MELO3C023190 (gene) Melon (DHL92) v4

Overview
NameMELO3C023190
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Descriptionribosome-binding factor PSRP1, chloroplastic
Locationchr11: 42824 .. 47248 (-)
RNA-Seq ExpressionMELO3C023190
SyntenyMELO3C023190
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTGCTTAGTTCAAGTTACATACCCTCTTGCTTAAAAAAACCCTCTTGCTTAAAAAAAAAAAGTTATATACCCTCTTTGACAAATATCAAAGGAGAAAAAGACAAAAACTGACATTGGCTTCCCATCATCCAGAGAAAAGAAAGAAAAGCCGCGCGGGTTGTTTATCCACTTGTTTCCCTTATTATCCTCATCGATTCCAAGTTTTGAACTCAACAATGGCGACTCTCACCTCTTCCATGCAGGCCAATCTTCTTTCTGATCACTCCTTACCTCCTCCTCACCCTTCTTCTTCTACCGTTTCTTACTTTCCCGCTCCCTTCTCTCTTCACTTCTCTGCGCTCAAAGTTCATGCTCTTTCTTCCAATGCTTCTGCTTTCTTCAACTCTTGCAAGAACTTTGGAACCATTGAGACTGCATCCCGTAACCGTCATGCCTCAAACTCTTTCAGTATTCGGATGACCTGGGACGGCCACCTCTCCTCTGTTAAATTAATTGTCCAAGGCAAAAATTTGGAGGTATTTTAGCTTCATCTTTGTTCTACAAGTTTTTCTTTTCATCTGTCTTCCTACTATGCTTAATTGTTCGAGTCTTTGGCATTTTCTATTTCTTCTCAAGTTTGATTCAGTAATTATTATCATAATGAATAGTTGTCACTTGGTTCCCCCACAAAACTCTACGTCTACCTGTTTGATACCCCATTCTCTATTATTCCAATCACCATATCCCTTCACTCAAACCCTAATTTTATTTTCTCCAAGTAAGTCTGCTAATTTCTGTCTCATTTCTTCAAATATCTTCCATATCAACCATTCATGTCCCTTCTCCATTTGTTACTCTTCACACCCCTTTGAAGTGAACGCATCGCATAAGGATTTCGCTATCATTTTTCAGAATCTCCTAATTTCTCATCCAATTTTGATATTCTATATTTCCACTTATTGCAGCTAGAAGATTGTTCTTTGGGTCAAAGAATCGGGTGCATTCACTTTCTTCTATATCGGCATCTTAACTTACTGGTTGACTCAAAAGCTTAACTTGATGCATTTGAGGAGAAAATAAAGAAGCCGTGGTTTAAACTCAGATTCCTCTAGATGAGATACCATCTTAAATCACCCATTGAGCCAAAAGTTTAACTTGTTGATGGGTGACATCAAACTTAATATTATATCATCTAAGGCAATATCTGAACCAAATTTATTCTTCTGTGCATTCTCATCAAACACAACCATTTTCTTTCATGATTATCACGTTCCAGGAAACACACAATGCCTACTTCACACTTCCCAATTTCAACCCTTATCTGCTCAAGGGAATCCTTTGTAAAATTGGATCACGATTTCTATAGGCCTCAATCTTTTTCACTTAATCCGAGCCACACAACTCAAGCTGTATCGTCCTGCTTAGTTCTTGAACATGATACACACAGCCAAAGCAGTCAACACATGTAATAAAAGACTGCTGCCTCTAAATTTTGTTTGGCCCTATATGTCTACCCCTAGTTATTGAAGTATTAGGATTATTAGTATGGTTATTAGAAGGGGCATTCTAGTAATTATCAAGTAAGTTTCTTAGGACCTTTAGTTAAAAATAAATGGAGTTGGTTGGTAGCAAGGTGTGGGTAGCAAGGTGTGGATCATTTTTATAGGAATTTCCATTGTGGGAATTTAAGGAAGTGTAGCCCTTTTGAAAGGCTATGGTATTCTAGTTTTTCCATTGATATTGCATTATAATCTTTTAGTGTTCATTGTTCTTGAGTGTTCTTATTTGGTGATAACCCATTCACACCTTAATCAAGATGATAGGGCTTTGACACCAGACATTAGGAATATGGTCTTGAAGAAATATAAGTGAGAGAAATATACTATTGAAAACGTGCAAAAAAATGATATGATAACAAAGTTTAATAAGGTGCTCATCACACTGAACTTGCCTACTAGATGCAGATAAAGAAATTATCTACTAATACTTGCTACTTTAATGGTTGAAACTCTGTTGCTTCAAGTGACAAGATCACCTACTAACTATAAATTCTAATATCTATTTCTAGATATTATCCAAGTTTCAGTTACCTAATTTATGGTAACTCAATGTTTAAATTTTATTTTTTTGTTTGCCCTTGAATTCCTATTCCTTCCCAATGAAAGCAGTTTGTTTCATAAAAAAAATGTTTAAATTTTAATACATCAAACATTGAGTGGATTTATTTTTAATTGTGCGAAAAAACTAGTTGACTGAAGCAGTTAAGAAGCACGTGGAAGAGAAGGTGGGCAAGGCAGTCCAGAAGCACAGTCACTTAGTTAGAGAAGTAGATGTCAGACTTTCAGTTAGAGGTGGGGAGTTTGGGAAGGGTCAAAGGATTAGAAGATGCGAGGTACTCTATTGCTCCTTTATTTTAAATTTATCCATATGAATTGAACCCTCGTTCTTTTCCAAAAATGTTTGTGTTTATATAGGTTACTTTATTCACAAAGAAGCATGGAGTTGTACGGGCAGAGGAAGATGCTGAGACCGTCTTTGCAAGCATTGATTTGGTATCCTCCATCATACAGAGGAAGTTGAGGAAGATTAAAGAGAAAGATTCTGACCGTGGCCGACATGTGAAAGGATTTGACAGATCAAAAGTAAGAGAACCTGCACCCATAGTAGTTGAAGATGAGGAAGAGGAAGTTTTTCAGGAAGATGGTGGAGAAGTTATTGACGAGGTTATTCCTTCAACCTTTGGGTTTTTACTTTTTCATTTTTCTGTATAGCATATACTAAACATTTAAGGTGATATTACCTTGTAAGCTCATGTATGCCATGCCTGTTAATTATTTTTCTACACGCCAAAGCTTATTACTAGTGTTAGAATTACTAAACCACATCTTTTCTCATTTAGTTATTGAAATCCTTGTATTCTAAGTTAAAAGAAACCACATCAATTTCGTAGTTTATTTTCTTGTTCCTTTCCAGTGATTAATATTGGAAAATTCTAGATGCAGTACTCAGTTTATTTGAACCATGTGCAATAATTTACTCCTTGCGTAGGAGTGAAGAATGGAAAGAAATGCATTCTCAATCTTGATTTCCTCCCTCTGATGTGCTATTTTCAACTGAATTTGGCTCAAACTCATCCTATTTTTATTTACATTATAGGATTGATAAGCCAGCTTATTTCATAACATGATATCCTAGATGAACATTGAAACATTGGAAGTTGGACCTTACAACTGGAAGATAGCATAGTTCGTAGGAGTCCGTTATCTGTTATTTCTCACTAAGCTGACATTGTGTTCAACTGTTATTTTATTGATCCTTTTCTCTTAATTTTTGTTGTCCATTCCGATGTACTTGATCGTTATAGCTTTTTATTTACTTACTGTTTATTTTGTTTACCTTCACTTTTGGTTGGAAGAAGCACTTTTGATGTTCATCCTTTTTAGATGACGATCATGTGTCATAAACTGGAAGCTCGTGAACATTATGCAGACGTGGATAAGATATTAAATTTTCCTTTTCATGCCAGCAATATTATTCTTTGGTATCTCATTACTCATTTTTATCTTGATTTCAGATTGTTCGGACAAAATACTTTGATATGCCACCTTTGACAGTTGAAGAAGCAATCGAACAACTCAAGAATATTGACCATGATTTCTATGGTTTCCGGAATGAAGAAACTGGTGCGTTGGTTTGATTATTACAATAATGTTGTTTTGTTGGGACTCTGCCGTTTATATCTTAGCTTATGTCTTTATCTTTGGCTTAGGTGAGATTAACATCTTATATAAAAGAAAGGATGGAGGATATGGACTTATTATCCCAAAAGAAAATGGCACAGCTGAGAAATTAGAGCCTGTGACAGTTGAAGCAGCGAGAGAACCATCCTTGGCGGAATGATGGGCCTTGGCGGAATGATGGGAATTGACGGAGGAAGTTTCACGTTCAGGATAGTTTACCACTGTTACCTTTGCTTAAAACTTCAAAACTTCAACTTCAACATGCATCTGAAGGCGTTTCTTGTAGAGTATATAGATTTAGATTTGAGGCTATTTGGTGATGAAGATAATATTGGAACAAGAAATGAGTAATAAGTAAAATAAGATGCAAAATATTCTAACGAATGAATGATTCAGCTTGCTGGGGTGTTACCATGAAAGTATATTCTAATGAAGAAATGATTCAACATTCATCTGAAATCTATTACCATCAACGGCCAGAAACCAAAAACTGACGAGGATCACCCCTAGTTTCTTAGTTATTATGAGATAATTTTCAAAAACTAAAGTTATTATTTTTATATTTGTTTTAGTTTTCAAAATATGTATTGTTAAACGAGAAATGTTGAATCATAGAAATTAAGATTATTTCTGTTTTGACTAATTAAAAGTTGTATGTATCTTGAATGAAAATTGAAGTAATAAATTGATAAATTTTAGTGAAAA

mRNA sequence

CTTGCTTAGTTCAAGTTACATACCCTCTTGCTTAAAAAAACCCTCTTGCTTAAAAAAAAAAAGTTATATACCCTCTTTGACAAATATCAAAGGAGAAAAAGACAAAAACTGACATTGGCTTCCCATCATCCAGAGAAAAGAAAGAAAAGCCGCGCGGGTTGTTTATCCACTTGTTTCCCTTATTATCCTCATCGATTCCAAGTTTTGAACTCAACAATGGCGACTCTCACCTCTTCCATGCAGGCCAATCTTCTTTCTGATCACTCCTTACCTCCTCCTCACCCTTCTTCTTCTACCGTTTCTTACTTTCCCGCTCCCTTCTCTCTTCACTTCTCTGCGCTCAAAGTTCATGCTCTTTCTTCCAATGCTTCTGCTTTCTTCAACTCTTGCAAGAACTTTGGAACCATTGAGACTGCATCCCGTAACCGTCATGCCTCAAACTCTTTCAGTATTCGGATGACCTGGGACGGCCACCTCTCCTCTGTTAAATTAATTGTCCAAGGCAAAAATTTGGAGTTGTCACTTGGTTCCCCCACAAAACTCTACGTCTACCTGTTTGATACCCCATTCTCTATTATTCCAATCACCATATCCCTTCACTCAAACCCTAATTTTATTTTCTCCAAGAAACACACAATGCCTACTTCACACTTCCCAATTTCAACCCTTATCTGCTCAAGGGAATCCTTTGTAAAATTGGATCACGATTTCTATAGGCCTCAATCTTTTTCACTTAATCCGAGCCACACAACTCAAGCTGTATCGTCCTGCTTAGTTCTTGAACATGATACACACAGCCAAAGCAGTCAACACATTGCGAAAAAACTAGTTGACTGAAGCAGTTAAGAAGCACGTGGAAGAGAAGGTGGGCAAGGCAGTCCAGAAGCACAGTCACTTAGTTAGAGAAGTAGATGTCAGACTTTCAGTTAGAGGTGGGGAGTTTGGGAAGGGTCAAAGGATTAGAAGATGCGAGGTTACTTTATTCACAAAGAAGCATGGAGTTGTACGGGCAGAGGAAGATGCTGAGACCGTCTTTGCAAGCATTGATTTGGTATCCTCCATCATACAGAGGAAGTTGAGGAAGATTAAAGAGAAAGATTCTGACCGTGGCCGACATGTGAAAGGATTTGACAGATCAAAAGTAAGAGAACCTGCACCCATAGTAGTTGAAGATGAGGAAGAGGAAGTTTTTCAGGAAGATGGTGGAGAAGTTATTGACGAGATTGTTCGGACAAAATACTTTGATATGCCACCTTTGACAGTTGAAGAAGCAATCGAACAACTCAAGAATATTGACCATGATTTCTATGGTTTCCGGAATGAAGAAACTGGTGAGATTAACATCTTATATAAAAGAAAGGATGGAGGATATGGACTTATTATCCCAAAAGAAAATGGCACAGCTGAGAAATTAGAGCCTGTGACAGTTGAAGCAGCGAGAGAACCATCCTTGGCGGAATGATGGGCCTTGGCGGAATGATGGGAATTGACGGAGGAAGTTTCACGTTCAGGATAGTTTACCACTGTTACCTTTGCTTAAAACTTCAAAACTTCAACTTCAACATGCATCTGAAGGCGTTTCTTGTAGAGTATATAGATTTAGATTTGAGGCTATTTGGTGATGAAGATAATATTGGAACAAGAAATGAGTAATAAGTAAAATAAGATGCAAAATATTCTAACGAATGAATGATTCAGCTTGCTGGGGTGTTACCATGAAAGTATATTCTAATGAAGAAATGATTCAACATTCATCTGAAATCTATTACCATCAACGGCCAGAAACCAAAAACTGACGAGGATCACCCCTAGTTTCTTAGTTATTATGAGATAATTTTCAAAAACTAAAGTTATTATTTTTATATTTGTTTTAGTTTTCAAAATATGTATTGTTAAACGAGAAATGTTGAATCATAGAAATTAAGATTATTTCTGTTTTGACTAATTAAAAGTTGTATGTATCTTGAATGAAAATTGAAGTAATAAATTGATAAATTTTAGTGAAAA

Coding sequence (CDS)

ATGGCGACTCTCACCTCTTCCATGCAGGCCAATCTTCTTTCTGATCACTCCTTACCTCCTCCTCACCCTTCTTCTTCTACCGTTTCTTACTTTCCCGCTCCCTTCTCTCTTCACTTCTCTGCGCTCAAAGTTCATGCTCTTTCTTCCAATGCTTCTGCTTTCTTCAACTCTTGCAAGAACTTTGGAACCATTGAGACTGCATCCCGTAACCGTCATGCCTCAAACTCTTTCAGTATTCGGATGACCTGGGACGGCCACCTCTCCTCTGTTAAATTAATTGTCCAAGGCAAAAATTTGGAGTTGTCACTTGGTTCCCCCACAAAACTCTACGTCTACCTGTTTGATACCCCATTCTCTATTATTCCAATCACCATATCCCTTCACTCAAACCCTAATTTTATTTTCTCCAAGAAACACACAATGCCTACTTCACACTTCCCAATTTCAACCCTTATCTGCTCAAGGGAATCCTTTGTAAAATTGGATCACGATTTCTATAGGCCTCAATCTTTTTCACTTAATCCGAGCCACACAACTCAAGCTGTATCGTCCTGCTTAGTTCTTGAACATGATACACACAGCCAAAGCAGTCAACACATTGCGAAAAAACTAGTTGACTGA

Protein sequence

MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELSLGSPTKLYVYLFDTPFSIIPITISLHSNPNFIFSKKHTMPTSHFPISTLICSRESFVKLDHDFYRPQSFSLNPSHTTQAVSSCLVLEHDTHSQSSQHIAKKLVD
Homology
[Close]
BLAST of MELO3C023190 vs. NCBI nr
Match: XP_008460813.1 (PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Cucumis melo] >TYK02023.1 ribosome-binding factor PSRP1 [Cucumis melo var. makuwa])

HSP 1 Score: 198.4 bits (503), Expect = 6.2e-47
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKN 60
           MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKN
Sbjct: 1   MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKN 60

Query: 61  FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELS 103
           FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLEL+
Sbjct: 61  FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELT 102

[Close]
BLAST of MELO3C023190 vs. NCBI nr
Match: XP_004147328.1 (ribosome-binding factor PSRP1, chloroplastic [Cucumis sativus] >KAE8651998.1 hypothetical protein Csa_016934 [Cucumis sativus])

HSP 1 Score: 181.4 bits (459), Expect = 7.8e-42
Identity = 96/102 (94.12%), Postives = 97/102 (95.10%), Query Frame = 0 

Query: 1   MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKN 60
           MATLTSSMQANLLSDHSL PP  SSSTVSYFPA FSLHFSALKVHALSSNASAFFNSCKN
Sbjct: 1   MATLTSSMQANLLSDHSLSPPFHSSSTVSYFPASFSLHFSALKVHALSSNASAFFNSCKN 60

Query: 61  FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELS 103
           FGTIETASRNRHASNSFSIRMTWDG LSSVKLIVQGKNLEL+
Sbjct: 61  FGTIETASRNRHASNSFSIRMTWDGPLSSVKLIVQGKNLELT 102

[Close]
BLAST of MELO3C023190 vs. NCBI nr
Match: XP_038900446.1 (ribosome-binding factor PSRP1, chloroplastic [Benincasa hispida])

HSP 1 Score: 140.6 bits (353), Expect = 1.5e-29
Identity = 79/105 (75.24%), Postives = 87/105 (82.86%), Query Frame = 0 

Query: 1   MATLTSSMQANLLSDHSL-PPPHPSSSTVSYFPAPFSLHFSALKVHAL--SSNASAFFNS 60
           MA LTSSM  +LL DHSL      SSST+S+FPA FSLHFSALKVHAL  SS ASAFFNS
Sbjct: 1   MAALTSSMHTSLLPDHSLSSSSSSSSSTISFFPASFSLHFSALKVHALSCSSTASAFFNS 60

Query: 61  CKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELS 103
           CK+F T ETASRNRHASNSF++RM+WDG LSSVKLIVQ KNLEL+
Sbjct: 61  CKSFRTFETASRNRHASNSFNVRMSWDGPLSSVKLIVQAKNLELT 105

[Close]
BLAST of MELO3C023190 vs. NCBI nr
Match: XP_023551717.1 (ribosome-binding factor PSRP1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 123.6 bits (309), Expect = 1.9e-24
Identity = 73/107 (68.22%), Postives = 82/107 (76.64%), Query Frame = 0 

Query: 1   MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSL----HFSALKVHALSSNASAFFN 60
           MA LTSSMQ NLLS HSL P   SS+TVS FP  FSL    + + LK+HALSS+ASAFFN
Sbjct: 1   MAALTSSMQTNLLSAHSLTPSSSSSTTVSTFPTSFSLPTSTNSAVLKIHALSSHASAFFN 60

Query: 61  SCKN-FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELS 103
           SC + F TI  A R RHA+ SFSIRM+WDG LSSVKLIVQGKNLEL+
Sbjct: 61  SCNHCFRTIVIAPRKRHATRSFSIRMSWDGPLSSVKLIVQGKNLELT 107

[Close]
BLAST of MELO3C023190 vs. NCBI nr
Match: XP_022922607.1 (ribosome-binding factor PSRP1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 119.0 bits (297), Expect = 4.8e-23
Identity = 74/109 (67.89%), Postives = 81/109 (74.31%), Query Frame = 0 

Query: 1   MATLTSSMQANLLSDHSLPP--PHPSSSTVSYFPAPFSL----HFSALKVHALSSNASAF 60
           MA LTSSMQ NLLS HSL P     SSSTVS FP  FSL    + + LK HALSS+ASAF
Sbjct: 1   MAALTSSMQTNLLSAHSLTPSSSSSSSSTVSTFPTSFSLPTSTNSAVLKTHALSSHASAF 60

Query: 61  FNSCKN-FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELS 103
           FNSC + F TI  A R RHA+ SFSIRM+WDG LSSVKLIVQGKNLEL+
Sbjct: 61  FNSCNHCFRTIVVAPRKRHATRSFSIRMSWDGPLSSVKLIVQGKNLELT 109

[Close]
BLAST of MELO3C023190 vs. ExPASy TrEMBL
Match: A0A5D3BQR1 (Ribosome-binding factor PSRP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00050 PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 3.0e-47
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKN 60
           MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKN
Sbjct: 1   MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKN 60

Query: 61  FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELS 103
           FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLEL+
Sbjct: 61  FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELT 102

[Close]
BLAST of MELO3C023190 vs. ExPASy TrEMBL
Match: A0A1S3CCT7 (ribosome-binding factor PSRP1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499579 PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 3.0e-47
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKN 60
           MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKN
Sbjct: 1   MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKN 60

Query: 61  FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELS 103
           FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLEL+
Sbjct: 61  FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELT 102

[Close]
BLAST of MELO3C023190 vs. ExPASy TrEMBL
Match: A0A0A0LMH1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G337790 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 3.8e-42
Identity = 96/102 (94.12%), Postives = 97/102 (95.10%), Query Frame = 0 

Query: 1   MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKN 60
           MATLTSSMQANLLSDHSL PP  SSSTVSYFPA FSLHFSALKVHALSSNASAFFNSCKN
Sbjct: 1   MATLTSSMQANLLSDHSLSPPFHSSSTVSYFPASFSLHFSALKVHALSSNASAFFNSCKN 60

Query: 61  FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELS 103
           FGTIETASRNRHASNSFSIRMTWDG LSSVKLIVQGKNLEL+
Sbjct: 61  FGTIETASRNRHASNSFSIRMTWDGPLSSVKLIVQGKNLELT 102

[Close]
BLAST of MELO3C023190 vs. ExPASy TrEMBL
Match: A0A6J1E3S3 (ribosome-binding factor PSRP1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111430564 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.3e-23
Identity = 74/109 (67.89%), Postives = 81/109 (74.31%), Query Frame = 0 

Query: 1   MATLTSSMQANLLSDHSLPP--PHPSSSTVSYFPAPFSL----HFSALKVHALSSNASAF 60
           MA LTSSMQ NLLS HSL P     SSSTVS FP  FSL    + + LK HALSS+ASAF
Sbjct: 1   MAALTSSMQTNLLSAHSLTPSSSSSSSSTVSTFPTSFSLPTSTNSAVLKTHALSSHASAF 60

Query: 61  FNSCKN-FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELS 103
           FNSC + F TI  A R RHA+ SFSIRM+WDG LSSVKLIVQGKNLEL+
Sbjct: 61  FNSCNHCFRTIVVAPRKRHATRSFSIRMSWDGPLSSVKLIVQGKNLELT 109

[Close]
BLAST of MELO3C023190 vs. ExPASy TrEMBL
Match: A0A6J1CJG5 (ribosome-binding factor PSRP1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111011561 PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 5.2e-23
Identity = 71/106 (66.98%), Postives = 79/106 (74.53%), Query Frame = 0 

Query: 1   MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSL----HFSALKVHALSSNASAFFN 60
           MATLTSSM  NLLS  S      SSST S FPA FSL    + SALK+H LSS+ S FFN
Sbjct: 1   MATLTSSMHTNLLSAPS------SSSTFSTFPASFSLLTSTNSSALKIHPLSSHTSPFFN 60

Query: 61  SCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELS 103
           SC  F TI+ A RNRHA+NSF+IRM+WDG LSSVKLIVQGKNLEL+
Sbjct: 61  SCNCFTTIQIAPRNRHAANSFTIRMSWDGPLSSVKLIVQGKNLELT 100

[Close]
BLAST of MELO3C023190 vs. TAIR 10
Match: AT5G24490.1 (30S ribosomal protein, putative )

HSP 1 Score: 48.5 bits (114), Expect = 7.4e-06
Identity = 23/43 (53.49%), Postives = 33/43 (76.74%), Query Frame = 0 

Query: 69  RNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELSLGSPTKLYV 112
           R+ +  +S +++M+WDG L+SVKLI+QGKNLELS   P K +V
Sbjct: 61  RHSYCRSSLAVKMSWDGPLASVKLIIQGKNLELS--EPIKQHV 101

The following BLAST results are available for this feature:
BLAST of MELO3C023190 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008460813.16.2e-4799.02PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Cucumis melo] >TYK02023... [more]
XP_004147328.17.8e-4294.12ribosome-binding factor PSRP1, chloroplastic [Cucumis sativus] >KAE8651998.1 hyp... [more]
XP_038900446.11.5e-2975.24ribosome-binding factor PSRP1, chloroplastic [Benincasa hispida][more]
XP_023551717.11.9e-2468.22ribosome-binding factor PSRP1, chloroplastic [Cucurbita pepo subsp. pepo][more]
XP_022922607.14.8e-2367.89ribosome-binding factor PSRP1, chloroplastic [Cucurbita moschata][more]
BLAST of MELO3C023190 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C023190 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BQR13.0e-4799.02Ribosome-binding factor PSRP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more]
A0A1S3CCT73.0e-4799.02ribosome-binding factor PSRP1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10349... [more]
A0A0A0LMH13.8e-4294.12Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G337790 PE=4 SV=1[more]
A0A6J1E3S32.3e-2367.89ribosome-binding factor PSRP1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LO... [more]
A0A6J1CJG55.2e-2366.98ribosome-binding factor PSRP1, chloroplastic OS=Momordica charantia OX=3673 GN=L... [more]
BLAST of MELO3C023190 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G24490.17.4e-0653.4930S ribosomal protein, putative [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C023190.1MELO3C023190.1mRNA