MELO3C021991 (gene) Melon (DHL92) v4

Overview


Name	MELO3C021991
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	E3 ubiquitin-protein ligase RING1-like
Location	chr09: 2090379 .. 2091726 (-)
RNA-Seq Expression	MELO3C021991
Synteny	MELO3C021991

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGTTGACATTAACATTGTCATCCACCCAAAATAATTAAACAACCAAACCAAGTGGACGAATGAATTACAATGACACAAATACAAAAATAATATATAACAAAATTTAAAAAATAGATATAGATATATTATTAATAAGCGTAAAGAATAAAGCGTAGACTTCCCGTGTGTTTTCCCACCGGCATCAAAATAAATGGGACCGACCTTACCGGCGTCCGGTGGTGGCCCGTCACGTCGGTCACCGTGTCTTCCCACCCCTTGAACCTCATCATCATCGTCGTCATCATCATCTTAGAATTTTCTTCCAGAATCTTCTCACCTCTTCGCCATGGCCGCCTTCTTCCTTTCTCCATTCATATAATACCCTTTTTTTTCTTTTTCTTCAATCCTATTTGATCTCTTCCCTTTTCCTCTATTTCCTCTCTAAACGACCATGTCTGATTCCGATTCTTCTCCCTCTCCTTCACCGCCACCGCCTCCGCGAACCCTTTCTATGCTTCTCCCTTTTCTCCTTGGCCTTGCTCGAACCACCACCGGATCCAACCTCAACCAGATCGTCGTTCTCGACCATGCTGCTCGAACGGTTGTCGTTTTCGAAGGACACGTTCTTGACTCTCTTCTTCGTGACTTATCGGAGAAATCTGGGCCCTTGCCGGCGTCCAAGGCTTCGATCGATGCGATGCCCAGAGTTGGGGTTACGGAATTGGGGACAGATTGTGCGATTTGCTTGGATGGATTTGAAGTCGCCGAGGAAGCCAGGGAGATGCCGTGTAAACATATGTATCATTCTGATTGTATTGAGAAATGGTTGAATGTTCGTGGAACGTGTCCGGTTTGTCGGTTCGTGATGCCGGTGGATGATCGGAGAAAGGACGGTGGTGTTGGTGGTGGTGATGTTGAAGAAGATGAAGATATGGAAGGTGGAGAAAGTGGAGAAGGACGGGTGGTTGTAGTTAATTTGTGGGTTAACGATGGTGAACCGATGGATGTTGAGTCGGGATTGGAACATGGATCAGAGGATTCCGATTCAGAATCACAAGATGAAATTATGGTTGAAGTTGATGGCTCATCAACACAAGAACAAGATCCAAGTTCTGAAGATTCTTCTTCATTTTCATTTTCGTCTTTTTTCAACTAGTTATTTTTTTTCTTTGATTTGATAGGCTTTTCTGGAAATGTCATTGTTTGATTATTTACGGCCAATTACTTACTACAAACCCTCAGCTTTAAAAGTCCAAATTTGGCCATTCATGAATTTTTTTTTTCTTCTTCTGGGATTTGGCAAGTTTTGAAGTTGTAAATAATGAATCAGTTCATGAAGTTTGATTATATATGAAAATCCCTTTTCTT

mRNA sequence

TAGTTGACATTAACATTGTCATCCACCCAAAATAATTAAACAACCAAACCAAGTGGACGAATGAATTACAATGACACAAATACAAAAATAATATATAACAAAATTTAAAAAATAGATATAGATATATTATTAATAAGCGTAAAGAATAAAGCGTAGACTTCCCGTGTGTTTTCCCACCGGCATCAAAATAAATGGGACCGACCTTACCGGCGTCCGGTGGTGGCCCGTCACGTCGGTCACCGTGTCTTCCCACCCCTTGAACCTCATCATCATCGTCGTCATCATCATCTTAGAATTTTCTTCCAGAATCTTCTCACCTCTTCGCCATGGCCGCCTTCTTCCTTTCTCCATTCATATAATACCCTTTTTTTTCTTTTTCTTCAATCCTATTTGATCTCTTCCCTTTTCCTCTATTTCCTCTCTAAACGACCATGTCTGATTCCGATTCTTCTCCCTCTCCTTCACCGCCACCGCCTCCGCGAACCCTTTCTATGCTTCTCCCTTTTCTCCTTGGCCTTGCTCGAACCACCACCGGATCCAACCTCAACCAGATCGTCGTTCTCGACCATGCTGCTCGAACGGTTGTCGTTTTCGAAGGACACGTTCTTGACTCTCTTCTTCGTGACTTATCGGAGAAATCTGGGCCCTTGCCGGCGTCCAAGGCTTCGATCGATGCGATGCCCAGAGTTGGGGTTACGGAATTGGGGACAGATTGTGCGATTTGCTTGGATGGATTTGAAGTCGCCGAGGAAGCCAGGGAGATGCCGTGTAAACATATGTATCATTCTGATTGTATTGAGAAATGGTTGAATGTTCGTGGAACGTGTCCGGTTTGTCGGTTCGTGATGCCGGTGGATGATCGGAGAAAGGACGGTGGTGTTGGTGGTGGTGATGTTGAAGAAGATGAAGATATGGAAGGTGGAGAAAGTGGAGAAGGACGGGTGGTTGTAGTTAATTTGTGGGTTAACGATGGTGAACCGATGGATGTTGAGTCGGGATTGGAACATGGATCAGAGGATTCCGATTCAGAATCACAAGATGAAATTATGGTTGAAGTTGATGGCTCATCAACACAAGAACAAGATCCAAGTTCTGAAGATTCTTCTTCATTTTCATTTTCGTCTTTTTTCAACTAGTTATTTTTTTTCTTTGATTTGATAGGCTTTTCTGGAAATGTCATTGTTTGATTATTTACGGCCAATTACTTACTACAAACCCTCAGCTTTAAAAGTCCAAATTTGGCCATTCATGAATTTTTTTTTTCTTCTTCTGGGATTTGGCAAGTTTTGAAGTTGTAAATAATGAATCAGTTCATGAAGTTTGATTATATATGAAAATCCCTTTTCTT

Coding sequence (CDS)

ATGTCTGATTCCGATTCTTCTCCCTCTCCTTCACCGCCACCGCCTCCGCGAACCCTTTCTATGCTTCTCCCTTTTCTCCTTGGCCTTGCTCGAACCACCACCGGATCCAACCTCAACCAGATCGTCGTTCTCGACCATGCTGCTCGAACGGTTGTCGTTTTCGAAGGACACGTTCTTGACTCTCTTCTTCGTGACTTATCGGAGAAATCTGGGCCCTTGCCGGCGTCCAAGGCTTCGATCGATGCGATGCCCAGAGTTGGGGTTACGGAATTGGGGACAGATTGTGCGATTTGCTTGGATGGATTTGAAGTCGCCGAGGAAGCCAGGGAGATGCCGTGTAAACATATGTATCATTCTGATTGTATTGAGAAATGGTTGAATGTTCGTGGAACGTGTCCGGTTTGTCGGTTCGTGATGCCGGTGGATGATCGGAGAAAGGACGGTGGTGTTGGTGGTGGTGATGTTGAAGAAGATGAAGATATGGAAGGTGGAGAAAGTGGAGAAGGACGGGTGGTTGTAGTTAATTTGTGGGTTAACGATGGTGAACCGATGGATGTTGAGTCGGGATTGGAACATGGATCAGAGGATTCCGATTCAGAATCACAAGATGAAATTATGGTTGAAGTTGATGGCTCATCAACACAAGAACAAGATCCAAGTTCTGAAGATTCTTCTTCATTTTCATTTTCGTCTTTTTTCAACTAG

Protein sequence

MSDSDSSPSPSPPPPPRTLSMLLPFLLGLARTTTGSNLNQIVVLDHAARTVVVFEGHVLDSLLRDLSEKSGPLPASKASIDAMPRVGVTELGTDCAICLDGFEVAEEAREMPCKHMYHSDCIEKWLNVRGTCPVCRFVMPVDDRRKDGGVGGGDVEEDEDMEGGESGEGRVVVVNLWVNDGEPMDVESGLEHGSEDSDSESQDEIMVEVDGSSTQEQDPSSEDSSSFSFSSFFN

Homology

[Close]

BLAST of MELO3C021991 vs. NCBI nr
Match: KAA0039492.1 (E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa] >TYK15247.1 E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa])

HSP 1 Score: 457.6 bits (1176), Expect = 6.4e-125
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0


Query: 1   MSDSDSSPSPSPPPPPRTLSMLLPFLLGLARTTTGSNLNQIVVLDHAARTVVVFEGHVLD 60
           MSDSDSSPSPSPPPPPRTLSMLLPFLLGLARTTTGSNLNQIVVLDHAARTVVVFEGHVLD
Sbjct: 1   MSDSDSSPSPSPPPPPRTLSMLLPFLLGLARTTTGSNLNQIVVLDHAARTVVVFEGHVLD 60

Query: 61  SLLRDLSEKSGPLPASKASIDAMPRVGVTELGTDCAICLDGFEVAEEAREMPCKHMYHSD 120
           SLLRDLSEKSGPLPASKASIDAMPRVGVTELGTDCAICLDGFEVAEEAREMPCKHMYHSD
Sbjct: 61  SLLRDLSEKSGPLPASKASIDAMPRVGVTELGTDCAICLDGFEVAEEAREMPCKHMYHSD 120

Query: 121 CIEKWLNVRGTCPVCRFVMPVDDRRKDGGVGGGDVEEDEDMEGGESGEGRVVVVNLWVND 180
           CIEKWLNVRGTCPVCRFVMPVDDRRKDGGVGGGDVEEDEDMEGGESGEGRVVVVNLWVND
Sbjct: 121 CIEKWLNVRGTCPVCRFVMPVDDRRKDGGVGGGDVEEDEDMEGGESGEGRVVVVNLWVND 180

Query: 181 GEPMDVESGLEHGSEDSDSESQDEIMVEVDGSSTQEQDPSSEDSSSFSFSSFFN 235
           GEPMDVESGLEHGSEDSDSESQDEIMVEVDGSSTQEQDPSSEDSSSFSFSSFFN
Sbjct: 181 GEPMDVESGLEHGSEDSDSESQDEIMVEVDGSSTQEQDPSSEDSSSFSFSSFFN 234

[Close]

BLAST of MELO3C021991 vs. NCBI nr
Match: XP_008459699.1 (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo])

HSP 1 Score: 435.6 bits (1119), Expect = 2.6e-118
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MSDSDSSPSPSPPPPPRTLSMLLPFLLGLARTTTGSNLNQIVVLDHAARTVVVFEGHVLD 60
           MSDSDSSPSPSPPPPPRTLSMLLPFLLGLARTTTGSNLNQIVVLDHAARTVVVFEGHVLD
Sbjct: 1   MSDSDSSPSPSPPPPPRTLSMLLPFLLGLARTTTGSNLNQIVVLDHAARTVVVFEGHVLD 60

Query: 61  SLLRDLSEKSGPLPASKASIDAMPRVGVTELGTDCAICLDGFEVAEEAREMPCKHMYHSD 120
           SLLRDLSEKSGPLPASKASIDAMPRVGVTELGTDCAICLDGFEVAEEAREMPCKHMYHSD
Sbjct: 61  SLLRDLSEKSGPLPASKASIDAMPRVGVTELGTDCAICLDGFEVAEEAREMPCKHMYHSD 120

Query: 121 CIEKWLNVRGTCPVCRFVMPVDDRRKDGGVGGGDVEEDEDMEGGESGEGRVVVVNLWVND 180
           CIEKWLNVRGTCPVCRFVMPVDDRRKDGGVGGGDVEEDEDMEGGESGEGRVVVVNLWVND
Sbjct: 121 CIEKWLNVRGTCPVCRFVMPVDDRRKDGGVGGGDVEEDEDMEGGESGEGRVVVVNLWVND 180

Query: 181 GEPMDVESGLEHGSEDSDSESQDEIMVEVDGSSTQEQDPS 221
           GEPMDVESGLEHGSEDSDSESQDEIMVEVDGSSTQEQDPS
Sbjct: 181 GEPMDVESGLEHGSEDSDSESQDEIMVEVDGSSTQEQDPS 220

[Close]

BLAST of MELO3C021991 vs. NCBI nr
Match: XP_011656279.1 (E3 ubiquitin-protein ligase MPSR1 [Cucumis sativus] >KGN52465.1 hypothetical protein Csa_008626 [Cucumis sativus])

HSP 1 Score: 428.3 bits (1100), Expect = 4.2e-116
Identity = 227/240 (94.58%), Postives = 228/240 (95.00%), Query Frame = 0


Query: 1   MSDSDSSPSPSPPPPPRTLSMLLPFLLGLARTTTGSNLNQIVVLDHAARTVVVFEGHVLD 60
           MSDSDSSPSPSPPPPPRTLSMLLPFLLGLARTTTGSNLNQIVVLDHAARTVVVFEGHVLD
Sbjct: 1   MSDSDSSPSPSPPPPPRTLSMLLPFLLGLARTTTGSNLNQIVVLDHAARTVVVFEGHVLD 60

Query: 61  SLLRDLSEKSGPLPASKASIDAMPRVGVTELGTDCAICLDGFEVAEEAREMPCKHMYHSD 120
           SLLRDLSEKSGPLPASKASIDAMPRVGVTELG DCAICLDGFEV EEAREMPCKHMYHSD
Sbjct: 61  SLLRDLSEKSGPLPASKASIDAMPRVGVTELGMDCAICLDGFEVDEEAREMPCKHMYHSD 120

Query: 121 CIEKWLNVRGTCPVCRFVMPVDDRRKD-GGVGGGDVEEDEDM---EGGESGEGRVVVVNL 180
           CIEKWLNVRGTCPVCRF MPVDDRRKD GG GGGD EE+EDM   EGGE GEGRVVVVNL
Sbjct: 121 CIEKWLNVRGTCPVCRFAMPVDDRRKDGGGGGGGDEEEEEDMEGGEGGEGGEGRVVVVNL 180

Query: 181 WVNDGEPMDVESGLEHGSEDSDSESQDEIMVEVDGSST--QEQDPSSEDSSSFSFSSFFN 235
           WVNDGEPMDVESGLEHGSEDSDSESQDEIMVEVDGSST  QEQDPSSEDSSSFSFSSFFN
Sbjct: 181 WVNDGEPMDVESGLEHGSEDSDSESQDEIMVEVDGSSTQEQEQDPSSEDSSSFSFSSFFN 240

[Close]

BLAST of MELO3C021991 vs. NCBI nr
Match: XP_022993365.1 (E3 ubiquitin-protein ligase RNF181-like [Cucurbita maxima])

HSP 1 Score: 363.6 bits (932), Expect = 1.3e-96
Identity = 197/238 (82.77%), Postives = 205/238 (86.13%), Query Frame = 0


Query: 1   MSDSDSSPSPSPP-PPPRTLSMLLPFLLGLARTTTGSNLNQIVVLDHAARTVVVFEGHVL 60
           MSDSDSS SP P  PPPR+LSMLLPFLLGLARTT GS+LNQIVVLDHAARTVVVFEGHVL
Sbjct: 1   MSDSDSSSSPPPSLPPPRSLSMLLPFLLGLARTTPGSHLNQIVVLDHAARTVVVFEGHVL 60

Query: 61  DSLLRDLSEKSGPLPASKASIDAMPRVGVTELGTDCAICLDGFEVAEEAREMPCKHMYHS 120
           +S LRDLSEKSGPLPASKASIDAMPRVG+TELG DCAICLDGFEV  EAREMPCKHMYHS
Sbjct: 61  ESFLRDLSEKSGPLPASKASIDAMPRVGITELGMDCAICLDGFEVGAEAREMPCKHMYHS 120

Query: 121 DCIEKWLNVRGTCPVCRFVMPVDDRRKDGGVGGGDVEEDEDMEGGESGEGRVVVVNLWVN 180
           DCIEKWL VRGTCP+CRF MPVDD+        G  ++DEDMEG    EGRVVVVNLWVN
Sbjct: 121 DCIEKWLRVRGTCPICRFTMPVDDQE-------GKKDDDEDMEG---DEGRVVVVNLWVN 180

Query: 181 DGEPMD---VESGLEHGSEDSDSESQDEIMVEVDGSSTQEQDPSSEDSSSFSFSSFFN 235
           DGEPMD   VESGL HGS DSDSES DEI VEVD SSTQEQDPSSEDSSSFSFSSFFN
Sbjct: 181 DGEPMDVESVESGLGHGSGDSDSESHDEITVEVDASSTQEQDPSSEDSSSFSFSSFFN 228

[Close]

BLAST of MELO3C021991 vs. NCBI nr
Match: XP_023551536.1 (E3 ubiquitin-protein ligase RNF181-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 362.5 bits (929), Expect = 2.8e-96
Identity = 196/238 (82.35%), Postives = 205/238 (86.13%), Query Frame = 0


Query: 1   MSDSDSSPSPSPP-PPPRTLSMLLPFLLGLARTTTGSNLNQIVVLDHAARTVVVFEGHVL 60
           MSDSDSS SP P  PPPR+LSMLLPFLLGLARTT GS+LNQIVVLDHAARTVVVFEGHVL
Sbjct: 1   MSDSDSSSSPPPSLPPPRSLSMLLPFLLGLARTTPGSHLNQIVVLDHAARTVVVFEGHVL 60

Query: 61  DSLLRDLSEKSGPLPASKASIDAMPRVGVTELGTDCAICLDGFEVAEEAREMPCKHMYHS 120
           +S LRDLSEKSGPLPASKASIDAMPRVG+TELG DCAICLDGFEV  EAREMPCKH+YHS
Sbjct: 61  ESFLRDLSEKSGPLPASKASIDAMPRVGITELGMDCAICLDGFEVGAEAREMPCKHLYHS 120

Query: 121 DCIEKWLNVRGTCPVCRFVMPVDDRRKDGGVGGGDVEEDEDMEGGESGEGRVVVVNLWVN 180
           DCIEKWL VRGTCP+CRF MPVDD+        G  ++DEDMEG    EGRVVVVNLWVN
Sbjct: 121 DCIEKWLRVRGTCPICRFTMPVDDQE-------GKKDDDEDMEG---DEGRVVVVNLWVN 180

Query: 181 DGEPMD---VESGLEHGSEDSDSESQDEIMVEVDGSSTQEQDPSSEDSSSFSFSSFFN 235
           DGEPMD   VESGL HGS DSDSES DEI VEVD SSTQEQDPSSEDSSSFSFSSFFN
Sbjct: 181 DGEPMDVESVESGLGHGSGDSDSESHDEITVEVDASSTQEQDPSSEDSSSFSFSSFFN 228

[Close]

BLAST of MELO3C021991 vs. ExPASy Swiss-Prot
Match: Q9LQX2 (E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.9e-23
Identity = 69/191 (36.13%), Postives = 99/191 (51.83%), Query Frame = 0


Query: 17  RTLSMLLPFLLGLARTTT--------GSNLNQIVVLDHAARTVVVFEGHV-LDSLLRDL- 76
           R L + LPFLLG +   +         S+  +I++++   + ++V EG   ++ LLR L 
Sbjct: 24  RDLYLFLPFLLGFSDQESSNGDDDDVASSRERIILVNPFTQGMIVLEGSSGMNPLLRSLL 83

Query: 77  -SEKSGPLPASKASIDAMPRVGVTELGTDCAICLDGFEVAEEAREMPCKHMYHSDCIEKW 136
            S + G  PASKASIDAMP V +     +C ICL+ ++  E  +EMPCKH +H  CIEKW
Sbjct: 84  ESREEGRPPASKASIDAMPIVEIDGCEGECVICLEEWKSEETVKEMPCKHRFHGGCIEKW 143

Query: 137 LNVRGTCPVCRFVMPVDDRRKDGGVGGGDVEEDEDMEGGESGEGRVVVVNLWVNDGEPMD 196
           L   G+CPVCR+ MPVD                 D  G +  +G  + V    NDG  + 
Sbjct: 144 LGFHGSCPVCRYEMPVDG----------------DEIGKKRNDGNEIWVRFSFNDGRRIR 198

[Close]

BLAST of MELO3C021991 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.3e-19
Identity = 48/114 (42.11%), Postives = 68/114 (59.65%), Query Frame = 0


Query: 54  FEGHVLDSLLRDLSE----KSGPLPASKASIDAMPRVGVTE-----LGTDCAICLDGFEV 113
           F G  L+ L++ L+E    + G  PASK++IDA+P V VT+         CA+C+D FE 
Sbjct: 166 FFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFED 225

Query: 114 AEEAREMPCKHMYHSDCIEKWLNVRGTCPVCRFVMPVDD----RRKDGGVGGGD 155
             + ++MPCKH++H DC+  WL +  +CPVCRF +P DD     R  G  G GD
Sbjct: 226 GSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENRSQGSQGSGD 279

[Close]

BLAST of MELO3C021991 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.7e-19
Identity = 53/132 (40.15%), Postives = 75/132 (56.82%), Query Frame = 0


Query: 54  FEGHVLDSLLRDLSE----KSGPLPASKASIDAMPRVGVTELG-----TDCAICLDGFEV 113
           F G  L+ L++ L+E    + G  PASK++I+A+P V +T+         CA+C+D FE 
Sbjct: 174 FIGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEE 233

Query: 114 AEEAREMPCKHMYHSDCIEKWLNVRGTCPVCRFVMPVDD---RRKDGGVGGGDVEEDEDM 173
             EA++MPCKH+YH DC+  WL +  +CPVCR  +P DD    R+  G  G     D D 
Sbjct: 234 GTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTDDPDYERRVRGAQGTSGGNDGDN 293

[Close]

BLAST of MELO3C021991 vs. ExPASy Swiss-Prot
Match: Q9SNB6 (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.9e-19
Identity = 44/103 (42.72%), Postives = 65/103 (63.11%), Query Frame = 0


Query: 53  VFEGHVLDSLLRDLSE---------KSGPLPASKASIDAMPRVGVTELGT----DCAICL 112
           +  G   + LL  LS+         +SG  PASK++I+++PRV +++  T    +CA+C 
Sbjct: 160 ILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAIESLPRVEISDCHTKAEANCAVCT 219

Query: 113 DGFEVAEEAREMPCKHMYHSDCIEKWLNVRGTCPVCRFVMPVD 143
           + FE   E REMPCKH++H DCI  WL++R +CPVCRF +P D
Sbjct: 220 EVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCRFELPSD 262

[Close]

BLAST of MELO3C021991 vs. ExPASy Swiss-Prot
Match: Q940T5 (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.4e-18
Identity = 56/150 (37.33%), Postives = 84/150 (56.00%), Query Frame = 0


Query: 53  VFEGHVLDSLLRDLSE---------KSGPLPASKASIDAMPRVGVTE--LGTD--CAICL 112
           +  G   + LL  LS+         +SG  PASK++I+++PRV +++  +G++  CA+C 
Sbjct: 144 ILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESLPRVEISDCHIGSEANCAVCT 203

Query: 113 DGFEVAEEAREMPCKHMYHSDCIEKWLNVRGTCPVCRFVMPVDDRRKDGGVGGGDVEEDE 172
           + FE   EAREMPCKH++H DCI  WL++R +CPVCRF +P +  R+       + EED 
Sbjct: 204 EIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPSEPNRR-----SNNNEEDN 263

Query: 173 -------DMEGGESGEGRVVVVNLWVNDGE 183
                   + GG    GR    N  + DGE
Sbjct: 264 AVGMTIWRLPGGGFAVGR---FNAAMRDGE 285

[Close]

BLAST of MELO3C021991 vs. ExPASy TrEMBL
Match: A0A5A7T7P7 (E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00210 PE=4 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 3.1e-125
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0


Query: 1   MSDSDSSPSPSPPPPPRTLSMLLPFLLGLARTTTGSNLNQIVVLDHAARTVVVFEGHVLD 60
           MSDSDSSPSPSPPPPPRTLSMLLPFLLGLARTTTGSNLNQIVVLDHAARTVVVFEGHVLD
Sbjct: 1   MSDSDSSPSPSPPPPPRTLSMLLPFLLGLARTTTGSNLNQIVVLDHAARTVVVFEGHVLD 60

Query: 61  SLLRDLSEKSGPLPASKASIDAMPRVGVTELGTDCAICLDGFEVAEEAREMPCKHMYHSD 120
           SLLRDLSEKSGPLPASKASIDAMPRVGVTELGTDCAICLDGFEVAEEAREMPCKHMYHSD
Sbjct: 61  SLLRDLSEKSGPLPASKASIDAMPRVGVTELGTDCAICLDGFEVAEEAREMPCKHMYHSD 120

Query: 121 CIEKWLNVRGTCPVCRFVMPVDDRRKDGGVGGGDVEEDEDMEGGESGEGRVVVVNLWVND 180
           CIEKWLNVRGTCPVCRFVMPVDDRRKDGGVGGGDVEEDEDMEGGESGEGRVVVVNLWVND
Sbjct: 121 CIEKWLNVRGTCPVCRFVMPVDDRRKDGGVGGGDVEEDEDMEGGESGEGRVVVVNLWVND 180

Query: 181 GEPMDVESGLEHGSEDSDSESQDEIMVEVDGSSTQEQDPSSEDSSSFSFSSFFN 235
           GEPMDVESGLEHGSEDSDSESQDEIMVEVDGSSTQEQDPSSEDSSSFSFSSFFN
Sbjct: 181 GEPMDVESGLEHGSEDSDSESQDEIMVEVDGSSTQEQDPSSEDSSSFSFSSFFN 234

[Close]

BLAST of MELO3C021991 vs. ExPASy TrEMBL
Match: A0A1S3CC03 (E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo OX=3656 GN=LOC103498739 PE=4 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 1.3e-118
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MSDSDSSPSPSPPPPPRTLSMLLPFLLGLARTTTGSNLNQIVVLDHAARTVVVFEGHVLD 60
           MSDSDSSPSPSPPPPPRTLSMLLPFLLGLARTTTGSNLNQIVVLDHAARTVVVFEGHVLD
Sbjct: 1   MSDSDSSPSPSPPPPPRTLSMLLPFLLGLARTTTGSNLNQIVVLDHAARTVVVFEGHVLD 60

Query: 61  SLLRDLSEKSGPLPASKASIDAMPRVGVTELGTDCAICLDGFEVAEEAREMPCKHMYHSD 120
           SLLRDLSEKSGPLPASKASIDAMPRVGVTELGTDCAICLDGFEVAEEAREMPCKHMYHSD
Sbjct: 61  SLLRDLSEKSGPLPASKASIDAMPRVGVTELGTDCAICLDGFEVAEEAREMPCKHMYHSD 120

Query: 121 CIEKWLNVRGTCPVCRFVMPVDDRRKDGGVGGGDVEEDEDMEGGESGEGRVVVVNLWVND 180
           CIEKWLNVRGTCPVCRFVMPVDDRRKDGGVGGGDVEEDEDMEGGESGEGRVVVVNLWVND
Sbjct: 121 CIEKWLNVRGTCPVCRFVMPVDDRRKDGGVGGGDVEEDEDMEGGESGEGRVVVVNLWVND 180

Query: 181 GEPMDVESGLEHGSEDSDSESQDEIMVEVDGSSTQEQDPS 221
           GEPMDVESGLEHGSEDSDSESQDEIMVEVDGSSTQEQDPS
Sbjct: 181 GEPMDVESGLEHGSEDSDSESQDEIMVEVDGSSTQEQDPS 220

[Close]

BLAST of MELO3C021991 vs. ExPASy TrEMBL
Match: A0A0A0KS87 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G636570 PE=4 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 2.0e-116
Identity = 227/240 (94.58%), Postives = 228/240 (95.00%), Query Frame = 0


Query: 1   MSDSDSSPSPSPPPPPRTLSMLLPFLLGLARTTTGSNLNQIVVLDHAARTVVVFEGHVLD 60
           MSDSDSSPSPSPPPPPRTLSMLLPFLLGLARTTTGSNLNQIVVLDHAARTVVVFEGHVLD
Sbjct: 1   MSDSDSSPSPSPPPPPRTLSMLLPFLLGLARTTTGSNLNQIVVLDHAARTVVVFEGHVLD 60

Query: 61  SLLRDLSEKSGPLPASKASIDAMPRVGVTELGTDCAICLDGFEVAEEAREMPCKHMYHSD 120
           SLLRDLSEKSGPLPASKASIDAMPRVGVTELG DCAICLDGFEV EEAREMPCKHMYHSD
Sbjct: 61  SLLRDLSEKSGPLPASKASIDAMPRVGVTELGMDCAICLDGFEVDEEAREMPCKHMYHSD 120

Query: 121 CIEKWLNVRGTCPVCRFVMPVDDRRKD-GGVGGGDVEEDEDM---EGGESGEGRVVVVNL 180
           CIEKWLNVRGTCPVCRF MPVDDRRKD GG GGGD EE+EDM   EGGE GEGRVVVVNL
Sbjct: 121 CIEKWLNVRGTCPVCRFAMPVDDRRKDGGGGGGGDEEEEEDMEGGEGGEGGEGRVVVVNL 180

Query: 181 WVNDGEPMDVESGLEHGSEDSDSESQDEIMVEVDGSST--QEQDPSSEDSSSFSFSSFFN 235
           WVNDGEPMDVESGLEHGSEDSDSESQDEIMVEVDGSST  QEQDPSSEDSSSFSFSSFFN
Sbjct: 181 WVNDGEPMDVESGLEHGSEDSDSESQDEIMVEVDGSSTQEQEQDPSSEDSSSFSFSSFFN 240

[Close]

BLAST of MELO3C021991 vs. ExPASy TrEMBL
Match: A0A6J1JYB9 (E3 ubiquitin-protein ligase RNF181-like OS=Cucurbita maxima OX=3661 GN=LOC111489408 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 6.1e-97
Identity = 197/238 (82.77%), Postives = 205/238 (86.13%), Query Frame = 0


Query: 1   MSDSDSSPSPSPP-PPPRTLSMLLPFLLGLARTTTGSNLNQIVVLDHAARTVVVFEGHVL 60
           MSDSDSS SP P  PPPR+LSMLLPFLLGLARTT GS+LNQIVVLDHAARTVVVFEGHVL
Sbjct: 1   MSDSDSSSSPPPSLPPPRSLSMLLPFLLGLARTTPGSHLNQIVVLDHAARTVVVFEGHVL 60

Query: 61  DSLLRDLSEKSGPLPASKASIDAMPRVGVTELGTDCAICLDGFEVAEEAREMPCKHMYHS 120
           +S LRDLSEKSGPLPASKASIDAMPRVG+TELG DCAICLDGFEV  EAREMPCKHMYHS
Sbjct: 61  ESFLRDLSEKSGPLPASKASIDAMPRVGITELGMDCAICLDGFEVGAEAREMPCKHMYHS 120

Query: 121 DCIEKWLNVRGTCPVCRFVMPVDDRRKDGGVGGGDVEEDEDMEGGESGEGRVVVVNLWVN 180
           DCIEKWL VRGTCP+CRF MPVDD+        G  ++DEDMEG    EGRVVVVNLWVN
Sbjct: 121 DCIEKWLRVRGTCPICRFTMPVDDQE-------GKKDDDEDMEG---DEGRVVVVNLWVN 180

Query: 181 DGEPMD---VESGLEHGSEDSDSESQDEIMVEVDGSSTQEQDPSSEDSSSFSFSSFFN 235
           DGEPMD   VESGL HGS DSDSES DEI VEVD SSTQEQDPSSEDSSSFSFSSFFN
Sbjct: 181 DGEPMDVESVESGLGHGSGDSDSESHDEITVEVDASSTQEQDPSSEDSSSFSFSSFFN 228

[Close]

BLAST of MELO3C021991 vs. ExPASy TrEMBL
Match: A0A6J1FLT0 (E3 ubiquitin-protein ligase RNF181-like OS=Cucurbita moschata OX=3662 GN=LOC111445129 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 4.4e-95
Identity = 194/238 (81.51%), Postives = 203/238 (85.29%), Query Frame = 0


Query: 1   MSDSDSSPSPSPP-PPPRTLSMLLPFLLGLARTTTGSNLNQIVVLDHAARTVVVFEGHVL 60
           MSDSDSS SP P  PPPR+LSMLLPFLLGLARTT GS+LNQIVVLDHAARTVVVFEG VL
Sbjct: 1   MSDSDSSSSPPPSLPPPRSLSMLLPFLLGLARTTPGSHLNQIVVLDHAARTVVVFEGRVL 60

Query: 61  DSLLRDLSEKSGPLPASKASIDAMPRVGVTELGTDCAICLDGFEVAEEAREMPCKHMYHS 120
           +S LRDLSEKSGPLPASKASIDAMPRVG+TELG DCAICLDGFEV  EAREMPCKH+YHS
Sbjct: 61  ESFLRDLSEKSGPLPASKASIDAMPRVGITELGMDCAICLDGFEVGAEAREMPCKHLYHS 120

Query: 121 DCIEKWLNVRGTCPVCRFVMPVDDRRKDGGVGGGDVEEDEDMEGGESGEGRVVVVNLWVN 180
           DCIEKWL VRGTCP+CRF MPVDD+        G  ++DEDMEG E    RVVVVNLWVN
Sbjct: 121 DCIEKWLRVRGTCPICRFTMPVDDQE-------GKKDDDEDMEGDED---RVVVVNLWVN 180

Query: 181 DGEPMD---VESGLEHGSEDSDSESQDEIMVEVDGSSTQEQDPSSEDSSSFSFSSFFN 235
           DGEPMD   VESGL HGS DSDSES DEI VEVD SSTQEQDPSSEDSSSFSFSSFFN
Sbjct: 181 DGEPMDVESVESGLGHGSGDSDSESHDEITVEVDASSTQEQDPSSEDSSSFSFSSFFN 228

[Close]

BLAST of MELO3C021991 vs. TAIR 10
Match: AT1G26800.1 (RING/U-box superfamily protein )

HSP 1 Score: 110.9 bits (276), Expect = 1.4e-24
Identity = 69/191 (36.13%), Postives = 99/191 (51.83%), Query Frame = 0


Query: 17  RTLSMLLPFLLGLARTTT--------GSNLNQIVVLDHAARTVVVFEGHV-LDSLLRDL- 76
           R L + LPFLLG +   +         S+  +I++++   + ++V EG   ++ LLR L 
Sbjct: 24  RDLYLFLPFLLGFSDQESSNGDDDDVASSRERIILVNPFTQGMIVLEGSSGMNPLLRSLL 83

Query: 77  -SEKSGPLPASKASIDAMPRVGVTELGTDCAICLDGFEVAEEAREMPCKHMYHSDCIEKW 136
            S + G  PASKASIDAMP V +     +C ICL+ ++  E  +EMPCKH +H  CIEKW
Sbjct: 84  ESREEGRPPASKASIDAMPIVEIDGCEGECVICLEEWKSEETVKEMPCKHRFHGGCIEKW 143

Query: 137 LNVRGTCPVCRFVMPVDDRRKDGGVGGGDVEEDEDMEGGESGEGRVVVVNLWVNDGEPMD 196
           L   G+CPVCR+ MPVD                 D  G +  +G  + V    NDG  + 
Sbjct: 144 LGFHGSCPVCRYEMPVDG----------------DEIGKKRNDGNEIWVRFSFNDGRRIR 198

[Close]

BLAST of MELO3C021991 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 98.2 bits (243), Expect = 9.2e-21
Identity = 48/114 (42.11%), Postives = 68/114 (59.65%), Query Frame = 0


Query: 54  FEGHVLDSLLRDLSE----KSGPLPASKASIDAMPRVGVTE-----LGTDCAICLDGFEV 113
           F G  L+ L++ L+E    + G  PASK++IDA+P V VT+         CA+C+D FE 
Sbjct: 166 FFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFED 225

Query: 114 AEEAREMPCKHMYHSDCIEKWLNVRGTCPVCRFVMPVDD----RRKDGGVGGGD 155
             + ++MPCKH++H DC+  WL +  +CPVCRF +P DD     R  G  G GD
Sbjct: 226 GSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENRSQGSQGSGD 279

[Close]

BLAST of MELO3C021991 vs. TAIR 10
Match: AT3G46620.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 97.1 bits (240), Expect = 2.1e-20
Identity = 44/103 (42.72%), Postives = 65/103 (63.11%), Query Frame = 0


Query: 53  VFEGHVLDSLLRDLSE---------KSGPLPASKASIDAMPRVGVTELGT----DCAICL 112
           +  G   + LL  LS+         +SG  PASK++I+++PRV +++  T    +CA+C 
Sbjct: 160 ILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAIESLPRVEISDCHTKAEANCAVCT 219

Query: 113 DGFEVAEEAREMPCKHMYHSDCIEKWLNVRGTCPVCRFVMPVD 143
           + FE   E REMPCKH++H DCI  WL++R +CPVCRF +P D
Sbjct: 220 EVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCRFELPSD 262

[Close]

BLAST of MELO3C021991 vs. TAIR 10
Match: AT4G26400.2 (RING/U-box superfamily protein )

HSP 1 Score: 95.9 bits (237), Expect = 4.6e-20
Identity = 44/97 (45.36%), Postives = 59/97 (60.82%), Query Frame = 0


Query: 54  FEGHVLDSLLRDLSE----KSGPLPASKASIDAMPRVGVTELGTDCAICLDGFEVAEEAR 113
           F G  LD LL  L++    + G LPA K  +D +P V ++E    C+ICLD F+   EA+
Sbjct: 197 FVGSSLDHLLEHLADNDSIRHGSLPARKEVVDNLPTVKISE-SLQCSICLDDFDKGSEAK 256

Query: 114 EMPCKHMYHSDCIEKWLNVRGTCPVCRFVMPVDDRRK 147
           EMPCKH +H  CI  WL +  +CPVCR+ +P DD  K
Sbjct: 257 EMPCKHKFHIRCIVPWLELHSSCPVCRYELPPDDETK 292

[Close]

BLAST of MELO3C021991 vs. TAIR 10
Match: AT4G26400.1 (RING/U-box superfamily protein )

HSP 1 Score: 95.9 bits (237), Expect = 4.6e-20
Identity = 44/97 (45.36%), Postives = 59/97 (60.82%), Query Frame = 0


Query: 54  FEGHVLDSLLRDLSE----KSGPLPASKASIDAMPRVGVTELGTDCAICLDGFEVAEEAR 113
           F G  LD LL  L++    + G LPA K  +D +P V ++E    C+ICLD F+   EA+
Sbjct: 197 FVGSSLDHLLEHLADNDSIRHGSLPARKEVVDNLPTVKISE-SLQCSICLDDFDKGSEAK 256

Query: 114 EMPCKHMYHSDCIEKWLNVRGTCPVCRFVMPVDDRRK 147
           EMPCKH +H  CI  WL +  +CPVCR+ +P DD  K
Sbjct: 257 EMPCKHKFHIRCIVPWLELHSSCPVCRYELPPDDETK 292

The following BLAST results are available for this feature:

BLAST of MELO3C021991 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0039492.1	6.4e-125	100.00	E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa] >TYK15247.1 E3...	[more]
XP_008459699.1	2.6e-118	100.00	PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo]	[more]
XP_011656279.1	4.2e-116	94.58	E3 ubiquitin-protein ligase MPSR1 [Cucumis sativus] >KGN52465.1 hypothetical pro...	[more]
XP_022993365.1	1.3e-96	82.77	E3 ubiquitin-protein ligase RNF181-like [Cucurbita maxima]	[more]
XP_023551536.1	2.8e-96	82.35	E3 ubiquitin-protein ligase RNF181-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C021991 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQX2	1.9e-23	36.13	E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 ...	[more]
Q8LPN7	1.3e-19	42.11	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
P0CH30	1.7e-19	40.15	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q9SNB6	2.9e-19	42.72	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ...	[more]
Q940T5	1.4e-18	37.33	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]

BLAST of MELO3C021991 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T7P7	3.1e-125	100.00	E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3CC03	1.3e-118	100.00	E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo OX=3656 GN=LOC103498739 P...	[more]
A0A0A0KS87	2.0e-116	94.58	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G636570 P...	[more]
A0A6J1JYB9	6.1e-97	82.77	E3 ubiquitin-protein ligase RNF181-like OS=Cucurbita maxima OX=3661 GN=LOC111489...	[more]
A0A6J1FLT0	4.4e-95	81.51	E3 ubiquitin-protein ligase RNF181-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of MELO3C021991 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26800.1	1.4e-24	36.13	RING/U-box superfamily protein	[more]
AT3G19950.1	9.2e-21	42.11	RING/U-box superfamily protein	[more]
AT3G46620.1	2.1e-20	42.72	zinc finger (C3HC4-type RING finger) family protein	[more]
AT4G26400.2	4.6e-20	45.36	RING/U-box superfamily protein	[more]
AT4G26400.1	4.6e-20	45.36	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 95..135 e-value: 1.2E-8 score: 44.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 94..136 e-value: 4.4E-14 score: 52.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 95..136 score: 12.607302
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 94..136 e-value: 0.0022 score: 12.8
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 63..141 e-value: 8.0E-21 score: 75.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..234
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..234
None	No IPR available	PANTHER	PTHR15710:SF132	E3 UBIQUITIN-PROTEIN LIGASE MPSR1	coord: 40..147
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 40..147
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 94..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C021991.1	MELO3C021991.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding