MELO3C022205 (gene) Melon (DHL92) v4

Overview


Name	MELO3C022205
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	agamous-like MADS-box protein AGL12
Location	chr09: 268946 .. 271029 (-)
RNA-Seq Expression	MELO3C022205
Synteny	MELO3C022205

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCGTGGGAAAGTTCAAATGAAAAGGATTGAGAATCCAGTGCATAGACAAGTTACTTTCTGCAAGCGTCGAGCTGGGCTCCTCAAGAAGGCTAAGGAGCTCTCTGTGCTTTGCGATGCTGAAATTGGACTCTTCATTTTCTCCGCTCATGGAAAGCTCTATGAACTCGCCACTAAAGGGTACGTATAATATCATATAAACCCCTTCCCTTCCCTCCTCCCCGGCCCCTTCCTTATTCATCTCTCTTTTCCTCTTTCTATCAATCATTCTACTTACCCTTCTGCTATATTACAACACACACCTTCTGCTTCTCTTCTATACAATTATAGAGTACTTATCTTACATACTCATTTGTTGGAGACTCAAATAACATATTCTAATAACTTCAAATACTATGTTATATGTCGTAGTAGCTAGTGAATGTCTAAATCCTAGGTACGTAGTCCACTTATTTCTTTGCACATAAAGTGTATATATATATATATATATAAAAAGTTTGTTACATAATAACTTTACCATATAAATTTTTTCAAACAAAAAAAAATACAACTTTACCGTATAATCAAATTGGTTACAATTTAAAATGCACCAAATTATTACGAAAAGAGCCAATTTAATTGGATGCATATGTCAATGACACATAACTCAACAAGAAAAGTAAAGGAAATCCGATACACACTTTTTCACAAGATCAAGAGGGTTAATATTAAAACCATGAATATCACATTATTTAACGAATGATATTTGTTTAAGAAAAAAAAAAAAGGAGGAATTTTGGTGGTGTGTAGAATAATAAAGAAAGAAAGAAAGAAATGTGTAAATATTCTTTATGAGTATTGGTTTGATTTCATGTTGGAGGATATAGAACCATGCAAGGGCTTATTGAAAGGTACATGAAGCACACCAATGGGAATCAGCCACCAGACCCACCAATTCATCACCAAACTTCGGTACTCTCTCTCTCTCTCTCTCTCTTTTTTAATTTGGATGTGACAAATAGGGTTAATTGTTTTTTTGTTTTTTTTTTCTTTTTTAATCTATGGATAAGAACCATCATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTTTCATTAAAATTTTATACTTAATTTAATTACTCCTATATTATATATAATTCTTTTAAATTTCTTAATCAAAATTAAAATAAGAATACAAGTTAAATAAAGAAAAGAAAGGCATCTTCTCCCCCAACACAAAGTCCTTAGTTTTTTAAGTAAATTTGTTTACTAAGTGATATGCTGAATCTGATGCCTACTTCAATTCTATATATATATATATATATATAAGTATTCCCATCAATGAAAATTCAGACCATTGGAATTAAATAAAACAGACTGTTCAGATAAAAATAGTGATCAAAAGTAAAATATTATGTTTCTGAGACGAAATTAAATTAACTGTTTCTATAATCTCTGATTTTAATAATCCTAAAACCATTTTTTCAAAACTTAACGAAAACCCCACTTGAGAATCAAGGAAACAAAATATAATACTATATATATATATATATATATAGGGGTATTTTAAAAAAAATAGCAAAATATTGAAAAACTTATAAATCCATACATTTCTATAGTTGTTGGTTTTAAGTTTTTTTTTTAAAACGTAACTACTCCTTTTGTTTTTTACTTTTTCTAAAGTTTGACTTTGAATTTTGAAAAATATGTTTTGTATGCAGACAAAAAAAAAAAAAAATACAAAGACCCAAATAGGGTAGGCATTTGTTCATCAAAACTTAGTTTAATTTTGGAAATACTTTTAGAAGTACACATAAAACACAAATTAAGAAGGTTGATAAGTACATTTTAAAATATATATATATGTATATCTAAATAATTATCCGAGAATCTCATGACAATTTTAATTTATTTTAGGTTTTTGTATGTTTTTCTTTAACGAACAAAAATATAGATACATTCCATTCATGTTTTTGGTTTTATATATGTAGGAAGCAAAAGAGGAGATCATCAGGCTGAAACAAGAAATTGAAGTCCTAAAGGGTCTCAGGTTAAATACATAA

mRNA sequence

ATGGCTCGTGGGAAAGTTCAAATGAAAAGGATTGAGAATCCAGTGCATAGACAAGTTACTTTCTGCAAGCGTCGAGCTGGGCTCCTCAAGAAGGCTAAGGAGCTCTCTGTGCTTTGCGATGCTGAAATTGGACTCTTCATTTTCTCCGCTCATGGAAAGCTCTATGAACTCGCCACTAAAGGAACCATGCAAGGGCTTATTGAAAGGTACATGAAGCACACCAATGGGAATCAGCCACCAGACCCACCAATTCATCACCAAACTTCGGAAGCAAAAGAGGAGATCATCAGGCTGAAACAAGAAATTGAAGTCCTAAAGGGTCTCAGGTTAAATACATAA

Coding sequence (CDS)

ATGGCTCGTGGGAAAGTTCAAATGAAAAGGATTGAGAATCCAGTGCATAGACAAGTTACTTTCTGCAAGCGTCGAGCTGGGCTCCTCAAGAAGGCTAAGGAGCTCTCTGTGCTTTGCGATGCTGAAATTGGACTCTTCATTTTCTCCGCTCATGGAAAGCTCTATGAACTCGCCACTAAAGGAACCATGCAAGGGCTTATTGAAAGGTACATGAAGCACACCAATGGGAATCAGCCACCAGACCCACCAATTCATCACCAAACTTCGGAAGCAAAAGAGGAGATCATCAGGCTGAAACAAGAAATTGAAGTCCTAAAGGGTCTCAGGTTAAATACATAA

Protein sequence

MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATKGTMQGLIERYMKHTNGNQPPDPPIHHQTSEAKEEIIRLKQEIEVLKGLRLNT

Homology

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BLAST of MELO3C022205 vs. NCBI nr
Match: XP_016902413.1 (PREDICTED: agamous-like MADS-box protein AGL12 [Cucumis melo])

HSP 1 Score: 220.7 bits (561), Expect = 6.3e-54
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60
           MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK
Sbjct: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTSEAKEEIIRLKQEIEVLKGLR 110
           GTMQGLIERYMKHTNGNQPPDPPIHHQTSEAKEEIIRLKQEIEVLKGLR
Sbjct: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTSEAKEEIIRLKQEIEVLKGLR 109

[Close]

BLAST of MELO3C022205 vs. NCBI nr
Match: KAA0039245.1 (agamous-like MADS-box protein AGL12 [Cucumis melo var. makuwa])

HSP 1 Score: 219.2 bits (557), Expect = 1.8e-53
Identity = 108/109 (99.08%), Postives = 108/109 (99.08%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60
           MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK
Sbjct: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTSEAKEEIIRLKQEIEVLKGLR 110
           GTMQGLIERYMKHTNGNQPPDPPIHHQTSE KEEIIRLKQEIEVLKGLR
Sbjct: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTSEVKEEIIRLKQEIEVLKGLR 109

[Close]

BLAST of MELO3C022205 vs. NCBI nr
Match: XP_011656111.1 (agamous-like MADS-box protein AGL12 [Cucumis sativus] >KGN52697.1 hypothetical protein Csa_008811 [Cucumis sativus])

HSP 1 Score: 216.9 bits (551), Expect = 9.2e-53
Identity = 107/109 (98.17%), Postives = 107/109 (98.17%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60
           MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK
Sbjct: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTSEAKEEIIRLKQEIEVLKGLR 110
           GTMQGLIERYMKHTNGNQPPDPPIHHQT E KEEIIRLKQEIEVLKGLR
Sbjct: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTLEVKEEIIRLKQEIEVLKGLR 109

[Close]

BLAST of MELO3C022205 vs. NCBI nr
Match: XP_038891170.1 (agamous-like MADS-box protein AGL12 [Benincasa hispida])

HSP 1 Score: 212.2 bits (539), Expect = 2.3e-51
Identity = 105/109 (96.33%), Postives = 106/109 (97.25%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60
           MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIG+FIFSAHGKLYELATK
Sbjct: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTSEAKEEIIRLKQEIEVLKGLR 110
           GTMQGLIERYMKHTNGNQPPDPPI HQT E KEEIIRLKQEIEVLKGLR
Sbjct: 61  GTMQGLIERYMKHTNGNQPPDPPIDHQTLEVKEEIIRLKQEIEVLKGLR 109

[Close]

BLAST of MELO3C022205 vs. NCBI nr
Match: XP_022925494.1 (agamous-like MADS-box protein AGL12 [Cucurbita moschata] >XP_023536341.1 agamous-like MADS-box protein AGL12 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199.9 bits (507), Expect = 1.2e-47
Identity = 98/109 (89.91%), Postives = 104/109 (95.41%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60
           MARGKVQ+KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIG+FIFSAHGKLYELATK
Sbjct: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTSEAKEEIIRLKQEIEVLKGLR 110
           GTMQGLIERYM HTNG+QPP+PPI +QT E KEE+ RLKQEIEVLKGLR
Sbjct: 61  GTMQGLIERYMNHTNGSQPPEPPIDNQTLEVKEEVNRLKQEIEVLKGLR 109

[Close]

BLAST of MELO3C022205 vs. ExPASy Swiss-Prot
Match: Q38841 (Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana OX=3702 GN=AGL12 PE=1 SV=2)

HSP 1 Score: 138.3 bits (347), Expect = 5.4e-32
Identity = 72/113 (63.72%), Postives = 86/113 (76.11%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60
           MARGK+Q+KRIENPVHRQVTFCKRR GLLKKAKELSVLCDAEIG+ IFS  GKL+ELATK
Sbjct: 1   MARGKIQLKRIENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATK 60

Query: 61  GTMQGLIERYMKHTNGNQ-------PPDPPIHHQTSEAKEEIIRLKQEIEVLK 107
           GTM+G+I++YMK T G +            +     + K+EI  LKQEIE+L+
Sbjct: 61  GTMEGMIDKYMKCTGGGRGSSSATFTAQEQLQPPNLDPKDEINVLKQEIEMLQ 113

[Close]

BLAST of MELO3C022205 vs. ExPASy Swiss-Prot
Match: A2YQK9 (MADS-box transcription factor 26 OS=Oryza sativa subsp. indica OX=39946 GN=MADS26 PE=2 SV=2)

HSP 1 Score: 136.0 bits (341), Expect = 2.7e-31
Identity = 74/110 (67.27%), Postives = 88/110 (80.00%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60
           MARGKVQ++RIENPVHRQVTFCKRRAGLLKKA+ELS+LC+A+IG+ IFSAHGKLY+LAT 
Sbjct: 1   MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTSEAKEEIIRLKQEIEVL-KGLR 110
           GTM+ LIERY K  +G Q        Q  + K+E + LKQEI +L KGLR
Sbjct: 61  GTMEELIERY-KSASGEQA--NACGDQRMDPKQEAMVLKQEINLLQKGLR 107

[Close]

BLAST of MELO3C022205 vs. ExPASy Swiss-Prot
Match: Q0J8G8 (MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS26 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.7e-31
Identity = 74/110 (67.27%), Postives = 88/110 (80.00%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60
           MARGKVQ++RIENPVHRQVTFCKRRAGLLKKA+ELS+LC+A+IG+ IFSAHGKLY+LAT 
Sbjct: 1   MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTSEAKEEIIRLKQEIEVL-KGLR 110
           GTM+ LIERY K  +G Q        Q  + K+E + LKQEI +L KGLR
Sbjct: 61  GTMEELIERY-KSASGEQA--NACGDQRMDPKQEAMVLKQEINLLQKGLR 107

[Close]

BLAST of MELO3C022205 vs. ExPASy Swiss-Prot
Match: Q2QW55 (MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS33 PE=2 SV=2)

HSP 1 Score: 129.0 bits (323), Expect = 3.3e-29
Identity = 66/110 (60.00%), Postives = 84/110 (76.36%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60
           M RGKVQM+RIENPVHRQVTFCKRR GLLKKA+ELSVLCDA++G+ IFS+ GKL+ELAT 
Sbjct: 1   MVRGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATN 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTSEAKEEIIRLKQEIEVL-KGLR 110
           G M  L+ERY  +  G Q  +P    +   A++ I  L++EI++L +GLR
Sbjct: 61  GNMHNLVERYQSNVAGGQ-MEPGALQRQQVAEQGIFLLREEIDLLQRGLR 109

[Close]

BLAST of MELO3C022205 vs. ExPASy Swiss-Prot
Match: O22328 (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii OX=4109 GN=SCM1 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 7.9e-23
Identity = 55/106 (51.89%), Postives = 73/106 (68.87%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60
           M RG+VQ+KRIEN ++RQVTF KRR+GLLKKA E+SVLCDAE+GL +FS  GKL+E AT 
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYATD 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTSEAKEEIIRLKQEIEVLK 107
             M+ L+ERY +++   +   P  H        E  +LK  +EVL+
Sbjct: 61  SCMERLLERYERYSFAEKQLVPTDHTSPGSWTLENAKLKARLEVLQ 106

[Close]

BLAST of MELO3C022205 vs. ExPASy TrEMBL
Match: A0A1S4E2G4 (agamous-like MADS-box protein AGL12 OS=Cucumis melo OX=3656 GN=LOC103498765 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.1e-54
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60
           MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK
Sbjct: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTSEAKEEIIRLKQEIEVLKGLR 110
           GTMQGLIERYMKHTNGNQPPDPPIHHQTSEAKEEIIRLKQEIEVLKGLR
Sbjct: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTSEAKEEIIRLKQEIEVLKGLR 109

[Close]

BLAST of MELO3C022205 vs. ExPASy TrEMBL
Match: A0A5A7TCW0 (Agamous-like MADS-box protein AGL12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G00340 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 8.9e-54
Identity = 108/109 (99.08%), Postives = 108/109 (99.08%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60
           MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK
Sbjct: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTSEAKEEIIRLKQEIEVLKGLR 110
           GTMQGLIERYMKHTNGNQPPDPPIHHQTSE KEEIIRLKQEIEVLKGLR
Sbjct: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTSEVKEEIIRLKQEIEVLKGLR 109

[Close]

BLAST of MELO3C022205 vs. ExPASy TrEMBL
Match: A0A0A0KW77 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G650620 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 4.4e-53
Identity = 107/109 (98.17%), Postives = 107/109 (98.17%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60
           MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK
Sbjct: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTSEAKEEIIRLKQEIEVLKGLR 110
           GTMQGLIERYMKHTNGNQPPDPPIHHQT E KEEIIRLKQEIEVLKGLR
Sbjct: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTLEVKEEIIRLKQEIEVLKGLR 109

[Close]

BLAST of MELO3C022205 vs. ExPASy TrEMBL
Match: A0A6J1ECC1 (agamous-like MADS-box protein AGL12 OS=Cucurbita moschata OX=3662 GN=LOC111432780 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 5.6e-48
Identity = 98/109 (89.91%), Postives = 104/109 (95.41%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60
           MARGKVQ+KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIG+FIFSAHGKLYELATK
Sbjct: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTSEAKEEIIRLKQEIEVLKGLR 110
           GTMQGLIERYM HTNG+QPP+PPI +QT E KEE+ RLKQEIEVLKGLR
Sbjct: 61  GTMQGLIERYMNHTNGSQPPEPPIDNQTLEVKEEVNRLKQEIEVLKGLR 109

[Close]

BLAST of MELO3C022205 vs. ExPASy TrEMBL
Match: A0A6J1IA69 (agamous-like MADS-box protein AGL12 OS=Cucurbita maxima OX=3661 GN=LOC111472603 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 6.2e-47
Identity = 97/109 (88.99%), Postives = 103/109 (94.50%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60
           MARGKVQ+KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIG+FIFSAHGKLYELATK
Sbjct: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTSEAKEEIIRLKQEIEVLKGLR 110
           GTMQGLIERYM HTNG+QPP+P I +QT E KEE+ RLKQEIEVLKGLR
Sbjct: 61  GTMQGLIERYMNHTNGSQPPEPRIDNQTLEVKEEVNRLKQEIEVLKGLR 109

[Close]

BLAST of MELO3C022205 vs. TAIR 10
Match: AT1G71692.1 (AGAMOUS-like 12 )

HSP 1 Score: 138.3 bits (347), Expect = 3.9e-33
Identity = 72/113 (63.72%), Postives = 86/113 (76.11%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60
           MARGK+Q+KRIENPVHRQVTFCKRR GLLKKAKELSVLCDAEIG+ IFS  GKL+ELATK
Sbjct: 1   MARGKIQLKRIENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATK 60

Query: 61  GTMQGLIERYMKHTNGNQ-------PPDPPIHHQTSEAKEEIIRLKQEIEVLK 107
           GTM+G+I++YMK T G +            +     + K+EI  LKQEIE+L+
Sbjct: 61  GTMEGMIDKYMKCTGGGRGSSSATFTAQEQLQPPNLDPKDEINVLKQEIEMLQ 113

[Close]

BLAST of MELO3C022205 vs. TAIR 10
Match: AT1G24260.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 105.5 bits (262), Expect = 2.8e-23
Identity = 55/113 (48.67%), Postives = 75/113 (66.37%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60
           M RG+V++KRIEN ++RQVTF KRR GLLKKA ELSVLCDAE+ L IFS  GKLYE  + 
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTSE--AKEEIIRLKQEIEVLKGLRLN 112
            +M   +ERY K   G   P+ P     +E  +++E ++LK+  + L+  + N
Sbjct: 61  SSMLRTLERYQKCNYGAPEPNVPSREALAELSSQQEYLKLKERYDALQRTQRN 113

[Close]

BLAST of MELO3C022205 vs. TAIR 10
Match: AT1G24260.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 103.2 bits (256), Expect = 1.4e-22
Identity = 54/114 (47.37%), Postives = 74/114 (64.91%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60
           M RG+V++KRIEN ++RQVTF KRR GLLKKA ELSVLCDAE+ L IFS  GKLYE  + 
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTS---EAKEEIIRLKQEIEVLKGLRLN 112
            +M   +ERY K   G   P+ P     +    +++E ++LK+  + L+  + N
Sbjct: 61  SSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRN 114

[Close]

BLAST of MELO3C022205 vs. TAIR 10
Match: AT1G24260.3 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 103.2 bits (256), Expect = 1.4e-22
Identity = 54/114 (47.37%), Postives = 74/114 (64.91%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60
           M RG+V++KRIEN ++RQVTF KRR GLLKKA ELSVLCDAE+ L IFS  GKLYE  + 
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTS---EAKEEIIRLKQEIEVLKGLRLN 112
            +M   +ERY K   G   P+ P     +    +++E ++LK+  + L+  + N
Sbjct: 61  SSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRN 114

[Close]

BLAST of MELO3C022205 vs. TAIR 10
Match: AT2G45660.1 (AGAMOUS-like 20 )

HSP 1 Score: 103.2 bits (256), Expect = 1.4e-22
Identity = 57/106 (53.77%), Postives = 66/106 (62.26%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60
           M RGK QMKRIEN   RQVTF KRR GLLKKA ELSVLCDAE+ L IFS  GKLYE A+ 
Sbjct: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFAS- 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTSEAKEEIIRLKQEIEVLK 107
             MQ  I+RY++HT       P         K E   + ++IE L+
Sbjct: 61  SNMQDTIDRYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLE 105

The following BLAST results are available for this feature:

BLAST of MELO3C022205 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902413.1	6.3e-54	100.00	PREDICTED: agamous-like MADS-box protein AGL12 [Cucumis melo]	[more]
KAA0039245.1	1.8e-53	99.08	agamous-like MADS-box protein AGL12 [Cucumis melo var. makuwa]	[more]
XP_011656111.1	9.2e-53	98.17	agamous-like MADS-box protein AGL12 [Cucumis sativus] >KGN52697.1 hypothetical p...	[more]
XP_038891170.1	2.3e-51	96.33	agamous-like MADS-box protein AGL12 [Benincasa hispida]	[more]
XP_022925494.1	1.2e-47	89.91	agamous-like MADS-box protein AGL12 [Cucurbita moschata] >XP_023536341.1 agamous...	[more]

BLAST of MELO3C022205 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38841	5.4e-32	63.72	Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana OX=3702 GN=AGL12 PE=...	[more]
A2YQK9	2.7e-31	67.27	MADS-box transcription factor 26 OS=Oryza sativa subsp. indica OX=39946 GN=MADS2...	[more]
Q0J8G8	2.7e-31	67.27	MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD...	[more]
Q2QW55	3.3e-29	60.00	MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD...	[more]
O22328	7.9e-23	51.89	Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii OX=4109 GN=SCM...	[more]

BLAST of MELO3C022205 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E2G4	3.1e-54	100.00	agamous-like MADS-box protein AGL12 OS=Cucumis melo OX=3656 GN=LOC103498765 PE=4...	[more]
A0A5A7TCW0	8.9e-54	99.08	Agamous-like MADS-box protein AGL12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A0A0KW77	4.4e-53	98.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G650620 PE=4 SV=1	[more]
A0A6J1ECC1	5.6e-48	89.91	agamous-like MADS-box protein AGL12 OS=Cucurbita moschata OX=3662 GN=LOC11143278...	[more]
A0A6J1IA69	6.2e-47	88.99	agamous-like MADS-box protein AGL12 OS=Cucurbita maxima OX=3661 GN=LOC111472603 ...	[more]

BLAST of MELO3C022205 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71692.1	3.9e-33	63.72	AGAMOUS-like 12	[more]
AT1G24260.1	2.8e-23	48.67	K-box region and MADS-box transcription factor family protein	[more]
AT1G24260.2	1.4e-22	47.37	K-box region and MADS-box transcription factor family protein	[more]
AT1G24260.3	1.4e-22	47.37	K-box region and MADS-box transcription factor family protein	[more]
AT2G45660.1	1.4e-22	53.77	AGAMOUS-like 20	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 88..108
None	No IPR available	PANTHER	PTHR48019:SF45	AGAMOUS-LIKE MADS-BOX PROTEIN AGL12	coord: 1..109
None	No IPR available	PANTHER	PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	coord: 1..109
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 3..23 score: 63.09 coord: 23..38 score: 80.42 coord: 38..59 score: 53.46
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 1.9E-35 score: 133.8
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..56 e-value: 9.9E-23 score: 79.4
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 29.786491
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 15..78 e-value: 3.1E-25 score: 89.7
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 1..76
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 2..76 e-value: 1.06946E-41 score: 130.365

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C022205.1	MELO3C022205.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding