MELO3C022163.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C022163.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionPre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1
Locationchr09: 608171 .. 608696 (+)
RNA-Seq ExpressionMELO3C022163.jh1
SyntenyMELO3C022163.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGAGTTTCCTCTTGATCCCATGCTTTCTAAGATGATGGTTGCTTCTGAAAAATTCAAATGTTCGGATGAGATTATTTCTATTGCAGCTATGCTTTCTATTGGAAATTCTATCTTTTATCGTCCGAAGGATAAACAAGTTCATGTTGACAATGCCCGAATGGATTTTCACACTGGGAATGTGGGGGATCACATAGCACTGTTGAAGGTCTACAACTCTTGGAGGGAAACAAATTACTCTACGCAATGGTGCCGCGAGAATTACATCCAGGTCAGAAGTATGAAGCGTGCCAGAGATATCAGATATCAACTTGAAGGGCTTTTAGAAAAGTTTGAAATCAAATTAACTTCAAATTTGAATGACTTGGATGCAATAAAGAAGACCATAATAGCTCGATTTTTTCCTCACTCTGCAAAGTTACAAAGGAATGGCTCTTATCGGACAATTAAACATCCACAGACTGTTCATATACATCCTAGCTCAGGTTGGCTCAGGTTCTTCCAAGATGGGTTGTATACCATGA

mRNA sequence

ATGGCAGAGTTTCCTCTTGATCCCATGCTTTCTAAGATGATGGTTGCTTCTGAAAAATTCAAATGTTCGGATGAGATTATTTCTATTGCAGCTATGCTTTCTATTGGAAATTCTATCTTTTATCGTCCGAAGGATAAACAAGTTCATGTTGACAATGCCCGAATGGATTTTCACACTGGGAATGTGGGGGATCACATAGCACTGTTGAAGGTCTACAACTCTTGGAGGGAAACAAATTACTCTACGCAATGGTGCCGCGAGAATTACATCCAGGTCAGAAGTATGAAGCGTGCCAGAGATATCAGATATCAACTTGAAGGGCTTTTAGAAAAGTTTGAAATCAAATTAACTTCAAATTTGAATGACTTGGATGCAATAAAGAAGACCATAATAGCTCGATTTTTTCCTCACTCTGCAAAGTTACAAAGGAATGGCTCTTATCGGACAATTAAACATCCACAGACTGTTCATATACATCCTAGCTCAGGTTGGCTCAGGTTCTTCCAAGATGGGTTGTATACCATGA

Coding sequence (CDS)

ATGGCAGAGTTTCCTCTTGATCCCATGCTTTCTAAGATGATGGTTGCTTCTGAAAAATTCAAATGTTCGGATGAGATTATTTCTATTGCAGCTATGCTTTCTATTGGAAATTCTATCTTTTATCGTCCGAAGGATAAACAAGTTCATGTTGACAATGCCCGAATGGATTTTCACACTGGGAATGTGGGGGATCACATAGCACTGTTGAAGGTCTACAACTCTTGGAGGGAAACAAATTACTCTACGCAATGGTGCCGCGAGAATTACATCCAGGTCAGAAGTATGAAGCGTGCCAGAGATATCAGATATCAACTTGAAGGGCTTTTAGAAAAGTTTGAAATCAAATTAACTTCAAATTTGAATGACTTGGATGCAATAAAGAAGACCATAATAGCTCGATTTTTTCCTCACTCTGCAAAGTTACAAAGGAATGGCTCTTATCGGACAATTAAACATCCACAGACTGTTCATATACATCCTAGCTCAGGTTGGCTCAGGTTCTTCCAAGATGGGTTGTATACCATG

Protein sequence

MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARDIRYQLEGLLEKFEIKLTSNLNDLDAIKKTIIARFFPHSAKLQRNGSYRTIKHPQTVHIHPSSGWLRFFQDGLYTM
Homology
BLAST of MELO3C022163.jh1 vs. NCBI nr
Match: KAA0039296.1 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Cucumis melo var. makuwa] >TYK00480.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Cucumis melo var. makuwa])

HSP 1 Score: 330 bits (845), Expect = 2.46e-111
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0

Query: 1   MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTG 60
           MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTG
Sbjct: 124 MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTG 183

Query: 61  NVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARDIRYQLEGLLEKFEIKLTSNL 120
           NVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARDIRYQLEGLLEKFEIKLTSNL
Sbjct: 184 NVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARDIRYQLEGLLEKFEIKLTSNL 243

Query: 121 NDLDAIKKTIIARFFPHSAKLQRNGSYRTIKHPQTVHIHPSS 162
           NDLDAIKKTIIARFFPHSAKLQRNGSYRTIKHPQTVHIHPSS
Sbjct: 244 NDLDAIKKTIIARFFPHSAKLQRNGSYRTIKHPQTVHIHPSS 285

BLAST of MELO3C022163.jh1 vs. NCBI nr
Match: XP_023529500.1 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 309 bits (791), Expect = 1.43e-98
Identity = 152/163 (93.25%), Postives = 157/163 (96.32%), Query Frame = 0

Query: 1   MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTG 60
           MAEFPLDPMLSKMMVASEK KCSDEIISIAAMLSIGNSIFYRPKDKQVH DNARM+FHTG
Sbjct: 464 MAEFPLDPMLSKMMVASEKHKCSDEIISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTG 523

Query: 61  NVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARDIRYQLEGLLEKFEIKLTSNL 120
           NVGDHIALLKVYNSWRETNYSTQWC ENYIQVRSMKRARDIR QLEGLLE+ EI+LTSNL
Sbjct: 524 NVGDHIALLKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNL 583

Query: 121 NDLDAIKKTIIARFFPHSAKLQRNGSYRTIKHPQTVHIHPSSG 163
           NDLDAIKKTII+ FFPHSAKLQ+NGSYRTIKHPQTVHIHPSSG
Sbjct: 584 NDLDAIKKTIISGFFPHSAKLQKNGSYRTIKHPQTVHIHPSSG 626

BLAST of MELO3C022163.jh1 vs. NCBI nr
Match: XP_022933604.1 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X2 [Cucurbita moschata])

HSP 1 Score: 309 bits (791), Expect = 1.43e-98
Identity = 152/163 (93.25%), Postives = 157/163 (96.32%), Query Frame = 0

Query: 1   MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTG 60
           MAEFPLDPMLSKMMVASEK KCSDEIISIAAMLSIGNSIFYRPKDKQVH DNARM+FHTG
Sbjct: 464 MAEFPLDPMLSKMMVASEKHKCSDEIISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTG 523

Query: 61  NVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARDIRYQLEGLLEKFEIKLTSNL 120
           NVGDHIALLKVYNSWRETNYSTQWC ENYIQVRSMKRARDIR QLEGLLE+ EI+LTSNL
Sbjct: 524 NVGDHIALLKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNL 583

Query: 121 NDLDAIKKTIIARFFPHSAKLQRNGSYRTIKHPQTVHIHPSSG 163
           NDLDAIKKTII+ FFPHSAKLQ+NGSYRTIKHPQTVHIHPSSG
Sbjct: 584 NDLDAIKKTIISGFFPHSAKLQKNGSYRTIKHPQTVHIHPSSG 626

BLAST of MELO3C022163.jh1 vs. NCBI nr
Match: XP_023005022.1 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X2 [Cucurbita maxima])

HSP 1 Score: 309 bits (791), Expect = 1.43e-98
Identity = 152/163 (93.25%), Postives = 157/163 (96.32%), Query Frame = 0

Query: 1   MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTG 60
           MAEFPLDPMLSKMMVASEK KCSDEIISIAAMLSIGNSIFYRPKDKQVH DNARM+FHTG
Sbjct: 464 MAEFPLDPMLSKMMVASEKHKCSDEIISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTG 523

Query: 61  NVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARDIRYQLEGLLEKFEIKLTSNL 120
           NVGDHIALLKVYNSWRETNYSTQWC ENYIQVRSMKRARDIR QLEGLLE+ EI+LTSNL
Sbjct: 524 NVGDHIALLKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNL 583

Query: 121 NDLDAIKKTIIARFFPHSAKLQRNGSYRTIKHPQTVHIHPSSG 163
           NDLDAIKKTII+ FFPHSAKLQ+NGSYRTIKHPQTVHIHPSSG
Sbjct: 584 NDLDAIKKTIISGFFPHSAKLQKNGSYRTIKHPQTVHIHPSSG 626

BLAST of MELO3C022163.jh1 vs. NCBI nr
Match: XP_022134868.1 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X2 [Momordica charantia])

HSP 1 Score: 308 bits (790), Expect = 2.27e-98
Identity = 150/163 (92.02%), Postives = 157/163 (96.32%), Query Frame = 0

Query: 1   MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTG 60
           MAEFPLDPMLSKMMVASEKFKCSDE+ISIAAMLSIGNSIFYRPKDKQVH DNARM+FHTG
Sbjct: 464 MAEFPLDPMLSKMMVASEKFKCSDEVISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTG 523

Query: 61  NVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARDIRYQLEGLLEKFEIKLTSNL 120
           NVGDHIALLKVYNSWRETNYSTQWC ENYIQVRSMKRARDIR QLEGLLE+ EI+LTSNL
Sbjct: 524 NVGDHIALLKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNL 583

Query: 121 NDLDAIKKTIIARFFPHSAKLQRNGSYRTIKHPQTVHIHPSSG 163
           NDLDAIKKTII+ +FPHS KLQ+NGSYRTIKHPQTVHIHPSSG
Sbjct: 584 NDLDAIKKTIISGYFPHSGKLQKNGSYRTIKHPQTVHIHPSSG 626

BLAST of MELO3C022163.jh1 vs. ExPASy Swiss-Prot
Match: Q8VY00 (Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Arabidopsis thaliana OX=3702 GN=ESP3 PE=1 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.3e-77
Identity = 135/163 (82.82%), Postives = 155/163 (95.09%), Query Frame = 0

Query: 1   MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTG 60
           MAEFPLDPMLSKM+V S+K+KCSDEIISIAAMLSIG SIFYRPKDKQVH DNARM+FHTG
Sbjct: 819 MAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTG 878

Query: 61  NVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARDIRYQLEGLLEKFEIKLTSNL 120
           NVGDHIALLKVY+SW+ETN+STQWC ENYIQVRSMKRARDIR QLEGLLE+ EI ++SNL
Sbjct: 879 NVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDISSNL 938

Query: 121 NDLDAIKKTIIARFFPHSAKLQRNGSYRTIKHPQTVHIHPSSG 164
           N+LD+++K+I+A FFPH+AKLQ+NGSYRT+KHPQTVHIHP+SG
Sbjct: 939 NELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPNSG 981

BLAST of MELO3C022163.jh1 vs. ExPASy Swiss-Prot
Match: F4IJV4 (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH6 OS=Arabidopsis thaliana OX=3702 GN=MEE29 PE=2 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 2.8e-75
Identity = 132/163 (80.98%), Postives = 150/163 (92.02%), Query Frame = 0

Query: 1   MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTG 60
           MAEFPLDPMLSKM+V S+K+KCSDEIISIAAMLSIG SIFYRPKDKQVH DNA  +FH G
Sbjct: 819 MAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPSIFYRPKDKQVHADNAMKNFHVG 878

Query: 61  NVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARDIRYQLEGLLEKFEIKLTSNL 120
           NVGDHIA LK+YNSW+ETNYSTQWC ENYIQVRSMKRARDIR QLEGLLE+ EI ++SN 
Sbjct: 879 NVGDHIAFLKIYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDVSSNA 938

Query: 121 NDLDAIKKTIIARFFPHSAKLQRNGSYRTIKHPQTVHIHPSSG 164
           N+LD+I+K+I+A FFPH+AKLQ+NGSYRT+KHPQTVHIHP+SG
Sbjct: 939 NELDSIRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPASG 981

BLAST of MELO3C022163.jh1 vs. ExPASy Swiss-Prot
Match: F4JMJ3 (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH8 OS=Arabidopsis thaliana OX=3702 GN=At4g16680 PE=2 SV=2)

HSP 1 Score: 251.5 bits (641), Expect = 6.9e-66
Identity = 121/165 (73.33%), Postives = 142/165 (86.06%), Query Frame = 0

Query: 1   MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFH-- 60
           M EFP+DPMLSKM+V SEK+KCS EII+IAAMLS+GNS+FYRPK++QV  D ARMDF+  
Sbjct: 633 MVEFPVDPMLSKMIVGSEKYKCSKEIITIAAMLSVGNSVFYRPKNQQVFADKARMDFYED 692

Query: 61  TGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARDIRYQLEGLLEKFEIKLTS 120
           T NVGDHIALL+VYNSW+E NYSTQWC E +IQ +SMKRARDIR QL GLL K  ++LTS
Sbjct: 693 TENVGDHIALLRVYNSWKEENYSTQWCCEKFIQSKSMKRARDIRDQLLGLLNKIGVELTS 752

Query: 121 NLNDLDAIKKTIIARFFPHSAKLQRNGSYRTIKHPQTVHIHPSSG 164
           N NDLDAIKK I+A FFPHSAKLQ+NGSYR +K PQTV++HP+SG
Sbjct: 753 NPNDLDAIKKAILAGFFPHSAKLQKNGSYRRVKEPQTVYVHPNSG 797

BLAST of MELO3C022163.jh1 vs. ExPASy Swiss-Prot
Match: Q54MH3 (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Dictyostelium discoideum OX=44689 GN=dhx16 PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.7e-51
Identity = 99/163 (60.74%), Postives = 129/163 (79.14%), Query Frame = 0

Query: 1    MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNAR-MDFHT 60
            MAEFP+DP LSKM++ASEK+KCS+EI++I AMLS+GN+IFYRPKDK    D AR + FH 
Sbjct: 882  MAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVGNTIFYRPKDKAFAADAARKLFFHP 941

Query: 61   GNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARDIRYQLEGLLEKFEIKLTSN 120
               GDH+ L+ V+N WRE+ Y+ QWC EN+IQ RSMKRA+D+R QLE LLE+ EI L SN
Sbjct: 942  --QGDHLTLMNVFNQWRESGYAVQWCFENFIQHRSMKRAQDVRDQLELLLERVEIPLVSN 1001

Query: 121  LNDLDAIKKTIIARFFPHSAKLQRNGSYRTIKHPQTVHIHPSS 163
            ++D D+I+K I + FF +SAKL+++G +RT KH Q+V IHPSS
Sbjct: 1002 VDDTDSIRKCIASGFFYNSAKLEKSGLFRTTKHNQSVQIHPSS 1042

BLAST of MELO3C022163.jh1 vs. ExPASy Swiss-Prot
Match: O60231 (Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Homo sapiens OX=9606 GN=DHX16 PE=1 SV=2)

HSP 1 Score: 202.6 bits (514), Expect = 3.7e-51
Identity = 97/162 (59.88%), Postives = 126/162 (77.78%), Query Frame = 0

Query: 1   MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTG 60
           MAE P+DPMLSKM++ASEK+ CS+EI+++AAMLS+ NSIFYRPKDK VH DNAR++F   
Sbjct: 815 MAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLP 874

Query: 61  NVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARDIRYQLEGLLEKFEIKLTSNL 120
             GDH+ LL VY  W E+ YS+QWC EN++Q RSM+RARD+R QLEGLLE+ E+ L+S  
Sbjct: 875 G-GDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQ 934

Query: 121 NDLDAIKKTIIARFFPHSAKLQRNGSYRTIKHPQTVHIHPSS 163
            D   ++K I A +F H+A+L R+G YRT+K  QTV IHP+S
Sbjct: 935 GDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNS 974

BLAST of MELO3C022163.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TB84 (Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00880 PE=4 SV=1)

HSP 1 Score: 330 bits (845), Expect = 1.19e-111
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0

Query: 1   MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTG 60
           MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTG
Sbjct: 124 MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTG 183

Query: 61  NVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARDIRYQLEGLLEKFEIKLTSNL 120
           NVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARDIRYQLEGLLEKFEIKLTSNL
Sbjct: 184 NVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARDIRYQLEGLLEKFEIKLTSNL 243

Query: 121 NDLDAIKKTIIARFFPHSAKLQRNGSYRTIKHPQTVHIHPSS 162
           NDLDAIKKTIIARFFPHSAKLQRNGSYRTIKHPQTVHIHPSS
Sbjct: 244 NDLDAIKKTIIARFFPHSAKLQRNGSYRTIKHPQTVHIHPSS 285

BLAST of MELO3C022163.jh1 vs. ExPASy TrEMBL
Match: A0A6J1KS15 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498124 PE=4 SV=1)

HSP 1 Score: 309 bits (791), Expect = 6.92e-99
Identity = 152/163 (93.25%), Postives = 157/163 (96.32%), Query Frame = 0

Query: 1   MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTG 60
           MAEFPLDPMLSKMMVASEK KCSDEIISIAAMLSIGNSIFYRPKDKQVH DNARM+FHTG
Sbjct: 464 MAEFPLDPMLSKMMVASEKHKCSDEIISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTG 523

Query: 61  NVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARDIRYQLEGLLEKFEIKLTSNL 120
           NVGDHIALLKVYNSWRETNYSTQWC ENYIQVRSMKRARDIR QLEGLLE+ EI+LTSNL
Sbjct: 524 NVGDHIALLKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNL 583

Query: 121 NDLDAIKKTIIARFFPHSAKLQRNGSYRTIKHPQTVHIHPSSG 163
           NDLDAIKKTII+ FFPHSAKLQ+NGSYRTIKHPQTVHIHPSSG
Sbjct: 584 NDLDAIKKTIISGFFPHSAKLQKNGSYRTIKHPQTVHIHPSSG 626

BLAST of MELO3C022163.jh1 vs. ExPASy TrEMBL
Match: A0A6J1F081 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111440982 PE=4 SV=1)

HSP 1 Score: 309 bits (791), Expect = 6.92e-99
Identity = 152/163 (93.25%), Postives = 157/163 (96.32%), Query Frame = 0

Query: 1   MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTG 60
           MAEFPLDPMLSKMMVASEK KCSDEIISIAAMLSIGNSIFYRPKDKQVH DNARM+FHTG
Sbjct: 464 MAEFPLDPMLSKMMVASEKHKCSDEIISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTG 523

Query: 61  NVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARDIRYQLEGLLEKFEIKLTSNL 120
           NVGDHIALLKVYNSWRETNYSTQWC ENYIQVRSMKRARDIR QLEGLLE+ EI+LTSNL
Sbjct: 524 NVGDHIALLKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNL 583

Query: 121 NDLDAIKKTIIARFFPHSAKLQRNGSYRTIKHPQTVHIHPSSG 163
           NDLDAIKKTII+ FFPHSAKLQ+NGSYRTIKHPQTVHIHPSSG
Sbjct: 584 NDLDAIKKTIISGFFPHSAKLQKNGSYRTIKHPQTVHIHPSSG 626

BLAST of MELO3C022163.jh1 vs. ExPASy TrEMBL
Match: A0A6J1C379 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007026 PE=4 SV=1)

HSP 1 Score: 308 bits (790), Expect = 1.10e-98
Identity = 150/163 (92.02%), Postives = 157/163 (96.32%), Query Frame = 0

Query: 1   MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTG 60
           MAEFPLDPMLSKMMVASEKFKCSDE+ISIAAMLSIGNSIFYRPKDKQVH DNARM+FHTG
Sbjct: 464 MAEFPLDPMLSKMMVASEKFKCSDEVISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTG 523

Query: 61  NVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARDIRYQLEGLLEKFEIKLTSNL 120
           NVGDHIALLKVYNSWRETNYSTQWC ENYIQVRSMKRARDIR QLEGLLE+ EI+LTSNL
Sbjct: 524 NVGDHIALLKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNL 583

Query: 121 NDLDAIKKTIIARFFPHSAKLQRNGSYRTIKHPQTVHIHPSSG 163
           NDLDAIKKTII+ +FPHS KLQ+NGSYRTIKHPQTVHIHPSSG
Sbjct: 584 NDLDAIKKTIISGYFPHSGKLQKNGSYRTIKHPQTVHIHPSSG 626

BLAST of MELO3C022163.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LUM2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G012660 PE=4 SV=1)

HSP 1 Score: 310 bits (794), Expect = 2.40e-96
Identity = 151/163 (92.64%), Postives = 158/163 (96.93%), Query Frame = 0

Query: 1   MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTG 60
           MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVH DNARM+FHTG
Sbjct: 824 MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTG 883

Query: 61  NVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARDIRYQLEGLLEKFEIKLTSNL 120
           NVGDHIALLKVYNSWRETNYSTQWC ENYIQVRSMKRARDIR QLEGLLE+ EI+LTSNL
Sbjct: 884 NVGDHIALLKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNL 943

Query: 121 NDLDAIKKTIIARFFPHSAKLQRNGSYRTIKHPQTVHIHPSSG 163
           NDLDAIKKTII+ +FPHSAKLQ+NGSYRT+KHPQTVHIHPSSG
Sbjct: 944 NDLDAIKKTIISGYFPHSAKLQKNGSYRTVKHPQTVHIHPSSG 986

BLAST of MELO3C022163.jh1 vs. TAIR 10
Match: AT1G32490.1 (RNA helicase family protein )

HSP 1 Score: 290.4 bits (742), Expect = 9.5e-79
Identity = 135/163 (82.82%), Postives = 155/163 (95.09%), Query Frame = 0

Query: 1   MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTG 60
           MAEFPLDPMLSKM+V S+K+KCSDEIISIAAMLSIG SIFYRPKDKQVH DNARM+FHTG
Sbjct: 819 MAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTG 878

Query: 61  NVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARDIRYQLEGLLEKFEIKLTSNL 120
           NVGDHIALLKVY+SW+ETN+STQWC ENYIQVRSMKRARDIR QLEGLLE+ EI ++SNL
Sbjct: 879 NVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDISSNL 938

Query: 121 NDLDAIKKTIIARFFPHSAKLQRNGSYRTIKHPQTVHIHPSSG 164
           N+LD+++K+I+A FFPH+AKLQ+NGSYRT+KHPQTVHIHP+SG
Sbjct: 939 NELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPNSG 981

BLAST of MELO3C022163.jh1 vs. TAIR 10
Match: AT1G32490.2 (RNA helicase family protein )

HSP 1 Score: 290.4 bits (742), Expect = 9.5e-79
Identity = 135/163 (82.82%), Postives = 155/163 (95.09%), Query Frame = 0

Query: 1   MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTG 60
           MAEFPLDPMLSKM+V S+K+KCSDEIISIAAMLSIG SIFYRPKDKQVH DNARM+FHTG
Sbjct: 809 MAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTG 868

Query: 61  NVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARDIRYQLEGLLEKFEIKLTSNL 120
           NVGDHIALLKVY+SW+ETN+STQWC ENYIQVRSMKRARDIR QLEGLLE+ EI ++SNL
Sbjct: 869 NVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDISSNL 928

Query: 121 NDLDAIKKTIIARFFPHSAKLQRNGSYRTIKHPQTVHIHPSSG 164
           N+LD+++K+I+A FFPH+AKLQ+NGSYRT+KHPQTVHIHP+SG
Sbjct: 929 NELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPNSG 971

BLAST of MELO3C022163.jh1 vs. TAIR 10
Match: AT2G35340.1 (helicase domain-containing protein )

HSP 1 Score: 282.7 bits (722), Expect = 2.0e-76
Identity = 132/163 (80.98%), Postives = 150/163 (92.02%), Query Frame = 0

Query: 1   MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTG 60
           MAEFPLDPMLSKM+V S+K+KCSDEIISIAAMLSIG SIFYRPKDKQVH DNA  +FH G
Sbjct: 819 MAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPSIFYRPKDKQVHADNAMKNFHVG 878

Query: 61  NVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARDIRYQLEGLLEKFEIKLTSNL 120
           NVGDHIA LK+YNSW+ETNYSTQWC ENYIQVRSMKRARDIR QLEGLLE+ EI ++SN 
Sbjct: 879 NVGDHIAFLKIYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDVSSNA 938

Query: 121 NDLDAIKKTIIARFFPHSAKLQRNGSYRTIKHPQTVHIHPSSG 164
           N+LD+I+K+I+A FFPH+AKLQ+NGSYRT+KHPQTVHIHP+SG
Sbjct: 939 NELDSIRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPASG 981

BLAST of MELO3C022163.jh1 vs. TAIR 10
Match: AT3G26560.1 (ATP-dependent RNA helicase, putative )

HSP 1 Score: 151.4 bits (381), Expect = 6.9e-37
Identity = 75/162 (46.30%), Postives = 106/162 (65.43%), Query Frame = 0

Query: 1    MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTG 60
            MAEFPL+P LSKM++AS    CSDEI+++ AM+  GN IFYRP++KQ   D  R  F   
Sbjct: 930  MAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGN-IFYRPREKQAQADQKRAKFFQP 989

Query: 61   NVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARDIRYQLEGLLEKFEIKLTSNL 120
              GDH+ LL VY +W+  N+S  WC EN+IQ RS++RA+D+R QL  +++K+++ + +  
Sbjct: 990  E-GDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKLDVVTAG 1049

Query: 121  NDLDAIKKTIIARFFPHSAKLQRNGSYRTIKHPQTVHIHPSS 163
             +   I+K I A FF H A+      YRT+   Q V+IHPSS
Sbjct: 1050 KNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSS 1089

BLAST of MELO3C022163.jh1 vs. TAIR 10
Match: AT2G47250.1 (RNA helicase family protein )

HSP 1 Score: 140.2 bits (352), Expect = 1.6e-33
Identity = 71/167 (42.51%), Postives = 111/167 (66.47%), Query Frame = 0

Query: 1   MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTG 60
           M+EFPLDP +SKM++ S +F CS+EI+S++AMLS+ N  F RP++ Q   D A+  F  G
Sbjct: 493 MSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPN-CFVRPREAQKAADEAKARF--G 552

Query: 61  NV-GDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARDIRYQLEGLLEKFEIKLTS- 120
           ++ GDH+ LL VY+++++ N    WC EN++  R+MK A ++R QL  ++ +F +K+ S 
Sbjct: 553 HIDGDHLTLLNVYHAYKQNNEDPNWCFENFVNNRAMKSADNVRQQLVRIMSRFNLKMCST 612

Query: 121 NLNDLD---AIKKTIIARFFPHSAKLQRNGSYRTIKHPQTVHIHPSS 163
           + N  D    I+K ++A +F   A L+R G Y T+K  Q VH+HPS+
Sbjct: 613 DFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSN 656

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0039296.12.46e-111100.00pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Cucumis melo var. mak... [more]
XP_023529500.11.43e-9893.25pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X2 [Cucurbita ... [more]
XP_022933604.11.43e-9893.25pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X2 [Cucurbita ... [more]
XP_023005022.11.43e-9893.25pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X2 [Cucurbita ... [more]
XP_022134868.12.27e-9892.02pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X2 [Momordica ... [more]
Match NameE-valueIdentityDescription
Q8VY001.3e-7782.82Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Arabidopsis thalian... [more]
F4IJV42.8e-7580.98Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH6 OS=Arabidopsi... [more]
F4JMJ36.9e-6673.33Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH8 OS=Arabidopsi... [more]
Q54MH33.7e-5160.74Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Dictyostel... [more]
O602313.7e-5159.88Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Homo sapiens OX=960... [more]
Match NameE-valueIdentityDescription
A0A5A7TB841.19e-111100.00Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Cucumis melo var. m... [more]
A0A6J1KS156.92e-9993.25pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X2 OS=Cucurbit... [more]
A0A6J1F0816.92e-9993.25pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X2 OS=Cucurbit... [more]
A0A6J1C3791.10e-9892.02pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X2 OS=Momordic... [more]
A0A0A0LUM22.40e-9692.64Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G012660 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G32490.19.5e-7982.82RNA helicase family protein [more]
AT1G32490.29.5e-7982.82RNA helicase family protein [more]
AT2G35340.12.0e-7680.98helicase domain-containing protein [more]
AT3G26560.16.9e-3746.30ATP-dependent RNA helicase, putative [more]
AT2G47250.11.6e-3342.51RNA helicase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007502Helicase-associated domainSMARTSM00847ha2_5coord: 1..69
e-value: 6.5E-11
score: 52.3
IPR007502Helicase-associated domainPFAMPF04408HA2coord: 1..52
e-value: 3.7E-12
score: 46.5
NoneNo IPR availableGENE3D1.20.120.1080coord: 1..119
e-value: 1.2E-16
score: 62.5
NoneNo IPR availablePANTHERPTHR18934ATP-DEPENDENT RNA HELICASEcoord: 1..164
NoneNo IPR availablePANTHERPTHR18934:SF215PRE-MRNA-SPLICING FACTOR ATP-DEPENDENT RNA HELICASE DEAH1-LIKEcoord: 1..164
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..111

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C022163.jh1.t1MELO3C022163.jh1.t1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004386 helicase activity