MELO3C022328 (gene) Melon (DHL92) v4

Overview


Name	MELO3C022328
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	farnesylated protein 3
Location	chr11: 30412149 .. 30412949 (+)
RNA-Seq Expression	MELO3C022328
Synteny	MELO3C022328

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGGTGTTATTGTGGTTCTACAATATAATGCCCATTGTAACAATTGTATACATCAAATGAAGAAATGTTGCCAGAATATGAAAGGTATGAAATAAATTTAATTTCCAAATTGAATATATTTTGATATTATAGTTACTTTGATTATAATTATAACCTTGACTCCTAATCGGACTAGCTTTTGTTGAGTACATCATGTGTCTCAACTTTAATACTATTTTAGTATTTTGTTTATTTTTATTAGGTGAATATATATAATTATATTTGAAATTATAATATTTGTATATTCTTTTGTTGTTGGATATGGAAAAAAAGTAGGAGTAATCAGTGCAGAAATTGACAAGGAAGTTCCTGAACTGATAACGGTAAAGGGAGTTTTTGAAGTGAAAAAGCTTTTGGCTCACATCAGAAAAGGAGTCGAGAAAATTGTCACCGTCATCAAAGAAGAACCCGCCACTGCCGGAAGCAGCACCGCCGTCGGAGGAGAAGAACAAAGAGAGGCTGCTGGAGAAGGGAGTAGCCGTGGAGCTAACCACGAGATAGAAGAAGCAGAAGAAGAAAAAGAAGAAGACGACGACGGAGATGGAGAGATAAGAGTTATATATAATCCGTAAAATAAATAGATTTTATGTTAATGATAGATACGAATTCTATGAATGTCCATCGATGACACTTTTATTCGTTTCCGTCAATGTAACGAAATTTTAGATTTTATATCATTAATAGGTATGAATTCTATAAATATTTATCAATGACACTTTTATCCGTTTCTGTCAATGTAATTGATAGACACCGACTTCTATC

mRNA sequence

AGGGTGTTATTGTGGTTCTACAATATAATGCCCATTGTAACAATTGTATACATCAAATGAAGAAATGTTGCCAGAATATGAAAGGAGTAATCAGTGCAGAAATTGACAAGGAAGTTCCTGAACTGATAACGGTAAAGGGAGTTTTTGAAGTGAAAAAGCTTTTGGCTCACATCAGAAAAGGAGTCGAGAAAATTGTCACCGTCATCAAAGAAGAACCCGCCACTGCCGGAAGCAGCACCGCCGTCGGAGGAGAAGAACAAAGAGAGGCTGCTGGAGAAGGGAGTAGCCGTGGAGCTAACCACGAGATAGAAGAAGCAGAAGAAGAAAAAGAAGAAGACGACGACGGAGATGGAGAGATAAGAGTTATATATAATCCGTAAAATAAATAGATTTTATGTTAATGATAGATACGAATTCTATGAATGTCCATCGATGACACTTTTATTCGTTTCCGTCAATGTAACGAAATTTTAGATTTTATATCATTAATAGGTATGAATTCTATAAATATTTATCAATGACACTTTTATCCGTTTCTGTCAATGTAATTGATAGACACCGACTTCTATC

Coding sequence (CDS)

ATGAAGAAATGTTGCCAGAATATGAAAGGAGTAATCAGTGCAGAAATTGACAAGGAAGTTCCTGAACTGATAACGGTAAAGGGAGTTTTTGAAGTGAAAAAGCTTTTGGCTCACATCAGAAAAGGAGTCGAGAAAATTGTCACCGTCATCAAAGAAGAACCCGCCACTGCCGGAAGCAGCACCGCCGTCGGAGGAGAAGAACAAAGAGAGGCTGCTGGAGAAGGGAGTAGCCGTGGAGCTAACCACGAGATAGAAGAAGCAGAAGAAGAAAAAGAAGAAGACGACGACGGAGATGGAGAGATAAGAGTTATATATAATCCGTAA

Protein sequence

MKKCCQNMKGVISAEIDKEVPELITVKGVFEVKKLLAHIRKGVEKIVTVIKEEPATAGSSTAVGGEEQREAAGEGSSRGANHEIEEAEEEKEEDDDGDGEIRVIYNP

Homology

[Close]

BLAST of MELO3C022328 vs. ExPASy Swiss-Prot
Match: Q9C5D3 (Heavy metal-associated isoprenylated plant protein 7 OS=Arabidopsis thaliana OX=3702 GN=HIPP07 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 5.4e-05
Identity = 41/106 (38.68%), Postives = 62/106 (58.49%), Query Frame = 0


Query: 1   MKKCCQNMKGVISAEIDKEVPELITVKGVFEVKKLLAHIRKGVEKIVTVIKEE----PAT 60
           +KK    MKGV SAE D +  + +TVKGVFE +KL+ ++ K   K   ++K +    P  
Sbjct: 188 IKKRIMRMKGVESAESDLKSSQ-VTVKGVFEPQKLVEYVYKRTGKHAAIMKIDPPPPPPP 247

Query: 61  AGSSTAVGGEEQREAAGEGSSRGANHEIEEA--EEEKEEDDDGDGE 101
             ++ A  GE++ E  GEG S+G   + ++A  +EEK+E D G GE
Sbjct: 248 EEAAAAAEGEKKEEEKGEGESKGEEGKDDKAKTDEEKKEGDGGKGE 292

[Close]

BLAST of MELO3C022328 vs. NCBI nr
Match: KAA0039827.1 (hypothetical protein E6C27_scaffold122G001020 [Cucumis melo var. makuwa] >TYK24671.1 hypothetical protein E5676_scaffold266G002210 [Cucumis melo var. makuwa])

HSP 1 Score: 170.6 bits (431), Expect = 7.2e-39
Identity = 96/98 (97.96%), Postives = 97/98 (98.98%), Query Frame = 0


Query: 10  GVISAEIDKEVPELITVKGVFEVKKLLAHIRKGVEKIVTVIKEEPATAGSSTAVGGEEQR 69
           GVISAEIDKEVPELITVKGVFEVKKLLAHIRKGVEKIVTVIKEEPATAGSSTAVGGEEQR
Sbjct: 48  GVISAEIDKEVPELITVKGVFEVKKLLAHIRKGVEKIVTVIKEEPATAGSSTAVGGEEQR 107

Query: 70  EAAGEGSSRGANHEIEEAEEEKEEDDDGDGEIRVIYNP 108
           EAAGEGSSRGANHEI EAEEEKEE+DDGDGEIRVIYNP
Sbjct: 108 EAAGEGSSRGANHEI-EAEEEKEEEDDGDGEIRVIYNP 144

[Close]

BLAST of MELO3C022328 vs. NCBI nr
Match: KAE8646758.1 (hypothetical protein Csa_005466 [Cucumis sativus])

HSP 1 Score: 101.3 bits (251), Expect = 5.4e-18
Identity = 63/94 (67.02%), Postives = 73/94 (77.66%), Query Frame = 0


Query: 1   MKKCCQNMKGVISAEIDKEVPELITVKGVFEVKKLLAHIRKGVEKIVTVIKEEPATAGSS 60
           MKKCC+NMK     EIDKEVPELITVKGVFEVKKLLAHIR+GVEKI TVIKEEPA+AG  
Sbjct: 45  MKKCCKNMK-----EIDKEVPELITVKGVFEVKKLLAHIRRGVEKIATVIKEEPASAG-- 104

Query: 61  TAVGGEEQREAAGEGSS--RGANHEIEEAEEEKE 93
              G ++QREAAGEG+S   G N   +  +EE++
Sbjct: 105 ---GEDQQREAAGEGTSLIEGQNQNGKRRQEEEK 128

[Close]

BLAST of MELO3C022328 vs. NCBI nr
Match: XP_022989967.1 (uncharacterized protein LOC111486994 [Cucurbita maxima])

HSP 1 Score: 89.7 bits (221), Expect = 1.6e-14
Identity = 56/93 (60.22%), Postives = 66/93 (70.97%), Query Frame = 0


Query: 1  MKKCCQNMKGVISAEIDKEVPELITVKGVFEVKKLLAHIRKGVEKIVTVIKEEPATAGSS 60
          MKKC Q MKG+ SAE+D+E PELITVKGVFEV+KL+AH+R+GV+KIVT+IKEE A  G S
Sbjct: 1  MKKCVQRMKGIESAEVDEENPELITVKGVFEVQKLVAHLRRGVDKIVTIIKEENAAGGGS 60

Query: 61 TAVGGEEQREAAGEGSSRGANHEIEEAEEEKEE 94
             GGEE  EAA  G       EI  A   KE+
Sbjct: 61 G--GGEEGIEAAAAGGGSKQKIEITAAGGGKEQ 91

[Close]

BLAST of MELO3C022328 vs. NCBI nr
Match: KAG6600923.1 (hypothetical protein SDJN03_06156, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 75.9 bits (185), Expect = 2.4e-10
Identity = 49/85 (57.65%), Postives = 60/85 (70.59%), Query Frame = 0


Query: 9  KGVISAEIDKEVPELITVKGVFEVKKLLAHIRKGVEKIVTVIKEEPATAGSSTAVGGEEQ 68
          +GV SAE+D+E PELITVKGVFEV+KL+AH+R+GV+KIVTVIKEE A  G S   GGEE 
Sbjct: 4  EGVESAEVDEENPELITVKGVFEVQKLVAHVRRGVDKIVTVIKEENAAGGGSG--GGEEG 63

Query: 69 REAAGEGSSRGANHEIEEAEEEKEE 94
           EAA  G       E   A + +E+
Sbjct: 64 IEAAAAGGGSEQKIEFAAAGDGREQ 86

[Close]

BLAST of MELO3C022328 vs. NCBI nr
Match: KAG7014642.1 (Heavy metal-associated isoprenylated plant protein 8, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 67.4 bits (163), Expect = 8.6e-08
Identity = 40/69 (57.97%), Postives = 51/69 (73.91%), Query Frame = 0


Query: 9  KGVISAEIDKEVPELITVKGVFEVKKLLAHIRKGVEKIVTVIKEEPATAGSSTAVGGEEQ 68
          KGV S ++++E PELI V GVFEV+KL+AHIR+GV+KIVTV+K+E A  G S    GE+Q
Sbjct: 26 KGVQSVQVEEESPELIRVTGVFEVQKLVAHIRRGVDKIVTVVKQENAAGGGSG--DGEQQ 85

Query: 69 REAAGEGSS 78
           E A  G S
Sbjct: 86 IEDAPTGGS 92

[Close]

BLAST of MELO3C022328 vs. ExPASy TrEMBL
Match: A0A5A7TE72 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002210 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.5e-39
Identity = 96/98 (97.96%), Postives = 97/98 (98.98%), Query Frame = 0


Query: 10  GVISAEIDKEVPELITVKGVFEVKKLLAHIRKGVEKIVTVIKEEPATAGSSTAVGGEEQR 69
           GVISAEIDKEVPELITVKGVFEVKKLLAHIRKGVEKIVTVIKEEPATAGSSTAVGGEEQR
Sbjct: 48  GVISAEIDKEVPELITVKGVFEVKKLLAHIRKGVEKIVTVIKEEPATAGSSTAVGGEEQR 107

Query: 70  EAAGEGSSRGANHEIEEAEEEKEEDDDGDGEIRVIYNP 108
           EAAGEGSSRGANHEI EAEEEKEE+DDGDGEIRVIYNP
Sbjct: 108 EAAGEGSSRGANHEI-EAEEEKEEEDDGDGEIRVIYNP 144

[Close]

BLAST of MELO3C022328 vs. ExPASy TrEMBL
Match: A0A0A0KDJ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G094160 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.7e-30
Identity = 82/102 (80.39%), Postives = 90/102 (88.24%), Query Frame = 0


Query: 8   MKGVISAEIDKEVPELITVKGVFEVKKLLAHIRKGVEKIVTVIKEEPATAGSSTAVGGEE 67
           MKGVISAEIDKEVPELITVKGVFEVKKLLAHIR+GVEKI TVIKEEPA+AG     G ++
Sbjct: 1   MKGVISAEIDKEVPELITVKGVFEVKKLLAHIRRGVEKIATVIKEEPASAG-----GEDQ 60

Query: 68  QREAAGEGSSRGANHEIEEAEEE--KEEDDDGDGEIRVIYNP 108
           QREAAGEG+SRG NHEIEE EEE   ++DDDGDGEIRVI+NP
Sbjct: 61  QREAAGEGTSRGPNHEIEEEEEEDDDDDDDDGDGEIRVIHNP 97

[Close]

BLAST of MELO3C022328 vs. ExPASy TrEMBL
Match: A0A6J1JHA3 (uncharacterized protein LOC111486994 OS=Cucurbita maxima OX=3661 GN=LOC111486994 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 7.8e-15
Identity = 56/93 (60.22%), Postives = 66/93 (70.97%), Query Frame = 0


Query: 1  MKKCCQNMKGVISAEIDKEVPELITVKGVFEVKKLLAHIRKGVEKIVTVIKEEPATAGSS 60
          MKKC Q MKG+ SAE+D+E PELITVKGVFEV+KL+AH+R+GV+KIVT+IKEE A  G S
Sbjct: 1  MKKCVQRMKGIESAEVDEENPELITVKGVFEVQKLVAHLRRGVDKIVTIIKEENAAGGGS 60

Query: 61 TAVGGEEQREAAGEGSSRGANHEIEEAEEEKEE 94
             GGEE  EAA  G       EI  A   KE+
Sbjct: 61 G--GGEEGIEAAAAGGGSKQKIEITAAGGGKEQ 91

[Close]

BLAST of MELO3C022328 vs. TAIR 10
Match: AT5G63530.1 (farnesylated protein 3 )

HSP 1 Score: 48.5 bits (114), Expect = 3.8e-06
Identity = 41/106 (38.68%), Postives = 62/106 (58.49%), Query Frame = 0


Query: 1   MKKCCQNMKGVISAEIDKEVPELITVKGVFEVKKLLAHIRKGVEKIVTVIKEE----PAT 60
           +KK    MKGV SAE D +  + +TVKGVFE +KL+ ++ K   K   ++K +    P  
Sbjct: 188 IKKRIMRMKGVESAESDLKSSQ-VTVKGVFEPQKLVEYVYKRTGKHAAIMKIDPPPPPPP 247

Query: 61  AGSSTAVGGEEQREAAGEGSSRGANHEIEEA--EEEKEEDDDGDGE 101
             ++ A  GE++ E  GEG S+G   + ++A  +EEK+E D G GE
Sbjct: 248 EEAAAAAEGEKKEEEKGEGESKGEEGKDDKAKTDEEKKEGDGGKGE 292

[Close]

BLAST of MELO3C022328 vs. TAIR 10
Match: AT5G63530.2 (farnesylated protein 3 )

HSP 1 Score: 48.5 bits (114), Expect = 3.8e-06
Identity = 41/106 (38.68%), Postives = 62/106 (58.49%), Query Frame = 0


Query: 1   MKKCCQNMKGVISAEIDKEVPELITVKGVFEVKKLLAHIRKGVEKIVTVIKEE----PAT 60
           +KK    MKGV SAE D +  + +TVKGVFE +KL+ ++ K   K   ++K +    P  
Sbjct: 173 IKKRIMRMKGVESAESDLKSSQ-VTVKGVFEPQKLVEYVYKRTGKHAAIMKIDPPPPPPP 232

Query: 61  AGSSTAVGGEEQREAAGEGSSRGANHEIEEA--EEEKEEDDDGDGE 101
             ++ A  GE++ E  GEG S+G   + ++A  +EEK+E D G GE
Sbjct: 233 EEAAAAAEGEKKEEEKGEGESKGEEGKDDKAKTDEEKKEGDGGKGE 277

The following BLAST results are available for this feature:

BLAST of MELO3C022328 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C5D3	5.4e-05	38.68	Heavy metal-associated isoprenylated plant protein 7 OS=Arabidopsis thaliana OX=...	[more]

BLAST of MELO3C022328 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0039827.1	7.2e-39	97.96	hypothetical protein E6C27_scaffold122G001020 [Cucumis melo var. makuwa] >TYK246...	[more]
KAE8646758.1	5.4e-18	67.02	hypothetical protein Csa_005466 [Cucumis sativus]	[more]
XP_022989967.1	1.6e-14	60.22	uncharacterized protein LOC111486994 [Cucurbita maxima]	[more]
KAG6600923.1	2.4e-10	57.65	hypothetical protein SDJN03_06156, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7014642.1	8.6e-08	57.97	Heavy metal-associated isoprenylated plant protein 8, partial [Cucurbita argyros...	[more]

BLAST of MELO3C022328 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TE72	3.5e-39	97.96	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KDJ7	1.7e-30	80.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G094160 PE=4 SV=1	[more]
A0A6J1JHA3	7.8e-15	60.22	uncharacterized protein LOC111486994 OS=Cucurbita maxima OX=3661 GN=LOC111486994...	[more]

BLAST of MELO3C022328 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G63530.1	3.8e-06	38.68	farnesylated protein 3	[more]
AT5G63530.2	3.8e-06	38.68	farnesylated protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C022328.1	MELO3C022328.1	mRNA