MELO3C022353 (gene) Melon (DHL92) v4

Overview
NameMELO3C022353
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionCoiled-coil domain-containing protein SCD2
Locationchr11: 30640378 .. 30644031 (+)
RNA-Seq ExpressionMELO3C022353
SyntenyMELO3C022353
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CGGGAGGGATGTCCTTCAATCATGTTCTATATATGTGGATTCTATATATGTTGATGTACCTTCTTTCTCCTAATATATACAAACCACTTGGTGGTGTTTTTACAAGCTAAATCATAGGAACATAACTCAGCTTACACACACCATCGATTCACTAGTAATCATTGCTGGAATATTTCCTCCGTTTGAAGTGGTGAAATCTGTTCGAGTCTCTTACGACTACATCTGGACCCACCTCCTAGGAGACATCTTTAGCAAACTCAAGGCAGTCTTTATATGCTCTGAGGGTCTTGAAAGCCAGGATGGGAGCTTTTCATGGGAGCTCACACGCAATGGCAAGTCTCTCACTATTAACCACAAGTCGTTCTTTTCTACCTGGACAACCACATGCCTAATCCTCTTCTGTTAGAAGTGCAGTTTCCGCATACTTACCTTCGATTTTTAACTCCAGTTTTGAGTATATCTGTTCTGTTTGAGGATGGTGTCGATCGCCTACTATGAACCGGTGCGTCAAGCTCTCAAACAGCAATCCAACTGCAGCTGAGTTCCTTCTTCAAGTTCTTCTCACCCATTGCCTTTCTTACATGGAGTTGCTTCTCTCCATATCCCAAATACAGCTAACAAATCAGACATTGTTACATTACTGGTTGTGTCCATTGGTTTTTCAGCTACAATCTTCCCAAGCTCAAGGTTCTTGTGGATCCAACCACTCAAGTCCTAAAAAGCTTTTCCAGATCATTGGATCGGTCTTGACCGTCATAATACTCATAGAAAATCGAAAATCTTCCTGCCTTACTAATTTGGTTTTAAAATTAATTCCGCATACTAATTTGGTTTTCAAAAACAACTCTAGGTCATTTGAAACATCGACAATAGAAGATATACTCAATTTGAAAAACATAACCAAATAAAAATCATACTCCACCCTCAAAACAACAAGCGTATTTTTACTCAAACTTCGTCGTGAAGTGGCTCAAAGATTTTTAACCTAAAAAAATGTTTAATCGGTGTTAAAAAGCACATTAGATATAACACTTATAGAATGATAATAAATAAGTGTAATATTTACGAAGAATCGTAAATATCAATTAAGGATAGGTTTTATCATTTGGTTAAAATTACGGGTATTTAAGACGACGTGATTGGTATACTTATTTGCAACCACTCTCCTAACGGGTTCTTAACACTCCGTTCTTTCATGGGTTTTGGGCCGTAAATCGTAAGGAGATTTGGACTGAACCATAAATCTTTGTTTCGTCCGAAGCTTTTTTCGCCATTGCTTCTCCGGTCTGATCTTCACATTCGCTTCAGCTGTATGCATATTCGATCAGCACAAGATGGAAAAGTTCTTCTCGGTGCAGCAAATCCACACTCGCTGCGAATCTTCCCATTCAATCAAGCTTGTTTCGGGGCCTCCTTCCTGGTACTGACCACCCACATCCCTCTCTCGTTTCTTCTTCATTTCATTGAATTCGTTCTAATTTTCCTCAAAATTTGCAGTGGAAAAACCTCCTTGCTTTTTCAGTTCGCTTTTAATTTGGGTCTGGAGGGCAATGTTACCTTCATCTGCAACCGCCGCAAATTAGAAAACAAACCTCCATATCTTTCTCAGGTATCTCTATCACTTTTTTTTGCTTCTGTCTCTTTCATTGGCGGTTATATTGAATAGAATAGAATGATGTACATTTTCTGAATCTTGGGGTTCTTTGGGACTAACATTCAGGGAGTTGATCCAACATCCGAAACCTTTCGGCGTATACAAATGAAGTCGGTGATCGTTTTATTCTTTGTACTAATTGGGTTGCCATATTTGATGATTGAGTACTTCTGCCCTTCCTTTAATTGCTTTACTTGAACCTGTATTCTCTAATTCTGAATTCCAAGGTATTTGGAGGATGACGATGGAATTAAGAAGTACTTCTCTGCGTTTCACTTACATAGTACACTTCCTGTGGCGGTTGTTATTGATGATTTTGGGGATTTTTTCGAGGAAAGGTCTTCAAATTTTCCATTAATTTTTTTATTATTATTATTATTATTATTATTATCTTTTTATAAGTTTTTCTTTCTCATTTTCACTCCGTCATCTATTTAACAGGCGATGTCAAGCAAAATATGCTAATCCTCGCGGAAGAGACATAGCAATGGTTAGAACATTAGCTCTTTGTCACAATGCCGTGAGTCTAGCAAAGTAGGTTTGCATATATCAGAACTTTCTGTGAATAAATTGATCTCTTAGATTACATCTACACCCTTTTCTTCGCTGCTTATAACTAAGAAGATTTTTCAGTCAATGTAGGCCTTGCCAGCTTGTGTTGTCTGATACACACCATGGAGAGTCCCCAAGGTTGATTTTCATATATAAGAGATGGGTTCCAACCATTTTCACCATAAGAGGTTAGTTTGAGTTGAGTGACTGCTCTACCTAAATTCAAAGCAGATTCCCTTGTTTTTTGTTGTTTGTGTTTTACATGGTCAAGCCAGAAAATACAGACCTACTAGTGGAGCAAGCTAATTCTGTGGCCTTCATTATGGTTAACTTAGCTGATATGCCATTTTGACTTTTCCTTATTGAATTAATTTTGGTTTATGTTGAAGGTGATGGGGCTGGTTGGTTTATCCTGAGAAGTATTAACAATTGTGGAAATGATTGTTGTTTGAGGACTAAAAGAGCAAAGTATTCGATTGCTCTTCAGTTCCTGAGTTTGGAGGAAATTTCTGAAGACAGTAGGGAACGGTGAATATCTTGGCAGCTTGAGCGATTCATTTGTAAGTATGTCTATTGATCTTTTCTTTTTAGGACTTCTATGATATTTTACTGTTGATATATTAGTATTTATTGTTAAAGAACAATCTTCTGATATCAGTTTCTCTATTGTCTAATCTTAGTGTCTATATAAGATAACTTTTATGATGGGTGATTCATTGTTCTCTGTATATTATAAATCAATCAAGCTTTTGATATGTCAATCTTGAAACAGCTTGAAATTCTTTCTATTTTCTCACTAAGTGAACAAGCAGTTTGTTTATGGAAAATTATTGCCTTCCAGACGATCACAAAAATGGTTCCCTCTGTCGTTCTACTACTATAATTTGTATTTATCTTAGAAGAGATGGTCTTTATGTTCTTTCAGAATATCGAGTATTGATCAGCATTGAAGAACTTTGTAGTCAATTAATCATTTACAGGCATAAGAGAGCAAAGGAGAAAAGAAAATTAAAAAAACAACTGAAAGTTGACTCTAGGCTCAACCCTTGTTTATATGTACTAATTCCCAATAAGATTTTTTTTTCTAGTAAACTCCTTTTTGATACTCTGGATCACAGAACTCACCACCCAAATCATCACAAGCCTCCGCCGGAAAGACTCTGCAAGAATCATTTAAAAGACAAGAATATCAATGCATGTAGAAGTATGAAATAGTGTTGTTTCATAAAAAACGAATTAATAGAGGATGAAAGGTCCTATGGTTTGTTGCTTTGAGATCTTACGTCTTGGGACTGTCATATTGTAGATACTCTCTCTCAACTGGCTCTGTAACACTACTCCCTTTTTTGGCCTCTGGTTTTAGTTTTACTTCAGGATACATTTCCACATCACAAGCTTCACCTCCTACAGTGTCACAAGCCTCTGCTGGAAAAACACTTCAAAAATAG

mRNA sequence

CGGGAGGGATGTCCTTCAATCATGTTCTATATATGTGGATTCTATATATGTTGATGTACCTTCTTTCTCCTAATATATACAAACCACTTGGTGGTGTTTTTACAAGCTAAATCATAGGAACATAACTCAGCTTACACACACCATCGATTCACTAGTAATCATTGCTGGAATATTTCCTCCGTTTGAAGTGGTGAAATCTGTTCGAGTCTCTTACGACTACATCTGGACCCACCTCCTAGGAGACATCTTTAGCAAACTCAAGGCAGTCTTTATATGCTCTGAGGGTCTTGAAAGCCAGGATGGGAGCTTTTCATGGGAGCTCACACGCAATGGCAAGTCTCTCACTATTAACCACAAGTCGTTCTTTTCTACCTGGACAACCACATGCCTAATCCTCTTCTGTTAGAAGTGCAGTTTCCGCATACTTACCTTCGATTTTTAACTCCAGTTTTGAGTATATCTGTTCTGTTTGAGGATGGTGTCGATCGCCTACTATGAACCGGTGCGTCAAGCTCTCAAACAGCAATCCAACTGCAGCTGAGTTCCTTCTTCAAGTTCTTCTCACCCATTGCCTTTCTTACATGGAGTTGCTTCTCTCCATATCCCAAATACAGCTAACAAATCAGACATTGTTACATTACTGGTTGTGTCCATTGGTTTTTCAGCTACAATCTTCCCAAGCTCAAGGTTCTTGTGGATCCAACCACTCAAGTCCTAAAAAGCTTTTCCAGATCATTGGATCGGTCTTGACCGTCATAATACTCATAGAAAATCGAAAATCTTCCTGCCTTACTAATTTGGTTTTAAAATTAATTCCGCATACTAATTTGGTTTTCAAAAACAACTCTAGGTCATTTGAAACATCGACAATAGAAGATATACTCAATTTGAAAAACATAACCAAATAAAAATCATACTCCACCCTCAAAACAACAAGCGTATTTTTACTCAAACTTCGTCGTGAAGTGGCTCAAAGATTTTTAACCTAAAAAAATGTTTAATCGGTGTTAAAAAGCACATTAGATATAACACTTATAGAATGATAATAAATAAGTGTAATATTTACGAAGAATCGTAAATATCAATTAAGGATAGGTTTTATCATTTGGTTAAAATTACGGGTATTTAAGACGACGTGATTGGTATACTTATTTGCAACCACTCTCCTAACGGGTTCTTAACACTCCGTTCTTTCATGGGTTTTGGGCCGTAAATCGTAAGGAGATTTGGACTGAACCATAAATCTTTGTTTCGTCCGAAGCTTTTTTCGCCATTGCTTCTCCGGTCTGATCTTCACATTCGCTTCAGCTGTATGCATATTCGATCAGCACAAGATGGAAAAGTTCTTCTCGGTGCAGCAAATCCACACTCGCTGCGAATCTTCCCATTCAATCAAGCTTGTTTCGGGGCCTCCTTCCTGTTCGCTTTTAATTTGGGTCTGGAGGGCAATGTTACCTTCATCTGCAACCGCCGCAAATTAGAAAACAAACCTCCATATCTTTCTCAGGATGACGATGGAATTAAGAAGTACTTCTCTGCGTTTCACTTACATAGTACACTTCCTGTGGCGGTTGTTATTGATGATTTTGGGGATTTTTTCGAGGAAAGGCGATGTCAAGCAAAATATGCTAATCCTCGCGGAAGAGACATAGCAATGGTTAGAACATTAGCTCTTTGTCACAATGCCGTGAGTCTAGCAAAGCCTTGCCAGCTTGTGTTGTCTGATACACACCATGGAGAGTCCCCAAGGTTGATTTTCATATATAAGAGATGGGTTCCAACCATTTTCACCATAAGAGGTGATGGGGCTGGTTGGTTTATCCTGAGAAGTATTAACAATTGTGGAAATGATTGTTGTTTGAGGACTAAAAGAGCAAAGTATTCGATTGCTCTTCAGTTCCTGAGTTTGGAGGAAATTTCTGAAGACAGTAGGGAACGTAAACTCCTTTTTGATACTCTGGATCACAGAACTCACCACCCAAATCATCACAAGCCTCCGCCGGAAAGACTCTGCAAGAATCATTTAAAAGACAAGAATATCAATGCATGTAGAAGATACATTTCCACATCACAAGCTTCACCTCCTACAGTGTCACAAGCCTCTGCTGGAAAAACACTTCAAAAATAG

Coding sequence (CDS)

ATGCATATTCGATCAGCACAAGATGGAAAAGTTCTTCTCGGTGCAGCAAATCCACACTCGCTGCGAATCTTCCCATTCAATCAAGCTTGTTTCGGGGCCTCCTTCCTGTTCGCTTTTAATTTGGGTCTGGAGGGCAATGTTACCTTCATCTGCAACCGCCGCAAATTAGAAAACAAACCTCCATATCTTTCTCAGGATGACGATGGAATTAAGAAGTACTTCTCTGCGTTTCACTTACATAGTACACTTCCTGTGGCGGTTGTTATTGATGATTTTGGGGATTTTTTCGAGGAAAGGCGATGTCAAGCAAAATATGCTAATCCTCGCGGAAGAGACATAGCAATGGTTAGAACATTAGCTCTTTGTCACAATGCCGTGAGTCTAGCAAAGCCTTGCCAGCTTGTGTTGTCTGATACACACCATGGAGAGTCCCCAAGGTTGATTTTCATATATAAGAGATGGGTTCCAACCATTTTCACCATAAGAGGTGATGGGGCTGGTTGGTTTATCCTGAGAAGTATTAACAATTGTGGAAATGATTGTTGTTTGAGGACTAAAAGAGCAAAGTATTCGATTGCTCTTCAGTTCCTGAGTTTGGAGGAAATTTCTGAAGACAGTAGGGAACGTAAACTCCTTTTTGATACTCTGGATCACAGAACTCACCACCCAAATCATCACAAGCCTCCGCCGGAAAGACTCTGCAAGAATCATTTAAAAGACAAGAATATCAATGCATGTAGAAGATACATTTCCACATCACAAGCTTCACCTCCTACAGTGTCACAAGCCTCTGCTGGAAAAACACTTCAAAAATAG

Protein sequence

MHIRSAQDGKVLLGAANPHSLRIFPFNQACFGASFLFAFNLGLEGNVTFICNRRKLENKPPYLSQDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQAKYANPRGRDIAMVRTLALCHNAVSLAKPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCGNDCCLRTKRAKYSIALQFLSLEEISEDSRERKLLFDTLDHRTHHPNHHKPPPERLCKNHLKDKNINACRRYISTSQASPPTVSQASAGKTLQK
Homology
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BLAST of MELO3C022353 vs. NCBI nr
Match: TYK24648.1 (coiled-coil domain-containing protein SCD2 [Cucumis melo var. makuwa])

HSP 1 Score: 358.6 bits (919), Expect = 4.7e-95
Identity = 177/211 (83.89%), Postives = 181/211 (85.78%), Query Frame = 0 

Query: 19  HSLRIFPFNQACFGAS--FLFAFNLGLEGNVTFICNRRKLENKPPYLSQ----------- 78
           HS+++     +C   S  F FAFNLGLEGNVTFICNR KLENKPPYLSQ           
Sbjct: 647 HSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRSKLENKPPYLSQGVDPTSETFRR 706

Query: 79  -------DDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQAKYANPRGRDIAMVRT 138
                  DDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQAKYANPRGRDIAMVRT
Sbjct: 707 IQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQAKYANPRGRDIAMVRT 766

Query: 139 LALCHNAVSLAKPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCG 198
           LALCHNAVSLAKPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCG
Sbjct: 767 LALCHNAVSLAKPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCG 826

Query: 199 NDCCLRTKRAKYSIALQFLSLEEISEDSRER 210
           NDCCLRTKRAKYSIALQFLSLEEISEDSRER
Sbjct: 827 NDCCLRTKRAKYSIALQFLSLEEISEDSRER 857

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BLAST of MELO3C022353 vs. NCBI nr
Match: XP_008459907.1 (PREDICTED: uncharacterized protein LOC103498887 [Cucumis melo] >XP_008459908.1 PREDICTED: uncharacterized protein LOC103498887 [Cucumis melo] >ADN33703.1 hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 354.4 bits (908), Expect = 8.9e-94
Identity = 177/214 (82.71%), Postives = 182/214 (85.05%), Query Frame = 0 

Query: 19  HSLRIFPFNQACFGAS--FLFAFNLGLEGNVTFICNRRKLENKPPYLSQ----------- 78
           HS+++     +C   S  F FAFNLGLEGNVTFICNRRKLENKPPYLSQ           
Sbjct: 18  HSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETFRR 77

Query: 79  -------DDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQAKYANPRGRDIAMVRT 138
                  DDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQAKYANPRGRDIAMVRT
Sbjct: 78  IQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQAKYANPRGRDIAMVRT 137

Query: 139 LALCHNAVSLA---KPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSIN 198
           LALCHNAVSLA   +PCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSIN
Sbjct: 138 LALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSIN 197

Query: 199 NCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 210
           NCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER
Sbjct: 198 NCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 231

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BLAST of MELO3C022353 vs. NCBI nr
Match: KAA0039853.1 (uncharacterized protein E6C27_scaffold122G001280 [Cucumis melo var. makuwa])

HSP 1 Score: 349.7 bits (896), Expect = 2.2e-92
Identity = 175/214 (81.78%), Postives = 180/214 (84.11%), Query Frame = 0 

Query: 19  HSLRIFPFNQACFGAS--FLFAFNLGLEGNVTFICNRRKLENKPPYLSQ----------- 78
           HS+++     +C   S  F FAFNLGLEGNVTFICNRRKLENKPPYLSQ           
Sbjct: 73  HSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETFRR 132

Query: 79  -------DDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQAKYANPRGRDIAMVRT 138
                  DDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQAKYANPRGRDIAMVRT
Sbjct: 133 IQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQAKYANPRGRDIAMVRT 192

Query: 139 LALCHNAVSLA---KPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSIN 198
           LALCHNAVSLA   +PCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDG  WFILRSIN
Sbjct: 193 LALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGTRWFILRSIN 252

Query: 199 NCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 210
           NCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER
Sbjct: 253 NCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 286

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BLAST of MELO3C022353 vs. NCBI nr
Match: XP_011656789.1 (uncharacterized protein LOC101205665 [Cucumis sativus] >KAE8646754.1 hypothetical protein Csa_004885 [Cucumis sativus])

HSP 1 Score: 343.6 bits (880), Expect = 1.6e-90
Identity = 172/214 (80.37%), Postives = 179/214 (83.64%), Query Frame = 0 

Query: 19  HSLRIFPFNQACFGAS--FLFAFNLGLEGNVTFICNRRKLENKPPYLSQ----------- 78
           HS+++     +C   S  F FAFNLGLEGNVTFICNRRKLENKPPYLSQ           
Sbjct: 32  HSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETFQR 91

Query: 79  -------DDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQAKYANPRGRDIAMVRT 138
                  DDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQ KYANPRGRD+AMVRT
Sbjct: 92  IQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRT 151

Query: 139 LALCHNAVSLA---KPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSIN 198
           LALC NAVSLA   +PCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSIN
Sbjct: 152 LALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSIN 211

Query: 199 NCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 210
           NCG DCCLRTKRAKYSIALQFLSLEEISEDSRE+
Sbjct: 212 NCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ 245

[Close]
BLAST of MELO3C022353 vs. NCBI nr
Match: XP_023514984.1 (uncharacterized protein LOC111779141 [Cucurbita pepo subsp. pepo] >XP_023514985.1 uncharacterized protein LOC111779141 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 340.1 bits (871), Expect = 1.7e-89
Identity = 166/210 (79.05%), Postives = 174/210 (82.86%), Query Frame = 0 

Query: 19  HSLRIFPFNQACFGAS--FLFAFNLGLEGNVTFICNRRKLENKPPYLSQ----------- 78
           HS+ +     +C   S  F FAFNLGLEGNVTFICNRRKLENKPPYLSQ           
Sbjct: 18  HSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPASETFQR 77

Query: 79  -------DDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQAKYANPRGRDIAMVRT 138
                  DD+GI KYFSAFHLH TLPVAVVIDDFGDFFEERRCQ KYANPRGRD+AMVRT
Sbjct: 78  IQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRT 137

Query: 139 LALCHNAVSLAKPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCG 198
           LALCHNA+SLAKPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDG+GWFILRSINNCG
Sbjct: 138 LALCHNAMSLAKPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWFILRSINNCG 197

Query: 199 NDCCLRTKRAKYSIALQFLSLEEISEDSRE 209
           NDCCLRTK AKYSIALQFLSLEE+SED  E
Sbjct: 198 NDCCLRTKSAKYSIALQFLSLEEVSEDITE 227

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BLAST of MELO3C022353 vs. ExPASy TrEMBL
Match: A0A5D3DM33 (Coiled-coil domain-containing protein SCD2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001970 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 2.3e-95
Identity = 177/211 (83.89%), Postives = 181/211 (85.78%), Query Frame = 0 

Query: 19  HSLRIFPFNQACFGAS--FLFAFNLGLEGNVTFICNRRKLENKPPYLSQ----------- 78
           HS+++     +C   S  F FAFNLGLEGNVTFICNR KLENKPPYLSQ           
Sbjct: 647 HSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRSKLENKPPYLSQGVDPTSETFRR 706

Query: 79  -------DDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQAKYANPRGRDIAMVRT 138
                  DDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQAKYANPRGRDIAMVRT
Sbjct: 707 IQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQAKYANPRGRDIAMVRT 766

Query: 139 LALCHNAVSLAKPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCG 198
           LALCHNAVSLAKPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCG
Sbjct: 767 LALCHNAVSLAKPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCG 826

Query: 199 NDCCLRTKRAKYSIALQFLSLEEISEDSRER 210
           NDCCLRTKRAKYSIALQFLSLEEISEDSRER
Sbjct: 827 NDCCLRTKRAKYSIALQFLSLEEISEDSRER 857

[Close]
BLAST of MELO3C022353 vs. ExPASy TrEMBL
Match: A0A1S3CAT0 (uncharacterized protein LOC103498887 OS=Cucumis melo OX=3656 GN=LOC103498887 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 4.3e-94
Identity = 177/214 (82.71%), Postives = 182/214 (85.05%), Query Frame = 0 

Query: 19  HSLRIFPFNQACFGAS--FLFAFNLGLEGNVTFICNRRKLENKPPYLSQ----------- 78
           HS+++     +C   S  F FAFNLGLEGNVTFICNRRKLENKPPYLSQ           
Sbjct: 18  HSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETFRR 77

Query: 79  -------DDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQAKYANPRGRDIAMVRT 138
                  DDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQAKYANPRGRDIAMVRT
Sbjct: 78  IQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQAKYANPRGRDIAMVRT 137

Query: 139 LALCHNAVSLA---KPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSIN 198
           LALCHNAVSLA   +PCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSIN
Sbjct: 138 LALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSIN 197

Query: 199 NCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 210
           NCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER
Sbjct: 198 NCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 231

[Close]
BLAST of MELO3C022353 vs. ExPASy TrEMBL
Match: E5GB61 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 4.3e-94
Identity = 177/214 (82.71%), Postives = 182/214 (85.05%), Query Frame = 0 

Query: 19  HSLRIFPFNQACFGAS--FLFAFNLGLEGNVTFICNRRKLENKPPYLSQ----------- 78
           HS+++     +C   S  F FAFNLGLEGNVTFICNRRKLENKPPYLSQ           
Sbjct: 18  HSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETFRR 77

Query: 79  -------DDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQAKYANPRGRDIAMVRT 138
                  DDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQAKYANPRGRDIAMVRT
Sbjct: 78  IQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQAKYANPRGRDIAMVRT 137

Query: 139 LALCHNAVSLA---KPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSIN 198
           LALCHNAVSLA   +PCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSIN
Sbjct: 138 LALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSIN 197

Query: 199 NCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 210
           NCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER
Sbjct: 198 NCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 231

[Close]
BLAST of MELO3C022353 vs. ExPASy TrEMBL
Match: A0A5A7T9Y8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G001280 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 1.1e-92
Identity = 175/214 (81.78%), Postives = 180/214 (84.11%), Query Frame = 0 

Query: 19  HSLRIFPFNQACFGAS--FLFAFNLGLEGNVTFICNRRKLENKPPYLSQ----------- 78
           HS+++     +C   S  F FAFNLGLEGNVTFICNRRKLENKPPYLSQ           
Sbjct: 73  HSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETFRR 132

Query: 79  -------DDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQAKYANPRGRDIAMVRT 138
                  DDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQAKYANPRGRDIAMVRT
Sbjct: 133 IQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQAKYANPRGRDIAMVRT 192

Query: 139 LALCHNAVSLA---KPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSIN 198
           LALCHNAVSLA   +PCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDG  WFILRSIN
Sbjct: 193 LALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGTRWFILRSIN 252

Query: 199 NCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 210
           NCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER
Sbjct: 253 NCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 286

[Close]
BLAST of MELO3C022353 vs. ExPASy TrEMBL
Match: A0A0A0K9H1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091880 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 7.6e-91
Identity = 172/214 (80.37%), Postives = 179/214 (83.64%), Query Frame = 0 

Query: 19  HSLRIFPFNQACFGAS--FLFAFNLGLEGNVTFICNRRKLENKPPYLSQ----------- 78
           HS+++     +C   S  F FAFNLGLEGNVTFICNRRKLENKPPYLSQ           
Sbjct: 18  HSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETFQR 77

Query: 79  -------DDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQAKYANPRGRDIAMVRT 138
                  DDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQ KYANPRGRD+AMVRT
Sbjct: 78  IQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRT 137

Query: 139 LALCHNAVSLA---KPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSIN 198
           LALC NAVSLA   +PCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSIN
Sbjct: 138 LALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSIN 197

Query: 199 NCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 210
           NCG DCCLRTKRAKYSIALQFLSLEEISEDSRE+
Sbjct: 198 NCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ 231

[Close]
BLAST of MELO3C022353 vs. TAIR 10
Match: AT3G23255.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 52 Blast hits to 52 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 181.8 bits (460), Expect = 7.4e-46
Identity = 98/182 (53.85%), Postives = 123/182 (67.58%), Query Frame = 0 

Query: 47  VTFICNRRKLENKPPYLSQ------------------DDDGIKKYFSAFHLH--STLPVA 106
           V FIC+R+K+E+ PP+LSQ                  DD+GI+KYF+AFHLH    LP A
Sbjct: 53  VVFICHRKKIESNPPFLSQGIDPSSDVFNRIQIKYVDDDEGIRKYFAAFHLHHVDDLPSA 112

Query: 107 VVIDDFGDFFEERRCQAKYANPRGRDIAMVRTLALCHNAVSLAKP--CQLVLSDTHHGES 166
           V+IDDFGD+F +        N R RD+AMVRTLALCHNA+  AK   C+LVLS+T+HG+S
Sbjct: 113 VIIDDFGDYFSKLN---SVMNSRARDMAMVRTLALCHNAIVDAKKALCELVLSETNHGDS 172

Query: 167 PRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCGNDCCLRTKRAKYSIALQFLSLEEISE 207
           PR +FIYKRW+P IFTI+G G G F+L S     ND   R+  AKYSIALQ+L LE+I +
Sbjct: 173 PRSLFIYKRWIPKIFTIKGHGDGSFLLTS-----NDTSERS--AKYSIALQYLILEQIID 224

[Close]
BLAST of MELO3C022353 vs. TAIR 10
Match: AT3G23255.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown. )

HSP 1 Score: 179.1 bits (453), Expect = 4.8e-45
Identity = 97/183 (53.01%), Postives = 122/183 (66.67%), Query Frame = 0 

Query: 47  VTFICNRRKLENKPPYLSQ------------------DDDGIKKYFSAFHLH--STLPVA 106
           V FIC+R+K+E+ PP+LSQ                  DD+GI+KYF+AFHLH    LP A
Sbjct: 53  VVFICHRKKIESNPPFLSQGIDPSSDVFNRIQIKYVDDDEGIRKYFAAFHLHHVDDLPSA 112

Query: 107 VVIDDFGDFFEERRCQAKYANPRGRDIAMVRTLALCHNAVSLAKP---CQLVLSDTHHGE 166
           V+IDDFGD+F +        N R RD+AMVRTLALCHNA+  A     C+LVLS+T+HG+
Sbjct: 113 VIIDDFGDYFSKLN---SVMNSRARDMAMVRTLALCHNAIVDANRKALCELVLSETNHGD 172

Query: 167 SPRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCGNDCCLRTKRAKYSIALQFLSLEEIS 207
           SPR +FIYKRW+P IFTI+G G G F+L S     ND   R+  AKYSIALQ+L LE+I 
Sbjct: 173 SPRSLFIYKRWIPKIFTIKGHGDGSFLLTS-----NDTSERS--AKYSIALQYLILEQII 225

The following BLAST results are available for this feature:
BLAST of MELO3C022353 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C022353 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK24648.14.7e-9583.89coiled-coil domain-containing protein SCD2 [Cucumis melo var. makuwa][more]
XP_008459907.18.9e-9482.71PREDICTED: uncharacterized protein LOC103498887 [Cucumis melo] >XP_008459908.1 P... [more]
KAA0039853.12.2e-9281.78uncharacterized protein E6C27_scaffold122G001280 [Cucumis melo var. makuwa][more]
XP_011656789.11.6e-9080.37uncharacterized protein LOC101205665 [Cucumis sativus] >KAE8646754.1 hypothetica... [more]
XP_023514984.11.7e-8979.05uncharacterized protein LOC111779141 [Cucurbita pepo subsp. pepo] >XP_023514985.... [more]
BLAST of MELO3C022353 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DM332.3e-9583.89Coiled-coil domain-containing protein SCD2 OS=Cucumis melo var. makuwa OX=119469... [more]
A0A1S3CAT04.3e-9482.71uncharacterized protein LOC103498887 OS=Cucumis melo OX=3656 GN=LOC103498887 PE=... [more]
E5GB614.3e-9482.71Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
A0A5A7T9Y81.1e-9281.78Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0K9H17.6e-9180.37Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091880 PE=4 SV=1[more]
BLAST of MELO3C022353 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G23255.17.4e-4653.85unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G23255.24.8e-4553.01unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR28653FAMILY NOT NAMEDcoord: 35..209

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C022353.1MELO3C022353.1mRNA