MELO3C022915.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C022915.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionTPRXL protein
Locationchr10: 27393760 .. 27393999 (+)
RNA-Seq ExpressionMELO3C022915.jh1
SyntenyMELO3C022915.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACATTCCACCACATGGAAGCAAATGAAGAAAGTATTAAGAACAAAGAGAAAGTGAAGAGCTTACTTATTCTACTGCAGGCAGCACATGACGAAAGAGATGAAGCAAGAGATCAACTGCAGAAGGAAACAATGTGTGCTGAGGAGTATTGGAACCAACATGAAAAATGGTGGTCGTTGTCAAGTTACTATGATATTGTAAAAGGAGAAGGAAACAATATCAATCATACTATGTACTAG

mRNA sequence

ATGACATTCCACCACATGGAAGCAAATGAAGAAAGTATTAAGAACAAAGAGAAAGTGAAGAGCTTACTTATTCTACTGCAGGCAGCACATGACGAAAGAGATGAAGCAAGAGATCAACTGCAGAAGGAAACAATGTGTGCTGAGGAGTATTGGAACCAACATGAAAAATGGTGGTCGTTGTCAAGTTACTATGATATTGTAAAAGGAGAAGGAAACAATATCAATCATACTATGTACTAG

Coding sequence (CDS)

ATGACATTCCACCACATGGAAGCAAATGAAGAAAGTATTAAGAACAAAGAGAAAGTGAAGAGCTTACTTATTCTACTGCAGGCAGCACATGACGAAAGAGATGAAGCAAGAGATCAACTGCAGAAGGAAACAATGTGTGCTGAGGAGTATTGGAACCAACATGAAAAATGGTGGTCGTTGTCAAGTTACTATGATATTGTAAAAGGAGAAGGAAACAATATCAATCATACTATGTACTAG

Protein sequence

MTFHHMEANEESIKNKEKVKSLLILLQAAHDERDEARDQLQKETMCAEEYWNQHEKWWSLSSYYDIVKGEGNNINHTMY
Homology
BLAST of MELO3C022915.jh1 vs. NCBI nr
Match: KAA0054205.1 (TPRXL protein [Cucumis melo var. makuwa] >TYK15058.1 TPRXL protein [Cucumis melo var. makuwa])

HSP 1 Score: 162 bits (409), Expect = 8.61e-50
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0

Query: 1  MTFHHMEANEESIKNKEKVKSLLILLQAAHDERDEARDQLQKETMCAEEYWNQHEKWWSL 60
          MTFHHMEANEESIKNKEKVKSLLILLQAAHDERDEARDQLQKETMCAEEYWNQHEKWWSL
Sbjct: 1  MTFHHMEANEESIKNKEKVKSLLILLQAAHDERDEARDQLQKETMCAEEYWNQHEKWWSL 60

Query: 61 SSYYDIVKGEGNNINHTM 78
          SSYYDIVKGEGNNINHTM
Sbjct: 61 SSYYDIVKGEGNNINHTM 78

BLAST of MELO3C022915.jh1 vs. NCBI nr
Match: XP_023007333.1 (uncharacterized protein LOC111499860 isoform X2 [Cucurbita maxima])

HSP 1 Score: 65.9 bits (159), Expect = 1.80e-10
Identity = 34/37 (91.89%), Postives = 37/37 (100.00%), Query Frame = 0

Query: 6  MEANEESIKNKEKVKSLLILLQAAHDERDEARDQLQK 42
          MEANEESIKNKEKVKSLL+LLQAA++ERDEARDQLQK
Sbjct: 12 MEANEESIKNKEKVKSLLLLLQAAYEERDEARDQLQK 48

BLAST of MELO3C022915.jh1 vs. NCBI nr
Match: KAG7010574.1 (hypothetical protein SDJN02_27368 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 65.9 bits (159), Expect = 1.93e-10
Identity = 34/37 (91.89%), Postives = 37/37 (100.00%), Query Frame = 0

Query: 6  MEANEESIKNKEKVKSLLILLQAAHDERDEARDQLQK 42
          MEANEESIKNKEKVKSLL+LLQAA++ERDEARDQLQK
Sbjct: 33 MEANEESIKNKEKVKSLLLLLQAAYEERDEARDQLQK 69

BLAST of MELO3C022915.jh1 vs. NCBI nr
Match: KAG6570730.1 (hypothetical protein SDJN03_29645, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 65.9 bits (159), Expect = 1.93e-10
Identity = 34/37 (91.89%), Postives = 37/37 (100.00%), Query Frame = 0

Query: 6  MEANEESIKNKEKVKSLLILLQAAHDERDEARDQLQK 42
          MEANEESIKNKEKVKSLL+LLQAA++ERDEARDQLQK
Sbjct: 33 MEANEESIKNKEKVKSLLLLLQAAYEERDEARDQLQK 69

BLAST of MELO3C022915.jh1 vs. NCBI nr
Match: XP_022986908.1 (uncharacterized protein LOC111484506 [Cucurbita maxima])

HSP 1 Score: 65.9 bits (159), Expect = 2.08e-10
Identity = 34/37 (91.89%), Postives = 37/37 (100.00%), Query Frame = 0

Query: 6  MEANEESIKNKEKVKSLLILLQAAHDERDEARDQLQK 42
          MEANEESIKNKEKVKSLL+LLQAA++ERDEARDQLQK
Sbjct: 47 MEANEESIKNKEKVKSLLLLLQAAYEERDEARDQLQK 83

BLAST of MELO3C022915.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UKK3 (TPRXL protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G001080 PE=4 SV=1)

HSP 1 Score: 162 bits (409), Expect = 4.17e-50
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0

Query: 1  MTFHHMEANEESIKNKEKVKSLLILLQAAHDERDEARDQLQKETMCAEEYWNQHEKWWSL 60
          MTFHHMEANEESIKNKEKVKSLLILLQAAHDERDEARDQLQKETMCAEEYWNQHEKWWSL
Sbjct: 1  MTFHHMEANEESIKNKEKVKSLLILLQAAHDERDEARDQLQKETMCAEEYWNQHEKWWSL 60

Query: 61 SSYYDIVKGEGNNINHTM 78
          SSYYDIVKGEGNNINHTM
Sbjct: 61 SSYYDIVKGEGNNINHTM 78

BLAST of MELO3C022915.jh1 vs. ExPASy TrEMBL
Match: A0A6J1L7E2 (uncharacterized protein LOC111499860 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499860 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 8.70e-11
Identity = 34/37 (91.89%), Postives = 37/37 (100.00%), Query Frame = 0

Query: 6  MEANEESIKNKEKVKSLLILLQAAHDERDEARDQLQK 42
          MEANEESIKNKEKVKSLL+LLQAA++ERDEARDQLQK
Sbjct: 12 MEANEESIKNKEKVKSLLLLLQAAYEERDEARDQLQK 48

BLAST of MELO3C022915.jh1 vs. ExPASy TrEMBL
Match: A0A6J1JHW9 (uncharacterized protein LOC111484506 OS=Cucurbita maxima OX=3661 GN=LOC111484506 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.01e-10
Identity = 34/37 (91.89%), Postives = 37/37 (100.00%), Query Frame = 0

Query: 6  MEANEESIKNKEKVKSLLILLQAAHDERDEARDQLQK 42
          MEANEESIKNKEKVKSLL+LLQAA++ERDEARDQLQK
Sbjct: 47 MEANEESIKNKEKVKSLLLLLQAAYEERDEARDQLQK 83

BLAST of MELO3C022915.jh1 vs. ExPASy TrEMBL
Match: A0A6J1FYD6 (uncharacterized protein LOC111448511 OS=Cucurbita moschata OX=3662 GN=LOC111448511 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.01e-10
Identity = 34/37 (91.89%), Postives = 37/37 (100.00%), Query Frame = 0

Query: 6  MEANEESIKNKEKVKSLLILLQAAHDERDEARDQLQK 42
          MEANEESIKNKEKVKSLL+LLQAA++ERDEARDQLQK
Sbjct: 47 MEANEESIKNKEKVKSLLLLLQAAYEERDEARDQLQK 83

BLAST of MELO3C022915.jh1 vs. ExPASy TrEMBL
Match: A0A6J1KYE1 (uncharacterized protein LOC111499860 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499860 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.12e-10
Identity = 34/37 (91.89%), Postives = 37/37 (100.00%), Query Frame = 0

Query: 6  MEANEESIKNKEKVKSLLILLQAAHDERDEARDQLQK 42
          MEANEESIKNKEKVKSLL+LLQAA++ERDEARDQLQK
Sbjct: 61 MEANEESIKNKEKVKSLLLLLQAAYEERDEARDQLQK 97

BLAST of MELO3C022915.jh1 vs. TAIR 10
Match: AT2G28690.1 (Protein of unknown function (DUF1635) )

HSP 1 Score: 42.4 bits (98), Expect = 2.0e-04
Identity = 22/36 (61.11%), Postives = 30/36 (83.33%), Query Frame = 0

Query: 7  EANEESIKNKEKVKSLLILLQAAHDERDEARDQLQK 43
          +ANEE+  ++E+VK+LL LL+ A  ERDEA+DQLQK
Sbjct: 34 KANEETKLHQEEVKNLLHLLKLARQERDEAKDQLQK 69

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0054205.18.61e-50100.00TPRXL protein [Cucumis melo var. makuwa] >TYK15058.1 TPRXL protein [Cucumis melo... [more]
XP_023007333.11.80e-1091.89uncharacterized protein LOC111499860 isoform X2 [Cucurbita maxima][more]
KAG7010574.11.93e-1091.89hypothetical protein SDJN02_27368 [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6570730.11.93e-1091.89hypothetical protein SDJN03_29645, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022986908.12.08e-1091.89uncharacterized protein LOC111484506 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UKK34.17e-50100.00TPRXL protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G001080 ... [more]
A0A6J1L7E28.70e-1191.89uncharacterized protein LOC111499860 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1JHW91.01e-1091.89uncharacterized protein LOC111484506 OS=Cucurbita maxima OX=3661 GN=LOC111484506... [more]
A0A6J1FYD61.01e-1091.89uncharacterized protein LOC111448511 OS=Cucurbita moschata OX=3662 GN=LOC1114485... [more]
A0A6J1KYE11.12e-1091.89uncharacterized protein LOC111499860 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
Match NameE-valueIdentityDescription
AT2G28690.12.0e-0461.11Protein of unknown function (DUF1635) [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 19..39
IPR012862Protein of unknown function DUF1635PFAMPF07795DUF1635coord: 5..61
e-value: 2.8E-7
score: 30.7

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C022915.jh1.t1MELO3C022915.jh1.t1mRNA