MELO3C023130 (gene) Melon (DHL92) v4

Overview


Name	MELO3C023130
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	RING finger protein 165-like protein
Location	chr08: 16455161 .. 16455959 (-)
RNA-Seq Expression	MELO3C023130
Synteny	MELO3C023130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCTCTCTACTTCTTCTTCCTTCCAATGTTCTTTTTCCGCCACTCCAAACACCGATCACTTCCTCATTTGTCGATTTGGGTATTCCAGCCGTCTCATCATTGTAGATCAAATACTGCAACAGACTCCCTCAATCCTCATGGGGGAAACTCTGATTCCTTTCTCTAATCTCTGGCATCCTGAACAACAACAATCAATTGAGTTTTTGGTTAATGAGTTTCTGGGTTCATTCAACCTCCATTCCTTTGCTTCTGCCCGCCGAACCATTTGTCGTAAGATTCTCTCCTTTGCTCTACAGTTTCATAACGTTCATGGGAGCTTCAAAATAGAAGCCAACGTCGAGCATGTGGAGGACTTGATCATCGGAGAGCAAGGATTTCAAGAAACTCCTTCCCCGCCAAGGACAACAGGGGCGCCGGAGTCTGCGATTGAGAGACTAAGGAAGGAGAAATTTGATGTATTAAATAAAGAAGAAGAAATTGGAGATTGCAGTGTTTGTTATGAAGAGCTGAAAGGACAAGGGAAGGAGGTGAGTAGGATACCATGTGGTCATGTGTATCACAAATCATGCATTCTCACTTGGCTTCAAATCAACAACTCTTGCCCACTGTGTAGAGCACCATTACAACCATGAACACTTTCTTCATTTTGCTTTTGAGAATTATCTTAATTCTCTTCCATTTTTTTTATTCTTTTAGAATTCTTATGCAAATGTAATTTTGTGCTCTCTTCCTTTCCAATGTAAGTTGGTACAAATATATATTTTGTCTAACTATTGATTGATACAGATTTGGGAG

mRNA sequence

ATGTCTCTCTCTACTTCTTCTTCCTTCCAATGTTCTTTTTCCGCCACTCCAAACACCGATCACTTCCTCATTTGTCGATTTGGGTATTCCAGCCGTCTCATCATTGTAGATCAAATACTGCAACAGACTCCCTCAATCCTCATGGGGGAAACTCTGATTCCTTTCTCTAATCTCTGGCATCCTGAACAACAACAATCAATTGAGTTTTTGGTTAATGAGTTTCTGGGTTCATTCAACCTCCATTCCTTTGCTTCTGCCCGCCGAACCATTTGTCGTAAGATTCTCTCCTTTGCTCTACAGTTTCATAACGTTCATGGGAGCTTCAAAATAGAAGCCAACGTCGAGCATGTGGAGGACTTGATCATCGGAGAGCAAGGATTTCAAGAAACTCCTTCCCCGCCAAGGACAACAGGGGCGCCGGAGTCTGCGATTGAGAGACTAAGGAAGGAGAAATTTGATGTATTAAATAAAGAAGAAGAAATTGGAGATTGCAGTGTTTGTTATGAAGAGCTGAAAGGACAAGGGAAGGAGGTGAGTAGGATACCATGTGGTCATGTGTATCACAAATCATGCATTCTCACTTGGCTTCAAATCAACAACTCTTGCCCACTGTGTAGAGCACCATTACAACCATGAACACTTTCTTCATTTTGCTTTTGAGAATTATCTTAATTCTCTTCCATTTTTTTTATTCTTTTAGAATTCTTATGCAAATGTAATTTTGTGCTCTCTTCCTTTCCAATGTAAGTTGGTACAAATATATATTTTGTCTAACTATTGATTGATACAGATTTGGGAG

Coding sequence (CDS)

ATGTCTCTCTCTACTTCTTCTTCCTTCCAATGTTCTTTTTCCGCCACTCCAAACACCGATCACTTCCTCATTTGTCGATTTGGGTATTCCAGCCGTCTCATCATTGTAGATCAAATACTGCAACAGACTCCCTCAATCCTCATGGGGGAAACTCTGATTCCTTTCTCTAATCTCTGGCATCCTGAACAACAACAATCAATTGAGTTTTTGGTTAATGAGTTTCTGGGTTCATTCAACCTCCATTCCTTTGCTTCTGCCCGCCGAACCATTTGTCGTAAGATTCTCTCCTTTGCTCTACAGTTTCATAACGTTCATGGGAGCTTCAAAATAGAAGCCAACGTCGAGCATGTGGAGGACTTGATCATCGGAGAGCAAGGATTTCAAGAAACTCCTTCCCCGCCAAGGACAACAGGGGCGCCGGAGTCTGCGATTGAGAGACTAAGGAAGGAGAAATTTGATGTATTAAATAAAGAAGAAGAAATTGGAGATTGCAGTGTTTGTTATGAAGAGCTGAAAGGACAAGGGAAGGAGGTGAGTAGGATACCATGTGGTCATGTGTATCACAAATCATGCATTCTCACTTGGCTTCAAATCAACAACTCTTGCCCACTGTGTAGAGCACCATTACAACCATGA

Protein sequence

MSLSTSSSFQCSFSATPNTDHFLICRFGYSSRLIIVDQILQQTPSILMGETLIPFSNLWHPEQQQSIEFLVNEFLGSFNLHSFASARRTICRKILSFALQFHNVHGSFKIEANVEHVEDLIIGEQGFQETPSPPRTTGAPESAIERLRKEKFDVLNKEEEIGDCSVCYEELKGQGKEVSRIPCGHVYHKSCILTWLQINNSCPLCRAPLQP

Homology

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BLAST of MELO3C023130 vs. NCBI nr
Match: KAA0043526.1 (RING finger protein 165-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 435.6 bits (1119), Expect = 2.4e-118
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MSLSTSSSFQCSFSATPNTDHFLICRFGYSSRLIIVDQILQQTPSILMGETLIPFSNLWH 60
           MSLSTSSSFQCSFSATPNTDHFLICRFGYSSRLIIVDQILQQTPSILMGETLIPFSNLWH
Sbjct: 95  MSLSTSSSFQCSFSATPNTDHFLICRFGYSSRLIIVDQILQQTPSILMGETLIPFSNLWH 154

Query: 61  PEQQQSIEFLVNEFLGSFNLHSFASARRTICRKILSFALQFHNVHGSFKIEANVEHVEDL 120
           PEQQQSIEFLVNEFLGSFNLHSFASARRTICRKILSFALQFHNVHGSFKIEANVEHVEDL
Sbjct: 155 PEQQQSIEFLVNEFLGSFNLHSFASARRTICRKILSFALQFHNVHGSFKIEANVEHVEDL 214

Query: 121 IIGEQGFQETPSPPRTTGAPESAIERLRKEKFDVLNKEEEIGDCSVCYEELKGQGKEVSR 180
           IIGEQGFQETPSPPRTTGAPESAIERLRKEKFDVLNKEEEIGDCSVCYEELKGQGKEVSR
Sbjct: 215 IIGEQGFQETPSPPRTTGAPESAIERLRKEKFDVLNKEEEIGDCSVCYEELKGQGKEVSR 274

Query: 181 IPCGHVYHKSCILTWLQINNSCPLCRAPLQP 212
           IPCGHVYHKSCILTWLQINNSCPLCRAPLQP
Sbjct: 275 IPCGHVYHKSCILTWLQINNSCPLCRAPLQP 305

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BLAST of MELO3C023130 vs. NCBI nr
Match: XP_008442291.1 (PREDICTED: RING finger protein 165-like [Cucumis melo] >KAA0041218.1 RING finger protein 165-like protein [Cucumis melo var. makuwa] >TYK16021.1 RING finger protein 165-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 270.8 bits (691), Expect = 1.0e-68
Identity = 136/166 (81.93%), Postives = 147/166 (88.55%), Query Frame = 0


Query: 48  MGETLIPFSNLWHPEQQQSIEFLVNEFLGSFNLHSFASARRTICRKILSFALQFHNVHGS 107
           MG+TLIPFSNL HP QQQSI+FLVN+FL SFNLHS  S RRTIC +ILSFALQF  +  S
Sbjct: 1   MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHS--SVRRTICHEILSFALQFRAILPS 60

Query: 108 FKIEANVEHVEDLIIGEQGFQETPSPPRTTGAPESAIERL-RKEKFDVLNK--EEEIGDC 167
           FKIEAN++HVEDLIIGEQGFQETP PPRT GAPESAIERL  K+KFD  NK  EEEIGDC
Sbjct: 61  FKIEANIDHVEDLIIGEQGFQETP-PPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDC 120

Query: 168 SVCYEELKGQGKEVSRIPCGHVYHKSCILTWLQINNSCPLCRAPLQ 211
           SVCYEELKG+GKEVSRIPCGHVYHKSC+LTWLQINNSCPLCRAPL+
Sbjct: 121 SVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLE 163

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BLAST of MELO3C023130 vs. NCBI nr
Match: XP_038876917.1 (E3 ubiquitin-protein ligase DZIP3-like [Benincasa hispida] >XP_038876930.1 E3 ubiquitin-protein ligase DZIP3-like [Benincasa hispida])

HSP 1 Score: 227.6 bits (579), Expect = 9.8e-56
Identity = 126/234 (53.85%), Postives = 157/234 (67.09%), Query Frame = 0


Query: 1   MSLSTSSSFQCSFSATPNTDHFLICRFGYSSRL--------IIVDQILQQTPSILMGETL 60
           MS ST+SS    F  TPN+D  L  RFG  SRL        II D+ILQQT S  +GE L
Sbjct: 1   MSFSTTSSIAYYFHGTPNSDQVLQVRFGVCSRLISRSPSPGIIPDRILQQTRSTPIGEAL 60

Query: 61  IPFSNLWHPEQQQSIEFLVNEFLGSFNLHSFASARRTICRKILSFALQFHNVHGSFKIEA 120
            PF+N+    ++ ++EFLVN FL SFNLHS  S  + + RKILSFA QF   +GSFKIEA
Sbjct: 61  FPFTNVRDVGEEAAVEFLVNGFLRSFNLHS--SVCQMMSRKILSFAQQFDANNGSFKIEA 120

Query: 121 NVEHVEDL------------IIGEQG----FQETPSPPRTTGAPESAIERLRKEKFDVLN 180
           N++++++             IIGE+G    F+E P P R  GAPESAIER+RK+KFD   
Sbjct: 121 NIDYMKEFWMEAVSWLHPNSIIGEEGFEINFEEGPPPARRAGAPESAIERVRKQKFDGFK 180

Query: 181 KEEEIGDCSVCYEELKGQGKEVSRIPCGHVYHKSCILTWLQINNSCPLCRAPLQ 211
           +EEE G+C VC E+LK +G EVSRIPCGHVYHKSCILTWL+ +N+CPLCR  L+
Sbjct: 181 EEEETGECCVCCEDLKRKGMEVSRIPCGHVYHKSCILTWLERSNTCPLCRRSLE 232

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BLAST of MELO3C023130 vs. NCBI nr
Match: XP_004139003.1 (E3 ubiquitin-protein ligase RING1 [Cucumis sativus] >KGN61460.1 hypothetical protein Csa_005955 [Cucumis sativus])

HSP 1 Score: 217.6 bits (553), Expect = 1.0e-52
Identity = 124/233 (53.22%), Postives = 151/233 (64.81%), Query Frame = 0


Query: 1   MSLSTSSSFQCSFSATPNTDHFLICRFGYSSRL--------IIVDQILQQTPSILMGETL 60
           MS S +S  QCSFS  PNTD  LI R  + SRL        I+ D IL+QTP  L+GE L
Sbjct: 1   MSFSATSCVQCSFSGYPNTDQTLIVRLRFCSRLISQSLAPEIVPDVILEQTPFTLIGEAL 60

Query: 61  IPFSNLWHPEQQQSIEFLVNEFLGSFNLHSFASARRTICRKILSFALQFHNVHGSFKIEA 120
              SNL +P QQQ +E++VNEFL SFNL S  S  R +   ILSFA QF   +  FKIE 
Sbjct: 61  FSLSNLQYPLQQQELEYMVNEFLRSFNLRS--SVCRIVSHNILSFAQQFDINNECFKIET 120

Query: 121 NVEHVEDL------------IIGEQGFQETPSPPRTTGAPESAIERLRKEKFDVL--NKE 180
           NV+++++              +GE+G      PPR  GA ESAIER++K+KFD     +E
Sbjct: 121 NVDYIKEYWTEAAPELYPISTVGEEGL-----PPR--GASESAIERVKKQKFDGFRGEEE 180

Query: 181 EEIGDCSVCYEELKGQGKEVSRIPCGHVYHKSCILTWLQINNSCPLCRAPLQP 212
           EEIGDCSVC EE+K +G EV RIPCGHVYHKSCIL WL+I+NSCPLCRA L+P
Sbjct: 181 EEIGDCSVCCEEIKRKGGEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 224

[Close]

BLAST of MELO3C023130 vs. NCBI nr
Match: XP_008457277.1 (PREDICTED: RING finger protein 165-like [Cucumis melo] >KAA0033274.1 RING finger protein 165-like [Cucumis melo var. makuwa] >TYK14831.1 RING finger protein 165-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 213.8 bits (543), Expect = 1.5e-51
Identity = 125/233 (53.65%), Postives = 150/233 (64.38%), Query Frame = 0


Query: 1   MSLSTSSSFQCSFSATPNTDHFLICRFGYSSRL--------IIVDQILQQTPSILMGETL 60
           MS S +S  +CSFS  PNTD  LI RFG  SRL        II D IL+QTP  L+GE L
Sbjct: 1   MSFSATSCLECSFSGYPNTDQTLIVRFGSCSRLISQSPSPEIIPDVILEQTPFTLIGEAL 60

Query: 61  IPFSNLWHPEQQQSIEFLVNEFLGSFNLHSFASARRTICRKILSFALQFHNVHGSFKIEA 120
              SNL  P QQQ +++LVNEFL SFNL S  S  R I   ILSFA QF   +   KIEA
Sbjct: 61  FSLSNLRCPLQQQELQYLVNEFLHSFNLRS--SVCRIISHNILSFAQQFDINNEWVKIEA 120

Query: 121 NVEHVEDL------------IIGEQGFQETPSPPRTTGAPESAIERLRKEKFDVLN--KE 180
           NV+H+++              +GE+G       PR  GA ESAIER++K+K D  +  +E
Sbjct: 121 NVDHIKEYWTEAPPELNPISTVGEEGLS-----PR--GASESAIERVKKQKLDWFSEEEE 180

Query: 181 EEIGDCSVCYEELKGQGKEVSRIPCGHVYHKSCILTWLQINNSCPLCRAPLQP 212
           EEIGDC VC EE+K +G+EV RIPCGHVYHKSCIL WL+I+NSCPLCRA L+P
Sbjct: 181 EEIGDCCVCCEEMKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 224

[Close]

BLAST of MELO3C023130 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.8e-13
Identity = 41/121 (33.88%), Postives = 65/121 (53.72%), Query Frame = 0


Query: 95  LSFALQFHNVHGSFKIEANV------EHVEDLIIGEQGFQETPSPPRTTGAPESAIERLR 154
           + F +Q +     F++ AN+        +E LI  +Q  +  P+   T  A +SAIE L 
Sbjct: 151 IEFVIQNNPSDQGFRLPANIGDYFIGPGLEQLI--QQLAENDPNRYGTPPASKSAIEALP 210

Query: 155 KEKFDVLNKEEEIGDCSVCYEELKGQGKEVSRIPCGHVYHKSCILTWLQINNSCPLCRAP 210
                  N   E   C+VC ++ + +G E  ++PC H+YHK C+L WL+++NSCP+CR  
Sbjct: 211 LVNITKSNLNSEFNQCAVCMDDFE-EGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHE 268

[Close]

BLAST of MELO3C023130 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.4e-11
Identity = 35/93 (37.63%), Postives = 56/93 (60.22%), Query Frame = 0


Query: 117 VEDLIIGEQGFQETPSPPRTTGAPESAIERLRKEKFDVLNKEEEIGDCSVCYEELKGQGK 176
           +E LI  +Q  +  P+   T  A +SAI+ L   K      + E+  C+VC +E +  G 
Sbjct: 171 LEQLI--QQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFE-DGS 230

Query: 177 EVSRIPCGHVYHKSCILTWLQINNSCPLCRAPL 210
           +V ++PC HV+H+ C+L WL+++NSCP+CR  L
Sbjct: 231 DVKQMPCKHVFHQDCLLPWLELHNSCPVCRFEL 260

[Close]

BLAST of MELO3C023130 vs. ExPASy Swiss-Prot
Match: Q6AVN2 (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 6.4e-10
Identity = 32/82 (39.02%), Postives = 48/82 (58.54%), Query Frame = 0


Query: 128 QETPSPPRTTGAPESAIERLRKEKFDVLNKEEEIGDCSVCYEELKGQGKEVSRIPCGHVY 187
           +  PS   T  A + A+E L   K       EE+  CSVC ++L+  G +  ++PC H +
Sbjct: 169 ESDPSRNGTPPAKKEAVEALPTVKI------EEVVSCSVCLDDLE-VGSQAKQMPCEHKF 228

Query: 188 HKSCILTWLQINNSCPLCRAPL 210
           H SCIL WL++++SCP+CR  L
Sbjct: 229 HSSCILPWLELHSSCPVCRFEL 243

[Close]

BLAST of MELO3C023130 vs. ExPASy Swiss-Prot
Match: Q9C1X4 (Uncharacterized RING finger protein P32A8.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAP32A8.03c PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-09
Identity = 28/73 (38.36%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 139 APESAIERLRKEKFDVLNKEEEIGDCSVCYEELKGQGKEVSRIPCGHVYHKSCILTWLQI 198
           APE  I +++ +K      +EE G+C++C E  K    +V ++PC H +H++CI  WL++
Sbjct: 372 APEDVIAKMKVQKPPKELIDEE-GECTICMEMFK-INDDVIQLPCKHYFHENCIKPWLRV 431

Query: 199 NNSCPLCRAPLQP 212
           N +C +CRAP+ P
Sbjct: 432 NGTCAICRAPVDP 442

[Close]

BLAST of MELO3C023130 vs. ExPASy Swiss-Prot
Match: Q9LZJ6 (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.9e-09
Identity = 27/70 (38.57%), Postives = 40/70 (57.14%), Query Frame = 0


Query: 142 SAIERLRKEKFDVLNKEEEIGDCSVCYEELKGQGKEVSRIPCGHVYHKSCILTWLQINNS 201
           + +E++    + V   E  + +CSVC  E +   +      CGHV+H  CI TW +  +S
Sbjct: 91  TVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSS 150

Query: 202 CPLCRAPLQP 212
           CPLCRAP+QP
Sbjct: 151 CPLCRAPVQP 160

[Close]

BLAST of MELO3C023130 vs. ExPASy TrEMBL
Match: A0A5A7TNB0 (RING finger protein 165-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00200 PE=4 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 1.1e-118
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MSLSTSSSFQCSFSATPNTDHFLICRFGYSSRLIIVDQILQQTPSILMGETLIPFSNLWH 60
           MSLSTSSSFQCSFSATPNTDHFLICRFGYSSRLIIVDQILQQTPSILMGETLIPFSNLWH
Sbjct: 95  MSLSTSSSFQCSFSATPNTDHFLICRFGYSSRLIIVDQILQQTPSILMGETLIPFSNLWH 154

Query: 61  PEQQQSIEFLVNEFLGSFNLHSFASARRTICRKILSFALQFHNVHGSFKIEANVEHVEDL 120
           PEQQQSIEFLVNEFLGSFNLHSFASARRTICRKILSFALQFHNVHGSFKIEANVEHVEDL
Sbjct: 155 PEQQQSIEFLVNEFLGSFNLHSFASARRTICRKILSFALQFHNVHGSFKIEANVEHVEDL 214

Query: 121 IIGEQGFQETPSPPRTTGAPESAIERLRKEKFDVLNKEEEIGDCSVCYEELKGQGKEVSR 180
           IIGEQGFQETPSPPRTTGAPESAIERLRKEKFDVLNKEEEIGDCSVCYEELKGQGKEVSR
Sbjct: 215 IIGEQGFQETPSPPRTTGAPESAIERLRKEKFDVLNKEEEIGDCSVCYEELKGQGKEVSR 274

Query: 181 IPCGHVYHKSCILTWLQINNSCPLCRAPLQP 212
           IPCGHVYHKSCILTWLQINNSCPLCRAPLQP
Sbjct: 275 IPCGHVYHKSCILTWLQINNSCPLCRAPLQP 305

[Close]

BLAST of MELO3C023130 vs. ExPASy TrEMBL
Match: A0A5D3CVT7 (RING finger protein 165-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00140 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 4.9e-69
Identity = 136/166 (81.93%), Postives = 147/166 (88.55%), Query Frame = 0


Query: 48  MGETLIPFSNLWHPEQQQSIEFLVNEFLGSFNLHSFASARRTICRKILSFALQFHNVHGS 107
           MG+TLIPFSNL HP QQQSI+FLVN+FL SFNLHS  S RRTIC +ILSFALQF  +  S
Sbjct: 1   MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHS--SVRRTICHEILSFALQFRAILPS 60

Query: 108 FKIEANVEHVEDLIIGEQGFQETPSPPRTTGAPESAIERL-RKEKFDVLNK--EEEIGDC 167
           FKIEAN++HVEDLIIGEQGFQETP PPRT GAPESAIERL  K+KFD  NK  EEEIGDC
Sbjct: 61  FKIEANIDHVEDLIIGEQGFQETP-PPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDC 120

Query: 168 SVCYEELKGQGKEVSRIPCGHVYHKSCILTWLQINNSCPLCRAPLQ 211
           SVCYEELKG+GKEVSRIPCGHVYHKSC+LTWLQINNSCPLCRAPL+
Sbjct: 121 SVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLE 163

[Close]

BLAST of MELO3C023130 vs. ExPASy TrEMBL
Match: A0A1S3B605 (RING finger protein 165-like OS=Cucumis melo OX=3656 GN=LOC103486202 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 4.9e-69
Identity = 136/166 (81.93%), Postives = 147/166 (88.55%), Query Frame = 0


Query: 48  MGETLIPFSNLWHPEQQQSIEFLVNEFLGSFNLHSFASARRTICRKILSFALQFHNVHGS 107
           MG+TLIPFSNL HP QQQSI+FLVN+FL SFNLHS  S RRTIC +ILSFALQF  +  S
Sbjct: 1   MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHS--SVRRTICHEILSFALQFRAILPS 60

Query: 108 FKIEANVEHVEDLIIGEQGFQETPSPPRTTGAPESAIERL-RKEKFDVLNK--EEEIGDC 167
           FKIEAN++HVEDLIIGEQGFQETP PPRT GAPESAIERL  K+KFD  NK  EEEIGDC
Sbjct: 61  FKIEANIDHVEDLIIGEQGFQETP-PPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDC 120

Query: 168 SVCYEELKGQGKEVSRIPCGHVYHKSCILTWLQINNSCPLCRAPLQ 211
           SVCYEELKG+GKEVSRIPCGHVYHKSC+LTWLQINNSCPLCRAPL+
Sbjct: 121 SVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLE 163

[Close]

BLAST of MELO3C023130 vs. ExPASy TrEMBL
Match: A0A0A0LHS2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G130680 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 4.9e-53
Identity = 124/233 (53.22%), Postives = 151/233 (64.81%), Query Frame = 0


Query: 1   MSLSTSSSFQCSFSATPNTDHFLICRFGYSSRL--------IIVDQILQQTPSILMGETL 60
           MS S +S  QCSFS  PNTD  LI R  + SRL        I+ D IL+QTP  L+GE L
Sbjct: 1   MSFSATSCVQCSFSGYPNTDQTLIVRLRFCSRLISQSLAPEIVPDVILEQTPFTLIGEAL 60

Query: 61  IPFSNLWHPEQQQSIEFLVNEFLGSFNLHSFASARRTICRKILSFALQFHNVHGSFKIEA 120
              SNL +P QQQ +E++VNEFL SFNL S  S  R +   ILSFA QF   +  FKIE 
Sbjct: 61  FSLSNLQYPLQQQELEYMVNEFLRSFNLRS--SVCRIVSHNILSFAQQFDINNECFKIET 120

Query: 121 NVEHVEDL------------IIGEQGFQETPSPPRTTGAPESAIERLRKEKFDVL--NKE 180
           NV+++++              +GE+G      PPR  GA ESAIER++K+KFD     +E
Sbjct: 121 NVDYIKEYWTEAAPELYPISTVGEEGL-----PPR--GASESAIERVKKQKFDGFRGEEE 180

Query: 181 EEIGDCSVCYEELKGQGKEVSRIPCGHVYHKSCILTWLQINNSCPLCRAPLQP 212
           EEIGDCSVC EE+K +G EV RIPCGHVYHKSCIL WL+I+NSCPLCRA L+P
Sbjct: 181 EEIGDCSVCCEEIKRKGGEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 224

[Close]

BLAST of MELO3C023130 vs. ExPASy TrEMBL
Match: A0A5D3CSM6 (RING finger protein 165-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold472G00260 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 7.1e-52
Identity = 125/233 (53.65%), Postives = 150/233 (64.38%), Query Frame = 0


Query: 1   MSLSTSSSFQCSFSATPNTDHFLICRFGYSSRL--------IIVDQILQQTPSILMGETL 60
           MS S +S  +CSFS  PNTD  LI RFG  SRL        II D IL+QTP  L+GE L
Sbjct: 1   MSFSATSCLECSFSGYPNTDQTLIVRFGSCSRLISQSPSPEIIPDVILEQTPFTLIGEAL 60

Query: 61  IPFSNLWHPEQQQSIEFLVNEFLGSFNLHSFASARRTICRKILSFALQFHNVHGSFKIEA 120
              SNL  P QQQ +++LVNEFL SFNL S  S  R I   ILSFA QF   +   KIEA
Sbjct: 61  FSLSNLRCPLQQQELQYLVNEFLHSFNLRS--SVCRIISHNILSFAQQFDINNEWVKIEA 120

Query: 121 NVEHVEDL------------IIGEQGFQETPSPPRTTGAPESAIERLRKEKFDVLN--KE 180
           NV+H+++              +GE+G       PR  GA ESAIER++K+K D  +  +E
Sbjct: 121 NVDHIKEYWTEAPPELNPISTVGEEGLS-----PR--GASESAIERVKKQKLDWFSEEEE 180

Query: 181 EEIGDCSVCYEELKGQGKEVSRIPCGHVYHKSCILTWLQINNSCPLCRAPLQP 212
           EEIGDC VC EE+K +G+EV RIPCGHVYHKSCIL WL+I+NSCPLCRA L+P
Sbjct: 181 EEIGDCCVCCEEMKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 224

[Close]

BLAST of MELO3C023130 vs. TAIR 10
Match: AT1G60360.1 (RING/U-box superfamily protein )

HSP 1 Score: 70.1 bits (170), Expect = 2.4e-12
Identity = 37/107 (34.58%), Postives = 55/107 (51.40%), Query Frame = 0


Query: 103 NVHGSFKIEANVEHVEDLIIGEQGFQETPSPPRTTGAPESAIERLRKEKFDVLNKEEEIG 162
           N H  F   +++E     +I +    + P PP    A E  I  L   K    +   ++ 
Sbjct: 170 NSHDYFTGASSLEQ----LIEQLTQDDRPGPP---PASEPTINSLPSVKITPQHLTNDMS 229

Query: 163 DCSVCYEELKGQGKEVSRIPCGHVYHKSCILTWLQINNSCPLCRAPL 210
            C+VC EE    G + + +PC H+YHK CI+ WL++NNSCP+CR  L
Sbjct: 230 QCTVCMEEFI-VGGDATELPCKHIYHKDCIVPWLRLNNSCPICRRDL 268

[Close]

BLAST of MELO3C023130 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 70.1 bits (170), Expect = 2.4e-12
Identity = 35/93 (37.63%), Postives = 56/93 (60.22%), Query Frame = 0


Query: 117 VEDLIIGEQGFQETPSPPRTTGAPESAIERLRKEKFDVLNKEEEIGDCSVCYEELKGQGK 176
           +E LI  +Q  +  P+   T  A +SAI+ L   K      + E+  C+VC +E +  G 
Sbjct: 171 LEQLI--QQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFE-DGS 230

Query: 177 EVSRIPCGHVYHKSCILTWLQINNSCPLCRAPL 210
           +V ++PC HV+H+ C+L WL+++NSCP+CR  L
Sbjct: 231 DVKQMPCKHVFHQDCLLPWLELHNSCPVCRFEL 260

[Close]

BLAST of MELO3C023130 vs. TAIR 10
Match: AT5G60820.1 (RING/U-box superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 7.8e-11
Identity = 27/57 (47.37%), Postives = 38/57 (66.67%), Query Frame = 0


Query: 153 DVLNKEEEIGDCSVCYEELKGQGKEVSRIPCGHVYHKSCILTWLQINNSCPLCRAPL 210
           DV+  +++   C+VC EE+   GKEV+ +PC H YH  CI+ WL I N+CP+CR  L
Sbjct: 361 DVMENDDDAVCCAVCKEEMI-VGKEVAELPCRHKYHSECIVPWLGIRNTCPVCRFEL 416

[Close]

BLAST of MELO3C023130 vs. TAIR 10
Match: AT2G40830.2 (RING-H2 finger C1A )

HSP 1 Score: 64.3 bits (155), Expect = 1.3e-10
Identity = 29/71 (40.85%), Postives = 40/71 (56.34%), Query Frame = 0


Query: 139 APESAIERLRKEKFDVLNKEEEIGDCSVCYEELKGQGKEVSRIPCGHVYHKSCILTWLQI 198
           AP SAI+ L   K    +      +C VC +E +  G E  ++PC H+YH  CI+ WL  
Sbjct: 165 APRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFE-LGSEAKQMPCNHIYHSDCIVPWLVQ 224

Query: 199 NNSCPLCRAPL 210
           +NSCP+CR  L
Sbjct: 225 HNSCPVCRQEL 234

[Close]

BLAST of MELO3C023130 vs. TAIR 10
Match: AT2G40830.1 (RING-H2 finger C1A )

HSP 1 Score: 64.3 bits (155), Expect = 1.3e-10
Identity = 29/71 (40.85%), Postives = 40/71 (56.34%), Query Frame = 0


Query: 139 APESAIERLRKEKFDVLNKEEEIGDCSVCYEELKGQGKEVSRIPCGHVYHKSCILTWLQI 198
           AP SAI+ L   K    +      +C VC +E +  G E  ++PC H+YH  CI+ WL  
Sbjct: 165 APRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFE-LGSEAKQMPCNHIYHSDCIVPWLVQ 224

Query: 199 NNSCPLCRAPL 210
           +NSCP+CR  L
Sbjct: 225 HNSCPVCRQEL 234

The following BLAST results are available for this feature:

BLAST of MELO3C023130 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0043526.1	2.4e-118	100.00	RING finger protein 165-like protein [Cucumis melo var. makuwa]	[more]
XP_008442291.1	1.0e-68	81.93	PREDICTED: RING finger protein 165-like [Cucumis melo] >KAA0041218.1 RING finger...	[more]
XP_038876917.1	9.8e-56	53.85	E3 ubiquitin-protein ligase DZIP3-like [Benincasa hispida] >XP_038876930.1 E3 ub...	[more]
XP_004139003.1	1.0e-52	53.22	E3 ubiquitin-protein ligase RING1 [Cucumis sativus] >KGN61460.1 hypothetical pro...	[more]
XP_008457277.1	1.5e-51	53.65	PREDICTED: RING finger protein 165-like [Cucumis melo] >KAA0033274.1 RING finger...	[more]

BLAST of MELO3C023130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CH30	4.8e-13	33.88	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q8LPN7	3.4e-11	37.63	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
Q6AVN2	6.4e-10	39.02	E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SI...	[more]
Q9C1X4	1.1e-09	38.36	Uncharacterized RING finger protein P32A8.03c OS=Schizosaccharomyces pombe (stra...	[more]
Q9LZJ6	1.9e-09	38.57	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1	[more]

BLAST of MELO3C023130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TNB0	1.1e-118	100.00	RING finger protein 165-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3CVT7	4.9e-69	81.93	RING finger protein 165-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3B605	4.9e-69	81.93	RING finger protein 165-like OS=Cucumis melo OX=3656 GN=LOC103486202 PE=4 SV=1	[more]
A0A0A0LHS2	4.9e-53	53.22	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G130680 P...	[more]
A0A5D3CSM6	7.1e-52	53.65	RING finger protein 165-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]

BLAST of MELO3C023130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60360.1	2.4e-12	34.58	RING/U-box superfamily protein	[more]
AT3G19950.1	2.4e-12	37.63	RING/U-box superfamily protein	[more]
AT5G60820.1	7.8e-11	47.37	RING/U-box superfamily protein	[more]
AT2G40830.2	1.3e-10	40.85	RING-H2 finger C1A	[more]
AT2G40830.1	1.3e-10	40.85	RING-H2 finger C1A	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 164..205 e-value: 3.5E-8 score: 43.2
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 163..206 e-value: 1.7E-13 score: 50.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 164..206 score: 13.359705
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 139..210 e-value: 2.4E-20 score: 73.5
None	No IPR available	PANTHER	PTHR45931	SI:CH211-59O9.10	coord: 68..210
None	No IPR available	PANTHER	PTHR45931:SF9	E3 UBIQUITIN-PROTEIN LIGASE RNF12-B-LIKE	coord: 68..210
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 157..209

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C023130.1	MELO3C023130.1	mRNA