MELO3C022599 (gene) Melon (DHL92) v4

Overview
NameMELO3C022599
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionSerine/threonine-protein phosphatase 7 long form-like protein isoform X1
Locationchr10: 15870075 .. 15870248 (-)
RNA-Seq ExpressionMELO3C022599
SyntenyMELO3C022599
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AATAATTTTGTTGAAGACGTACACAATTTAGAAGCTTTGAGCGACATATGTGACACAACCGCAAATGACCTAGAACAAATTATTCAGCAGACCCGACGACTCAATGTTACCGACATGGATCGTAGACAACGATGGCAAGGCGATGATATTGTAGAGGGTGATGAAGAAAATTGA

mRNA sequence

AATAATTTTGTTGAAGACGTACACAATTTAGAAGCTTTGAGCGACATATGTGACACAACCGCAAATGACCTAGAACAAATTATTCAGCAGACCCGACGACTCAATGTTACCGACATGGATCGTAGACAACGATGGCAAGGCGATGATATTGTAGAGGGTGATGAAGAAAATTGA

Coding sequence (CDS)

AATAATTTTGTTGAAGACGTACACAATTTAGAAGCTTTGAGCGACATATGTGACACAACCGCAAATGACCTAGAACAAATTATTCAGCAGACCCGACGACTCAATGTTACCGACATGGATCGTAGACAACGATGGCAAGGCGATGATATTGTAGAGGGTGATGAAGAAAATTGA

Protein sequence

NNFVEDVHNLEALSDICDTTANDLEQIIQQTRRLNVTDMDRRQRWQGDDIVEGDEEN
Homology
BLAST of MELO3C022599 vs. NCBI nr
Match: KAA0054292.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa] >TYK12329.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 75.9 bits (185), Expect = 1.3e-10
Identity = 43/67 (64.18%), Postives = 48/67 (71.64%), Query Frame = 0

Query: 2   NFVEDV------HNLEALSDICDTTANDLEQIIQQTRRLNVTDMDRR-----QRWQGDDI 58
           NFV D+      HNLEAL D+CDTT  DL QIIQQTR+LNV D DRR     +R QGDD+
Sbjct: 246 NFVADIRAFSVKHNLEALGDMCDTTMEDLTQIIQQTRQLNVVDTDRRRMRPIRRRQGDDV 305

BLAST of MELO3C022599 vs. NCBI nr
Match: TYK25184.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 65.1 bits (157), Expect = 2.3e-07
Identity = 34/60 (56.67%), Postives = 43/60 (71.67%), Query Frame = 0

Query: 2   NFVEDV------HNLEALSDICDTTANDLEQIIQQTRRLNVTDMDRRQRWQGDDIVEGDE 56
           +FV++V      H++EAL  ICD T   ++ IIQQTRRL V D DRR+R QGDD+VEGDE
Sbjct: 479 DFVDEVQTFSVEHDIEALGQICDRTTERVDHIIQQTRRLTVADTDRRRRRQGDDVVEGDE 538

BLAST of MELO3C022599 vs. NCBI nr
Match: KAA0043956.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 61.6 bits (148), Expect = 2.5e-06
Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = 0

Query: 2   NFVEDV------HNLEALSDICDTTANDLEQIIQQTRRLNVTDMD-----RRQRWQGDDI 58
           +FV++V      HN+EAL  ICD T   ++ IIQ+TRRL V D D     RR+R QGDD+
Sbjct: 219 DFVDEVQTFSVEHNIEALGQICDRTTERVDHIIQKTRRLTVADTDRRRMRRRRRRQGDDV 278

BLAST of MELO3C022599 vs. NCBI nr
Match: TYK03303.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa] >TYK12342.1 serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 61.2 bits (147), Expect = 3.3e-06
Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = 0

Query: 2   NFVEDV------HNLEALSDICDTTANDLEQIIQQTRRLNVTDMD-----RRQRWQGDDI 58
           +FV++V      H++EAL  ICD T   ++ IIQQTRRL V D D     RR+R QGDD+
Sbjct: 513 DFVDEVQTFSVEHDIEALGQICDRTTERVDHIIQQTRRLTVADTDRRRMRRRRRRQGDDV 572

BLAST of MELO3C022599 vs. NCBI nr
Match: KAA0042980.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 61.2 bits (147), Expect = 3.3e-06
Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = 0

Query: 2   NFVEDV------HNLEALSDICDTTANDLEQIIQQTRRLNVTDMD-----RRQRWQGDDI 58
           +FV++V      H++EAL  ICD T   ++ IIQQTRRL V D D     RR+R QGDD+
Sbjct: 866 DFVDEVQTFSVEHDIEALGQICDRTTERVDHIIQQTRRLTVADTDRRRMRRRRRRQGDDV 925

BLAST of MELO3C022599 vs. ExPASy TrEMBL
Match: A0A5A7UER8 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001000 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.2e-11
Identity = 43/67 (64.18%), Postives = 48/67 (71.64%), Query Frame = 0

Query: 2   NFVEDV------HNLEALSDICDTTANDLEQIIQQTRRLNVTDMDRR-----QRWQGDDI 58
           NFV D+      HNLEAL D+CDTT  DL QIIQQTR+LNV D DRR     +R QGDD+
Sbjct: 246 NFVADIRAFSVKHNLEALGDMCDTTMEDLTQIIQQTRQLNVVDTDRRRMRPIRRRQGDDV 305

BLAST of MELO3C022599 vs. ExPASy TrEMBL
Match: A0A5D3DNL9 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003100 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-07
Identity = 34/60 (56.67%), Postives = 43/60 (71.67%), Query Frame = 0

Query: 2   NFVEDV------HNLEALSDICDTTANDLEQIIQQTRRLNVTDMDRRQRWQGDDIVEGDE 56
           +FV++V      H++EAL  ICD T   ++ IIQQTRRL V D DRR+R QGDD+VEGDE
Sbjct: 479 DFVDEVQTFSVEHDIEALGQICDRTTERVDHIIQQTRRLTVADTDRRRRRQGDDVVEGDE 538

BLAST of MELO3C022599 vs. ExPASy TrEMBL
Match: A0A5A7TPE7 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G003010 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.2e-06
Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = 0

Query: 2   NFVEDV------HNLEALSDICDTTANDLEQIIQQTRRLNVTDMD-----RRQRWQGDDI 58
           +FV++V      HN+EAL  ICD T   ++ IIQ+TRRL V D D     RR+R QGDD+
Sbjct: 219 DFVDEVQTFSVEHNIEALGQICDRTTERVDHIIQKTRRLTVADTDRRRMRRRRRRQGDDV 278

BLAST of MELO3C022599 vs. ExPASy TrEMBL
Match: A0A5A7TSW1 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00240 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.6e-06
Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = 0

Query: 2   NFVEDV------HNLEALSDICDTTANDLEQIIQQTRRLNVTDMD-----RRQRWQGDDI 58
           +FV++V      H++EAL  ICD T   ++ IIQQTRRL V D D     RR+R QGDD+
Sbjct: 431 DFVDEVQTFSVEHDIEALGQICDRTTERVDHIIQQTRRLTVADTDRRRMRRRRRRQGDDV 490

BLAST of MELO3C022599 vs. ExPASy TrEMBL
Match: A0A5D3BUF5 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G001440 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.6e-06
Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = 0

Query: 2   NFVEDV------HNLEALSDICDTTANDLEQIIQQTRRLNVTDMD-----RRQRWQGDDI 58
           +FV++V      H++EAL  ICD T   ++ IIQQTRRL V D D     RR+R QGDD+
Sbjct: 513 DFVDEVQTFSVEHDIEALGQICDRTTERVDHIIQQTRRLTVADTDRRRMRRRRRRQGDDV 572

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0054292.11.3e-1064.18serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... [more]
TYK25184.12.3e-0756.67serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi... [more]
KAA0043956.12.5e-0652.24serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi... [more]
TYK03303.13.3e-0652.24serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi... [more]
KAA0042980.13.3e-0652.24serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UER86.2e-1164.18Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... [more]
A0A5D3DNL91.1e-0756.67Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu... [more]
A0A5A7TPE71.2e-0652.24Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu... [more]
A0A5A7TSW11.6e-0652.24Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu... [more]
A0A5D3BUF51.6e-0652.24Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C022599.1MELO3C022599.1mRNA