MELO3C021994 (gene) Melon (DHL92) v4

Overview
NameMELO3C021994
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionWall-associated receptor kinase 2-like
Locationchr09: 2056099 .. 2056426 (+)
RNA-Seq ExpressionMELO3C021994
SyntenyMELO3C021994
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAAATTACCAGAATCCAGTGACATTGGGTAAGCTTTTCAGATGGGACTGTGGCGACGCACGCGGTTATGAAGAATCAACGGATTCGATGGTGAAGATTCGATGAAGGGGTTCTTCGGCAGAGGCGTTCTTCGACGTTCTTCAGTGCAGGGGTCGTGATTCTTCGAATTCTTCAGCGTTATTCGGCAGAGGAGTCATGGGTCGACAACGTTCTTCGCCAGAGGGGTTCTTTGTCGGAGGGGTTTTCGTCGGAGGGGTTTTCGACAGTTCAACACAGTGTGGGGGCATGGGTCTTTGGGAGAGAGATGGGAGTGAGGGGCGCGTGA

mRNA sequence

ATGCCAAATTACCAGAATCCAGTGACATTGGGGGTCGTGATTCTTCGAATTCTTCAGCGTTATTCGGCAGAGGAGTCATGGGTCGACAACGTTCTTCGCCAGAGGGGTTCTTTGTCGGAGGGGTTTTCGTCGGAGGGGTTTTCGACAGTTCAACACAGTGTGGGGGCATGGGTCTTTGGGAGAGAGATGGGAGTGAGGGGCGCGTGA

Coding sequence (CDS)

ATGCCAAATTACCAGAATCCAGTGACATTGGGGGTCGTGATTCTTCGAATTCTTCAGCGTTATTCGGCAGAGGAGTCATGGGTCGACAACGTTCTTCGCCAGAGGGGTTCTTTGTCGGAGGGGTTTTCGTCGGAGGGGTTTTCGACAGTTCAACACAGTGTGGGGGCATGGGTCTTTGGGAGAGAGATGGGAGTGAGGGGCGCGTGA

Protein sequence

MPNYQNPVTLGVVILRILQRYSAEESWVDNVLRQRGSLSEGFSSEGFSTVQHSVGAWVFGREMGVRGA
Homology
BLAST of MELO3C021994 vs. NCBI nr
Match: TYK23263.1 (wall-associated receptor kinase 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 93.6 bits (231), Expect = 7.1e-16
Identity = 44/54 (81.48%), Postives = 50/54 (92.59%), Query Frame = 0

Query: 11 GVVILRILQRYSAEESWVDNVLRQRGSLSEGFSSEGFSTVQHSVGAWVFGREMG 65
          GV++LR+L RYSAEESWVDNVL++RGSL EGFSSEGFS V+HSVGAWVF REMG
Sbjct: 15 GVMVLRVLWRYSAEESWVDNVLQRRGSLPEGFSSEGFSPVRHSVGAWVFVREMG 68

BLAST of MELO3C021994 vs. NCBI nr
Match: XP_008448103.1 (PREDICTED: wall-associated receptor kinase 2-like [Cucumis melo])

HSP 1 Score: 72.8 bits (177), Expect = 1.3e-09
Identity = 33/44 (75.00%), Postives = 41/44 (93.18%), Query Frame = 0

Query: 11 GVVILRILQRYSAEESWVDNVLRQRGSLSEGFSSEGFSTVQHSV 55
          GV++LR+L RYSAEESWVDNVL++RGSL EGFSSEGFS V+H++
Sbjct: 15 GVMVLRVLWRYSAEESWVDNVLQRRGSLPEGFSSEGFSPVRHNL 58

BLAST of MELO3C021994 vs. NCBI nr
Match: KAA0039486.1 (wall-associated receptor kinase 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 58.2 bits (139), Expect = 3.3e-05
Identity = 28/32 (87.50%), Postives = 30/32 (93.75%), Query Frame = 0

Query: 11 GVVILRILQRYSAEESWVDNVLRQRGSLSEGF 43
          GVVILRILQRYSAEESWV+NVLR+RGS  EGF
Sbjct: 15 GVVILRILQRYSAEESWVENVLRRRGSSVEGF 46

BLAST of MELO3C021994 vs. NCBI nr
Match: KAA0035640.1 (wall-associated receptor kinase 2-like [Cucumis melo var. makuwa] >TYK30902.1 wall-associated receptor kinase 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 57.0 bits (136), Expect = 7.4e-05
Identity = 32/55 (58.18%), Postives = 36/55 (65.45%), Query Frame = 0

Query: 11 GVVILRILQRYSAEESWVDNVLRQRGSLSEGFSSEGFS-TVQHSVGAWVFGREMG 65
          GVV+LR+LQ  S EESWVDNVLR+RG  SEGF  E  S  +QH    WV G   G
Sbjct: 42 GVVVLRVLQHSSTEESWVDNVLRRRGPSSEGFFDERNSLAIQHR--RWVVGLYQG 94

BLAST of MELO3C021994 vs. ExPASy TrEMBL
Match: A0A5D3DI48 (Wall-associated receptor kinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G003160 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.4e-16
Identity = 44/54 (81.48%), Postives = 50/54 (92.59%), Query Frame = 0

Query: 11 GVVILRILQRYSAEESWVDNVLRQRGSLSEGFSSEGFSTVQHSVGAWVFGREMG 65
          GV++LR+L RYSAEESWVDNVL++RGSL EGFSSEGFS V+HSVGAWVF REMG
Sbjct: 15 GVMVLRVLWRYSAEESWVDNVLQRRGSLPEGFSSEGFSPVRHSVGAWVFVREMG 68

BLAST of MELO3C021994 vs. ExPASy TrEMBL
Match: A0A1S3BIX4 (wall-associated receptor kinase 2-like OS=Cucumis melo OX=3656 GN=LOC103490390 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 6.3e-10
Identity = 33/44 (75.00%), Postives = 41/44 (93.18%), Query Frame = 0

Query: 11 GVVILRILQRYSAEESWVDNVLRQRGSLSEGFSSEGFSTVQHSV 55
          GV++LR+L RYSAEESWVDNVL++RGSL EGFSSEGFS V+H++
Sbjct: 15 GVMVLRVLWRYSAEESWVDNVLQRRGSLPEGFSSEGFSPVRHNL 58

BLAST of MELO3C021994 vs. ExPASy TrEMBL
Match: A0A5A7TBT0 (Wall-associated receptor kinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G003060 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.6e-05
Identity = 28/32 (87.50%), Postives = 30/32 (93.75%), Query Frame = 0

Query: 11 GVVILRILQRYSAEESWVDNVLRQRGSLSEGF 43
          GVVILRILQRYSAEESWV+NVLR+RGS  EGF
Sbjct: 15 GVVILRILQRYSAEESWVENVLRRRGSSVEGF 46

BLAST of MELO3C021994 vs. ExPASy TrEMBL
Match: A0A5D3E4P7 (Wall-associated receptor kinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G001110 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.6e-05
Identity = 32/55 (58.18%), Postives = 36/55 (65.45%), Query Frame = 0

Query: 11 GVVILRILQRYSAEESWVDNVLRQRGSLSEGFSSEGFS-TVQHSVGAWVFGREMG 65
          GVV+LR+LQ  S EESWVDNVLR+RG  SEGF  E  S  +QH    WV G   G
Sbjct: 42 GVVVLRVLQHSSTEESWVDNVLRRRGPSSEGFFDERNSLAIQHR--RWVVGLYQG 94

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK23263.17.1e-1681.48wall-associated receptor kinase 2-like [Cucumis melo var. makuwa][more]
XP_008448103.11.3e-0975.00PREDICTED: wall-associated receptor kinase 2-like [Cucumis melo][more]
KAA0039486.13.3e-0587.50wall-associated receptor kinase 2-like [Cucumis melo var. makuwa][more]
KAA0035640.17.4e-0558.18wall-associated receptor kinase 2-like [Cucumis melo var. makuwa] >TYK30902.1 wa... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DI483.4e-1681.48Wall-associated receptor kinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A1S3BIX46.3e-1075.00wall-associated receptor kinase 2-like OS=Cucumis melo OX=3656 GN=LOC103490390 P... [more]
A0A5A7TBT01.6e-0587.50Wall-associated receptor kinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A5D3E4P73.6e-0558.18Wall-associated receptor kinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C021994.1MELO3C021994.1mRNA