MELO3C022033 (gene) Melon (DHL92) v4

Overview
NameMELO3C022033
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionDNA-directed RNA polymerase II subunit RPB1-like
Locationchr09: 1686011 .. 1687628 (-)
RNA-Seq ExpressionMELO3C022033
SyntenyMELO3C022033
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAGTACACAGAGTTTTAAGCAATCCAAGGGACAATTAGATCAGGTGAACCACAAAGAAACAGATGCTATCTCTGATCGAAGCAACTCGAGTTCTTCATGTACCTCAGATTTGTCACAAGACTCCGCGGTTAGCAGCATTTTTCAGAGTGATCCTCCTGTTCTTCAATCAAAATCAGATGTTGCCGAGCCTCTGGGAGCTGTGCAAACGGTGGAGAATCAATCTGCGGGTTCTCTTAGTAGAATCCAGAGTTCTTCTAGGGGTTCTTCTCATATTCGGTTATCTGGAGCGCTTGGAAACCACGATCCAAATCGAATACCGGTGTCCATCTTCTCTGGTAGACCATCAAACCCTATGGAATGGAGCACTGCTTCAAACGAATCATTGTTCAGTATTCATGTGGGAAACAATAGCTTTTCAAGGGAACATTTCAATTTTTTTAAGTCTGGAGAATTGTTGATGAACCCCAATTCATCCCAGACTTTATCCAACCTGCCCCCTTTTGTTGAACCATTAAGAGCTGACAGTAAATCTGAAATTACGGTGAAGACATCTGCCGATCCAGTGACGTCGGCGTCAACTGCACCTCCGATTTCACCCACATCAAGTCACAATGTAGCAGATCACAAAAAAGAAGTCACGACAACTATGGATGAGCTTCGAGGTCGACAGAGCGTATCAAACGACAGCATGAATAGCTCTCGTTCATTTCAGTTCCCACTGTAAGCAATCCTATATCATATGTCTGTTTTGGAGATGTTTTCATTTTGAGCTTGGAATCTAAAACATTATGGCTATAAATTGTGTCTTCTTTTATCAGATTGGCAAGTGAAGGTGCAACACCAAAAACAACTAGCTCTGTTTCAACAGACTCCGGTGCAACATCACACCAACAGCCATCAAAGCTGCAATCGAAGAAGCGGCAATCAGCAAAGCATCAATTGCCAGAACTTCAGTCTTCATCTCAGGCTGCCTCATCTCCAGCCACGAATTCAGGCTCAGGCTGGTTTTCCTGTCTCTCTTGGTGTCGATGCCGATGACGAAATCTCTGCTTGTGTTGACTATACTACTTGTTCTACTCACATCACCACAGAGAAAAGCTACAGAAGATGGTAACTTTACACTCTAGCTAATTAGTTCTCTCTAAATGAAAAGAAAAACAGAGAAGAAGAACAAGAGCTCCAATATATTGACCTCCTTAAGAGTTTATAGCAGAAGAATTAGTTATTATTATTGTAACAATCCTTTTTTTTTTCTTTCGAATTCTCCATTCTCTAGATAACATAAGGCTGAATGAAATCGATTGTTTGATTTATTCTCTCTGGCTTTGATTAAAACTACTACTTTATTATACCGCAAACTTATCTTCATCAAAACCTTGACTTGTTAACAGCTGTTTATGTATATTGATAAACTTTTCATCTTATGACTTGTTAACCGATTCTTTTTATGATTAATAACCCGACCATGTTTGTCGGTGTGTTCATAATGTTGGTGAAAAAAGTGACGATTAGATTAGTATTACTTTACACATAAAATTGATCCCAAAATGACTATTAGGTTGGTATTACTCTACACATGACCATTTCTAGTATAAAAATTCTATTACTGTCTA

mRNA sequence

ATGGATAGTACACAGAGTTTTAAGCAATCCAAGGGACAATTAGATCAGGTGAACCACAAAGAAACAGATGCTATCTCTGATCGAAGCAACTCGAGTTCTTCATGTACCTCAGATTTGTCACAAGACTCCGCGGTTAGCAGCATTTTTCAGAGTGATCCTCCTGTTCTTCAATCAAAATCAGATGTTGCCGAGCCTCTGGGAGCTGTGCAAACGGTGGAGAATCAATCTGCGGGTTCTCTTAGTAGAATCCAGAGTTCTTCTAGGGGTTCTTCTCATATTCGGTTATCTGGAGCGCTTGGAAACCACGATCCAAATCGAATACCGGTGTCCATCTTCTCTGGTAGACCATCAAACCCTATGGAATGGAGCACTGCTTCAAACGAATCATTGTTCAGTATTCATGTGGGAAACAATAGCTTTTCAAGGGAACATTTCAATTTTTTTAAGTCTGGAGAATTGTTGATGAACCCCAATTCATCCCAGACTTTATCCAACCTGCCCCCTTTTGTTGAACCATTAAGAGCTGACAGTAAATCTGAAATTACGGTGAAGACATCTGCCGATCCAGTGACGTCGGCGTCAACTGCACCTCCGATTTCACCCACATCAAGTCACAATGTAGCAGATCACAAAAAAGAAGTCACGACAACTATGGATGAGCTTCGAGGTCGACAGAGCGTATCAAACGACAGCATGAATAGCTCTCATTGGCAAGTGAAGGTGCAACACCAAAAACAACTAGCTCTGTTTCAACAGACTCCGGTGCAACATCACACCAACAGCCATCAAAGCTGCAATCGAAGAAGCGGCAATCAGCAAAGCATCAATTGCCAGAACTTCAGTCTTCATCTCAGGCTGCCTCATCTCCAGCCACGAATTCAGGCTCAGGCTGGTTTTCCTGTCTCTCTTGGTGTCGATGCCGATGACGAAATCTCTGCTTGTGTTGACTATACTACTTGTTCTACTCACATCACCACAGAGAAAAGCTACAGAAGATGGTAACTTTACACTCTAGCTAATTAGTTCTCTCTAAATGAAAAGAAAAACAGAGAAGAAGAACAAGAGCTCCAATATATTGACCTCCTTAAGAGTTTATAGCAGAAGAATTAGTTATTATTATTGTAACAATCCTTTTTTTTTTCTTTCGAATTCTCCATTCTCTAGATAACATAAGGCTGAATGAAATCGATTGTTTGATTTATTCTCTCTGGCTTTGATTAAAACTACTACTTTATTATACCGCAAACTTATCTTCATCAAAACCTTGACTTGTTAACAGCTGTTTATGTATATTGATAAACTTTTCATCTTATGACTTGTTAACCGATTCTTTTTATGATTAATAACCCGACCATGTTTGTCGGTGTGTTCATAATGTTGGTGAAAAAAGTGACGATTAGATTAGTATTACTTTACACATAAAATTGATCCCAAAATGACTATTAGGTTGGTATTACTCTACACATGACCATTTCTAGTATAAAAATTCTATTACTGTCTA

Coding sequence (CDS)

ATGGATAGTACACAGAGTTTTAAGCAATCCAAGGGACAATTAGATCAGGTGAACCACAAAGAAACAGATGCTATCTCTGATCGAAGCAACTCGAGTTCTTCATGTACCTCAGATTTGTCACAAGACTCCGCGGTTAGCAGCATTTTTCAGAGTGATCCTCCTGTTCTTCAATCAAAATCAGATGTTGCCGAGCCTCTGGGAGCTGTGCAAACGGTGGAGAATCAATCTGCGGGTTCTCTTAGTAGAATCCAGAGTTCTTCTAGGGGTTCTTCTCATATTCGGTTATCTGGAGCGCTTGGAAACCACGATCCAAATCGAATACCGGTGTCCATCTTCTCTGGTAGACCATCAAACCCTATGGAATGGAGCACTGCTTCAAACGAATCATTGTTCAGTATTCATGTGGGAAACAATAGCTTTTCAAGGGAACATTTCAATTTTTTTAAGTCTGGAGAATTGTTGATGAACCCCAATTCATCCCAGACTTTATCCAACCTGCCCCCTTTTGTTGAACCATTAAGAGCTGACAGTAAATCTGAAATTACGGTGAAGACATCTGCCGATCCAGTGACGTCGGCGTCAACTGCACCTCCGATTTCACCCACATCAAGTCACAATGTAGCAGATCACAAAAAAGAAGTCACGACAACTATGGATGAGCTTCGAGGTCGACAGAGCGTATCAAACGACAGCATGAATAGCTCTCATTGGCAAGTGAAGGTGCAACACCAAAAACAACTAGCTCTGTTTCAACAGACTCCGGTGCAACATCACACCAACAGCCATCAAAGCTGCAATCGAAGAAGCGGCAATCAGCAAAGCATCAATTGCCAGAACTTCAGTCTTCATCTCAGGCTGCCTCATCTCCAGCCACGAATTCAGGCTCAGGCTGGTTTTCCTGTCTCTCTTGGTGTCGATGCCGATGACGAAATCTCTGCTTGTGTTGACTATACTACTTGTTCTACTCACATCACCACAGAGAAAAGCTACAGAAGATGGTAA

Protein sequence

MDSTQSFKQSKGQLDQVNHKETDAISDRSNSSSSCTSDLSQDSAVSSIFQSDPPVLQSKSDVAEPLGAVQTVENQSAGSLSRIQSSSRGSSHIRLSGALGNHDPNRIPVSIFSGRPSNPMEWSTASNESLFSIHVGNNSFSREHFNFFKSGELLMNPNSSQTLSNLPPFVEPLRADSKSEITVKTSADPVTSASTAPPISPTSSHNVADHKKEVTTTMDELRGRQSVSNDSMNSSHWQVKVQHQKQLALFQQTPVQHHTNSHQSCNRRSGNQQSINCQNFSLHLRLPHLQPRIQAQAGFPVSLGVDADDEISACVDYTTCSTHITTEKSYRRW
Homology
BLAST of MELO3C022033 vs. NCBI nr
Match: KAA0039436.1 (uncharacterized protein E6C27_scaffold64G002430 [Cucumis melo var. makuwa] >TYK00625.1 uncharacterized protein E5676_scaffold169G002450 [Cucumis melo var. makuwa])

HSP 1 Score: 433.7 bits (1114), Expect = 1.4e-117
Identity = 247/320 (77.19%), Postives = 259/320 (80.94%), Query Frame = 0

Query: 1   MDSTQSFKQSKGQLDQVNHKETDAISDRSNSSSSCTSDLSQDSAVSSIFQSDPPVLQSKS 60
           MDSTQSFKQSKGQLDQVNHKETDAISDRSNSSSSCTSDLSQDSAVSSIFQSDPPVLQSKS
Sbjct: 54  MDSTQSFKQSKGQLDQVNHKETDAISDRSNSSSSCTSDLSQDSAVSSIFQSDPPVLQSKS 113

Query: 61  DVAEPLGAVQTVENQSAGSLSRIQSSSRGSSHIRLSGALGNHDPNRIPVSIFSGRPSNPM 120
           DVAEPLGAVQTVENQSAGSLSRIQSSSRGSSHIRLSGALGNHDPNRIPVSIFSGRPSNPM
Sbjct: 114 DVAEPLGAVQTVENQSAGSLSRIQSSSRGSSHIRLSGALGNHDPNRIPVSIFSGRPSNPM 173

Query: 121 EWSTASNESLFSIHVGNNSFSREHFNFFKSGELLMNPNSSQTLSNLPPFVEPLRADSKSE 180
           EWSTASNESLFSIHVGNNSFSREHFNFFKSGELLMNPNSSQTLSNLPPFVEPLRADSKSE
Sbjct: 174 EWSTASNESLFSIHVGNNSFSREHFNFFKSGELLMNPNSSQTLSNLPPFVEPLRADSKSE 233

Query: 181 ITVKTSADPVTSASTAPPISPTSSHNVADHKKEVTTTMDELRGRQSVSNDSMNSSHWQVK 240
           ITVKTSADPVTSASTAPPISPTSSHNVADHKKEVTTTMDELRGRQSVSNDSMNSS     
Sbjct: 234 ITVKTSADPVTSASTAPPISPTSSHNVADHKKEVTTTMDELRGRQSVSNDSMNSS----- 293

Query: 241 VQHQKQLALFQQTPVQHHTNSHQSCNRRSGNQQSINCQNFSLHLRLPHLQPRIQAQAGFP 300
                Q  L         T S  S +  + + Q  +           H  P +Q+ +   
Sbjct: 294 --RSFQFPLLASEGATPKTTSSVSTDSGATSHQQPSKLQSKKRQSAKHQLPELQSSSQAA 353

Query: 301 VSLGVDADDEISACVDYTTC 321
            S   ++     +C+ +  C
Sbjct: 354 SSPATNSGSGWFSCLSWCRC 366

BLAST of MELO3C022033 vs. NCBI nr
Match: XP_008459383.1 (PREDICTED: uncharacterized protein LOC103498531 [Cucumis melo] >XP_016902402.1 PREDICTED: uncharacterized protein LOC103498531 [Cucumis melo])

HSP 1 Score: 433.7 bits (1114), Expect = 1.4e-117
Identity = 247/320 (77.19%), Postives = 259/320 (80.94%), Query Frame = 0

Query: 1   MDSTQSFKQSKGQLDQVNHKETDAISDRSNSSSSCTSDLSQDSAVSSIFQSDPPVLQSKS 60
           MDSTQSFKQSKGQLDQVNHKETDAISDRSNSSSSCTSDLSQDSAVSSIFQSDPPVLQSKS
Sbjct: 1   MDSTQSFKQSKGQLDQVNHKETDAISDRSNSSSSCTSDLSQDSAVSSIFQSDPPVLQSKS 60

Query: 61  DVAEPLGAVQTVENQSAGSLSRIQSSSRGSSHIRLSGALGNHDPNRIPVSIFSGRPSNPM 120
           DVAEPLGAVQTVENQSAGSLSRIQSSSRGSSHIRLSGALGNHDPNRIPVSIFSGRPSNPM
Sbjct: 61  DVAEPLGAVQTVENQSAGSLSRIQSSSRGSSHIRLSGALGNHDPNRIPVSIFSGRPSNPM 120

Query: 121 EWSTASNESLFSIHVGNNSFSREHFNFFKSGELLMNPNSSQTLSNLPPFVEPLRADSKSE 180
           EWSTASNESLFSIHVGNNSFSREHFNFFKSGELLMNPNSSQTLSNLPPFVEPLRADSKSE
Sbjct: 121 EWSTASNESLFSIHVGNNSFSREHFNFFKSGELLMNPNSSQTLSNLPPFVEPLRADSKSE 180

Query: 181 ITVKTSADPVTSASTAPPISPTSSHNVADHKKEVTTTMDELRGRQSVSNDSMNSSHWQVK 240
           ITVKTSADPVTSASTAPPISPTSSHNVADHKKEVTTTMDELRGRQSVSNDSMNSS     
Sbjct: 181 ITVKTSADPVTSASTAPPISPTSSHNVADHKKEVTTTMDELRGRQSVSNDSMNSS----- 240

Query: 241 VQHQKQLALFQQTPVQHHTNSHQSCNRRSGNQQSINCQNFSLHLRLPHLQPRIQAQAGFP 300
                Q  L         T S  S +  + + Q  +           H  P +Q+ +   
Sbjct: 241 --RSFQFPLLASEGATPKTTSSVSTDSGATSHQQPSKLQSKKRQSAKHQLPELQSSSQAA 300

Query: 301 VSLGVDADDEISACVDYTTC 321
            S   ++     +C+ +  C
Sbjct: 301 SSPATNSGSGWFSCLSWCRC 313

BLAST of MELO3C022033 vs. NCBI nr
Match: XP_011656011.1 (uncharacterized protein LOC105435613 [Cucumis sativus] >XP_031742309.1 uncharacterized protein LOC105435613 [Cucumis sativus] >KAE8648941.1 hypothetical protein Csa_007740 [Cucumis sativus])

HSP 1 Score: 398.7 bits (1023), Expect = 5.0e-107
Identity = 230/302 (76.16%), Postives = 248/302 (82.12%), Query Frame = 0

Query: 1   MDSTQSFKQSKGQLDQVNHKETDAISDRSNSSSSCTSDLSQDSAVSSIFQSDPPVLQSKS 60
           MD+TQSFK+SKGQLDQVNHKETDAISDRSNS+SSCTSDLSQDSAVSSIFQSDPPVLQSK 
Sbjct: 3   MDTTQSFKESKGQLDQVNHKETDAISDRSNSNSSCTSDLSQDSAVSSIFQSDPPVLQSKP 62

Query: 61  DVAEPLGAVQTVENQSAGSLSRIQSSSRGSSHIRLSGALGNHDPNRIPVSIFSGRPSNPM 120
           DVAEPLGAVQTVENQ   SLSRIQSSSRGSSHIRLSG LGNHDPNRIPVSIFSGRPSNP 
Sbjct: 63  DVAEPLGAVQTVENQPVDSLSRIQSSSRGSSHIRLSGPLGNHDPNRIPVSIFSGRPSNPT 122

Query: 121 EWSTASNESLFSIHVGNNSFSREHFNFFKSGELLMNPNSSQTLSNLPPFVEPLRADSKSE 180
           EWSTASNESLFSIHVGN+SFSREHFNFFKSGELLMNPN+SQTLSNLPPFVEPLRA+SKSE
Sbjct: 123 EWSTASNESLFSIHVGNSSFSREHFNFFKSGELLMNPNASQTLSNLPPFVEPLRAESKSE 182

Query: 181 ITVKTSADPVTSASTAPPISPTSSHNVADHKKEVTTTMDELRGRQSVSNDSMNSSHWQVK 240
           I VKT A+PVTS+STA P+SPTSS NVADHKKEVTTTMDELRGRQSVSNDSMNSS    +
Sbjct: 183 IAVKTFAEPVTSSSTAHPVSPTSSQNVADHKKEVTTTMDELRGRQSVSNDSMNSSR-SFQ 242

Query: 241 VQHQKQLALFQQTPVQHHTNSHQSCNRRSGNQQSINCQNFSLHLRLPHLQPRIQAQAGFP 300
                      +T     T+S  +  ++    QS   Q  S   +LP LQ   QA +  P
Sbjct: 243 FPLLASEGATPKTTSSVSTDSGVTSQQQPSKLQSKKRQ--SAKHQLPELQSSSQAASPSP 301

Query: 301 VS 303
            +
Sbjct: 303 AT 301

BLAST of MELO3C022033 vs. NCBI nr
Match: XP_038890702.1 (uncharacterized protein LOC120080199 [Benincasa hispida])

HSP 1 Score: 341.3 bits (874), Expect = 9.6e-90
Identity = 193/236 (81.78%), Postives = 205/236 (86.86%), Query Frame = 0

Query: 1   MDSTQSFKQSKGQLDQVNHKETDAISDRSNSSSSCTSDLSQDSAVSSIFQSDPPVLQSKS 60
           MDS QS KQSKG L +V HKETDAIS+RSNS+SSC+S+LSQDSAVSSIFQSDPPVLQ K 
Sbjct: 21  MDSAQSLKQSKGPL-EVTHKETDAISNRSNSNSSCSSNLSQDSAVSSIFQSDPPVLQPKP 80

Query: 61  DVAEPLGAVQTVENQSAGSLSRIQSSSRGSSHIRLSGALGNHDPNRIPVSIFSGRPSNPM 120
           DVAE LGAVQTVEN S GSLSRIQSSSR SS IRLSG LG+HDPNRIPVSIFSGRPSNPM
Sbjct: 81  DVAESLGAVQTVENPSMGSLSRIQSSSRSSSQIRLSGVLGSHDPNRIPVSIFSGRPSNPM 140

Query: 121 EWSTASNESLFSIHVGNNSFSREHFNFF-KSGELLMNPNSSQTLSNLPPFVEPLRADSKS 180
           EWSTASNESLFSIHVGNNSFSREHFNFF KSGEL+MNPNSSQT SNLPPFVEP R +SK+
Sbjct: 141 EWSTASNESLFSIHVGNNSFSREHFNFFTKSGELMMNPNSSQTPSNLPPFVEPARVESKT 200

Query: 181 EITVKTSADPVTSASTAPPISPTSSHNVADHKKEVTTTMDELRGRQSVSNDSMNSS 236
           E+  KT  +P T  STAP I  T S NV+DHKKEVTT  DELRGRQSVSNDSMNSS
Sbjct: 201 EVAGKTFVEPTT--STAPQIPATPSQNVSDHKKEVTTPTDELRGRQSVSNDSMNSS 253

BLAST of MELO3C022033 vs. NCBI nr
Match: XP_022133869.1 (uncharacterized protein LOC111006315 [Momordica charantia] >XP_022133870.1 uncharacterized protein LOC111006315 [Momordica charantia] >XP_022133871.1 uncharacterized protein LOC111006315 [Momordica charantia])

HSP 1 Score: 272.7 bits (696), Expect = 4.2e-69
Identity = 181/306 (59.15%), Postives = 209/306 (68.30%), Query Frame = 0

Query: 1   MDSTQSFKQSKGQLDQVNHKETDAISDRSNSSSSCTSDLSQDSAVSSIFQSDPPVLQSKS 60
           MD  +SFKQSK QL +V HKETD I DRS+S SSC SD SQ+SAVSSIFQ++PP LQ K 
Sbjct: 1   MDCVESFKQSKVQL-EVTHKETDVIPDRSDSHSSCASDSSQESAVSSIFQTNPPALQPKP 60

Query: 61  DVAEPLGAVQTVENQSAGSLSRIQSSSRGSSHIRLSGALGNHDPNRIPVSIFSGRPSNPM 120
           DV E   A QT E+ +   ++RI+SSSRGSS IRLSGALGNHDPNRIPVSIFSG+PSNPM
Sbjct: 61  DVVESPVATQTAEDSTLDCINRIRSSSRGSSQIRLSGALGNHDPNRIPVSIFSGKPSNPM 120

Query: 121 EWSTASNESLFSIHVGNNSFSREHFNFF-KSGELLMNPNSSQTLSN-LPPFVEPLRADSK 180
           EWSTASNESLFSIHVGNNSFSR+HFNFF KSGEL+ NP  +Q  SN LPPFVEP R +SK
Sbjct: 121 EWSTASNESLFSIHVGNNSFSRDHFNFFNKSGELMTNPGLTQNPSNQLPPFVEPARVESK 180

Query: 181 SEITVKTSADPVTSASTAPPISPTSSHNVADHKKEVTTTMDELRGRQSVSNDSMNSSH-W 240
            EIT K   +P+T  ST P I   S   V    +EV+T MD+LRGR SVSNDSMNSS  +
Sbjct: 181 KEITAKPCVEPLT--STGPQIPAIS---VQSATEEVSTPMDDLRGRHSVSNDSMNSSRSF 240

Query: 241 QVKVQHQKQLALFQQTPVQHHTNSHQSCNRRSGNQQSINCQNFSLHLRLP-HLQPRIQAQ 300
           Q  V     L     TP    + S  SC      QQ +  Q  SL  +LP H  P  +A 
Sbjct: 241 QFPV-----LGGEGATPTTASSVSTDSC----PTQQPVAKQQ-SLKQQLPEHQSPSTEAT 290

Query: 301 AGFPVS 303
           +  P +
Sbjct: 301 SASPTA 290

BLAST of MELO3C022033 vs. ExPASy TrEMBL
Match: A0A1S4E2F1 (uncharacterized protein LOC103498531 OS=Cucumis melo OX=3656 GN=LOC103498531 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 6.9e-118
Identity = 247/320 (77.19%), Postives = 259/320 (80.94%), Query Frame = 0

Query: 1   MDSTQSFKQSKGQLDQVNHKETDAISDRSNSSSSCTSDLSQDSAVSSIFQSDPPVLQSKS 60
           MDSTQSFKQSKGQLDQVNHKETDAISDRSNSSSSCTSDLSQDSAVSSIFQSDPPVLQSKS
Sbjct: 1   MDSTQSFKQSKGQLDQVNHKETDAISDRSNSSSSCTSDLSQDSAVSSIFQSDPPVLQSKS 60

Query: 61  DVAEPLGAVQTVENQSAGSLSRIQSSSRGSSHIRLSGALGNHDPNRIPVSIFSGRPSNPM 120
           DVAEPLGAVQTVENQSAGSLSRIQSSSRGSSHIRLSGALGNHDPNRIPVSIFSGRPSNPM
Sbjct: 61  DVAEPLGAVQTVENQSAGSLSRIQSSSRGSSHIRLSGALGNHDPNRIPVSIFSGRPSNPM 120

Query: 121 EWSTASNESLFSIHVGNNSFSREHFNFFKSGELLMNPNSSQTLSNLPPFVEPLRADSKSE 180
           EWSTASNESLFSIHVGNNSFSREHFNFFKSGELLMNPNSSQTLSNLPPFVEPLRADSKSE
Sbjct: 121 EWSTASNESLFSIHVGNNSFSREHFNFFKSGELLMNPNSSQTLSNLPPFVEPLRADSKSE 180

Query: 181 ITVKTSADPVTSASTAPPISPTSSHNVADHKKEVTTTMDELRGRQSVSNDSMNSSHWQVK 240
           ITVKTSADPVTSASTAPPISPTSSHNVADHKKEVTTTMDELRGRQSVSNDSMNSS     
Sbjct: 181 ITVKTSADPVTSASTAPPISPTSSHNVADHKKEVTTTMDELRGRQSVSNDSMNSS----- 240

Query: 241 VQHQKQLALFQQTPVQHHTNSHQSCNRRSGNQQSINCQNFSLHLRLPHLQPRIQAQAGFP 300
                Q  L         T S  S +  + + Q  +           H  P +Q+ +   
Sbjct: 241 --RSFQFPLLASEGATPKTTSSVSTDSGATSHQQPSKLQSKKRQSAKHQLPELQSSSQAA 300

Query: 301 VSLGVDADDEISACVDYTTC 321
            S   ++     +C+ +  C
Sbjct: 301 SSPATNSGSGWFSCLSWCRC 313

BLAST of MELO3C022033 vs. ExPASy TrEMBL
Match: A0A5A7TBM6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002450 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 6.9e-118
Identity = 247/320 (77.19%), Postives = 259/320 (80.94%), Query Frame = 0

Query: 1   MDSTQSFKQSKGQLDQVNHKETDAISDRSNSSSSCTSDLSQDSAVSSIFQSDPPVLQSKS 60
           MDSTQSFKQSKGQLDQVNHKETDAISDRSNSSSSCTSDLSQDSAVSSIFQSDPPVLQSKS
Sbjct: 54  MDSTQSFKQSKGQLDQVNHKETDAISDRSNSSSSCTSDLSQDSAVSSIFQSDPPVLQSKS 113

Query: 61  DVAEPLGAVQTVENQSAGSLSRIQSSSRGSSHIRLSGALGNHDPNRIPVSIFSGRPSNPM 120
           DVAEPLGAVQTVENQSAGSLSRIQSSSRGSSHIRLSGALGNHDPNRIPVSIFSGRPSNPM
Sbjct: 114 DVAEPLGAVQTVENQSAGSLSRIQSSSRGSSHIRLSGALGNHDPNRIPVSIFSGRPSNPM 173

Query: 121 EWSTASNESLFSIHVGNNSFSREHFNFFKSGELLMNPNSSQTLSNLPPFVEPLRADSKSE 180
           EWSTASNESLFSIHVGNNSFSREHFNFFKSGELLMNPNSSQTLSNLPPFVEPLRADSKSE
Sbjct: 174 EWSTASNESLFSIHVGNNSFSREHFNFFKSGELLMNPNSSQTLSNLPPFVEPLRADSKSE 233

Query: 181 ITVKTSADPVTSASTAPPISPTSSHNVADHKKEVTTTMDELRGRQSVSNDSMNSSHWQVK 240
           ITVKTSADPVTSASTAPPISPTSSHNVADHKKEVTTTMDELRGRQSVSNDSMNSS     
Sbjct: 234 ITVKTSADPVTSASTAPPISPTSSHNVADHKKEVTTTMDELRGRQSVSNDSMNSS----- 293

Query: 241 VQHQKQLALFQQTPVQHHTNSHQSCNRRSGNQQSINCQNFSLHLRLPHLQPRIQAQAGFP 300
                Q  L         T S  S +  + + Q  +           H  P +Q+ +   
Sbjct: 294 --RSFQFPLLASEGATPKTTSSVSTDSGATSHQQPSKLQSKKRQSAKHQLPELQSSSQAA 353

Query: 301 VSLGVDADDEISACVDYTTC 321
            S   ++     +C+ +  C
Sbjct: 354 SSPATNSGSGWFSCLSWCRC 366

BLAST of MELO3C022033 vs. ExPASy TrEMBL
Match: A0A0A0KXK8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G639470 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 2.4e-107
Identity = 230/302 (76.16%), Postives = 248/302 (82.12%), Query Frame = 0

Query: 1   MDSTQSFKQSKGQLDQVNHKETDAISDRSNSSSSCTSDLSQDSAVSSIFQSDPPVLQSKS 60
           MD+TQSFK+SKGQLDQVNHKETDAISDRSNS+SSCTSDLSQDSAVSSIFQSDPPVLQSK 
Sbjct: 1   MDTTQSFKESKGQLDQVNHKETDAISDRSNSNSSCTSDLSQDSAVSSIFQSDPPVLQSKP 60

Query: 61  DVAEPLGAVQTVENQSAGSLSRIQSSSRGSSHIRLSGALGNHDPNRIPVSIFSGRPSNPM 120
           DVAEPLGAVQTVENQ   SLSRIQSSSRGSSHIRLSG LGNHDPNRIPVSIFSGRPSNP 
Sbjct: 61  DVAEPLGAVQTVENQPVDSLSRIQSSSRGSSHIRLSGPLGNHDPNRIPVSIFSGRPSNPT 120

Query: 121 EWSTASNESLFSIHVGNNSFSREHFNFFKSGELLMNPNSSQTLSNLPPFVEPLRADSKSE 180
           EWSTASNESLFSIHVGN+SFSREHFNFFKSGELLMNPN+SQTLSNLPPFVEPLRA+SKSE
Sbjct: 121 EWSTASNESLFSIHVGNSSFSREHFNFFKSGELLMNPNASQTLSNLPPFVEPLRAESKSE 180

Query: 181 ITVKTSADPVTSASTAPPISPTSSHNVADHKKEVTTTMDELRGRQSVSNDSMNSSHWQVK 240
           I VKT A+PVTS+STA P+SPTSS NVADHKKEVTTTMDELRGRQSVSNDSMNSS    +
Sbjct: 181 IAVKTFAEPVTSSSTAHPVSPTSSQNVADHKKEVTTTMDELRGRQSVSNDSMNSSR-SFQ 240

Query: 241 VQHQKQLALFQQTPVQHHTNSHQSCNRRSGNQQSINCQNFSLHLRLPHLQPRIQAQAGFP 300
                      +T     T+S  +  ++    QS   Q  S   +LP LQ   QA +  P
Sbjct: 241 FPLLASEGATPKTTSSVSTDSGVTSQQQPSKLQSKKRQ--SAKHQLPELQSSSQAASPSP 299

Query: 301 VS 303
            +
Sbjct: 301 AT 299

BLAST of MELO3C022033 vs. ExPASy TrEMBL
Match: A0A6J1BWD8 (uncharacterized protein LOC111006315 OS=Momordica charantia OX=3673 GN=LOC111006315 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 2.0e-69
Identity = 181/306 (59.15%), Postives = 209/306 (68.30%), Query Frame = 0

Query: 1   MDSTQSFKQSKGQLDQVNHKETDAISDRSNSSSSCTSDLSQDSAVSSIFQSDPPVLQSKS 60
           MD  +SFKQSK QL +V HKETD I DRS+S SSC SD SQ+SAVSSIFQ++PP LQ K 
Sbjct: 1   MDCVESFKQSKVQL-EVTHKETDVIPDRSDSHSSCASDSSQESAVSSIFQTNPPALQPKP 60

Query: 61  DVAEPLGAVQTVENQSAGSLSRIQSSSRGSSHIRLSGALGNHDPNRIPVSIFSGRPSNPM 120
           DV E   A QT E+ +   ++RI+SSSRGSS IRLSGALGNHDPNRIPVSIFSG+PSNPM
Sbjct: 61  DVVESPVATQTAEDSTLDCINRIRSSSRGSSQIRLSGALGNHDPNRIPVSIFSGKPSNPM 120

Query: 121 EWSTASNESLFSIHVGNNSFSREHFNFF-KSGELLMNPNSSQTLSN-LPPFVEPLRADSK 180
           EWSTASNESLFSIHVGNNSFSR+HFNFF KSGEL+ NP  +Q  SN LPPFVEP R +SK
Sbjct: 121 EWSTASNESLFSIHVGNNSFSRDHFNFFNKSGELMTNPGLTQNPSNQLPPFVEPARVESK 180

Query: 181 SEITVKTSADPVTSASTAPPISPTSSHNVADHKKEVTTTMDELRGRQSVSNDSMNSSH-W 240
            EIT K   +P+T  ST P I   S   V    +EV+T MD+LRGR SVSNDSMNSS  +
Sbjct: 181 KEITAKPCVEPLT--STGPQIPAIS---VQSATEEVSTPMDDLRGRHSVSNDSMNSSRSF 240

Query: 241 QVKVQHQKQLALFQQTPVQHHTNSHQSCNRRSGNQQSINCQNFSLHLRLP-HLQPRIQAQ 300
           Q  V     L     TP    + S  SC      QQ +  Q  SL  +LP H  P  +A 
Sbjct: 241 QFPV-----LGGEGATPTTASSVSTDSC----PTQQPVAKQQ-SLKQQLPEHQSPSTEAT 290

Query: 301 AGFPVS 303
           +  P +
Sbjct: 301 SASPTA 290

BLAST of MELO3C022033 vs. ExPASy TrEMBL
Match: A0A6J1K2X5 (uncharacterized protein LOC111489581 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489581 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 1.6e-61
Identity = 157/237 (66.24%), Postives = 173/237 (73.00%), Query Frame = 0

Query: 1   MDSTQSFKQSKGQLDQVNHKETDAISDRSNSSSSCTSDLSQDSAVSSIFQSDPPVLQSKS 60
           MD  QS KQSK QL+   HKETD I DRSNS+ S TS+LS+DSA           LQ K 
Sbjct: 1   MDCAQSNKQSKEQLEMA-HKETDVIPDRSNSNCSSTSELSRDSA-----------LQPKP 60

Query: 61  DVAEPLGAVQTVENQSAGSLSRIQSSSRGSSHIRLSGALGNHDPNRIPVSIFSGRPSNPM 120
           DV E +GAVQT EN S GS  RIQSSS+    IRLSG L NHDPNRIP+SIFSG+PSNPM
Sbjct: 61  DVFEFMGAVQTAENLSLGS-CRIQSSSQ----IRLSGVLENHDPNRIPISIFSGKPSNPM 120

Query: 121 EWSTASNESLFSIHVGNNSFSREHFNFF-KSGELLMNPNSSQTLSNLPPFVEPLRADSKS 180
           EWSTASNESLFSIHVGNNSFSRE+FNFF KSGEL++NPNSS  L +LPP VEP R +SK+
Sbjct: 121 EWSTASNESLFSIHVGNNSFSRENFNFFTKSGELMLNPNSSLNLPSLPPLVEPPRVESKT 180

Query: 181 EITVKTSADPVTSASTAPPISPTSSHNVADHKKEVTTTMDELRGRQSVSNDSMNSSH 237
            ITV  SA+PVT  ST P I   S H     K+  TT  DELRGRQSVSNDSMNSSH
Sbjct: 181 GITVNVSAEPVT--STGPQIPAISVH----QKEPTTTPTDELRGRQSVSNDSMNSSH 214

BLAST of MELO3C022033 vs. TAIR 10
Match: AT3G02125.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: pollen tube; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G39200.1); Has 2247 Blast hits to 1434 proteins in 202 species: Archae - 4; Bacteria - 111; Metazoa - 942; Fungi - 239; Plants - 140; Viruses - 37; Other Eukaryotes - 774 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 1.8e-09
Identity = 51/123 (41.46%), Postives = 63/123 (51.22%), Query Frame = 0

Query: 19  HKETDAISDRSNSSSSCTSDLSQDSAVSSIFQSDPPVLQSKSDVAEPLGAVQTVENQSAG 78
           H+  D++S RS+S SS  +  S D          P    S S+ A+ L       N S  
Sbjct: 10  HQWKDSVSSRSSSRSSSITSASSDGHFDIRHFPLPKPSLSASE-AQKLRESHQAYNSSVS 69

Query: 79  SLSRIQSSSRGSSHIRLSGALGNHDPNRIPVSIFSGRPSNPMEWSTASNESLFSIHVGNN 138
           S +   SSS  S+H      L  +DP RIP S+FS +P N  EWS ASNESLFSIH GN 
Sbjct: 70  SYT---SSSWSSNHQNHLIDLPGYDPTRIPSSVFSSKPGNSTEWSLASNESLFSIHDGNF 128

Query: 139 SFS 142
           S S
Sbjct: 130 SIS 128

BLAST of MELO3C022033 vs. TAIR 10
Match: AT2G03630.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74220.1); Has 87 Blast hits to 87 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 59.7 bits (143), Expect = 5.2e-09
Identity = 59/153 (38.56%), Postives = 73/153 (47.71%), Query Frame = 0

Query: 11  KGQLD----QVNHK-----ETDAISDRSNSSSSCTSDLSQDSAVSSIFQSDPPVLQSKSD 70
           KG LD     V HK     ET+ +   S S S  +S  S  S+ SS     PP    +  
Sbjct: 22  KGSLDDENGDVEHKTIPLQETETVIINSESHSRLSSSSSSSSSSSSYL--SPPKDLPEEV 81

Query: 71  VAEPLGAVQTVENQSAGSLSRIQSSSRGSSHIRLSGALGNHDPNRIPVSIFSGRPSN-PM 130
           + E L       N    S   +Q   R ++        G +DPNRIP S+F    SN P 
Sbjct: 82  LKESL-------NDPEISSPPVQVMDRDNN--------GKYDPNRIPSSVFERSKSNVPA 141

Query: 131 EWSTASNESLFSIHVGNNSFSREHFNFFKSGEL 154
           EWS  SNESLFSIH+GNNSF+    +  KSGEL
Sbjct: 142 EWSCTSNESLFSIHLGNNSFTGYGGDLMKSGEL 157

BLAST of MELO3C022033 vs. TAIR 10
Match: AT2G03630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74220.1); Has 126 Blast hits to 126 proteins in 28 species: Archae - 0; Bacteria - 6; Metazoa - 7; Fungi - 5; Plants - 87; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). )

HSP 1 Score: 52.4 bits (124), Expect = 8.3e-07
Identity = 77/242 (31.82%), Postives = 99/242 (40.91%), Query Frame = 0

Query: 11  KGQLD----QVNHK-----ETDAISDRSNSSSSCTSDLSQDSAVSSIFQSDPPVLQSKSD 70
           KG LD     V HK     ET+ +   S S S  +S  S  S+ SS     PP    +  
Sbjct: 22  KGSLDDENGDVEHKTIPLQETETVIINSESHSRLSSSSSSSSSSSSYL--SPPKDLPEEV 81

Query: 71  VAEPLGAVQTVENQSAGSLSRIQSSSRGSSHIRLSGALGNHDPNRIPVSIFSGRPSN-PM 130
           + E L       N    S   +Q   R ++        G +DPNRIP S+F    SN P 
Sbjct: 82  LKESL-------NDPEISSPPVQVMDRDNN--------GKYDPNRIPSSVFERSKSNVPA 141

Query: 131 EWSTASNESLFSIHVGNNSFSREHFNFFKSGELLMNPNSSQTLSNLP----PFVEPLRAD 190
           EWS  SNESLFSIH+GNNSF+    +  KSGEL  +         LP    P  EP    
Sbjct: 142 EWSCTSNESLFSIHLGNNSFTGYGGDLMKSGELYKSGELLAYSPGLPMPPVPGSEPKPVV 201

Query: 191 SKSEITVKTSADPVTSA-STAPPISPTSSHNVADHKKEVTTTMDELRGRQSV-SNDSMNS 237
            + ++      + V     T    S         H+KE    +       S  SN S NS
Sbjct: 202 EEPKVVESDKEEKVVLVEETHTSSSDEEEGKRESHEKEQHPAVSWKTPTTSYRSNRSSNS 246

BLAST of MELO3C022033 vs. TAIR 10
Match: AT1G74220.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G03630.1); Has 383 Blast hits to 347 proteins in 86 species: Archae - 0; Bacteria - 17; Metazoa - 87; Fungi - 65; Plants - 76; Viruses - 2; Other Eukaryotes - 136 (source: NCBI BLink). )

HSP 1 Score: 52.0 bits (123), Expect = 1.1e-06
Identity = 54/159 (33.96%), Postives = 67/159 (42.14%), Query Frame = 0

Query: 9   QSKGQLDQVNHKETDAISDRSNSSSSCTSDLSQDSAVSSIFQSDPPVLQSKSDVAEPLGA 68
           QS   L      E   I   S+SSSSC          SSI     P      +  E    
Sbjct: 15  QSSRNLASKPETEDPIIRLSSSSSSSC----------SSIEAEPRPDQNHNHNNVEQSPP 74

Query: 69  VQTVENQSAGSLSRIQSSSRGSSHIRLSGALGNHDPNRIPVSIFSGRPSNPMEWSTASNE 128
            Q +E  +  + +   S+              N  P RIP  +F+   S   EWST SNE
Sbjct: 75  TQVMERSTNNTTTTTTSTP-------------NTPPYRIPSHVFARTTSTAPEWSTISNE 134

Query: 129 SLFSIHVGNNSFSREHFNFFKSGELLMNPNSSQTLSNLP 168
           SLFSIH+GNNSF+    ++FKSGEL      S   S LP
Sbjct: 135 SLFSIHMGNNSFTGG--DYFKSGELTFPQPPSPITSPLP 148

BLAST of MELO3C022033 vs. TAIR 10
Match: AT5G39200.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G39140.1); Has 65 Blast hits to 65 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.8 bits (120), Expect = 2.4e-06
Identity = 47/151 (31.13%), Postives = 69/151 (45.70%), Query Frame = 0

Query: 102 HDPNRIPVSIFSGRPSNPMEWSTASNESLFSIHVGNNSFSREHFNFFKSGEL-----LMN 161
           ++P+RIP S+F+   +   EWS  SNESLFSIH+G++SFS+     +KSGEL       +
Sbjct: 9   YEPDRIPHSVFATSVTPKQEWSIQSNESLFSIHMGDHSFSK----MYKSGELTNFEYTAS 68

Query: 162 PNSSQTLSNLPPFVEPLRADSKSEITVKTSADPVT----SASTAP--------PISPTSS 221
           P  S   +N+   + P  A +K          P T      +  P        PISPT S
Sbjct: 69  PYISYYNNNIDNKIAPTDAGTKEVNITMVETGPKTGNRDGLTNVPKPDPRQQIPISPTKS 128

Query: 222 -HNVADHKKEVTTTMDELRGRQSVSNDSMNS 235
            H+   +    +     L   Q     S+N+
Sbjct: 129 CHSETSNNSTTSFAFPTLGEYQQERKTSLNT 155

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0039436.11.4e-11777.19uncharacterized protein E6C27_scaffold64G002430 [Cucumis melo var. makuwa] >TYK0... [more]
XP_008459383.11.4e-11777.19PREDICTED: uncharacterized protein LOC103498531 [Cucumis melo] >XP_016902402.1 P... [more]
XP_011656011.15.0e-10776.16uncharacterized protein LOC105435613 [Cucumis sativus] >XP_031742309.1 uncharact... [more]
XP_038890702.19.6e-9081.78uncharacterized protein LOC120080199 [Benincasa hispida][more]
XP_022133869.14.2e-6959.15uncharacterized protein LOC111006315 [Momordica charantia] >XP_022133870.1 uncha... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S4E2F16.9e-11877.19uncharacterized protein LOC103498531 OS=Cucumis melo OX=3656 GN=LOC103498531 PE=... [more]
A0A5A7TBM66.9e-11877.19Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KXK82.4e-10776.16Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G639470 PE=4 SV=1[more]
A0A6J1BWD82.0e-6959.15uncharacterized protein LOC111006315 OS=Momordica charantia OX=3673 GN=LOC111006... [more]
A0A6J1K2X51.6e-6166.24uncharacterized protein LOC111489581 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
Match NameE-valueIdentityDescription
AT3G02125.11.8e-0941.46unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G03630.25.2e-0938.56unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G03630.18.3e-0731.82unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G74220.11.1e-0633.96unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G39200.12.4e-0631.13unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..205
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..211
NoneNo IPR availablePANTHERPTHR33673:SF3SUPPRESSOR SRP40-LIKE PROTEINcoord: 10..273
NoneNo IPR availablePANTHERPTHR33673SUPPRESSOR SRP40-LIKE PROTEINcoord: 10..273

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C022033.1MELO3C022033.1mRNA