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MELO3C022001 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATGCACATTAAGCTTTCCAAAAGAAACCACTTCTCCAACCTTCATAATCCAAACAACAACCAACCCTTTCTAGAAATTAAGATGAAGGCTGTTACCGGCGAGTCGAGTGAGCTAAAGAGTTCCAAACTCAAACCAGGGGTGAACCGCGGTTTATCGATATTCGATTTCATCCTAAGGTTGGCAGCCATTGTTGGAGCCTTAGGAAGTGCAATAGCTATGGGAACAACCACCCAGACTCTTCCATTTGCCACACAGTTTATTCAGTTTAGAGCTGAGTATAATGATCTTCCTATGTTTACGTATGTCAAAATCACAAGCATTTGATTTATAATTCAAACTAATTCCTCATGACTTTACTAACCTCTTTTGATTGTTTGAGCAGCTTCTTTGTTGTAGCCTGCGCCATTGTAAGTGGCTACTTGGTTCTATCTCTGCCTCTTTCTATATTCCACATCTTGAGGAGCAGAGCACGTGCGACAAGGGTTGTGTTGGTATTCTTGGACGCTGTACGTATGAAGTTTAACCATTTTCCATCTATGAAGCACATAGACTAACAAATATGAAATATGGATATAGATATAATATGATATGGTGATACGTTAATTTTTAAAAACTAGAATACAGATAAGATACGTTCTTTTATAAAAAAAAAAAAACTCGGAACATATGTATAATAAACATAGAGATACTAAATTCATCCACTTAAAAGCAAAAAATGTCAAACTTAATGATAATAATACAATACAAAAGGTGGGATAGAGATATTTTGAAATAGAATGAATAGTCAATAAAATACAATAGAAAAGGTCGGTAGAACACCAAGGTCAAATCAATCAAAGAAGAAGATTATAGGAAAATATATGAAAATAAACGAATAACTTCTTCATTGAATTATTAAAGATAAATAATCAGGTGAATTATTTTTTGTGCGGCTTTGTGGGGACTGAGCGTGAAGATGGAGATTATATGATTTTAGGGTTTGGTTTTTTATTTTTATTTTTCTCTTAGTTTTGGGTTGGGCAGTGACTGTGAGGTTTTTAAAAAGGCTACTAAGTTCTAGAAAGGATCACACGTATTTTGATATTAAAAATAATAATAACAAATATGTCAAATAGTGCATCCAATATGGATCTAAGAAATATCAAGAAGTATTGGTATGTGATACGTATCCAATATTGGTTCTCTGCATGCCATGAAGTATTTGTGCCTCATAGCTTTTCATAAATGTCATTGTCAACAGCTTACAAAAACCATCAATCGAGTAAAAACATGCGAATAAACTTTGGCAGTGATTAAGAAAAAGAAAGAAAGAAAAGTCGACCAAGTTCGCTTACTTGTGTTTTTTGTGCAATTGTGAAAAGGGAATGATGGCTCTTTTGACATCTGGGGCTTCTGCAGCGGCAGCCATTGTGTACTTAGCACACAAAGGAAATGGCAAGACAAATTGGCTAGCTATCTGCCAGCAATTTAACTCATTTTGCGAGCGAACCTCTGGCTCTTTGATCGGATCTTTTGTAGCAATTGTTCTACTTATGATTATGATTTTCCTGTCTGGTGCAGCATTGTCTCGTCGCCGTTGAAAGTAGTTTATCATCATCACAACCTTGCAAGTTTATGAGAACTACATCTGGGTCTTTTAATCTGCAAATCATAGTTCATATACAAATTTGAGTGTGTTAAAAAATGGCTAGAGGTCCAACTTGTCTTTGTGTGGGTGATGTATTGTTATTTCTACCAAGTGGATGTAAGAATTAGCTTCAGTTTGTAATGAGAACCGTATGAATACTATAACATCTCTGAGTCAGCCGAACAACATAGAGATTTCA AATGCACATTAAGCTTTCCAAAAGAAACCACTTCTCCAACCTTCATAATCCAAACAACAACCAACCCTTTCTAGAAATTAAGATGAAGGCTGTTACCGGCGAGTCGAGTGAGCTAAAGAGTTCCAAACTCAAACCAGGGGTGAACCGCGGTTTATCGATATTCGATTTCATCCTAAGGTTGGCAGCCATTGTTGGAGCCTTAGGAAGTGCAATAGCTATGGGAACAACCACCCAGACTCTTCCATTTGCCACACAGTTTATTCAGTTTAGAGCTGAGTATAATGATCTTCCTATGTTTACCTTCTTTGTTGTAGCCTGCGCCATTGTAAGTGGCTACTTGGTTCTATCTCTGCCTCTTTCTATATTCCACATCTTGAGGAGCAGAGCACGTGCGACAAGGGTTGTGTTGGTATTCTTGGACGCTGGAATGATGGCTCTTTTGACATCTGGGGCTTCTGCAGCGGCAGCCATTGTGTACTTAGCACACAAAGGAAATGGCAAGACAAATTGGCTAGCTATCTGCCAGCAATTTAACTCATTTTGCGAGCGAACCTCTGGCTCTTTGATCGGATCTTTTGTAGCAATTGTTCTACTTATGATTATGATTTTCCTGTCTGGTGCAGCATTGTCTCGTCGCCGTTGAAAGTAGTTTATCATCATCACAACCTTGCAAGTTTATGAGAACTACATCTGGGTCTTTTAATCTGCAAATCATAGTTCATATACAAATTTGAGTGTGTTAAAAAATGGCTAGAGGTCCAACTTGTCTTTGTGTGGGTGATGTATTGTTATTTCTACCAAGTGGATGTAAGAATTAGCTTCAGTTTGTAATGAGAACCGTATGAATACTATAACATCTCTGAGTCAGCCGAACAACATAGAGATTTCA ATGCACATTAAGCTTTCCAAAAGAAACCACTTCTCCAACCTTCATAATCCAAACAACAACCAACCCTTTCTAGAAATTAAGATGAAGGCTGTTACCGGCGAGTCGAGTGAGCTAAAGAGTTCCAAACTCAAACCAGGGGTGAACCGCGGTTTATCGATATTCGATTTCATCCTAAGGTTGGCAGCCATTGTTGGAGCCTTAGGAAGTGCAATAGCTATGGGAACAACCACCCAGACTCTTCCATTTGCCACACAGTTTATTCAGTTTAGAGCTGAGTATAATGATCTTCCTATGTTTACCTTCTTTGTTGTAGCCTGCGCCATTGTAAGTGGCTACTTGGTTCTATCTCTGCCTCTTTCTATATTCCACATCTTGAGGAGCAGAGCACGTGCGACAAGGGTTGTGTTGGTATTCTTGGACGCTGGAATGATGGCTCTTTTGACATCTGGGGCTTCTGCAGCGGCAGCCATTGTGTACTTAGCACACAAAGGAAATGGCAAGACAAATTGGCTAGCTATCTGCCAGCAATTTAACTCATTTTGCGAGCGAACCTCTGGCTCTTTGATCGGATCTTTTGTAGCAATTGTTCTACTTATGATTATGATTTTCCTGTCTGGTGCAGCATTGTCTCGTCGCCGTTGA MHIKLSKRNHFSNLHNPNNNQPFLEIKMKAVTGESSELKSSKLKPGVNRGLSIFDFILRLAAIVGALGSAIAMGTTTQTLPFATQFIQFRAEYNDLPMFTFFVVACAIVSGYLVLSLPLSIFHILRSRARATRVVLVFLDAGMMALLTSGASAAAAIVYLAHKGNGKTNWLAICQQFNSFCERTSGSLIGSFVAIVLLMIMIFLSGAALSRRR Homology
BLAST of MELO3C022001 vs. NCBI nr
Match: XP_008459331.1 (PREDICTED: casparian strip membrane protein 1 [Cucumis melo]) HSP 1 Score: 400.2 bits (1027), Expect = 1.1e-107 Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0
BLAST of MELO3C022001 vs. NCBI nr
Match: KAA0039465.1 (casparian strip membrane protein 1 [Cucumis melo var. makuwa] >TYK00655.1 casparian strip membrane protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 342.0 bits (876), Expect = 3.6e-90 Identity = 185/186 (99.46%), Postives = 185/186 (99.46%), Query Frame = 0
BLAST of MELO3C022001 vs. NCBI nr
Match: XP_004141446.1 (casparian strip membrane protein 1 [Cucumis sativus] >XP_031742301.1 casparian strip membrane protein 1 [Cucumis sativus] >KGN52473.1 hypothetical protein Csa_008099 [Cucumis sativus]) HSP 1 Score: 337.8 bits (865), Expect = 6.8e-89 Identity = 182/185 (98.38%), Postives = 183/185 (98.92%), Query Frame = 0
BLAST of MELO3C022001 vs. NCBI nr
Match: XP_038889645.1 (casparian strip membrane protein 1 [Benincasa hispida]) HSP 1 Score: 322.8 bits (826), Expect = 2.3e-84 Identity = 174/186 (93.55%), Postives = 179/186 (96.24%), Query Frame = 0
BLAST of MELO3C022001 vs. NCBI nr
Match: KAG7033177.1 (hypothetical protein SDJN02_07231, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 307.4 bits (786), Expect = 9.8e-80 Identity = 163/187 (87.17%), Postives = 170/187 (90.91%), Query Frame = 0
BLAST of MELO3C022001 vs. ExPASy Swiss-Prot
Match: A7PMY7 (Casparian strip membrane protein 3 OS=Vitis vinifera OX=29760 GN=VIT_14s0108g01050 PE=3 SV=1) HSP 1 Score: 235.7 bits (600), Expect = 4.7e-61 Identity = 125/179 (69.83%), Postives = 147/179 (82.12%), Query Frame = 0
BLAST of MELO3C022001 vs. ExPASy Swiss-Prot
Match: A2YAZ1 (Casparian strip membrane protein 3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_22263 PE=2 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 1.8e-60 Identity = 120/179 (67.04%), Postives = 149/179 (83.24%), Query Frame = 0
BLAST of MELO3C022001 vs. ExPASy Swiss-Prot
Match: Q67X40 (Casparian strip membrane protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0231050 PE=3 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 1.8e-60 Identity = 120/179 (67.04%), Postives = 149/179 (83.24%), Query Frame = 0
BLAST of MELO3C022001 vs. ExPASy Swiss-Prot
Match: P0DI44 (Casparian strip membrane protein 1 OS=Solanum tuberosum OX=4113 PE=2 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 1.2e-59 Identity = 118/173 (68.21%), Postives = 143/173 (82.66%), Query Frame = 0
BLAST of MELO3C022001 vs. ExPASy Swiss-Prot
Match: P0DI54 (Casparian strip membrane protein 1 OS=Malus domestica OX=3750 PE=2 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 2.6e-59 Identity = 117/175 (66.86%), Postives = 142/175 (81.14%), Query Frame = 0
BLAST of MELO3C022001 vs. ExPASy TrEMBL
Match: A0A1S3C9W9 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498495 PE=3 SV=1) HSP 1 Score: 400.2 bits (1027), Expect = 5.4e-108 Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0
BLAST of MELO3C022001 vs. ExPASy TrEMBL
Match: A0A5D3BNI0 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002770 PE=3 SV=1) HSP 1 Score: 342.0 bits (876), Expect = 1.7e-90 Identity = 185/186 (99.46%), Postives = 185/186 (99.46%), Query Frame = 0
BLAST of MELO3C022001 vs. ExPASy TrEMBL
Match: A0A0A0KSC5 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G636650 PE=3 SV=1) HSP 1 Score: 337.8 bits (865), Expect = 3.3e-89 Identity = 182/185 (98.38%), Postives = 183/185 (98.92%), Query Frame = 0
BLAST of MELO3C022001 vs. ExPASy TrEMBL
Match: A0A6J1GRF2 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111456446 PE=3 SV=1) HSP 1 Score: 305.8 bits (782), Expect = 1.4e-79 Identity = 162/187 (86.63%), Postives = 169/187 (90.37%), Query Frame = 0
BLAST of MELO3C022001 vs. ExPASy TrEMBL
Match: A0A6J1JTR2 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487433 PE=3 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 5.2e-79 Identity = 161/187 (86.10%), Postives = 168/187 (89.84%), Query Frame = 0
BLAST of MELO3C022001 vs. TAIR 10
Match: AT5G15290.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 217.2 bits (552), Expect = 1.2e-56 Identity = 116/186 (62.37%), Postives = 143/186 (76.88%), Query Frame = 0
BLAST of MELO3C022001 vs. TAIR 10
Match: AT3G11550.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 195.7 bits (496), Expect = 3.9e-50 Identity = 99/166 (59.64%), Postives = 129/166 (77.71%), Query Frame = 0
BLAST of MELO3C022001 vs. TAIR 10
Match: AT5G06200.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 192.2 bits (487), Expect = 4.3e-49 Identity = 100/166 (60.24%), Postives = 126/166 (75.90%), Query Frame = 0
BLAST of MELO3C022001 vs. TAIR 10
Match: AT1G14160.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 180.6 bits (457), Expect = 1.3e-45 Identity = 94/187 (50.27%), Postives = 136/187 (72.73%), Query Frame = 0
BLAST of MELO3C022001 vs. TAIR 10
Match: AT2G27370.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 171.4 bits (433), Expect = 7.8e-43 Identity = 92/174 (52.87%), Postives = 118/174 (67.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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