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MELO3C021989 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGAAAAATAAAATCCCCGGTTTTGTGTAGAGCGGCGGCGGAAGGGTTTAGCATTTCAGTGCCCTAAATCTAAGACGGAGCTCCCTTCCTTCATCCTCGCTCATTCCACATAATTTCTCTCGATTTACCCATGGCTTCCTTTGCCGCCAGGGCCATTTTCCGATCCTCCTCCGGCAAGACTGCCACTCTTCTGAGCGCCGGAGCCAGAGCTGCTCCGGCTCGTTCACCATTTCGCATTGCTTCCAAACGACCTTTCTCCCACTCCTCTTTTAGGTAATTTCCTCGCAACCCCTCGACTTCGACGTAATTTTTTCAATGTAATTTGATTCTGGAAACTGAGCGTGTAAGTTGAGTTGAGTTAAGATTAGTGGAAAAGTATGCCGAGTGTCTCATAGGTGTTGTTTTTCACTCTCTTTGAAGGATTCCGATTGAAATGAGCTTTTGCGTGGAGTCCATGCTTCCATTCCATTCTGCAACTTCTTCGGCATTAATGACTTCGATGCTTTCTGTTTCTCCCCATAGTTATGGTTGGCTTTCAGAAGGTACTTTCGGTCCTTATTCTTATAGAGTGAATTTTACTTTTTTCTATGTTCTTGTTATGCTGCCACTATGAATTCTGATTTCTTTTGTTCATCATATTGGGGTAGCTGCATTCTTGGTCCTACAACCGATTTAGTAGTTTCTACAGTGAATTTTAGTTTTTTTTTTTTTTTTTTTTATCAATGTTCTTGTTCTGCTGCCACCATAAAGTTTCTGCTTTCTTTTGTTCAAGAATTTGGATAGCTCCATTCTTAATCTTACTACCGCAATCTAGTTGTTTCTAGAGTGAGTTTTAACTTTTTCTATATTCTTGTTAGCTGCCACTATGAAAGTTTCTGATTTCTTTTGTTCAAGAAATTGAATAATTGTATTCTTGGCCCTATATTTTTGGCTCTACACGGATGGAGGATAGCGTGAGATATACACCATTGACTCTATTTTTGGCCCTTTGAATGCCGGATGAAAAGGAGGAGAATGAAATAGTGAAGTGAAGGCCTTGTAGATAATGTATTTCTCTTGACAAAAGGACTTTTCATTGATATTTGAAAATTTACAAGAAACCAAACTCTATTACAAACCTAACAAGGACGGTGTTTTAATTCATTCCATCACCGATTTAAATTGTTAGAAAACAGAAATGGATAACAATTCTCCAAAGAGTCTCCAACTAGTTCAGCACAAGTGCCCATGTCAAACCATTGCCAGTATTTTGGGATAAATATATTTACCTACTGCTTGTCTGCTTCTATCATCTAAATGCTCTTTTTGCTTGATTGAACAGGCATCTTATCCGCCTTTTTTTTTTTTTTGCTTTTTTCGTATCAATGAATTGCAAATTTGAGTTCATCTTCATAAGATAAAGATTAAATGCTGCATTCTGTACTAGGGTCTAAATTTTAAGCTAAAGAAGTAACAAATCCCTCCCTTCCAAATGTAACTTGTAATTTAGTTCTTTATAAGTGATGCTTATTCAAATCACGACTATTTCATCCACATAATTGATATAAACGTGAGGATACTAATTGTGATGTTTAATCAGTGTTCAATGATGATGTGTGATGACGAATGGTCAAGGGGCGGGAAGTTTTATGTGCAGAGTTCTACACTGTGACACTGCAACTGCTAAATTTTGTGAACTGATCTGCAGGAATTTGGTTTCCCAAGTCTTGGCTTTCATTCTAGTTTGCACGTCTTAGATTCTGAATTTGTGTCACTATGGACTACTAGTAAAGTGTATAGGAAGAGATCCCCAATCAATAAACATTTGAGTTTTATTTGAATAGAAAGGCTTCAAGAAACTGAATTCACAAAGTCTTATTATGTTGAATTCCTTATAGGATTGTCTTGCAATAAGAGGAAGGATTCTTTCTCCAGTTGTATGGTTACTCTGTCATTACTTAAGCTATGAACATACTTCACAGTTCTGATGGATGCTTGTGTTACGACTTCAAAATTTGTTAGATTGCTGAATGTATGAACTCGAAAAGATTTATT ATGGAGGAAAAATAAAATCCCCGGTTTTGTGTAGAGCGGCGGCGGAAGGGTTTAGCATTTCAGTGCCCTAAATCTAAGACGGAGCTCCCTTCCTTCATCCTCGCTCATTCCACATAATTTCTCTCGATTTACCCATGGCTTCCTTTGCCGCCAGGGCCATTTTCCGATCCTCCTCCGGCAAGACTGCCACTCTTCTGAGCGCCGGAGCCAGAGCTGCTCCGGCTCGTTCACCATTTCGCATTGCTTCCAAACGACCTTTCTCCCACTCCTCTTTTAGGATTCCGATTGAAATGAGCTTTTGCGTGGAGTCCATGCTTCCATTCCATTCTGCAACTTCTTCGGCATTAATGACTTCGATGCTTTCTGTTTCTCCCCATAGTTATGGTTGGCTTTCAGAAGTGTTCAATGATGATGTGTGATGACGAATGGTCAAGGGGCGGGAAGTTTTATGTGCAGAGTTCTACACTGTGACACTGCAACTGCTAAATTTTGTGAACTGATCTGCAGGAATTTGGTTTCCCAAGTCTTGGCTTTCATTCTAGTTTGCACGTCTTAGATTCTGAATTTGTGTCACTATGGACTACTAGTAAAGTGTATAGGAAGAGATCCCCAATCAATAAACATTTGAGTTTTATTTGAATAGAAAGGCTTCAAGAAACTGAATTCACAAAGTCTTATTATGTTGAATTCCTTATAGGATTGTCTTGCAATAAGAGGAAGGATTCTTTCTCCAGTTGTATGGTTACTCTGTCATTACTTAAGCTATGAACATACTTCACAGTTCTGATGGATGCTTGTGTTACGACTTCAAAATTTGTTAGATTGCTGAATGTATGAACTCGAAAAGATTTATT ATGGCTTCCTTTGCCGCCAGGGCCATTTTCCGATCCTCCTCCGGCAAGACTGCCACTCTTCTGAGCGCCGGAGCCAGAGCTGCTCCGGCTCGTTCACCATTTCGCATTGCTTCCAAACGACCTTTCTCCCACTCCTCTTTTAGGATTCCGATTGAAATGAGCTTTTGCGTGGAGTCCATGCTTCCATTCCATTCTGCAACTTCTTCGGCATTAATGACTTCGATGCTTTCTGTTTCTCCCCATAGTTATGGTTGGCTTTCAGAAGTGTTCAATGATGATGTGTGA MASFAARAIFRSSSGKTATLLSAGARAAPARSPFRIASKRPFSHSSFRIPIEMSFCVESMLPFHSATSSALMTSMLSVSPHSYGWLSEVFNDDV Homology
BLAST of MELO3C021989 vs. NCBI nr
Match: XP_008459322.1 (PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucumis melo]) HSP 1 Score: 177.2 bits (448), Expect = 6.7e-41 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of MELO3C021989 vs. NCBI nr
Match: XP_008459321.1 (PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucumis melo]) HSP 1 Score: 166.0 bits (419), Expect = 1.6e-37 Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0
BLAST of MELO3C021989 vs. NCBI nr
Match: XP_004148698.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X2 [Cucumis sativus] >KGN52462.1 hypothetical protein Csa_008896 [Cucumis sativus]) HSP 1 Score: 164.1 bits (414), Expect = 5.9e-37 Identity = 86/94 (91.49%), Postives = 90/94 (95.74%), Query Frame = 0
BLAST of MELO3C021989 vs. NCBI nr
Match: KAA0039497.1 (protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa]) HSP 1 Score: 162.5 bits (410), Expect = 1.7e-36 Identity = 87/88 (98.86%), Postives = 87/88 (98.86%), Query Frame = 0
BLAST of MELO3C021989 vs. NCBI nr
Match: TYK15251.1 (protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa]) HSP 1 Score: 162.5 bits (410), Expect = 1.7e-36 Identity = 87/88 (98.86%), Postives = 87/88 (98.86%), Query Frame = 0
BLAST of MELO3C021989 vs. ExPASy Swiss-Prot
Match: Q93ZJ3 (Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD6 PE=3 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 2.5e-14 Identity = 47/92 (51.09%), Postives = 65/92 (70.65%), Query Frame = 0
BLAST of MELO3C021989 vs. ExPASy TrEMBL
Match: A0A1S3C9E2 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498488 PE=4 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 3.3e-41 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of MELO3C021989 vs. ExPASy TrEMBL
Match: A0A1S3CB40 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498488 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 7.5e-38 Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0
BLAST of MELO3C021989 vs. ExPASy TrEMBL
Match: A0A0A0KVK4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636540 PE=4 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 2.9e-37 Identity = 86/94 (91.49%), Postives = 90/94 (95.74%), Query Frame = 0
BLAST of MELO3C021989 vs. ExPASy TrEMBL
Match: A0A5D3CTR8 (Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00250 PE=4 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 8.3e-37 Identity = 87/88 (98.86%), Postives = 87/88 (98.86%), Query Frame = 0
BLAST of MELO3C021989 vs. ExPASy TrEMBL
Match: A0A5A7TDD1 (Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G003170 PE=4 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 8.3e-37 Identity = 87/88 (98.86%), Postives = 87/88 (98.86%), Query Frame = 0
BLAST of MELO3C021989 vs. TAIR 10
Match: AT2G20585.1 (nuclear fusion defective 6 ) HSP 1 Score: 79.3 bits (194), Expect = 1.8e-15 Identity = 47/92 (51.09%), Postives = 65/92 (70.65%), Query Frame = 0
BLAST of MELO3C021989 vs. TAIR 10
Match: AT1G28395.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 75.9 bits (185), Expect = 2.0e-14 Identity = 46/95 (48.42%), Postives = 66/95 (69.47%), Query Frame = 0
BLAST of MELO3C021989 vs. TAIR 10
Match: AT2G20585.2 (nuclear fusion defective 6 ) HSP 1 Score: 73.9 bits (180), Expect = 7.5e-14 Identity = 44/91 (48.35%), Postives = 63/91 (69.23%), Query Frame = 0
BLAST of MELO3C021989 vs. TAIR 10
Match: AT2G33847.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28395.4); Has 74 Blast hits to 74 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 72.4 bits (176), Expect = 2.2e-13 Identity = 41/90 (45.56%), Postives = 57/90 (63.33%), Query Frame = 0
BLAST of MELO3C021989 vs. TAIR 10
Match: AT2G20585.3 (nuclear fusion defective 6 ) HSP 1 Score: 71.6 bits (174), Expect = 3.7e-13 Identity = 43/86 (50.00%), Postives = 61/86 (70.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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