCTAAGTTAGATAATTAATTTACAAAAGGATATTGCTTAGCTAATTATTAGCAGCTAGACAGTATACTAAATTATAAATACATTGAGGCTTGCCCATTTGCGTAGCTTGTCCTTTGTTCACCAGCTCAAAGTTGACTTTTCGTTCATGGTCTTGTCATGAACTCCAGTGGAAACTAGTAGGCAATCTATGCAGTAATCCTTGATTCGGCACAGATTTCTCTTGTTTGGAATGTAGAAGCTATTGTTACCGAATCTTTGAGGCATTAAATAAATGGATGAGAAGACAATAAATTTAATCAATTGAGAAATAGATCTGGAAGGTGAAAACGAATGCTGACTGTTGACCATAAGTGTGCCTGGATGATGGTTCTGCTATGCAGACAAATGCAACATGAATGAACTTTGCACGTTCATGTATAAAACTTCGTTGAACCTGCAGCCGCAGCCAGCTAGAGCTTTTTCATCAAGATTAGAAACTTGTTCATATTTATGTTTGAATCAAATTTGGATCTTGGCCTAACAGACTAAGAAATTGCTCAAAGGATTGTACATGCTTATTCTAATTCTCAATTGTTATCCAGTGGTCCTAGTGCTGTGAATTATAAAGATAATATAGTTGTTCTTGTTGATTAGCCATGATGTATTTGATGGTAGGGTACTAGGGTATTACTTCTTATATTTTCTTGTAATGAATCTGTATGAAAGAAATCTGGTTTACCACATCTTGAAACTATGCATCCTGAAGAATCTAACTCAATGTTCAATCGTACAGCTGGGCAGGAGAGATTCAGAACACTGACTAGTTCATACTACAGAGGTGCTCAAGGGATCATTATGGGTGCGTTCTATTCCCCTCTTTATTTGATTGTTTTAAAGAGAAGAAATTCTTTGCTTGGCATAAATGTTAAATTTCTCTGCTGTGTAATGTGTTTAGATTAAACGCGTTCATGATTTTATCAAATAGTAAGTTGTTCACTTGTTTGGCCGTCCAATATTATTCTATTGCCTTTTGTATTGTGTTGTCTTGATTATGACATCAAATGTTAACTGTGTTAGTTTATGATGTAACGAGGAGAGATACATTTACAAACCTTTCTGAGGTATGGGCAAAGGAAATAGATCTATATTCAACAAATCCAGATTGCATCAAGATGCTTGTTGGAAACAAAGTTGATAAGGTATGCGTCTTCAACTTCCACTTGAAATTTTCCATTCACCTGAATCTGGTTACTCTAACATTTGTATAGATGCCGATTAATTGATCAAGTGTACGTTGAACTGAAATTCATATTCCAAAGAGTTTTCAGGTTAATTACTGATAACATATTGATAATTTAAGAACCGATTAAATGAGTTATGAGTATCAAAGCTTTTTCCGTATGAGTTTGTTAGGTATCCAAACTGTTATTTACTACTATTATTAGAAAGCTTAGAAGATGGTCTAGTGGTAAAAAAGGAGACATAGTCTTAATTACTAACTAAGAGGTCATGGGTTCAATCCATTGTAACCACCTGCATAGGAATTAATTTTCTACAAGTTGTAAGGTCAATGGGCTGTCCCGTGAGATTAGTCGATGGCACGGACACTCATGGATGTAAAAGAAAGAATTAGAAAGCTTAGAAGAGTGTTGAAACACCTTACAAATGAAATCTAGCTTCTAGGGCTGGCTCATCTCCACGCACAAAGCCTAACCTAAATTATGACTCAAGAAACCAAACTTCCAATAGGAAGAACATAAAAACAAAAAGGCATGTGCGAAATACACTAAATGTGAAGTTCAGGTTTTTGAGATTCTTTTAAATTTCTTATGATATTGTTTCTCATTGTCTGCATCTAACTTATTTTTTATCTGGAATTTTATTCTTCAGGAAAGTTATAGGACAGTAACCAAGAAAGAGGGAATTGACATGGCTAGGGAATATGGTTGTCTTTTTATAGAATGCAGTGCCAAAACTCGAGTTAATGTACAGCAGTGCTTTGAAGAACTTGTTTTAAAGGTAACAATTTCAGTTTAGTATTATCCTTGGTTCATTTGTTGGTCAAGGGATTTATATTGATTGGTGAGTAGCAGGAACATGGTGTTTCCTTGAACAGTCACATTTCTGATTTGTTTCAAAATATAAAAGCTATCACGTTCCTGGTATATTCATAAATAGGTTAAGGTATTGAAAATTTTTGAACCTTCTTGAATCGTCATGTTTTAAAACATGATAATAACGATTCTTATATGCAGATTCTTGATACGCCCAGCCTTTTATCTGAAGGCTCTAAAGGAGTGAGAAGGAACATCTTCAAGGAAAAGCCTCCACAGTCTGATGCATCCGCGAGCAGTTGTTGCTGAAATTGATTCATTGTCTCTAACTACATTTGCTGGTTGTTTCTAAATTGTTGTAAAACTACAGTAGAGAAGCATGGTGTTATAGCTTTTATTTGTCTCTCACAAATTACCTTACAAATTGGAAAGGGTGGTCTTGTCTTCTTGCTGGCTTTCTTGTACAGGGAAAATTTGAAATGAAAATCTATGATACATGATTTCAGTC

mRNA sequence

ACCAAGATCAGGGTCTTCTTAAATTTCTTTCTATCTTTCTTTTCCCCTTCATTGGATGAGCTATCAGTTCTACATTGGATTGCAGCATTTGGGTACGTAAATCGGGAAGCGATCTTGTTTTTAAAAATTGTTTATTGGGTTGGAGCTATTGGAGGACGGATTTGATGGATTCGACGTCAAACCAAACCGAGTTTGATTACTTGTTCAAATTGTTGATGATTGGGGACTCTGGGGTTGGAAAAAGTAGTCTGCTTTTAAGTTTCACTTCCGATAACTTTGAAGATCTCTCACCGACTATCGGTGTGGATTTTAAGGTAAAGTATGTTACTGCTGGGGGTAAAAAGCTGAAGCTTGCAATTTGGGATACTGCTGGGCAGGAGAGATTCAGAACACTGACTAGTTCATACTACAGAGGTGCTCAAGGGATCATTATGGTTTATGATGTAACGAGGAGAGATACATTTACAAACCTTTCTGAGGTATGGGCAAAGGAAATAGATCTATATTCAACAAATCCAGATTGCATCAAGATGCTTGTTGGAAACAAAGTTGATAAGGAAAGTTATAGGACAGTAACCAAGAAAGAGGGAATTGACATGGCTAGGGAATATGGTTGTCTTTTTATAGAATGCAGTGCCAAAACTCGAGTTAATGTACAGCAGTGCTTTGAAGAACTTGTTTTAAAGATTCTTGATACGCCCAGCCTTTTATCTGAAGGCTCTAAAGGAGTGAGAAGGAACATCTTCAAGGAAAAGCCTCCACAGTCTGATGCATCCGCGAGCAGTTGTTGCTGAAATTGATTCATTGTCTCTAACTACATTTGCTGGTTGTTTCTAAATTGTTGTAAAACTACAGTAGAGAAGCATGGTGTTATAGCTTTTATTTGTCTCTCACAAATTACCTTACAAATTGGAAAGGGTGGTCTTGTCTTCTTGCTGGCTTTCTTGTACAGGGAAAATTTGAAATGAAAATCTATGATACATGATTTCAGTC

Coding sequence (CDS)

ATGGATTCGACGTCAAACCAAACCGAGTTTGATTACTTGTTCAAATTGTTGATGATTGGGGACTCTGGGGTTGGAAAAAGTAGTCTGCTTTTAAGTTTCACTTCCGATAACTTTGAAGATCTCTCACCGACTATCGGTGTGGATTTTAAGGTAAAGTATGTTACTGCTGGGGGTAAAAAGCTGAAGCTTGCAATTTGGGATACTGCTGGGCAGGAGAGATTCAGAACACTGACTAGTTCATACTACAGAGGTGCTCAAGGGATCATTATGGTTTATGATGTAACGAGGAGAGATACATTTACAAACCTTTCTGAGGTATGGGCAAAGGAAATAGATCTATATTCAACAAATCCAGATTGCATCAAGATGCTTGTTGGAAACAAAGTTGATAAGGAAAGTTATAGGACAGTAACCAAGAAAGAGGGAATTGACATGGCTAGGGAATATGGTTGTCTTTTTATAGAATGCAGTGCCAAAACTCGAGTTAATGTACAGCAGTGCTTTGAAGAACTTGTTTTAAAGATTCTTGATACGCCCAGCCTTTTATCTGAAGGCTCTAAAGGAGTGAGAAGGAACATCTTCAAGGAAAAGCCTCCACAGTCTGATGCATCCGCGAGCAGTTGTTGCTGA

Protein sequence

MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQSDASASSCC

Homology

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BLAST of MELO3C023233.jh1 vs. NCBI nr
Match: XP_008460888.1 (PREDICTED: ras-related protein RABC1-like [Cucumis melo] >KAA0040756.1 ras-related protein RABC1-like [Cucumis melo var. makuwa] >TYK02071.1 ras-related protein RABC1-like [Cucumis melo var. makuwa])

HSP 1 Score: 420 bits (1079), Expect = 4.31e-148
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS
Sbjct: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASASSCC 209
           LLSEGSKGVRRNIFKEKPPQSDASASSCC
Sbjct: 181 LLSEGSKGVRRNIFKEKPPQSDASASSCC 209

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BLAST of MELO3C023233.jh1 vs. NCBI nr
Match: XP_004147350.1 (ras-related protein RABC1 [Cucumis sativus] >KGN62201.1 hypothetical protein Csa_016939 [Cucumis sativus])

HSP 1 Score: 413 bits (1062), Expect = 1.69e-145
Identity = 206/209 (98.56%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTN DC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLF ECSAKTRVNVQQCFEELVLKILDTPS
Sbjct: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASASSCC 209
           LLSEGSKGVRRNIFKEKPPQSDAS SSCC
Sbjct: 181 LLSEGSKGVRRNIFKEKPPQSDASTSSCC 209

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BLAST of MELO3C023233.jh1 vs. NCBI nr
Match: XP_022156664.1 (ras-related protein RABC1-like [Momordica charantia])

HSP 1 Score: 407 bits (1045), Expect = 6.59e-143
Identity = 202/209 (96.65%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           MDS+SNQ+EFDYLFKLLMIGDSGVGKSSLLLSFTSD+FEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNLSEVWAKEIDLYSTN DC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS
Sbjct: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASASSCC 209
           LLSEGSKGVRRNIFKEKPPQ DAS SSCC
Sbjct: 181 LLSEGSKGVRRNIFKEKPPQPDASTSSCC 209

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BLAST of MELO3C023233.jh1 vs. NCBI nr
Match: XP_038901438.1 (ras-related protein RABC1-like [Benincasa hispida])

HSP 1 Score: 406 bits (1043), Expect = 1.33e-142
Identity = 201/209 (96.17%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFT+D+FEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTTDSFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNLSEVWA+EIDLYSTN DC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAREIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKES+RTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS
Sbjct: 121 IKMLVGNKVDKESFRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASASSCC 209
           LLSEGSKGVRRNIFKEKPPQ DAS SSCC
Sbjct: 181 LLSEGSKGVRRNIFKEKPPQPDASTSSCC 209

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BLAST of MELO3C023233.jh1 vs. NCBI nr
Match: XP_022971628.1 (ras-related protein RABC1-like [Cucurbita maxima])

HSP 1 Score: 400 bits (1029), Expect = 1.81e-140
Identity = 199/209 (95.22%), Postives = 205/209 (98.09%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSD+FEDLSPTIGVDFKVKYVTAGGK+
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKR 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNLSEVWAKEIDLYSTN DC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKES+RTVTKKEGIDMARE GCLF ECSAKTRVNVQQCFEELVLKIL+TPS
Sbjct: 121 IKMLVGNKVDKESFRTVTKKEGIDMARECGCLFTECSAKTRVNVQQCFEELVLKILETPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASASSCC 209
           LLSEGSKGVR+NIFKEKPPQ DASASSCC
Sbjct: 181 LLSEGSKGVRKNIFKEKPPQPDASASSCC 209

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BLAST of MELO3C023233.jh1 vs. ExPASy Swiss-Prot
Match: O23657 (Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 5.3e-97
Identity = 172/209 (82.30%), Postives = 192/209 (91.87%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           M S+S Q EFDYLFK+L+IGDSGVGKSSLLLSFTS+ F+DLSPTIGVDFKVKY+T G KK
Sbjct: 1   MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLS++WAKEIDLYSTN DC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKES R V+KKEGID AREYGCLF+ECSAKTRVNV+QCFEELVLKIL+TPS
Sbjct: 121 IKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASASSCC 210
           L +EGS G ++NIFK+ P Q+ +++SS C
Sbjct: 181 LTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209

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BLAST of MELO3C023233.jh1 vs. ExPASy Swiss-Prot
Match: O49841 (Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 2.1e-82
Identity = 143/209 (68.42%), Postives = 176/209 (84.21%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           M S+S Q+ +D  FK+L+IGDSGVGKSSLL+SF S + EDL+PTIGVDFK+K +T GGK+
Sbjct: 1   MGSSSGQSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKR 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDC 120
           LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRR+TFTNL +VW KEI+LYSTN +C
Sbjct: 61  LKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQEC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           ++MLVGNKVD+ES R V+++EGI +A+E  C+F+ECSA+TR NV+QCFEEL LKI++ PS
Sbjct: 121 VRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASASSCC 210
           LL EGS  V+RNI K+KP     + S CC
Sbjct: 181 LLEEGSSAVKRNILKQKPEHQTNTQSGCC 209

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BLAST of MELO3C023233.jh1 vs. ExPASy Swiss-Prot
Match: Q9SF92 (Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.4e-73
Identity = 134/209 (64.11%), Postives = 166/209 (79.43%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           M S+S Q+ +D  FK+L+IGDSGVGKSSLLLSF S + EDL+PTIGVDFK+K +   GK+
Sbjct: 1   MGSSSGQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGKR 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDC 120
           LKL IWDTAGQE+FRTLTSSY+RG+QGII+VYDVT+R+TF NL+++WAKEI+LYSTN DC
Sbjct: 61  LKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVD+ES R V+++EG+ +A++  CLF ECSA+TR NV  CFEEL LKI++ PS
Sbjct: 121 IKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASASSCC 210
           LL EGS  V+R       P   A    CC
Sbjct: 181 LLEEGSSSVKRK------PDYRAHQGRCC 203

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BLAST of MELO3C023233.jh1 vs. ExPASy Swiss-Prot
Match: P36862 (GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.0e-59
Identity = 115/179 (64.25%), Postives = 136/179 (75.98%), Query Frame = 0


Query: 11  DYLFKLLMIGDSGVGKSSLLLSFTSDNFED-LSPTIGVDFKVKYVTAGGKKLKLAIWDTA 70
           DY FK+L++GDSGVGKS +L  FTS  FE+  + TIGVDFKVKY+TA GK+ KL IWDTA
Sbjct: 7   DYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTIWDTA 66

Query: 71  GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDCIKMLVGNKV 130
           GQERFRTLTSSYYRGAQGII VYDVTRRDTF +L   W +E D+YST    IKM+V NKV
Sbjct: 67  GQERFRTLTSSYYRGAQGIIFVYDVTRRDTFESLEANWMREFDIYSTVESAIKMVVANKV 126

Query: 131 DKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKG 189
           D  + R V+ +EG D AR +GCLF+E SA+  + V Q FEEL+LKILDTP LL   + G
Sbjct: 127 DLSAQRQVSSEEGHDFARRHGCLFVETSARANLAVGQAFEELLLKILDTPLLLETTAVG 185

[Close]

BLAST of MELO3C023233.jh1 vs. ExPASy Swiss-Prot
Match: Q6DHC1 (Ras-related protein Rab-18-B OS=Danio rerio OX=7955 GN=rab18b PE=2 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.5e-54
Identity = 112/195 (57.44%), Postives = 137/195 (70.26%), Query Frame = 0


Query: 15  KLLMIGDSGVGKSSLLLSFTSDNFE-DLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQER 74
           K+L+IG+SGVGKSSLLL FT D F+ +L+ TIGVDFKVK +   G + KLAIWDTAGQER
Sbjct: 10  KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAIDGNRAKLAIWDTAGQER 69

Query: 75  FRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDCIKMLVGNKVDKES 134
           FRTLT SYYRGAQG+I+VYDVT+RDTFT L E W  E++ Y T  D +KMLVGNK+DK++
Sbjct: 70  FRTLTPSYYRGAQGVILVYDVTKRDTFTKL-ENWLNELETYCTRNDLVKMLVGNKIDKDN 129

Query: 135 YRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNI 194
            R V + EG+  AR++  LFIE SAKTR  VQ  FEELV KIL TP L     +     +
Sbjct: 130 -REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKILQTPGLWESSIQNHGVQL 189

Query: 195 FKEKPPQSDASASSC 209
              +P +  A    C
Sbjct: 190 SDNEPQRQGACGGYC 202

[Close]

BLAST of MELO3C023233.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BQN6 (Ras-related protein RABC1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00560 PE=4 SV=1)

HSP 1 Score: 420 bits (1079), Expect = 2.09e-148
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS
Sbjct: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASASSCC 209
           LLSEGSKGVRRNIFKEKPPQSDASASSCC
Sbjct: 181 LLSEGSKGVRRNIFKEKPPQSDASASSCC 209

[Close]

BLAST of MELO3C023233.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CDH6 (ras-related protein RABC1-like OS=Cucumis melo OX=3656 GN=LOC103499629 PE=4 SV=1)

HSP 1 Score: 420 bits (1079), Expect = 2.09e-148
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS
Sbjct: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASASSCC 209
           LLSEGSKGVRRNIFKEKPPQSDASASSCC
Sbjct: 181 LLSEGSKGVRRNIFKEKPPQSDASASSCC 209

[Close]

BLAST of MELO3C023233.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LQC6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G334520 PE=4 SV=1)

HSP 1 Score: 413 bits (1062), Expect = 8.16e-146
Identity = 206/209 (98.56%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTN DC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLF ECSAKTRVNVQQCFEELVLKILDTPS
Sbjct: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASASSCC 209
           LLSEGSKGVRRNIFKEKPPQSDAS SSCC
Sbjct: 181 LLSEGSKGVRRNIFKEKPPQSDASTSSCC 209

[Close]

BLAST of MELO3C023233.jh1 vs. ExPASy TrEMBL
Match: A0A6J1DU73 (ras-related protein RABC1-like OS=Momordica charantia OX=3673 GN=LOC111023514 PE=4 SV=1)

HSP 1 Score: 407 bits (1045), Expect = 3.19e-143
Identity = 202/209 (96.65%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           MDS+SNQ+EFDYLFKLLMIGDSGVGKSSLLLSFTSD+FEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNLSEVWAKEIDLYSTN DC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS
Sbjct: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASASSCC 209
           LLSEGSKGVRRNIFKEKPPQ DAS SSCC
Sbjct: 181 LLSEGSKGVRRNIFKEKPPQPDASTSSCC 209

[Close]

BLAST of MELO3C023233.jh1 vs. ExPASy TrEMBL
Match: A0A6J1I7F2 (ras-related protein RABC1-like OS=Cucurbita maxima OX=3661 GN=LOC111470311 PE=4 SV=1)

HSP 1 Score: 400 bits (1029), Expect = 8.78e-141
Identity = 199/209 (95.22%), Postives = 205/209 (98.09%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSD+FEDLSPTIGVDFKVKYVTAGGK+
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKR 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNLSEVWAKEIDLYSTN DC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKES+RTVTKKEGIDMARE GCLF ECSAKTRVNVQQCFEELVLKIL+TPS
Sbjct: 121 IKMLVGNKVDKESFRTVTKKEGIDMARECGCLFTECSAKTRVNVQQCFEELVLKILETPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASASSCC 209
           LLSEGSKGVR+NIFKEKPPQ DASASSCC
Sbjct: 181 LLSEGSKGVRKNIFKEKPPQPDASASSCC 209

[Close]

BLAST of MELO3C023233.jh1 vs. TAIR 10
Match: AT1G43890.1 (RAB GTPASE HOMOLOG B18 )

HSP 1 Score: 355.1 bits (910), Expect = 3.7e-98
Identity = 172/209 (82.30%), Postives = 192/209 (91.87%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           M S+S Q EFDYLFK+L+IGDSGVGKSSLLLSFTS+ F+DLSPTIGVDFKVKY+T G KK
Sbjct: 1   MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLS++WAKEIDLYSTN DC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKES R V+KKEGID AREYGCLF+ECSAKTRVNV+QCFEELVLKIL+TPS
Sbjct: 121 IKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASASSCC 210
           L +EGS G ++NIFK+ P Q+ +++SS C
Sbjct: 181 LTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209

[Close]

BLAST of MELO3C023233.jh1 vs. TAIR 10
Match: AT1G43890.2 (RAB GTPASE HOMOLOG B18 )

HSP 1 Score: 355.1 bits (910), Expect = 3.7e-98
Identity = 172/209 (82.30%), Postives = 192/209 (91.87%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           M S+S Q EFDYLFK+L+IGDSGVGKSSLLLSFTS+ F+DLSPTIGVDFKVKY+T G KK
Sbjct: 1   MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLS++WAKEIDLYSTN DC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKES R V+KKEGID AREYGCLF+ECSAKTRVNV+QCFEELVLKIL+TPS
Sbjct: 121 IKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASASSCC 210
           L +EGS G ++NIFK+ P Q+ +++SS C
Sbjct: 181 LTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209

[Close]

BLAST of MELO3C023233.jh1 vs. TAIR 10
Match: AT1G43890.3 (RAB GTPASE HOMOLOG B18 )

HSP 1 Score: 355.1 bits (910), Expect = 3.7e-98
Identity = 172/209 (82.30%), Postives = 192/209 (91.87%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           M S+S Q EFDYLFK+L+IGDSGVGKSSLLLSFTS+ F+DLSPTIGVDFKVKY+T G KK
Sbjct: 1   MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLS++WAKEIDLYSTN DC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKES R V+KKEGID AREYGCLF+ECSAKTRVNV+QCFEELVLKIL+TPS
Sbjct: 121 IKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASASSCC 210
           L +EGS G ++NIFK+ P Q+ +++SS C
Sbjct: 181 LTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209

[Close]

BLAST of MELO3C023233.jh1 vs. TAIR 10
Match: AT5G03530.1 (RAB GTPase homolog C2A )

HSP 1 Score: 306.6 bits (784), Expect = 1.5e-83
Identity = 143/209 (68.42%), Postives = 176/209 (84.21%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           M S+S Q+ +D  FK+L+IGDSGVGKSSLL+SF S + EDL+PTIGVDFK+K +T GGK+
Sbjct: 1   MGSSSGQSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKR 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDC 120
           LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRR+TFTNL +VW KEI+LYSTN +C
Sbjct: 61  LKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQEC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           ++MLVGNKVD+ES R V+++EGI +A+E  C+F+ECSA+TR NV+QCFEEL LKI++ PS
Sbjct: 121 VRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASASSCC 210
           LL EGS  V+RNI K+KP     + S CC
Sbjct: 181 LLEEGSSAVKRNILKQKPEHQTNTQSGCC 209

[Close]

BLAST of MELO3C023233.jh1 vs. TAIR 10
Match: AT3G09910.1 (RAB GTPase homolog C2B )

HSP 1 Score: 277.3 bits (708), Expect = 9.9e-75
Identity = 134/209 (64.11%), Postives = 166/209 (79.43%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           M S+S Q+ +D  FK+L+IGDSGVGKSSLLLSF S + EDL+PTIGVDFK+K +   GK+
Sbjct: 1   MGSSSGQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGKR 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDC 120
           LKL IWDTAGQE+FRTLTSSY+RG+QGII+VYDVT+R+TF NL+++WAKEI+LYSTN DC
Sbjct: 61  LKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVD+ES R V+++EG+ +A++  CLF ECSA+TR NV  CFEEL LKI++ PS
Sbjct: 121 IKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASASSCC 210
           LL EGS  V+R       P   A    CC
Sbjct: 181 LLEEGSSSVKRK------PDYRAHQGRCC 203

The following BLAST results are available for this feature:

BLAST of MELO3C023233.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460888.1	4.31e-148	100.00	PREDICTED: ras-related protein RABC1-like [Cucumis melo] >KAA0040756.1 ras-relat...	[more]
XP_004147350.1	1.69e-145	98.56	ras-related protein RABC1 [Cucumis sativus] >KGN62201.1 hypothetical protein Csa...	[more]
XP_022156664.1	6.59e-143	96.65	ras-related protein RABC1-like [Momordica charantia]	[more]
XP_038901438.1	1.33e-142	96.17	ras-related protein RABC1-like [Benincasa hispida]	[more]
XP_022971628.1	1.81e-140	95.22	ras-related protein RABC1-like [Cucurbita maxima]	[more]

BLAST of MELO3C023233.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23657	5.3e-97	82.30	Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1	[more]
O49841	2.1e-82	68.42	Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1	[more]
Q9SF92	1.4e-73	64.11	Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1	[more]
P36862	2.0e-59	64.25	GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1	[more]
Q6DHC1	2.5e-54	57.44	Ras-related protein Rab-18-B OS=Danio rerio OX=7955 GN=rab18b PE=2 SV=1	[more]

BLAST of MELO3C023233.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BQN6	2.09e-148	100.00	Ras-related protein RABC1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CDH6	2.09e-148	100.00	ras-related protein RABC1-like OS=Cucumis melo OX=3656 GN=LOC103499629 PE=4 SV=1	[more]
A0A0A0LQC6	8.16e-146	98.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G334520 PE=4 SV=1	[more]
A0A6J1DU73	3.19e-143	96.65	ras-related protein RABC1-like OS=Momordica charantia OX=3673 GN=LOC111023514 PE...	[more]
A0A6J1I7F2	8.78e-141	95.22	ras-related protein RABC1-like OS=Cucurbita maxima OX=3661 GN=LOC111470311 PE=4 ...	[more]

BLAST of MELO3C023233.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43890.1	3.7e-98	82.30	RAB GTPASE HOMOLOG B18	[more]
AT1G43890.2	3.7e-98	82.30	RAB GTPASE HOMOLOG B18	[more]
AT1G43890.3	3.7e-98	82.30	RAB GTPASE HOMOLOG B18	[more]
AT5G03530.1	1.5e-83	68.42	RAB GTPase homolog C2A	[more]
AT3G09910.1	9.9e-75	64.11	RAB GTPase homolog C2B	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 36..52 score: 29.26 coord: 118..131 score: 44.3 coord: 14..35 score: 52.76 coord: 54..76 score: 51.16 coord: 153..175 score: 41.29
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..204 e-value: 1.3E-4 score: 16.5
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..179 e-value: 0.002 score: 4.0
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..178 e-value: 6.8E-98 score: 341.2
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..178 e-value: 1.1E-30 score: 118.0
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 1..209
None	No IPR available	PANTHER	PTHR24073:SF1000	SMALL MONOMERIC GTPASE-RELATED	coord: 1..209
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..176 score: 10.1877
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..209 score: 32.31255
None	No IPR available	CDD	cd01863	Rab18	coord: 14..175 e-value: 3.57116E-105 score: 297.685
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..178 e-value: 2.8E-16 score: 70.1
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..176 e-value: 2.8E-55 score: 186.3
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 6..209 score: 18.012152
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 7..209 e-value: 4.6E-64 score: 217.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 10..188
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..170 e-value: 1.2E-29 score: 101.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C023233.jh1.t1	MELO3C023233.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding