MELO3C023070 (gene) Melon (DHL92) v4

Overview


Name	MELO3C023070
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	small acidic protein 1
Location	chr05: 6855292 .. 6855958 (-)
RNA-Seq Expression	MELO3C023070
Synteny	MELO3C023070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAATGAGTCATTATAGAACTTGTTTTAATATTTAGGTTACTTTATCAAGGTTTCTTCTCAAATTCCCATTCGGCCAAGTTACAAATTCAAACAAGTCTATTTGGTTTCCATTGTTCATTTGGTTGCCACGGAGATGAGATCTTCACCGATGGAGTTCTTTGCGGAGCTGGAAGAACAGGGATCCACGGTCGCCATGGACGTCGACGATGTAGACCCACTTGAGATATTGGGCGAGGGTGTGATCTCCGCCGAGAACAAGCTCGCCGACGCCGATTTCTTCAACTCCTTCGAGGATGATTTTGATGACTCTGACGTCAACTGAGATTCTTTTTCGTGGTTTCCTTCAAAACAAGTAGTTAATTTCCCAATTCTATGTTCTTACTTCTCTTGATCAAACAAAGTTGATAGATCCTACCATGCCCTAGTTTGTTTCAGTCTTTAGGGATTTCACTGGTTTGCTTGGTGATAAGTTGAATACTTTTAACATGTTTTACTTTCTGAATTACTTGATTGGTTATCCCATAGTTTCTTTTCTCTCAAGCGTGGTGGTTAGCCTTGTAATTGTCATTAGTTGCAACGAAAAAGGGGAATGTGTTTATATATAACAGAAAATGTGAGAAACTGTGTACTTTGTTGCCACATAATTTTAGAGTGATTTTGAAATAG

mRNA sequence

GAAATGAGTCATTATAGAACTTGTTTTAATATTTAGGTTACTTTATCAAGGTTTCTTCTCAAATTCCCATTCGGCCAAGTTACAAATTCAAACAAGTCTATTTGGTTTCCATTGTTCATTTGGTTGCCACGGAGATGAGATCTTCACCGATGGAGTTCTTTGCGGAGCTGGAAGAACAGGGATCCACGGTCGCCATGGACGTCGACGATGTAGACCCACTTGAGATATTGGGCGAGGGTGTGATCTCCGCCGAGAACAAGCTCGCCGACGCCGATTTCTTCAACTCCTTCGAGGATGATTTTGATGACTCTGACGTCAACTGAGATTCTTTTTCGTGGTTTCCTTCAAAACAAGTAGTTAATTTCCCAATTCTATGTTCTTACTTCTCTTGATCAAACAAAGTTGATAGATCCTACCATGCCCTAGTTTGTTTCAGTCTTTAGGGATTTCACTGGTTTGCTTGGTGATAAGTTGAATACTTTTAACATGTTTTACTTTCTGAATTACTTGATTGGTTATCCCATAGTTTCTTTTCTCTCAAGCGTGGTGGTTAGCCTTGTAATTGTCATTAGTTGCAACGAAAAAGGGGAATGTGTTTATATATAACAGAAAATGTGAGAAACTGTGTACTTTGTTGCCACATAATTTTAGAGTGATTTTGAAATAG

Coding sequence (CDS)

ATGAGATCTTCACCGATGGAGTTCTTTGCGGAGCTGGAAGAACAGGGATCCACGGTCGCCATGGACGTCGACGATGTAGACCCACTTGAGATATTGGGCGAGGGTGTGATCTCCGCCGAGAACAAGCTCGCCGACGCCGATTTCTTCAACTCCTTCGAGGATGATTTTGATGACTCTGACGTCAACTGA

Protein sequence

MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN

Homology

[Close]

BLAST of MELO3C023070 vs. NCBI nr
Match: XP_008460713.1 (PREDICTED: small acidic protein 1 [Cucumis melo] >KAA0031980.1 small acidic protein 1 [Cucumis melo var. makuwa] >TYK16800.1 small acidic protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 120.6 bits (301), Expect = 4.9e-24
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
          MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD
Sbjct: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60

Query: 61 VN 63
          VN
Sbjct: 61 VN 62

[Close]

BLAST of MELO3C023070 vs. NCBI nr
Match: XP_004147176.1 (small acidic protein 1 [Cucumis sativus] >KGN61541.1 hypothetical protein Csa_023613 [Cucumis sativus])

HSP 1 Score: 120.2 bits (300), Expect = 6.5e-24
Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
          MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD
Sbjct: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60

Query: 61 VN 63
          +N
Sbjct: 61 IN 62

[Close]

BLAST of MELO3C023070 vs. NCBI nr
Match: XP_038875245.1 (small acidic protein 1 [Benincasa hispida])

HSP 1 Score: 117.1 bits (292), Expect = 5.5e-23
Identity = 59/62 (95.16%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
          MR +PMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD
Sbjct: 1  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60

Query: 61 VN 63
          +N
Sbjct: 61 IN 62

[Close]

BLAST of MELO3C023070 vs. NCBI nr
Match: KAG6593800.1 (Small acidic protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 116.3 bits (290), Expect = 9.3e-23
Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 1   MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
           MR +PMEFFAE+EEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD
Sbjct: 42  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 101

Query: 61  VN 63
           +N
Sbjct: 102 IN 103

[Close]

BLAST of MELO3C023070 vs. NCBI nr
Match: XP_022964281.1 (small acidic protein 1 [Cucurbita moschata] >XP_022964282.1 small acidic protein 1 [Cucurbita moschata] >XP_022964283.1 small acidic protein 1 [Cucurbita moschata] >XP_022964284.1 small acidic protein 1 [Cucurbita moschata] >XP_023000574.1 small acidic protein 1 [Cucurbita maxima] >XP_023000575.1 small acidic protein 1 [Cucurbita maxima] >XP_023000576.1 small acidic protein 1 [Cucurbita maxima] >XP_023000577.1 small acidic protein 1 [Cucurbita maxima])

HSP 1 Score: 116.3 bits (290), Expect = 9.3e-23
Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
          MR +PMEFFAE+EEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD
Sbjct: 1  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60

Query: 61 VN 63
          +N
Sbjct: 61 IN 62

[Close]

BLAST of MELO3C023070 vs. ExPASy Swiss-Prot
Match: Q9T0H2 (Small acidic protein 1 OS=Arabidopsis thaliana OX=3702 GN=SMAP1 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.4e-13
Identity = 34/62 (54.84%), Postives = 51/62 (82.26%), Query Frame = 0


Query: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
          MR   ++  +E+++ GS++AMDVDD++ +EIL EG + ++NKLADADFFN F+DDFDD+D
Sbjct: 1  MRPMQLDMLSEMDDAGSSMAMDVDDLEAMEILNEGGLVSDNKLADADFFNKFDDDFDDTD 60

Query: 61 VN 63
          +N
Sbjct: 61 IN 62

[Close]

BLAST of MELO3C023070 vs. ExPASy Swiss-Prot
Match: Q1ECS0 (Small acidic protein 2 OS=Arabidopsis thaliana OX=3702 GN=SMAP2 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 2.0e-04
Identity = 27/62 (43.55%), Postives = 38/62 (61.29%), Query Frame = 0


Query: 7  EFFAELEEQGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNSFEDDFDDSD 63
          +F  E+E  G ++ M    D DD  P+++  E  G+   + K  D+DFFN FEDDFDDSD
Sbjct: 17 DFLGEMEYPGYSMPMQMEIDEDDFGPMDMQFEVGGISPFQMKPEDSDFFNKFEDDFDDSD 76

[Close]

BLAST of MELO3C023070 vs. ExPASy TrEMBL
Match: A0A5A7SMJ5 (Small acidic protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00640 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.4e-24
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
          MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD
Sbjct: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60

Query: 61 VN 63
          VN
Sbjct: 61 VN 62

[Close]

BLAST of MELO3C023070 vs. ExPASy TrEMBL
Match: A0A1S3CCM1 (small acidic protein 1 OS=Cucumis melo OX=3656 GN=LOC103499479 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.4e-24
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
          MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD
Sbjct: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60

Query: 61 VN 63
          VN
Sbjct: 61 VN 62

[Close]

BLAST of MELO3C023070 vs. ExPASy TrEMBL
Match: A0A0A0LNK1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G166190 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.1e-24
Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
          MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD
Sbjct: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60

Query: 61 VN 63
          +N
Sbjct: 61 IN 62

[Close]

BLAST of MELO3C023070 vs. ExPASy TrEMBL
Match: A0A6J1KE12 (small acidic protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111494814 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.5e-23
Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
          MR +PMEFFAE+EEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD
Sbjct: 1  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60

Query: 61 VN 63
          +N
Sbjct: 61 IN 62

[Close]

BLAST of MELO3C023070 vs. ExPASy TrEMBL
Match: A0A6J1HIH2 (small acidic protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111464345 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.5e-23
Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
          MR +PMEFFAE+EEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD
Sbjct: 1  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60

Query: 61 VN 63
          +N
Sbjct: 61 IN 62

[Close]

BLAST of MELO3C023070 vs. TAIR 10
Match: AT4G13520.1 (small acidic protein 1 )

HSP 1 Score: 76.3 bits (186), Expect = 1.0e-14
Identity = 34/62 (54.84%), Postives = 51/62 (82.26%), Query Frame = 0


Query: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
          MR   ++  +E+++ GS++AMDVDD++ +EIL EG + ++NKLADADFFN F+DDFDD+D
Sbjct: 1  MRPMQLDMLSEMDDAGSSMAMDVDDLEAMEILNEGGLVSDNKLADADFFNKFDDDFDDTD 60

Query: 61 VN 63
          +N
Sbjct: 61 IN 62

[Close]

BLAST of MELO3C023070 vs. TAIR 10
Match: AT3G24280.1 (small acidic protein 2 )

HSP 1 Score: 45.8 bits (107), Expect = 1.4e-05
Identity = 27/62 (43.55%), Postives = 38/62 (61.29%), Query Frame = 0


Query: 7  EFFAELEEQGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNSFEDDFDDSD 63
          +F  E+E  G ++ M    D DD  P+++  E  G+   + K  D+DFFN FEDDFDDSD
Sbjct: 17 DFLGEMEYPGYSMPMQMEIDEDDFGPMDMQFEVGGISPFQMKPEDSDFFNKFEDDFDDSD 76

The following BLAST results are available for this feature:

BLAST of MELO3C023070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460713.1	4.9e-24	100.00	PREDICTED: small acidic protein 1 [Cucumis melo] >KAA0031980.1 small acidic prot...	[more]
XP_004147176.1	6.5e-24	98.39	small acidic protein 1 [Cucumis sativus] >KGN61541.1 hypothetical protein Csa_02...	[more]
XP_038875245.1	5.5e-23	95.16	small acidic protein 1 [Benincasa hispida]	[more]
KAG6593800.1	9.3e-23	93.55	Small acidic protein 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022964281.1	9.3e-23	93.55	small acidic protein 1 [Cucurbita moschata] >XP_022964282.1 small acidic protein...	[more]

BLAST of MELO3C023070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9T0H2	1.4e-13	54.84	Small acidic protein 1 OS=Arabidopsis thaliana OX=3702 GN=SMAP1 PE=1 SV=1	[more]
Q1ECS0	2.0e-04	43.55	Small acidic protein 2 OS=Arabidopsis thaliana OX=3702 GN=SMAP2 PE=2 SV=1	[more]

BLAST of MELO3C023070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SMJ5	2.4e-24	100.00	Small acidic protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold9...	[more]
A0A1S3CCM1	2.4e-24	100.00	small acidic protein 1 OS=Cucumis melo OX=3656 GN=LOC103499479 PE=4 SV=1	[more]
A0A0A0LNK1	3.1e-24	98.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G166190 PE=4 SV=1	[more]
A0A6J1KE12	4.5e-23	93.55	small acidic protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111494814 PE=4 SV=1	[more]
A0A6J1HIH2	4.5e-23	93.55	small acidic protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111464345 PE=4 SV=1	[more]

BLAST of MELO3C023070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G13520.1	1.0e-14	54.84	small acidic protein 1	[more]
AT3G24280.1	1.4e-05	43.55	small acidic protein 2	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C023070.1	MELO3C023070.1	mRNA