MELO3C022678 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTAAAAACACGTGCTTTTAATTTCCAATATATAATTTTCAAAAGACAATCCCAACAAAACACATCAAACTAAATTAAATTAAATTAAATTAAAAACAAGAAAATGCTAGGAAGGTAGCTCTTCTTTATATTCTTCTTCTCATCTCCAAAATTACAATCATCTAATCAAATTTGGAACACCCAAAGAGTTTTTCAGATCTCCAAATTCAAGTTAGACTTCGAAATTCCCATACCTTTTTTTTCTTTTTAATTTCAATTCCATCATGTCTACTACCTCCGACAACGCCGGCGCCGCACGGAGGTCTGGCAAGGTCCCGGAGAAGTCCAGTTTTGCTCAGACTTGTAATCTGTTGAGTCAATACTTGAAGGAGAAGAGAAGCCTTGCAATTACTCCAAGGATTGAACCAAAAGGTACTTTACTTTTCTGGAATTTGAAATTTCTTAACTAATTCAACCTTTTGTTTCTTTTTTTTCTTTTTTTTTTTTTTTCTATTTTACCTGATTTTGTTCTTCTTTTCACGGTTGTGATTCAGATGAGTTTCCGACGACTCGACCACCGGTGGTAATGAATTTTTTGACGAACATGGAAATCCCAGATGAGAAATCTGCCTCTGTGGCGGCGGCGGACTCTATTCCACCAGCTGCAGAGCCGCCCTCTGCCACACAGATGACCATTTTTTATGACGGAAAAGTGTTGGTGTTTAATGATCTACCGTCGGAGAGGGCGGAGGAGATCATGGCCATGGCCGGTAAGGGAATTGCGCCGTCTTCAAGATCTATCGCCACCGCCGTTTCCGACAACGGCGGAGAACAACCTCTGACGAAAGTCTCGAGCGATTTACCCATTGCAAGAAGAGCATCCCTGCATCGATTCTTCGAGAAGAGAAAAGACAGGTAATTAGAATGAAACCTATTTGAATTAGTTAAAATGATTGAATCCCCTATTTGTTTGATGAGGTTCTTATGATTCTTGGTTTGTTCAGAGTTGCAGCAAGAGGTCCATACCAAGTGAATTTACAAGCTTCTTCTAAACCGAGTGGAGAAAGCTACAGATTGAAGAAGGGAAACGAGCAATCTTCGAAGCAGTTTGATTTAAATTTATAGGAAAGATTAATTATATGATAGTTAAGATTATTGTTGTAAAATTCTGACATTACAATTATGGATGGGCTCGATCCACGGCGAGTGTAATCGACTTTGTTCTTCTGATGGTGGAAGCGGATCCCTAAACAAATGAACAGATGGCGACTTCTTCTTTACTTTTCAAGGAACACACACACACATATATATATATATTGGTTGTTGTGAAACTGGAAACTTGAGACTAATGTGTATCCATCTTACTCTATCACGTCTCTCAATTTTCTTATGCTCCAACCATAAATATCTTAGGTTCAACCTTATATGGATTCTGATTCAAAGCTGTGGTTCTTTTTCTTTTTCTTTTTCTTTTTAA TTTTTAAAAACACGTGCTTTTAATTTCCAATATATAATTTTCAAAAGACAATCCCAACAAAACACATCAAACTAAATTAAATTAAATTAAATTAAAAACAAGAAAATGCTAGGAAGGTAGCTCTTCTTTATATTCTTCTTCTCATCTCCAAAATTACAATCATCTAATCAAATTTGGAACACCCAAAGAGTTTTTCAGATCTCCAAATTCAAGTTAGACTTCGAAATTCCCATACCTTTTTTTTCTTTTTAATTTCAATTCCATCATGTCTACTACCTCCGACAACGCCGGCGCCGCACGGAGGTCTGGCAAGGTCCCGGAGAAGTCCAGTTTTGCTCAGACTTGTAATCTGTTGAGTCAATACTTGAAGGAGAAGAGAAGCCTTGCAATTACTCCAAGGATTGAACCAAAAGGTACTTTACTTTTCTGGAATTTGAAATTTCTTAACTAATTCAACCTTTTGTTTCTTTTTTTTCTTTTTTTTTTTTTTTCTATTTTACCTGATTTTGTTCTTCTTTTCACGGTTGTGATTCAGATGAGTTTCCGACGACTCGACCACCGGTGGTAATGAATTTTTTGACGAACATGGAAATCCCAGATGAGAAATCTGCCTCTGTGGCGGCGGCGGACTCTATTCCACCAGCTGCAGAGCCGCCCTCTGCCACACAGATGACCATTTTTTATGACGGAAAAGTGTTGGTGTTTAATGATCTACCGTCGGAGAGGGCGGAGGAGATCATGGCCATGGCCGGTAAGGGAATTGCGCCGTCTTCAAGATCTATCGCCACCGCCGTTTCCGACAACGGCGGAGAACAACCTCTGACGAAAGTCTCGAGCGATTTACCCATTGCAAGAAGAGCATCCCTGCATCGATTCTTCGAGAAGAGAAAAGACAGAGTTGCAGCAAGAGGTCCATACCAAGTGAATTTACAAGCTTCTTCTAAACCGAGTGGAGAAAGCTACAGATTGAAGAAGGGAAACGAGCAATCTTCGAAGCAGTTTGATTTAAATTTATAGGAAAGATTAATTATATGATAGTTAAGATTATTGTTGTAAAATTCTGACATTACAATTATGGATGGGCTCGATCCACGGCGAGTGTAATCGACTTTGTTCTTCTGATGGTGGAAGCGGATCCCTAAACAAATGAACAGATGGCGACTTCTTCTTTACTTTTCAAGGAACACACACACACATATATATATATATTGGTTGTTGTGAAACTGGAAACTTGAGACTAATGTGTATCCATCTTACTCTATCACGTCTCTCAATTTTCTTATGCTCCAACCATAAATATCTTAGGTTCAACCTTATATGGATTCTGATTCAAAGCTGTGGTTCTTTTTCTTTTTCTTTTTCTTTTTAA ATGAATTTTTTGACGAACATGGAAATCCCAGATGAGAAATCTGCCTCTGTGGCGGCGGCGGACTCTATTCCACCAGCTGCAGAGCCGCCCTCTGCCACACAGATGACCATTTTTTATGACGGAAAAGTGTTGGTGTTTAATGATCTACCGTCGGAGAGGGCGGAGGAGATCATGGCCATGGCCGGTAAGGGAATTGCGCCGTCTTCAAGATCTATCGCCACCGCCGTTTCCGACAACGGCGGAGAACAACCTCTGACGAAAGTCTCGAGCGATTTACCCATTGCAAGAAGAGCATCCCTGCATCGATTCTTCGAGAAGAGAAAAGACAGAGTTGCAGCAAGAGGTCCATACCAAGTGAATTTACAAGCTTCTTCTAAACCGAGTGGAGAAAGCTACAGATTGAAGAAGGGAAACGAGCAATCTTCGAAGCAGTTTGATTTAAATTTATAG MNFLTNMEIPDEKSASVAAADSIPPAAEPPSATQMTIFYDGKVLVFNDLPSERAEEIMAMAGKGIAPSSRSIATAVSDNGGEQPLTKVSSDLPIARRASLHRFFEKRKDRVAARGPYQVNLQASSKPSGESYRLKKGNEQSSKQFDLNL Homology
BLAST of MELO3C022678 vs. NCBI nr
Match: XP_008460319.1 (PREDICTED: protein TIFY 10c-like [Cucumis melo] >KAA0053514.1 protein TIFY 10c-like [Cucumis melo var. makuwa] >TYK19107.1 protein TIFY 10c-like [Cucumis melo var. makuwa]) HSP 1 Score: 285.0 bits (728), Expect = 3.6e-73 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of MELO3C022678 vs. NCBI nr
Match: XP_004144433.1 (protein TIFY 10a [Cucumis sativus] >KGN58456.1 hypothetical protein Csa_002378 [Cucumis sativus]) HSP 1 Score: 273.1 bits (697), Expect = 1.4e-69 Identity = 143/149 (95.97%), Postives = 143/149 (95.97%), Query Frame = 0
BLAST of MELO3C022678 vs. NCBI nr
Match: XP_022980722.1 (protein TIFY 10b-like [Cucurbita maxima]) HSP 1 Score: 189.5 bits (480), Expect = 2.1e-44 Identity = 112/162 (69.14%), Postives = 116/162 (71.60%), Query Frame = 0
BLAST of MELO3C022678 vs. NCBI nr
Match: XP_038881485.1 (protein TIFY 10a-like [Benincasa hispida] >XP_038881534.1 protein TIFY 10a-like [Benincasa hispida]) HSP 1 Score: 186.0 bits (471), Expect = 2.3e-43 Identity = 111/150 (74.00%), Postives = 117/150 (78.00%), Query Frame = 0
BLAST of MELO3C022678 vs. NCBI nr
Match: XP_022955789.1 (protein TIFY 10b-like [Cucurbita moschata]) HSP 1 Score: 181.8 bits (460), Expect = 4.3e-42 Identity = 110/162 (67.90%), Postives = 114/162 (70.37%), Query Frame = 0
BLAST of MELO3C022678 vs. ExPASy Swiss-Prot
Match: Q8H395 (Protein TIFY 10b OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY10B PE=1 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 4.3e-16 Identity = 54/125 (43.20%), Postives = 73/125 (58.40%), Query Frame = 0
BLAST of MELO3C022678 vs. ExPASy Swiss-Prot
Match: A2YNP2 (Protein TIFY 10b OS=Oryza sativa subsp. indica OX=39946 GN=TIFY10B PE=3 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 7.3e-16 Identity = 54/125 (43.20%), Postives = 72/125 (57.60%), Query Frame = 0
BLAST of MELO3C022678 vs. ExPASy Swiss-Prot
Match: Q84R94 (Protein TIFY 10a OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY10A PE=1 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 6.1e-15 Identity = 52/127 (40.94%), Postives = 69/127 (54.33%), Query Frame = 0
BLAST of MELO3C022678 vs. ExPASy Swiss-Prot
Match: Q9S7M2 (Protein TIFY 10B OS=Arabidopsis thaliana OX=3702 GN=TIFY10B PE=1 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.4e-14 Identity = 48/139 (34.53%), Postives = 79/139 (56.83%), Query Frame = 0
BLAST of MELO3C022678 vs. ExPASy Swiss-Prot
Match: Q9LDU5 (Protein TIFY 11A OS=Arabidopsis thaliana OX=3702 GN=TIFY11A PE=1 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 3.0e-14 Identity = 47/118 (39.83%), Postives = 63/118 (53.39%), Query Frame = 0
BLAST of MELO3C022678 vs. ExPASy TrEMBL
Match: A0A5A7UE71 (Protein TIFY 10c-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold522G00250 PE=3 SV=1) HSP 1 Score: 285.0 bits (728), Expect = 1.8e-73 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of MELO3C022678 vs. ExPASy TrEMBL
Match: A0A1S3CCP0 (protein TIFY 10c-like OS=Cucumis melo OX=3656 GN=LOC103499178 PE=3 SV=1) HSP 1 Score: 285.0 bits (728), Expect = 1.8e-73 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of MELO3C022678 vs. ExPASy TrEMBL
Match: A0A0A0LEE6 (Tify domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G645940 PE=3 SV=1) HSP 1 Score: 273.1 bits (697), Expect = 6.9e-70 Identity = 143/149 (95.97%), Postives = 143/149 (95.97%), Query Frame = 0
BLAST of MELO3C022678 vs. ExPASy TrEMBL
Match: A0A6J1IS28 (protein TIFY 10b-like OS=Cucurbita maxima OX=3661 GN=LOC111480006 PE=3 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 1.0e-44 Identity = 112/162 (69.14%), Postives = 116/162 (71.60%), Query Frame = 0
BLAST of MELO3C022678 vs. ExPASy TrEMBL
Match: A0A6J1GXA0 (protein TIFY 10b-like OS=Cucurbita moschata OX=3662 GN=LOC111457672 PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.1e-42 Identity = 110/162 (67.90%), Postives = 114/162 (70.37%), Query Frame = 0
BLAST of MELO3C022678 vs. TAIR 10
Match: AT1G74950.1 (TIFY domain/Divergent CCT motif family protein ) HSP 1 Score: 80.9 bits (198), Expect = 9.7e-16 Identity = 48/139 (34.53%), Postives = 79/139 (56.83%), Query Frame = 0
BLAST of MELO3C022678 vs. TAIR 10
Match: AT1G17380.1 (jasmonate-zim-domain protein 5 ) HSP 1 Score: 79.7 bits (195), Expect = 2.2e-15 Identity = 47/118 (39.83%), Postives = 63/118 (53.39%), Query Frame = 0
BLAST of MELO3C022678 vs. TAIR 10
Match: AT1G19180.1 (jasmonate-zim-domain protein 1 ) HSP 1 Score: 77.8 bits (190), Expect = 8.2e-15 Identity = 52/126 (41.27%), Postives = 68/126 (53.97%), Query Frame = 0
BLAST of MELO3C022678 vs. TAIR 10
Match: AT1G19180.2 (jasmonate-zim-domain protein 1 ) HSP 1 Score: 77.8 bits (190), Expect = 8.2e-15 Identity = 52/126 (41.27%), Postives = 68/126 (53.97%), Query Frame = 0
BLAST of MELO3C022678 vs. TAIR 10
Match: AT1G72450.1 (jasmonate-zim-domain protein 6 ) HSP 1 Score: 71.6 bits (174), Expect = 5.9e-13 Identity = 49/132 (37.12%), Postives = 64/132 (48.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
|