MELO3C023121.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C023121.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Protein MNN4-like
Location	chr08: 16262897 .. 16263199 (+)
RNA-Seq Expression	MELO3C023121.jh1
Synteny	MELO3C023121.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAACAAATCCTCAAGCCTCCCTACAATCCCAAGAATCCAAACCCATAAAATCCAAATCGCCACGTCCCATCACTGACCTGACCACCACTTCCTCGCCCAGGCATGAATCTAATAAGGATCTTGCCCTTATTTTGATTGAGTCAACTGGAACCTCCTTATCGCGTCAAGAGGAAACTCCTCAACCTTTTGATGCAATCCCTCCCAACCAAACCAAATCACCTAGCCCTGAAACTTTGAATTACAATGTCTTCCACGAAACCTCCTCTGACCCAGCAACATTGTTGGATAATGCGACTTAG

mRNA sequence

ATGCCAACAAATCCTCAAGCCTCCCTACAATCCCAAGAATCCAAACCCATAAAATCCAAATCGCCACGTCCCATCACTGACCTGACCACCACTTCCTCGCCCAGGCATGAATCTAATAAGGATCTTGCCCTTATTTTGATTGAGTCAACTGGAACCTCCTTATCGCGTCAAGAGGAAACTCCTCAACCTTTTGATGCAATCCCTCCCAACCAAACCAAATCACCTAGCCCTGAAACTTTGAATTACAATGTCTTCCACGAAACCTCCTCTGACCCAGCAACATTGTTGGATAATGCGACTTAG

Coding sequence (CDS)

ATGCCAACAAATCCTCAAGCCTCCCTACAATCCCAAGAATCCAAACCCATAAAATCCAAATCGCCACGTCCCATCACTGACCTGACCACCACTTCCTCGCCCAGGCATGAATCTAATAAGGATCTTGCCCTTATTTTGATTGAGTCAACTGGAACCTCCTTATCGCGTCAAGAGGAAACTCCTCAACCTTTTGATGCAATCCCTCCCAACCAAACCAAATCACCTAGCCCTGAAACTTTGAATTACAATGTCTTCCACGAAACCTCCTCTGACCCAGCAACATTGTTGGATAATGCGACTTAG

Protein sequence

MPTNPQASLQSQESKPIKSKSPRPITDLTTTSSPRHESNKDLALILIESTGTSLSRQEETPQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT

Homology

[Close]

BLAST of MELO3C023121.jh1 vs. NCBI nr
Match: KAA0056132.1 (hypothetical protein E6C27_scaffold697G00110 [Cucumis melo var. makuwa])

HSP 1 Score: 193 bits (491), Expect = 5.64e-62
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MPTNPQASLQSQESKPIKSKSPRPITDLTTTSSPRHESNKDLALILIESTGTSLSRQEET 60
           MPTNPQASLQSQESKPIKSKSPRPITDLTTTSSPRHESNKDLALILIESTGTSLSRQEET
Sbjct: 1   MPTNPQASLQSQESKPIKSKSPRPITDLTTTSSPRHESNKDLALILIESTGTSLSRQEET 60

Query: 61  PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT 100
           PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT
Sbjct: 61  PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT 100

[Close]

BLAST of MELO3C023121.jh1 vs. NCBI nr
Match: TYK14137.1 (hypothetical protein E5676_scaffold513G00050 [Cucumis melo var. makuwa])

HSP 1 Score: 182 bits (462), Expect = 1.50e-57
Identity = 94/100 (94.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MPTNPQASLQSQESKPIKSKSPRPITDLTTTSSPRHESNKDLALILIESTGTSLSRQEET 60
           MPT PQASLQSQE KPIKSKSPRPITDLTTTSSPRH+SNKD AL+LIESTGTSLS QEET
Sbjct: 1   MPTKPQASLQSQEFKPIKSKSPRPITDLTTTSSPRHKSNKDRALLLIESTGTSLSHQEET 60

Query: 61  PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT 100
           PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT
Sbjct: 61  PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT 100

[Close]

BLAST of MELO3C023121.jh1 vs. NCBI nr
Match: KAA0039027.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 126 bits (316), Expect = 1.59e-32
Identity = 69/99 (69.70%), Postives = 76/99 (76.77%), Query Frame = 0


Query: 2   PTNPQASLQSQESKPIKSKSPRPITDLTTTSSPRHESNKDLALILIESTGTSLSRQEETP 61
           PT PQA  QSQ+SK  KSKSP  I DLTTTSSPRHE++KD AL+L ES  TS   QE+TP
Sbjct: 232 PTKPQACPQSQKSKTTKSKSPPLINDLTTTSSPRHETDKDRALVLFESIKTSFLHQEKTP 291

Query: 62  QPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT 100
           QP DAIP NQTK PSP+T N +VFHETS DP TLLD AT
Sbjct: 292 QPLDAIPINQTKLPSPKTSNQDVFHETSFDPTTLLDEAT 330

[Close]

BLAST of MELO3C023121.jh1 vs. NCBI nr
Match: ADN34138.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 119 bits (297), Expect = 8.20e-32
Identity = 66/100 (66.00%), Postives = 73/100 (73.00%), Query Frame = 0


Query: 1   MPTNPQASLQSQESKPIKSKSPRPITDLTTTSSPRHESNKDLALILIESTGTSLSRQEET 60
           MPT  + S QSQ+SKP KSKSP PI  LTTTSSP+H++NK   LIL    GTSL  QEET
Sbjct: 1   MPTTSRVSPQSQKSKPTKSKSPPPIEKLTTTSSPKHKTNKKCVLILFYLAGTSLPCQEET 60

Query: 61  PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT 100
           PQP DAIP NQ K PSPET N +VFHET   P TLLD+AT
Sbjct: 61  PQPLDAIPINQAKPPSPETSNQDVFHETFYVPTTLLDDAT 100

[Close]

BLAST of MELO3C023121.jh1 vs. NCBI nr
Match: KAA0066950.1 (hypothetical protein E6C27_scaffold550G00860 [Cucumis melo var. makuwa] >TYK30231.1 hypothetical protein E5676_scaffold595G00540 [Cucumis melo var. makuwa])

HSP 1 Score: 116 bits (290), Expect = 9.46e-31
Identity = 65/100 (65.00%), Postives = 73/100 (73.00%), Query Frame = 0


Query: 1   MPTNPQASLQSQESKPIKSKSPRPITDLTTTSSPRHESNKDLALILIESTGTSLSRQEET 60
           MPT  + S QSQ+SKP KSKSP PI  LTTTSSP+ ++NK+  LIL    GTSL  QEET
Sbjct: 1   MPTTSRVSPQSQKSKPTKSKSPPPIEKLTTTSSPKDKTNKNCVLILFYLAGTSLPCQEET 60

Query: 61  PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT 100
           PQP DAIP NQ K PSPET N +VFHET   P TLLD+AT
Sbjct: 61  PQPLDAIPINQAKPPSPETSNQDVFHETFYVPTTLLDDAT 100

[Close]

BLAST of MELO3C023121.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UJT2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold697G00110 PE=4 SV=1)

HSP 1 Score: 193 bits (491), Expect = 2.73e-62
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MPTNPQASLQSQESKPIKSKSPRPITDLTTTSSPRHESNKDLALILIESTGTSLSRQEET 60
           MPTNPQASLQSQESKPIKSKSPRPITDLTTTSSPRHESNKDLALILIESTGTSLSRQEET
Sbjct: 1   MPTNPQASLQSQESKPIKSKSPRPITDLTTTSSPRHESNKDLALILIESTGTSLSRQEET 60

Query: 61  PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT 100
           PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT
Sbjct: 61  PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT 100

[Close]

BLAST of MELO3C023121.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CQE3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold513G00050 PE=4 SV=1)

HSP 1 Score: 182 bits (462), Expect = 7.26e-58
Identity = 94/100 (94.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MPTNPQASLQSQESKPIKSKSPRPITDLTTTSSPRHESNKDLALILIESTGTSLSRQEET 60
           MPT PQASLQSQE KPIKSKSPRPITDLTTTSSPRH+SNKD AL+LIESTGTSLS QEET
Sbjct: 1   MPTKPQASLQSQEFKPIKSKSPRPITDLTTTSSPRHKSNKDRALLLIESTGTSLSHQEET 60

Query: 61  PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT 100
           PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT
Sbjct: 61  PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT 100

[Close]

BLAST of MELO3C023121.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TBR6 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G001140 PE=4 SV=1)

HSP 1 Score: 126 bits (316), Expect = 7.68e-33
Identity = 69/99 (69.70%), Postives = 76/99 (76.77%), Query Frame = 0


Query: 2   PTNPQASLQSQESKPIKSKSPRPITDLTTTSSPRHESNKDLALILIESTGTSLSRQEETP 61
           PT PQA  QSQ+SK  KSKSP  I DLTTTSSPRHE++KD AL+L ES  TS   QE+TP
Sbjct: 232 PTKPQACPQSQKSKTTKSKSPPLINDLTTTSSPRHETDKDRALVLFESIKTSFLHQEKTP 291

Query: 62  QPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT 100
           QP DAIP NQTK PSP+T N +VFHETS DP TLLD AT
Sbjct: 292 QPLDAIPINQTKLPSPKTSNQDVFHETSFDPTTLLDEAT 330

[Close]

BLAST of MELO3C023121.jh1 vs. ExPASy TrEMBL
Match: E5GCD9 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 119 bits (297), Expect = 3.97e-32
Identity = 66/100 (66.00%), Postives = 73/100 (73.00%), Query Frame = 0


Query: 1   MPTNPQASLQSQESKPIKSKSPRPITDLTTTSSPRHESNKDLALILIESTGTSLSRQEET 60
           MPT  + S QSQ+SKP KSKSP PI  LTTTSSP+H++NK   LIL    GTSL  QEET
Sbjct: 1   MPTTSRVSPQSQKSKPTKSKSPPPIEKLTTTSSPKHKTNKKCVLILFYLAGTSLPCQEET 60

Query: 61  PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT 100
           PQP DAIP NQ K PSPET N +VFHET   P TLLD+AT
Sbjct: 61  PQPLDAIPINQAKPPSPETSNQDVFHETFYVPTTLLDDAT 100

[Close]

BLAST of MELO3C023121.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VIC3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold595G00540 PE=4 SV=1)

HSP 1 Score: 116 bits (290), Expect = 4.58e-31
Identity = 65/100 (65.00%), Postives = 73/100 (73.00%), Query Frame = 0


Query: 1   MPTNPQASLQSQESKPIKSKSPRPITDLTTTSSPRHESNKDLALILIESTGTSLSRQEET 60
           MPT  + S QSQ+SKP KSKSP PI  LTTTSSP+ ++NK+  LIL    GTSL  QEET
Sbjct: 1   MPTTSRVSPQSQKSKPTKSKSPPPIEKLTTTSSPKDKTNKNCVLILFYLAGTSLPCQEET 60

Query: 61  PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT 100
           PQP DAIP NQ K PSPET N +VFHET   P TLLD+AT
Sbjct: 61  PQPLDAIPINQAKPPSPETSNQDVFHETFYVPTTLLDDAT 100

The following BLAST results are available for this feature:

BLAST of MELO3C023121.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056132.1	5.64e-62	100.00	hypothetical protein E6C27_scaffold697G00110 [Cucumis melo var. makuwa]	[more]
TYK14137.1	1.50e-57	94.00	hypothetical protein E5676_scaffold513G00050 [Cucumis melo var. makuwa]	[more]
KAA0039027.1	1.59e-32	69.70	protein MNN4-like [Cucumis melo var. makuwa]	[more]
ADN34138.1	8.20e-32	66.00	hypothetical protein [Cucumis melo subsp. melo]	[more]
KAA0066950.1	9.46e-31	65.00	hypothetical protein E6C27_scaffold550G00860 [Cucumis melo var. makuwa] >TYK3023...	[more]

BLAST of MELO3C023121.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C023121.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UJT2	2.73e-62	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CQE3	7.26e-58	94.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TBR6	7.68e-33	69.70	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G001...	[more]
E5GCD9	3.97e-32	66.00	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A5A7VIC3	4.58e-31	65.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MELO3C023121.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C023121.jh1.t1	MELO3C023121.jh1.t1	mRNA