MELO3C022419 (gene) Melon (DHL92) v4

Overview
NameMELO3C022419
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr11: 31100725 .. 31101058 (-)
RNA-Seq ExpressionMELO3C022419
SyntenyMELO3C022419
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCCCCGGGTTCGCTGGGAGAGGTCGAGCGCGAGCGGCACAGTGCTGGAGTGTCGTTTGAAGGCCACCGATCAGTTGAGAACGCGTTGCTGAAGCTTACGATACATGAGTATCTCTAAACTATGAATCGCTAGGATCGAAACGTCCGCCAGAGTTCACTGCTGTAGCTCGAAACAGAAAAATAACAGGGGCCGACTGAGGAGCGGCGTTTCCGGCGTACTGTTCGTCGTTCGTCGATTACAGCAGGTGGATTCAACCCACAGATCTAGTGTCAGGCCGCCGCACGTAGACGTTCGCCGTCGCCGGATAAGATGGCAGTTGAAACCGTAG

mRNA sequence

ATGGAAGCCCCGGGTTCGCTGGGAGAGGTCGAGCGCGAGCGGCACAGTGCTGGAGTGTCGTTTGAAGGCCACCGATCAGTTGAGAACGCGTTGCTGAAGCTTACGATACATGACTCGAAACAGAAAAATAACAGGGGCCGACTGAGGAGCGGCGTTTCCGGCGTACTGTTCGTCGTTCGTCGATTACAGCAGGTGGATTCAACCCACAGATCTAGTGTCAGGCCGCCGCACGTAGACGTTCGCCGTCGCCGGATAAGATGGCAGTTGAAACCGTAG

Coding sequence (CDS)

ATGGAAGCCCCGGGTTCGCTGGGAGAGGTCGAGCGCGAGCGGCACAGTGCTGGAGTGTCGTTTGAAGGCCACCGATCAGTTGAGAACGCGTTGCTGAAGCTTACGATACATGACTCGAAACAGAAAAATAACAGGGGCCGACTGAGGAGCGGCGTTTCCGGCGTACTGTTCGTCGTTCGTCGATTACAGCAGGTGGATTCAACCCACAGATCTAGTGTCAGGCCGCCGCACGTAGACGTTCGCCGTCGCCGGATAAGATGGCAGTTGAAACCGTAG

Protein sequence

MEAPGSLGEVERERHSAGVSFEGHRSVENALLKLTIHDSKQKNNRGRLRSGVSGVLFVVRRLQQVDSTHRSSVRPPHVDVRRRRIRWQLKP
Homology
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BLAST of MELO3C022419 vs. NCBI nr
Match: KGN46350.2 (hypothetical protein Csa_005456 [Cucumis sativus])

HSP 1 Score: 63.2 bits (152), Expect = 1.4e-06
Identity = 31/38 (81.58%), Postives = 33/38 (86.84%), Query Frame = 0 

Query: 1  MEAPGSLGEVERERHSAGVSFEGHRSVENALLKLTIHD 39
          MEA GSLGEVERER  AGVSFEGHRSVE  LLKLTI++
Sbjct: 27 MEAAGSLGEVERERQGAGVSFEGHRSVERTLLKLTIYE 64

The following BLAST results are available for this feature:
BLAST of MELO3C022419 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C022419 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46350.21.4e-0681.58hypothetical protein Csa_005456 [Cucumis sativus][more]
BLAST of MELO3C022419 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C022419 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C022419.1MELO3C022419.1mRNA