MELO3C021940 (gene) Melon (DHL92) v4

Overview


Name	MELO3C021940
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	cold-regulated 413 plasma membrane protein 2-like
Location	chr11: 4658916 .. 4661749 (-)
RNA-Seq Expression	MELO3C021940
Synteny	MELO3C021940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCCATTTCTTTATTTATATATTTAACACACAAAATCCTATCTGTCTTTCAGTACTCTGCTTCGATACTTTCGCTTCTTCTTCTTCGAGATCGGAGATGGTGAAACCCAACCACTTGAAAATGGTGACGGATTCTGACGCTGCCGATCTGATTTCCTCTGATCTCCGAGAACTTGGTAACGCTGCTAGAAAGCTTGCTACACACGCTGTTAAGCTCGGTGCTTCGGGTTTTACTGCTTCTTTTCTCCAATGGATTGCTTCCTTTGCTGCTATGTATGTCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCTCTCTCGGTCTTTGCTGTTTGTTTGATTGCTGAATTATGGTGATGTTGTTTTTTTGTGGTTCGTCGCTGCTGATCGGTTATTTTAGTGGAATTTATTTGTTTTGAGAAAGCTAATTGGTGATTTTGATTCGAGGAATTGTGTGTTTTGCGATTGATTTCTACTTGACTTTAGTAATTTGTTTGTTGATTTATGTGATGAAGTGGTTGAGGAGTATAACTATGATTTAGTTAGGGAAATGATTCATGTTACATTAAGATATGTGCTTCTGAGTGTTCTTTTTCCCGTGCCTTATCGATTTATCTACTTTTAGGTTTTCATAGATCGTTTTAATTTTACTTCAATTCTTTGTAAATGCAGTTACTTGTTGATTTTGGATCGGACGAACTGGAAGACGAATATCCTTACTTCATTGTTGATTCCGTACATTTTCTTTAGTCTTCCCGGTTTGATTTTCGGTTTTCTCAGGTGATCATCTCCACTCCGAGCAATTGCATTCAAATGAAGCTTCTGCAATTGCGTTTTTTTTTTTTGGTTAAATTGCTTTCTCTTTGCAGGGGAGAGTTTGGAAAATGGGTTGCCGTTATTGCTGTTGTGCTCCGTCTCTTCTTCCCGCGACGATTTCCAGGTAGTTTAGCCTCGACTTGATTATAATGATTACACATTTATTGCATTCATTTTTGGTTGATAATAAGTGCAGATTGTGTACCTTATAAGTATGTTGATATAGATTTAGAGCCATTAGTAGTTCTGATCTTCATATAGAGATTTTTGGATGACTACCACAATGACTAGTTTTTTCTATTTGCATTTTTGCTCTCTTCCCTTTTAGATTAACTTTCTACCTTATGAACTGCCTGCTTTTCTTTTTTAATTTTTTCCTTCACTTTTTAAAAAGTATTTTTTGAAATCTTAACTAAATTTGAAAAGAAAATTTCTGTGGTTTTCTGAAAACTATGGGTTGCTTAATTTTATTACAAAAACTTTTGGTAGAATAATGTTTATTTTGTTCTGGAAAGATGTTTTTCCTTCCTATCACACATGTTCTTAATATTTAAACAATATGTAAACAGGAAAACTGTTTTTGAACAGGATTTTGAAAGACCCATCTCTTATATTTTCAAACTCTTTAAGCATTGATATAAAGAAACAATTAATAAACAAAAATCCATTATCAAACCTTTTTCGACAACTTTGAGGTTATGAAGTTTGACAGGTAGAACTTTAAAGTAATCAAAAGATCCAAAACTTTAGTTCAAATATGGTAAGTACCTTTAGGTATTTTATATATCTTCAAAACTTACCTTTGGGTATTTTATATATCTTCAAAACTTACTTTCACATTTGTATTCCCAGCACCAAGATAATTTGACTCACCAAAGCTAAAAGGAACAAATTACATGCCAAACATCATTCATAATTATACATACTTTAATCTTATAAGTAAAAGGGATAATACCTTTTTTGGACGTTTAGATTGTTTTATTTGGTCTCTTCAAATGTTACAATCTTATCTTTGAGATTCGAATTTTGTTTCAATTTGATCATTGTCCTAAATTTTTTAATCTTCCATCTTGAATGTTAATCTTCGTTAATTAATTTAAGAGAAATGTAATTAATTAATGTTCATTATTAATTAATTTAAAGGGGTAAATCTTAGGAAACCAAATTGAAACTAAACTCAAACTTAAAGAAATAATATATAGTATTACGAAATTAACCACAGAATAGTATTACGAAATTAGCCACAGAATAGTATTTTTCTTTACTTAAAAAGGTTCAAGTTAATAATAGTAATCTCACATCACATGAGTTACTATCTATTATCTTGTGGAAGTATAATTATTGCATTCCATGCTCTACAGATTGGCTTGAACTGCCTGGAGCTTTGATACTTCTCATTGTGGTGGCTCCAAGTTTATTTGCCTCCACCATACGAAACGACGCCATCGGAGAAGCAATCTGTCTGATCATATCATGCTATTTACTGCAAGAACACATCAGAGCCTCTGGTGGATTCAGAAACTCATTCACAAAAGCGAATGGCATCTCAAACACCATCGGCATCATCCTTCTCTTCGTTTTCCCTGTCTGGGCGTTGGTACTCCGTGTTCTTTGATTGGTTTTCTTTTTTTCAAAATGCAATTATGGATTATTGATACTTTGTATTGTTTGGGAATGTGGGCTGTGAGATTTGTGTCTTAACCTTTTTTTTTCTCTTTCAAATTGGTTGTTTGATTGTCTTAATATAGGGGCTGTATCAGTGTAAAGTTAGATGATGAGTCTCTCACAAACGATTTGTGTATCATTTCTTTTGTGGGACAAAAGTGAGATAATATATGTTATATTGATTGTGAAGATTAAAGGGTCAATGTGCTACAAACAGAGTTTATTGCAAAATAATAATGATAATTAAAATTAAATTTATGGGGTCACAAATTTTGGCCTGTTTCGTGGATTACACAAATAATGTAAATTAGAGCAATGGATTTTCGATTCTAGAGATGTTTAAATTTGAAATTTTAAA

mRNA sequence

AATCCATTTCTTTATTTATATATTTAACACACAAAATCCTATCTGTCTTTCAGTACTCTGCTTCGATACTTTCGCTTCTTCTTCTTCGAGATCGGAGATGGTGAAACCCAACCACTTGAAAATGGTGACGGATTCTGACGCTGCCGATCTGATTTCCTCTGATCTCCGAGAACTTGGTAACGCTGCTAGAAAGCTTGCTACACACGCTGTTAAGCTCGGTGCTTCGGGTTTTACTGCTTCTTTTCTCCAATGGATTGCTTCCTTTGCTGCTATTTACTTGTTGATTTTGGATCGGACGAACTGGAAGACGAATATCCTTACTTCATTGTTGATTCCGTACATTTTCTTTAGTCTTCCCGGGGAGAGTTTGGAAAATGGGTTGCCGTTATTGCTGTTGTGCTCCGTCTCTTCTTCCCGCGACGATTTCCAGATTGTGTACCTTATAAATTGGCTTGAACTGCCTGGAGCTTTGATACTTCTCATTGTGGTGGCTCCAAGTTTATTTGCCTCCACCATACGAAACGACGCCATCGGAGAAGCAATCTGTCTGATCATATCATGCTATTTACTGCAAGAACACATCAGAGCCTCTGGTGGATTCAGAAACTCATTCACAAAAGCGAATGGCATCTCAAACACCATCGGCATCATCCTTCTCTTCGTTTTCCCTGTCTGGGCGTTGGTACTCCGTGTTCTTTGATTGGTTTTCTTTTTTTCAAAATGCAATTATGGATTATTGATACTTTGTATTGTTTGGGAATGTGGGCTGTGAGATTTGTGTCTTAACCTTTTTTTTTCTCTTTCAAATTGGTTGTTTGATTGTCTTAATATAGGGGCTGTATCAGTGTAAAGTTAGATGATGAGTCTCTCACAAACGATTTGTGTATCATTTCTTTTGTGGGACAAAAGTGAGATAATATATGTTATATTGATTGTGAAGATTAAAGGGTCAATGTGCTACAAACAGAGTTTATTGCAAAATAATAATGATAATTAAAATTAAATTTATGGGGTCACAAATTTTGGCCTGTTTCGTGGATTACACAAATAATGTAAATTAGAGCAATGGATTTTCGATTCTAGAGATGTTTAAATTTGAAATTTTAAA

Coding sequence (CDS)

ATCCATTTCTTTATTTATATATTTAACACACAAAATCCTATCTGTCTTTCAGTACTCTGCTTCGATACTTTCGCTTCTTCTTCTTCGAGATCGGAGATGGTGAAACCCAACCACTTGAAAATGGTGACGGATTCTGACGCTGCCGATCTGATTTCCTCTGATCTCCGAGAACTTGGTAACGCTGCTAGAAAGCTTGCTACACACGCTGTTAAGCTCGGTGCTTCGGGTTTTACTGCTTCTTTTCTCCAATGGATTGCTTCCTTTGCTGCTATTTACTTGTTGATTTTGGATCGGACGAACTGGAAGACGAATATCCTTACTTCATTGTTGATTCCGTACATTTTCTTTAGTCTTCCCGGGGAGAGTTTGGAAAATGGGTTGCCGTTATTGCTGTTGTGCTCCGTCTCTTCTTCCCGCGACGATTTCCAGATTGTGTACCTTATAAATTGGCTTGAACTGCCTGGAGCTTTGATACTTCTCATTGTGGTGGCTCCAAGTTTATTTGCCTCCACCATACGAAACGACGCCATCGGAGAAGCAATCTGTCTGATCATATCATGCTATTTACTGCAAGAACACATCAGAGCCTCTGGTGGATTCAGAAACTCATTCACAAAAGCGAATGGCATCTCAAACACCATCGGCATCATCCTTCTCTTCGTTTTCCCTGTCTGGGCGTTGGTACTCCGTGTTCTTTGA

Protein sequence

IHFFIYIFNTQNPICLSVLCFDTFASSSSRSEMVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIYLLILDRTNWKTNILTSLLIPYIFFSLPGESLENGLPLLLLCSVSSSRDDFQIVYLINWLELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKANGISNTIGIILLFVFPVWALVLRVL

Homology

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BLAST of MELO3C021940 vs. NCBI nr
Match: XP_008459238.1 (PREDICTED: cold-regulated 413 plasma membrane protein 2-like [Cucumis melo])

HSP 1 Score: 311.6 bits (797), Expect = 5.7e-81
Identity = 175/205 (85.37%), Postives = 179/205 (87.32%), Query Frame = 0


Query: 33  MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 92
           MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60

Query: 93  LLILDRTNWKTNILTSLLIPYIFFSLPGESL-----ENGLPLLLLCSVSSSRDDFQIVYL 152
           LLILDRTNWKTNILTSLLIPYIFFSLPG        E G  + ++  V      F     
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEFGKWVAVIAVVLRL---FFPRRF 120

Query: 153 INWLELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKA 212
            +WLELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKA
Sbjct: 121 PDWLELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKA 180

Query: 213 NGISNTIGIILLFVFPVWALVLRVL 233
           NGISNTIGIILLFVFPVWALVLRVL
Sbjct: 181 NGISNTIGIILLFVFPVWALVLRVL 202

[Close]

BLAST of MELO3C021940 vs. NCBI nr
Match: KAA0045966.1 (cold-regulated 413 plasma membrane protein 2-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 311.2 bits (796), Expect = 7.4e-81
Identity = 174/205 (84.88%), Postives = 179/205 (87.32%), Query Frame = 0


Query: 33  MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 92
           MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60

Query: 93  LLILDRTNWKTNILTSLLIPYIFFSLPGESL-----ENGLPLLLLCSVSSSRDDFQIVYL 152
           LLILDRTNWKTNILTSLLIPYIFFSLPG        E G  + ++  V      F     
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEFGKWVAVIAVVLRL---FFPRRF 120

Query: 153 INWLELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKA 212
            +WLELPGALILLIVVAPSLFAST+RNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKA
Sbjct: 121 PDWLELPGALILLIVVAPSLFASTVRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKA 180

Query: 213 NGISNTIGIILLFVFPVWALVLRVL 233
           NGISNTIGIILLFVFPVWALVLRVL
Sbjct: 181 NGISNTIGIILLFVFPVWALVLRVL 202

[Close]

BLAST of MELO3C021940 vs. NCBI nr
Match: XP_004145347.1 (cold-regulated 413 plasma membrane protein 2 [Cucumis sativus] >KGN61758.1 hypothetical protein Csa_006288 [Cucumis sativus])

HSP 1 Score: 308.5 bits (789), Expect = 4.8e-80
Identity = 173/205 (84.39%), Postives = 177/205 (86.34%), Query Frame = 0


Query: 33  MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 92
           MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60

Query: 93  LLILDRTNWKTNILTSLLIPYIFFSLPGESL-----ENGLPLLLLCSVSSSRDDFQIVYL 152
           LLILDRTNWKTNILTSLLIPYIFFSLPG        E G  + ++  V      F     
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGEFGKWVAVIAVVLRL---FFPRRF 120

Query: 153 INWLELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKA 212
            +WLELPGALILLIVVAPSLFA TIRND IGEAICLIISCYLLQEHIRASGGFRNSFTKA
Sbjct: 121 PDWLELPGALILLIVVAPSLFAKTIRNDPIGEAICLIISCYLLQEHIRASGGFRNSFTKA 180

Query: 213 NGISNTIGIILLFVFPVWALVLRVL 233
           NGISNTIGIILLFVFPVWALVLRVL
Sbjct: 181 NGISNTIGIILLFVFPVWALVLRVL 202

[Close]

BLAST of MELO3C021940 vs. NCBI nr
Match: TYK13619.1 (cold-regulated 413 plasma membrane protein 2-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 303.9 bits (777), Expect = 1.2e-78
Identity = 174/211 (82.46%), Postives = 179/211 (84.83%), Query Frame = 0


Query: 33  MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAI- 92
           MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAA+ 
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAMY 60

Query: 93  -----YLLILDRTNWKTNILTSLLIPYIFFSLPGESL-----ENGLPLLLLCSVSSSRDD 152
                YLLILDRTNWKTNILTSLLIPYIFFSLPG        E G  + ++  V      
Sbjct: 61  XXXSRYLLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEFGKWVAVIAVVLRL--- 120

Query: 153 FQIVYLINWLELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFR 212
           F      +WLELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFR
Sbjct: 121 FFPRRFPDWLELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFR 180

Query: 213 NSFTKANGISNTIGIILLFVFPVWALVLRVL 233
           NSFTKANGISNTIGIILLFVFPVWALVLRVL
Sbjct: 181 NSFTKANGISNTIGIILLFVFPVWALVLRVL 208

[Close]

BLAST of MELO3C021940 vs. NCBI nr
Match: XP_038902783.1 (cold-regulated 413 plasma membrane protein 2-like [Benincasa hispida])

HSP 1 Score: 298.5 bits (763), Expect = 5.0e-77
Identity = 168/205 (81.95%), Postives = 175/205 (85.37%), Query Frame = 0


Query: 33  MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 92
           MVKPN+LKMVTDSDAADLISSDLRELGNAA+KLATHAVKL ASGF ASFLQWIASFAAIY
Sbjct: 1   MVKPNYLKMVTDSDAADLISSDLRELGNAAKKLATHAVKLCASGFAASFLQWIASFAAIY 60

Query: 93  LLILDRTNWKTNILTSLLIPYIFFSLPGESL-----ENGLPLLLLCSVSSSRDDFQIVYL 152
           LLILDRTNWKTNILTSLLIPYIFFSLPG        E G  + ++  V      F     
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFLRGEFGKWVAVIAVVLRL---FFPRRF 120

Query: 153 INWLELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKA 212
            +WLELPGALILLIVVAPSLFA TIR DAIGEAICLIISCYLLQEHIRASGGFRNSFTKA
Sbjct: 121 PDWLELPGALILLIVVAPSLFAHTIRGDAIGEAICLIISCYLLQEHIRASGGFRNSFTKA 180

Query: 213 NGISNTIGIILLFVFPVWALVLRVL 233
           NGISNTIGI+LLFVFPVWALVLRVL
Sbjct: 181 NGISNTIGIVLLFVFPVWALVLRVL 202

[Close]

BLAST of MELO3C021940 vs. ExPASy Swiss-Prot
Match: Q9XIM7 (Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana OX=3702 GN=COR413PM1 PE=2 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.0e-49
Identity = 112/181 (61.88%), Postives = 129/181 (71.27%), Query Frame = 0


Query: 50  LISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIYLLILDRTNWKTNILTSL 109
           +I SD  EL  AA+ LATHA  L   GF  S L+W+AS AAIYLL+LDRTNWKTN+LTSL
Sbjct: 16  MIGSDFNELTIAAKNLATHAFTLTGLGFGTSVLEWVASIAAIYLLVLDRTNWKTNMLTSL 75

Query: 110 LIPYIFFSLPG--ESLENGLPLLLLCSVSSSRDDFQIVYLINWLELPGALILLIVVAPSL 169
           LIPYIFFSLP     +  G     +  V+     F   +   +LELP AL+LL VVAP+L
Sbjct: 76  LIPYIFFSLPSLIFGIFRGEIGKWIAFVAVVVQLFFPKHAREYLELPVALVLLAVVAPNL 135

Query: 170 FASTIRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKANGISNTIGIILLFVFPVWAL 229
            A T R+  IG AICL I CYLLQEHIRASGGFRN+FTKANGISNT+GII L VFPVWAL
Sbjct: 136 IAGTFRDSWIGLAICLGIGCYLLQEHIRASGGFRNAFTKANGISNTVGIICLVVFPVWAL 195

[Close]

BLAST of MELO3C021940 vs. ExPASy Swiss-Prot
Match: Q9SVL6 (Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana OX=3702 GN=COR413PM2 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 4.5e-49
Identity = 113/203 (55.67%), Postives = 142/203 (69.95%), Query Frame = 0


Query: 33  MVKPNHLKMVTDS-DAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAI 92
           M + ++L M TD  D   L++SD+ EL  AA+KL +   KLG  GF  SFL+++ASFAAI
Sbjct: 1   MGRMDYLAMKTDDVDTVALVNSDMEELKVAAKKLFSDVSKLGGLGFGVSFLKFLASFAAI 60

Query: 93  YLLILDRTNWKTNILTSLLIPYIFFSLPGE--SLENGLPLLLLCSVSSSRDDFQIVYLIN 152
           YLLILDRTNWKT +LTSLLIPYIF SLP    +  +G     +  V+     F   +  +
Sbjct: 61  YLLILDRTNWKTKMLTSLLIPYIFLSLPSVIFNFLSGDVGKWIAFVAVVLRLFFPKHFPD 120

Query: 153 WLELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKANG 212
           WLE+PG+LILL+VV+P   A  IR   IG  I L I CYLLQEHIRASGGFRNSFT+  G
Sbjct: 121 WLEMPGSLILLLVVSPHFLAHHIRGTWIGTVISLFIGCYLLQEHIRASGGFRNSFTQPRG 180

Query: 213 ISNTIGIILLFVFPVWALVLRVL 233
           +SNT+GIILL V+PVWAL++RV+
Sbjct: 181 VSNTLGIILLLVYPVWALIVRVM 203

[Close]

BLAST of MELO3C021940 vs. ExPASy Swiss-Prot
Match: O23164 (Cold-regulated 413 plasma membrane protein 4 OS=Arabidopsis thaliana OX=3702 GN=At4g37220 PE=2 SV=2)

HSP 1 Score: 186.0 bits (471), Expect = 4.7e-46
Identity = 104/204 (50.98%), Postives = 134/204 (65.69%), Query Frame = 0


Query: 33  MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 92
           M +   L M T+ +AA+LI+SD+ E   AA+KL      LG  GF  S LQW AS  AIY
Sbjct: 1   MGRGEFLAMKTEENAANLINSDMNEFVAAAKKLVKDVGMLGGVGFGTSVLQWAASIFAIY 60

Query: 93  LLILDRTNWKTNILTSLLIPYIFFSLPGE-----SLENGLPLLLLCSVSSSRDDFQIVYL 152
           LLILDRTNWKT +LT+LL+PYIFF+LP       S + G  + L+  +      F     
Sbjct: 61  LLILDRTNWKTKMLTTLLVPYIFFTLPSVIFQFFSGDFGKWIALIAIIVRL---FFPKEF 120

Query: 153 INWLELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKA 212
             WLE+P ALIL++VV+PSL A T+R   +G  ICL+I+CYL  EHI+ASGGF+NSFT+ 
Sbjct: 121 PEWLEIPVALILIVVVSPSLIAWTLRESWVGAVICLVIACYLFHEHIKASGGFKNSFTQK 180

Query: 213 NGISNTIGIILLFVFPVWALVLRV 232
           NGISNTIGI+ L V+PVW +   +
Sbjct: 181 NGISNTIGIVALLVYPVWTIFFHI 201

[Close]

BLAST of MELO3C021940 vs. ExPASy Swiss-Prot
Match: O64834 (Cold-regulated 413 plasma membrane protein 3 OS=Arabidopsis thaliana OX=3702 GN=At2g23680 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 6.8e-21
Identity = 63/151 (41.72%), Postives = 93/151 (61.59%), Query Frame = 0


Query: 81  FLQWIASFAAIYLLILDRTNWK--TNILTSLLIPYIFFSLP---GESLENGLPLLLLCSV 140
           FL+W+AS  A++L+ILD+T WK   NI+ SLL PY+F SLP    + L NG+   +    
Sbjct: 30  FLRWLASIVAVFLMILDQTKWKYSNNIMASLLAPYLFSSLPIVIFQVLRNGVGKWIALLT 89

Query: 141 SSSRDDFQIVYLINWLELPGALILLIVVAPSLFASTIRNDA--IGEAICLIISCYLLQEH 200
              R  F   +    LE+PGA ILLIVV PS   +  R+D    G  +CL+ S YL+ +H
Sbjct: 90  VILR-LFLPNHFHESLEIPGATILLIVVTPSDIGAIFRDDLRYTGGDVCLLTSFYLINKH 149

Query: 201 IRASGGFRNSFTKANGISNTIGIILLFVFPV 225
            +A GG +NSFT+ + ++ +I + +LFV+P+
Sbjct: 150 TKACGGIKNSFTQKDKVTYSICLWILFVYPI 179

[Close]

BLAST of MELO3C021940 vs. ExPASy TrEMBL
Match: A0A1S3CAX8 (cold-regulated 413 plasma membrane protein 2-like OS=Cucumis melo OX=3656 GN=LOC103498423 PE=3 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.7e-81
Identity = 175/205 (85.37%), Postives = 179/205 (87.32%), Query Frame = 0


Query: 33  MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 92
           MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60

Query: 93  LLILDRTNWKTNILTSLLIPYIFFSLPGESL-----ENGLPLLLLCSVSSSRDDFQIVYL 152
           LLILDRTNWKTNILTSLLIPYIFFSLPG        E G  + ++  V      F     
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEFGKWVAVIAVVLRL---FFPRRF 120

Query: 153 INWLELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKA 212
            +WLELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKA
Sbjct: 121 PDWLELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKA 180

Query: 213 NGISNTIGIILLFVFPVWALVLRVL 233
           NGISNTIGIILLFVFPVWALVLRVL
Sbjct: 181 NGISNTIGIILLFVFPVWALVLRVL 202

[Close]

BLAST of MELO3C021940 vs. ExPASy TrEMBL
Match: A0A5A7TUZ7 (Cold-regulated 413 plasma membrane protein 2-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G005140 PE=3 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 3.6e-81
Identity = 174/205 (84.88%), Postives = 179/205 (87.32%), Query Frame = 0


Query: 33  MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 92
           MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60

Query: 93  LLILDRTNWKTNILTSLLIPYIFFSLPGESL-----ENGLPLLLLCSVSSSRDDFQIVYL 152
           LLILDRTNWKTNILTSLLIPYIFFSLPG        E G  + ++  V      F     
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEFGKWVAVIAVVLRL---FFPRRF 120

Query: 153 INWLELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKA 212
            +WLELPGALILLIVVAPSLFAST+RNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKA
Sbjct: 121 PDWLELPGALILLIVVAPSLFASTVRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKA 180

Query: 213 NGISNTIGIILLFVFPVWALVLRVL 233
           NGISNTIGIILLFVFPVWALVLRVL
Sbjct: 181 NGISNTIGIILLFVFPVWALVLRVL 202

[Close]

BLAST of MELO3C021940 vs. ExPASy TrEMBL
Match: A0A0A0LIW2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G238250 PE=3 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 2.3e-80
Identity = 173/205 (84.39%), Postives = 177/205 (86.34%), Query Frame = 0


Query: 33  MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 92
           MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60

Query: 93  LLILDRTNWKTNILTSLLIPYIFFSLPGESL-----ENGLPLLLLCSVSSSRDDFQIVYL 152
           LLILDRTNWKTNILTSLLIPYIFFSLPG        E G  + ++  V      F     
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGEFGKWVAVIAVVLRL---FFPRRF 120

Query: 153 INWLELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKA 212
            +WLELPGALILLIVVAPSLFA TIRND IGEAICLIISCYLLQEHIRASGGFRNSFTKA
Sbjct: 121 PDWLELPGALILLIVVAPSLFAKTIRNDPIGEAICLIISCYLLQEHIRASGGFRNSFTKA 180

Query: 213 NGISNTIGIILLFVFPVWALVLRVL 233
           NGISNTIGIILLFVFPVWALVLRVL
Sbjct: 181 NGISNTIGIILLFVFPVWALVLRVL 202

[Close]

BLAST of MELO3C021940 vs. ExPASy TrEMBL
Match: A0A5D3CTU9 (Cold-regulated 413 plasma membrane protein 2-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G001230 PE=3 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 5.7e-79
Identity = 174/211 (82.46%), Postives = 179/211 (84.83%), Query Frame = 0


Query: 33  MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAI- 92
           MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAA+ 
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAMY 60

Query: 93  -----YLLILDRTNWKTNILTSLLIPYIFFSLPGESL-----ENGLPLLLLCSVSSSRDD 152
                YLLILDRTNWKTNILTSLLIPYIFFSLPG        E G  + ++  V      
Sbjct: 61  XXXSRYLLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEFGKWVAVIAVVLRL--- 120

Query: 153 FQIVYLINWLELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFR 212
           F      +WLELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFR
Sbjct: 121 FFPRRFPDWLELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFR 180

Query: 213 NSFTKANGISNTIGIILLFVFPVWALVLRVL 233
           NSFTKANGISNTIGIILLFVFPVWALVLRVL
Sbjct: 181 NSFTKANGISNTIGIILLFVFPVWALVLRVL 208

[Close]

BLAST of MELO3C021940 vs. ExPASy TrEMBL
Match: A0A6J1FVU6 (cold-regulated 413 plasma membrane protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111448574 PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 2.7e-76
Identity = 164/205 (80.00%), Postives = 176/205 (85.85%), Query Frame = 0


Query: 33  MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 92
           MVKP++LKMVTDSDAADLIS+DLRELGNAA+KLATHAV+LGASGF A+FLQW+ASFAAIY
Sbjct: 1   MVKPSYLKMVTDSDAADLISNDLRELGNAAKKLATHAVQLGASGFPAAFLQWLASFAAIY 60

Query: 93  LLILDRTNWKTNILTSLLIPYIFFSLPGESL-----ENGLPLLLLCSVSSSRDDFQIVYL 152
           LLILDRTNWKTNILTSLLIPYIFFSLPG        E G  +  +  V      F     
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFFFLRGEFGKWVAAIAVVLRL---FFPRRF 120

Query: 153 INWLELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKA 212
            +WLELPGALILLIVVAP LFAST+RNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKA
Sbjct: 121 PDWLELPGALILLIVVAPGLFASTMRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKA 180

Query: 213 NGISNTIGIILLFVFPVWALVLRVL 233
           NGISNTIGIILLFVFPVWALV+RVL
Sbjct: 181 NGISNTIGIILLFVFPVWALVVRVL 202

[Close]

BLAST of MELO3C021940 vs. TAIR 10
Match: AT2G15970.1 (cold regulated 413 plasma membrane 1 )

HSP 1 Score: 197.2 bits (500), Expect = 1.4e-50
Identity = 112/181 (61.88%), Postives = 129/181 (71.27%), Query Frame = 0


Query: 50  LISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIYLLILDRTNWKTNILTSL 109
           +I SD  EL  AA+ LATHA  L   GF  S L+W+AS AAIYLL+LDRTNWKTN+LTSL
Sbjct: 16  MIGSDFNELTIAAKNLATHAFTLTGLGFGTSVLEWVASIAAIYLLVLDRTNWKTNMLTSL 75

Query: 110 LIPYIFFSLPG--ESLENGLPLLLLCSVSSSRDDFQIVYLINWLELPGALILLIVVAPSL 169
           LIPYIFFSLP     +  G     +  V+     F   +   +LELP AL+LL VVAP+L
Sbjct: 76  LIPYIFFSLPSLIFGIFRGEIGKWIAFVAVVVQLFFPKHAREYLELPVALVLLAVVAPNL 135

Query: 170 FASTIRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKANGISNTIGIILLFVFPVWAL 229
            A T R+  IG AICL I CYLLQEHIRASGGFRN+FTKANGISNT+GII L VFPVWAL
Sbjct: 136 IAGTFRDSWIGLAICLGIGCYLLQEHIRASGGFRNAFTKANGISNTVGIICLVVFPVWAL 195

[Close]

BLAST of MELO3C021940 vs. TAIR 10
Match: AT3G50830.1 (cold-regulated 413-plasma membrane 2 )

HSP 1 Score: 196.1 bits (497), Expect = 3.2e-50
Identity = 113/203 (55.67%), Postives = 142/203 (69.95%), Query Frame = 0


Query: 33  MVKPNHLKMVTDS-DAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAI 92
           M + ++L M TD  D   L++SD+ EL  AA+KL +   KLG  GF  SFL+++ASFAAI
Sbjct: 1   MGRMDYLAMKTDDVDTVALVNSDMEELKVAAKKLFSDVSKLGGLGFGVSFLKFLASFAAI 60

Query: 93  YLLILDRTNWKTNILTSLLIPYIFFSLPGE--SLENGLPLLLLCSVSSSRDDFQIVYLIN 152
           YLLILDRTNWKT +LTSLLIPYIF SLP    +  +G     +  V+     F   +  +
Sbjct: 61  YLLILDRTNWKTKMLTSLLIPYIFLSLPSVIFNFLSGDVGKWIAFVAVVLRLFFPKHFPD 120

Query: 153 WLELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKANG 212
           WLE+PG+LILL+VV+P   A  IR   IG  I L I CYLLQEHIRASGGFRNSFT+  G
Sbjct: 121 WLEMPGSLILLLVVSPHFLAHHIRGTWIGTVISLFIGCYLLQEHIRASGGFRNSFTQPRG 180

Query: 213 ISNTIGIILLFVFPVWALVLRVL 233
           +SNT+GIILL V+PVWAL++RV+
Sbjct: 181 VSNTLGIILLLVYPVWALIVRVM 203

[Close]

BLAST of MELO3C021940 vs. TAIR 10
Match: AT4G37220.1 (Cold acclimation protein WCOR413 family )

HSP 1 Score: 186.0 bits (471), Expect = 3.3e-47
Identity = 104/204 (50.98%), Postives = 134/204 (65.69%), Query Frame = 0


Query: 33  MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 92
           M +   L M T+ +AA+LI+SD+ E   AA+KL      LG  GF  S LQW AS  AIY
Sbjct: 1   MGRGEFLAMKTEENAANLINSDMNEFVAAAKKLVKDVGMLGGVGFGTSVLQWAASIFAIY 60

Query: 93  LLILDRTNWKTNILTSLLIPYIFFSLPGE-----SLENGLPLLLLCSVSSSRDDFQIVYL 152
           LLILDRTNWKT +LT+LL+PYIFF+LP       S + G  + L+  +      F     
Sbjct: 61  LLILDRTNWKTKMLTTLLVPYIFFTLPSVIFQFFSGDFGKWIALIAIIVRL---FFPKEF 120

Query: 153 INWLELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKA 212
             WLE+P ALIL++VV+PSL A T+R   +G  ICL+I+CYL  EHI+ASGGF+NSFT+ 
Sbjct: 121 PEWLEIPVALILIVVVSPSLIAWTLRESWVGAVICLVIACYLFHEHIKASGGFKNSFTQK 180

Query: 213 NGISNTIGIILLFVFPVWALVLRV 232
           NGISNTIGI+ L V+PVW +   +
Sbjct: 181 NGISNTIGIVALLVYPVWTIFFHI 201

[Close]

BLAST of MELO3C021940 vs. TAIR 10
Match: AT2G15970.2 (cold regulated 413 plasma membrane 1 )

HSP 1 Score: 120.9 bits (302), Expect = 1.3e-27
Identity = 74/136 (54.41%), Postives = 88/136 (64.71%), Query Frame = 0


Query: 50  LISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIYLLILDRTNWKTNILTSL 109
           +I SD  EL  AA+ LATHA  L   GF  S L+W+AS AAIYLL+LDRTNWKTN+LTSL
Sbjct: 16  MIGSDFNELTIAAKNLATHAFTLTGLGFGTSVLEWVASIAAIYLLVLDRTNWKTNMLTSL 75

Query: 110 LIPYIFFSLPG--ESLENGLPLLLLCSVSSSRDDFQIVYLINWLELPGALILLIVVAPSL 169
           LIPYIFFSLP     +  G     +  V+     F   +   +LELP AL+LL VVAP+L
Sbjct: 76  LIPYIFFSLPSLIFGIFRGEIGKWIAFVAVVVQLFFPKHAREYLELPVALVLLAVVAPNL 135

Query: 170 FASTIRNDAIGEAICL 184
            A T R+  IG AICL
Sbjct: 136 IAGTFRDSWIGLAICL 151

[Close]

BLAST of MELO3C021940 vs. TAIR 10
Match: AT2G23680.1 (Cold acclimation protein WCOR413 family )

HSP 1 Score: 102.4 bits (254), Expect = 4.9e-22
Identity = 63/151 (41.72%), Postives = 93/151 (61.59%), Query Frame = 0


Query: 81  FLQWIASFAAIYLLILDRTNWK--TNILTSLLIPYIFFSLP---GESLENGLPLLLLCSV 140
           FL+W+AS  A++L+ILD+T WK   NI+ SLL PY+F SLP    + L NG+   +    
Sbjct: 30  FLRWLASIVAVFLMILDQTKWKYSNNIMASLLAPYLFSSLPIVIFQVLRNGVGKWIALLT 89

Query: 141 SSSRDDFQIVYLINWLELPGALILLIVVAPSLFASTIRNDA--IGEAICLIISCYLLQEH 200
              R  F   +    LE+PGA ILLIVV PS   +  R+D    G  +CL+ S YL+ +H
Sbjct: 90  VILR-LFLPNHFHESLEIPGATILLIVVTPSDIGAIFRDDLRYTGGDVCLLTSFYLINKH 149

Query: 201 IRASGGFRNSFTKANGISNTIGIILLFVFPV 225
            +A GG +NSFT+ + ++ +I + +LFV+P+
Sbjct: 150 TKACGGIKNSFTQKDKVTYSICLWILFVYPI 179

The following BLAST results are available for this feature:

BLAST of MELO3C021940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459238.1	5.7e-81	85.37	PREDICTED: cold-regulated 413 plasma membrane protein 2-like [Cucumis melo]	[more]
KAA0045966.1	7.4e-81	84.88	cold-regulated 413 plasma membrane protein 2-like protein [Cucumis melo var. mak...	[more]
XP_004145347.1	4.8e-80	84.39	cold-regulated 413 plasma membrane protein 2 [Cucumis sativus] >KGN61758.1 hypot...	[more]
TYK13619.1	1.2e-78	82.46	cold-regulated 413 plasma membrane protein 2-like protein [Cucumis melo var. mak...	[more]
XP_038902783.1	5.0e-77	81.95	cold-regulated 413 plasma membrane protein 2-like [Benincasa hispida]	[more]

BLAST of MELO3C021940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XIM7	2.0e-49	61.88	Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9SVL6	4.5e-49	55.67	Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
O23164	4.7e-46	50.98	Cold-regulated 413 plasma membrane protein 4 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
O64834	6.8e-21	41.72	Cold-regulated 413 plasma membrane protein 3 OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of MELO3C021940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CAX8	2.7e-81	85.37	cold-regulated 413 plasma membrane protein 2-like OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A5A7TUZ7	3.6e-81	84.88	Cold-regulated 413 plasma membrane protein 2-like protein OS=Cucumis melo var. m...	[more]
A0A0A0LIW2	2.3e-80	84.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G238250 PE=3 SV=1	[more]
A0A5D3CTU9	5.7e-79	82.46	Cold-regulated 413 plasma membrane protein 2-like protein OS=Cucumis melo var. m...	[more]
A0A6J1FVU6	2.7e-76	80.00	cold-regulated 413 plasma membrane protein 2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of MELO3C021940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15970.1	1.4e-50	61.88	cold regulated 413 plasma membrane 1	[more]
AT3G50830.1	3.2e-50	55.67	cold-regulated 413-plasma membrane 2	[more]
AT4G37220.1	3.3e-47	50.98	Cold acclimation protein WCOR413 family	[more]
AT2G15970.2	1.3e-27	54.41	cold regulated 413 plasma membrane 1	[more]
AT2G23680.1	4.9e-22	41.72	Cold acclimation protein WCOR413 family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008892	Cold-regulated 413 protein	PFAM	PF05562	WCOR413	coord: 41..219 e-value: 2.6E-63 score: 213.3
IPR008892	Cold-regulated 413 protein	PANTHER	PTHR33596	COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2	coord: 33..231
None	No IPR available	PANTHER	PTHR33596:SF18	COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 1-RELATED	coord: 33..231

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C021940.1	MELO3C021940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane