MELO3C022626.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C022626.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionStress response protein NST1-like
Locationchr07: 16289576 .. 16289743 (+)
RNA-Seq ExpressionMELO3C022626.jh1
SyntenyMELO3C022626.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAAAACCAAGGTGAGGTTGGATATTGTTAATATGTTTTACGCGATGAAATATCATCCGGACGAGTCATATGCAATAGTGGAAGGGGAGAAGTTGCCTTTCACCACGGAGGAGATTAACGAATCATATAACCTTCCAAATGACCCAGATGCTTACCATGGCTAA

mRNA sequence

ATGGGAAAAACCAAGGTGAGGTTGGATATTGTTAATATGTTTTACGCGATGAAATATCATCCGGACGAGTCATATGCAATAGTGGAAGGGGAGAAGTTGCCTTTCACCACGGAGGAGATTAACGAATCATATAACCTTCCAAATGACCCAGATGCTTACCATGGCTAA

Coding sequence (CDS)

ATGGGAAAAACCAAGGTGAGGTTGGATATTGTTAATATGTTTTACGCGATGAAATATCATCCGGACGAGTCATATGCAATAGTGGAAGGGGAGAAGTTGCCTTTCACCACGGAGGAGATTAACGAATCATATAACCTTCCAAATGACCCAGATGCTTACCATGGCTAA

Protein sequence

MGKTKVRLDIVNMFYAMKYHPDESYAIVEGEKLPFTTEEINESYNLPNDPDAYHG
Homology
BLAST of MELO3C022626.jh1 vs. NCBI nr
Match: KAA0040553.1 (hypothetical protein E6C27_scaffold262G001150 [Cucumis melo var. makuwa] >TYK05596.1 hypothetical protein E5676_scaffold98G00460 [Cucumis melo var. makuwa])

HSP 1 Score: 83.2 bits (204), Expect = 1.79e-18
Identity = 36/55 (65.45%), Postives = 45/55 (81.82%), Query Frame = 0

Query: 1   MGKTKVRLDIVNMFYAMKYHPDESYAIVEGEKLPFTTEEINESYNLPNDPDAYHG 55
           + +  VRLDIV+MFY +KYHPDESYAI+EGEK+P   EEIN+ Y+LPNDP+ Y G
Sbjct: 57  LRENSVRLDIVDMFYVVKYHPDESYAILEGEKVPLIVEEINDLYDLPNDPNVYPG 111

BLAST of MELO3C022626.jh1 vs. NCBI nr
Match: KAE8645907.1 (hypothetical protein Csa_023734, partial [Cucumis sativus])

HSP 1 Score: 80.5 bits (197), Expect = 4.36e-18
Identity = 33/55 (60.00%), Postives = 45/55 (81.82%), Query Frame = 0

Query: 1  MGKTKVRLDIVNMFYAMKYHPDESYAIVEGEKLPFTTEEINESYNLPNDPDAYHG 55
          + +T++RLD+V+MFYA K+HP ESY +V+GEK+PF  E INE Y+ PNDP+AY G
Sbjct: 36 VSETQIRLDLVDMFYAAKFHPQESYVVVKGEKVPFIVESINELYDFPNDPNAYLG 90

BLAST of MELO3C022626.jh1 vs. NCBI nr
Match: TYK25768.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 73.6 bits (179), Expect = 1.97e-13
Identity = 34/50 (68.00%), Postives = 41/50 (82.00%), Query Frame = 0

Query: 3   KTKVRLDIVNMFYAMKYHPDESYAIVEGEKLPFTTEEINESYNLPNDPDA 52
           +TKV+LDIV+MFY  K+H +ESY IVEGEK+ FT EEINE Y+LPND D 
Sbjct: 263 ETKVKLDIVDMFYVAKFHLNESYMIVEGEKVSFTVEEINELYDLPNDRDT 312

BLAST of MELO3C022626.jh1 vs. NCBI nr
Match: KAA0038829.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 73.6 bits (179), Expect = 1.99e-13
Identity = 34/50 (68.00%), Postives = 41/50 (82.00%), Query Frame = 0

Query: 3   KTKVRLDIVNMFYAMKYHPDESYAIVEGEKLPFTTEEINESYNLPNDPDA 52
           +TKV+LDIV+MFY  K+H +ESY IVEGEK+ FT EEINE Y+LPND D 
Sbjct: 294 ETKVKLDIVDMFYVAKFHLNESYMIVEGEKVSFTVEEINELYDLPNDRDT 343

BLAST of MELO3C022626.jh1 vs. NCBI nr
Match: KAA0056424.1 (hypothetical protein E6C27_scaffold186G001800 [Cucumis melo var. makuwa])

HSP 1 Score: 64.7 bits (156), Expect = 1.12e-11
Identity = 28/54 (51.85%), Postives = 38/54 (70.37%), Query Frame = 0

Query: 2  GKTKVRLDIVNMFYAMKYHPDESYAIVEGEKLPFTTEEINESYNLPNDPDAYHG 55
          G TKVRL +V+MFY  K+HP + YA+V+GE++ F  E INE Y  PN+ + Y G
Sbjct: 33 GDTKVRLYVVDMFYRTKFHPTDLYAMVDGERISFRAEVINELYGFPNEAELYIG 86

BLAST of MELO3C022626.jh1 vs. ExPASy TrEMBL
Match: A0A5D3C5D1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00460 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 8.67e-19
Identity = 36/55 (65.45%), Postives = 45/55 (81.82%), Query Frame = 0

Query: 1   MGKTKVRLDIVNMFYAMKYHPDESYAIVEGEKLPFTTEEINESYNLPNDPDAYHG 55
           + +  VRLDIV+MFY +KYHPDESYAI+EGEK+P   EEIN+ Y+LPNDP+ Y G
Sbjct: 57  LRENSVRLDIVDMFYVVKYHPDESYAILEGEKVPLIVEEINDLYDLPNDPNVYPG 111

BLAST of MELO3C022626.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DQE7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00740 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 9.53e-14
Identity = 34/50 (68.00%), Postives = 41/50 (82.00%), Query Frame = 0

Query: 3   KTKVRLDIVNMFYAMKYHPDESYAIVEGEKLPFTTEEINESYNLPNDPDA 52
           +TKV+LDIV+MFY  K+H +ESY IVEGEK+ FT EEINE Y+LPND D 
Sbjct: 263 ETKVKLDIVDMFYVAKFHLNESYMIVEGEKVSFTVEEINELYDLPNDRDT 312

BLAST of MELO3C022626.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TBU7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold279G00120 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 9.62e-14
Identity = 34/50 (68.00%), Postives = 41/50 (82.00%), Query Frame = 0

Query: 3   KTKVRLDIVNMFYAMKYHPDESYAIVEGEKLPFTTEEINESYNLPNDPDA 52
           +TKV+LDIV+MFY  K+H +ESY IVEGEK+ FT EEINE Y+LPND D 
Sbjct: 294 ETKVKLDIVDMFYVAKFHLNESYMIVEGEKVSFTVEEINELYDLPNDRDT 343

BLAST of MELO3C022626.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UMK2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G001800 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 5.41e-12
Identity = 28/54 (51.85%), Postives = 38/54 (70.37%), Query Frame = 0

Query: 2  GKTKVRLDIVNMFYAMKYHPDESYAIVEGEKLPFTTEEINESYNLPNDPDAYHG 55
          G TKVRL +V+MFY  K+HP + YA+V+GE++ F  E INE Y  PN+ + Y G
Sbjct: 33 GDTKVRLYVVDMFYRTKFHPTDLYAMVDGERISFRAEVINELYGFPNEAELYIG 86

BLAST of MELO3C022626.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BW95 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold784G00200 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.37e-11
Identity = 27/53 (50.94%), Postives = 37/53 (69.81%), Query Frame = 0

Query: 2  GKTKVRLDIVNMFYAMKYHPDESYAIVEGEKLPFTTEEINESYNLPNDPDAYH 54
          G+ KV+ D+V MF+  KYHP + Y  +E E++PF+TE INE Y LPN+  A H
Sbjct: 39 GEIKVQPDVVGMFFEAKYHPKDLYTTMERERVPFSTEAINELYRLPNEVPATH 91

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0040553.11.79e-1865.45hypothetical protein E6C27_scaffold262G001150 [Cucumis melo var. makuwa] >TYK055... [more]
KAE8645907.14.36e-1860.00hypothetical protein Csa_023734, partial [Cucumis sativus][more]
TYK25768.11.97e-1368.00stress response protein NST1-like [Cucumis melo var. makuwa][more]
KAA0038829.11.99e-1368.00stress response protein NST1-like [Cucumis melo var. makuwa][more]
KAA0056424.11.12e-1151.85hypothetical protein E6C27_scaffold186G001800 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3C5D18.67e-1965.45Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DQE79.53e-1468.00Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7TBU79.62e-1468.00Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7UMK25.41e-1251.85Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BW952.37e-1150.94Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C022626.jh1.t1MELO3C022626.jh1.t1mRNA