MELO3C021911.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C021911.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Histone-lysine N-methyltransferase ASHR1 isoform X3
Location	chr11: 5892064 .. 5892330 (-)
RNA-Seq Expression	MELO3C021911.jh1
Synteny	MELO3C021911.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAACGACAACGAAGGAGAGATCAATGATGAGTGAACGACTTTCGAAATCAATGATGCGCGAGTCATCGACGACAAATATGAAGGAGAATGAACTATCTTCCAGTCGTGAAATCGGTTATGAAAAAGCCAAAAAGAAAGCTAATACAGAAGATAACAATGGCGACCGAAACAAATTCAAGAAAGTCAAAATGTCGGTCTTCAATAGCGAGGATCCTAACTCGTGGTTGTTCCGTACTCAACACAAGCTGTGTTTACTCCCTTAA

mRNA sequence

ATGGAAACGACAACGAAGGAGAGATCAATGATGAGTGAACGACTTTCGAAATCAATGATGCGCGAGTCATCGACGACAAATATGAAGGAGAATGAACTATCTTCCAGTCGTGAAATCGGTTATGAAAAAGCCAAAAAGAAAGCTAATACAGAAGATAACAATGGCGACCGAAACAAATTCAAGAAAGTCAAAATGTCGGTCTTCAATAGCGAGGATCCTAACTCGTGGTTGTTCCGTACTCAACACAAGCTGTGTTTACTCCCTTAA

Coding sequence (CDS)

ATGGAAACGACAACGAAGGAGAGATCAATGATGAGTGAACGACTTTCGAAATCAATGATGCGCGAGTCATCGACGACAAATATGAAGGAGAATGAACTATCTTCCAGTCGTGAAATCGGTTATGAAAAAGCCAAAAAGAAAGCTAATACAGAAGATAACAATGGCGACCGAAACAAATTCAAGAAAGTCAAAATGTCGGTCTTCAATAGCGAGGATCCTAACTCGTGGTTGTTCCGTACTCAACACAAGCTGTGTTTACTCCCTTAA

Protein sequence

METTTKERSMMSERLSKSMMRESSTTNMKENELSSSREIGYEKAKKKANTEDNNGDRNKFKKVKMSVFNSEDPNSWLFRTQHKLCLLP

Homology

[Close]

BLAST of MELO3C021911.jh1 vs. NCBI nr
Match: KAA0032052.1 (histone-lysine N-methyltransferase ASHR1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 144 bits (362), Expect = 8.73e-43
Identity = 77/79 (97.47%), Postives = 77/79 (97.47%), Query Frame = 0


Query: 10 MMSERLSKSMMRESSTTNMKENELSSSREIGYEKAKKKANTEDNNGDRNKFKKVKMSVFN 69
          MMSERLSKSMMRESSTTNMKENE SSSREIGYEKAKKKANTEDNNGD NKFKKVKMSVFN
Sbjct: 1  MMSERLSKSMMRESSTTNMKENEPSSSREIGYEKAKKKANTEDNNGDENKFKKVKMSVFN 60

Query: 70 SEDPNSWLFRTQHKLCLLP 88
          SEDPNSWLFRTQHKLCLLP
Sbjct: 61 SEDPNSWLFRTQHKLCLLP 79

[Close]

BLAST of MELO3C021911.jh1 vs. NCBI nr
Match: KAA0065531.1 (histone-lysine N-methyltransferase ASHR1 isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 107 bits (268), Expect = 2.32e-25
Identity = 62/81 (76.54%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 1   METTTKERSMMSERLSKSMMRESSTTNMKENELSSSREIGYEKAKKKANTEDNNGDRNKF 60
           METT KERSMM  RLS+SMMRE STTNMKEN+ SSS EIG EK KKKA+ EDNNGDRNKF
Sbjct: 59  METTAKERSMMCARLSESMMRELSTTNMKENKPSSSCEIGSEKVKKKADIEDNNGDRNKF 118

Query: 61  KKVKMSVFNSEDPNSWLFRTQ 81
           KKV+M  FN EDPN WLFR +
Sbjct: 119 KKVEMPFFNGEDPNLWLFRAE 139

[Close]

BLAST of MELO3C021911.jh1 vs. NCBI nr
Match: TYK29287.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 107 bits (268), Expect = 4.09e-25
Identity = 62/81 (76.54%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 1   METTTKERSMMSERLSKSMMRESSTTNMKENELSSSREIGYEKAKKKANTEDNNGDRNKF 60
           METT KERSMM  RLS+SMMRE STTNMKEN+ SSS EIG EK KKKA+ EDNNGDRNKF
Sbjct: 59  METTAKERSMMCARLSESMMRELSTTNMKENKPSSSCEIGSEKVKKKADIEDNNGDRNKF 118

Query: 61  KKVKMSVFNSEDPNSWLFRTQ 81
           KKV+M  FN EDPN WLFR +
Sbjct: 119 KKVEMPFFNGEDPNLWLFRVE 139

[Close]

BLAST of MELO3C021911.jh1 vs. NCBI nr
Match: TYK19603.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 98.6 bits (244), Expect = 2.50e-23
Identity = 59/89 (66.29%), Postives = 68/89 (76.40%), Query Frame = 0


Query: 1   METTTKERSMMSERLSKSMMRESSTTNMKENELSSSREIGYEKAKKKANTEDNNGDRNKF 60
           MET   ERSMMSER S+SM RES  T+ KEN+ S++RE G EKA KK+NTEDNNGDRNKF
Sbjct: 59  METVANERSMMSERSSESMARESQATSPKENKPSTNRETGSEKADKKSNTEDNNGDRNKF 118

Query: 61  KKVKMSVFNSEDPNSWLFRTQ-----HKL 84
           KKV+M VFN EDP+ WLF T+     HKL
Sbjct: 119 KKVEMLVFNDEDPDLWLFHTKRYFQIHKL 147

[Close]

BLAST of MELO3C021911.jh1 vs. NCBI nr
Match: TYK16425.1 (histone-lysine N-methyltransferase ASHR1 isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 97.4 bits (241), Expect = 3.30e-22
Identity = 57/81 (70.37%), Postives = 66/81 (81.48%), Query Frame = 0


Query: 1   METTTKERSMMSERLSKSMMRESSTTNMKENELSSSREIGYEKAKKKANTEDNNGDRNKF 60
           METT KERSMMSERLS+SM RES  T+ KEN+   SR+I  EKA KK +TEDNNGD+NKF
Sbjct: 59  METTEKERSMMSERLSESMSRESLATSTKENKPFISRKIDSEKADKKFDTEDNNGDQNKF 118

Query: 61  KKVKMSVFNSEDPNSWLFRTQ 81
           KKV+M VFN EDP+SWLFR +
Sbjct: 119 KKVEMPVFNGEDPDSWLFRAE 139

[Close]

BLAST of MELO3C021911.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SLZ3 (Histone-lysine N-methyltransferase ASHR1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold223G00100 PE=4 SV=1)

HSP 1 Score: 144 bits (362), Expect = 4.23e-43
Identity = 77/79 (97.47%), Postives = 77/79 (97.47%), Query Frame = 0


Query: 10 MMSERLSKSMMRESSTTNMKENELSSSREIGYEKAKKKANTEDNNGDRNKFKKVKMSVFN 69
          MMSERLSKSMMRESSTTNMKENE SSSREIGYEKAKKKANTEDNNGD NKFKKVKMSVFN
Sbjct: 1  MMSERLSKSMMRESSTTNMKENEPSSSREIGYEKAKKKANTEDNNGDENKFKKVKMSVFN 60

Query: 70 SEDPNSWLFRTQHKLCLLP 88
          SEDPNSWLFRTQHKLCLLP
Sbjct: 61 SEDPNSWLFRTQHKLCLLP 79

[Close]

BLAST of MELO3C021911.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VII2 (Histone-lysine N-methyltransferase ASHR1 isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold638G00340 PE=4 SV=1)

HSP 1 Score: 107 bits (268), Expect = 1.12e-25
Identity = 62/81 (76.54%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 1   METTTKERSMMSERLSKSMMRESSTTNMKENELSSSREIGYEKAKKKANTEDNNGDRNKF 60
           METT KERSMM  RLS+SMMRE STTNMKEN+ SSS EIG EK KKKA+ EDNNGDRNKF
Sbjct: 59  METTAKERSMMCARLSESMMRELSTTNMKENKPSSSCEIGSEKVKKKADIEDNNGDRNKF 118

Query: 61  KKVKMSVFNSEDPNSWLFRTQ 81
           KKV+M  FN EDPN WLFR +
Sbjct: 119 KKVEMPFFNGEDPNLWLFRAE 139

[Close]

BLAST of MELO3C021911.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DZI1 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1212G00550 PE=4 SV=1)

HSP 1 Score: 107 bits (268), Expect = 1.98e-25
Identity = 62/81 (76.54%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 1   METTTKERSMMSERLSKSMMRESSTTNMKENELSSSREIGYEKAKKKANTEDNNGDRNKF 60
           METT KERSMM  RLS+SMMRE STTNMKEN+ SSS EIG EK KKKA+ EDNNGDRNKF
Sbjct: 59  METTAKERSMMCARLSESMMRELSTTNMKENKPSSSCEIGSEKVKKKADIEDNNGDRNKF 118

Query: 61  KKVKMSVFNSEDPNSWLFRTQ 81
           KKV+M  FN EDPN WLFR +
Sbjct: 119 KKVEMPFFNGEDPNLWLFRVE 139

[Close]

BLAST of MELO3C021911.jh1 vs. ExPASy TrEMBL
Match: A0A5D3D7X3 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold9G00080 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.21e-23
Identity = 59/89 (66.29%), Postives = 68/89 (76.40%), Query Frame = 0


Query: 1   METTTKERSMMSERLSKSMMRESSTTNMKENELSSSREIGYEKAKKKANTEDNNGDRNKF 60
           MET   ERSMMSER S+SM RES  T+ KEN+ S++RE G EKA KK+NTEDNNGDRNKF
Sbjct: 59  METVANERSMMSERSSESMARESQATSPKENKPSTNRETGSEKADKKSNTEDNNGDRNKF 118

Query: 61  KKVKMSVFNSEDPNSWLFRTQ-----HKL 84
           KKV+M VFN EDP+ WLF T+     HKL
Sbjct: 119 KKVEMLVFNDEDPDLWLFHTKRYFQIHKL 147

[Close]

BLAST of MELO3C021911.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CY52 (Histone-lysine N-methyltransferase ASHR1 isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G002220 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.60e-22
Identity = 57/81 (70.37%), Postives = 66/81 (81.48%), Query Frame = 0


Query: 1   METTTKERSMMSERLSKSMMRESSTTNMKENELSSSREIGYEKAKKKANTEDNNGDRNKF 60
           METT KERSMMSERLS+SM RES  T+ KEN+   SR+I  EKA KK +TEDNNGD+NKF
Sbjct: 59  METTEKERSMMSERLSESMSRESLATSTKENKPFISRKIDSEKADKKFDTEDNNGDQNKF 118

Query: 61  KKVKMSVFNSEDPNSWLFRTQ 81
           KKV+M VFN EDP+SWLFR +
Sbjct: 119 KKVEMPVFNGEDPDSWLFRAE 139

The following BLAST results are available for this feature:

BLAST of MELO3C021911.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0032052.1	8.73e-43	97.47	histone-lysine N-methyltransferase ASHR1 isoform X1 [Cucumis melo var. makuwa]	[more]
KAA0065531.1	2.32e-25	76.54	histone-lysine N-methyltransferase ASHR1 isoform X3 [Cucumis melo var. makuwa]	[more]
TYK29287.1	4.09e-25	76.54	transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]	[more]
TYK19603.1	2.50e-23	66.29	transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]	[more]
TYK16425.1	3.30e-22	70.37	histone-lysine N-methyltransferase ASHR1 isoform X3 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C021911.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C021911.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SLZ3	4.23e-43	97.47	Histone-lysine N-methyltransferase ASHR1 isoform X1 OS=Cucumis melo var. makuwa ...	[more]
A0A5A7VII2	1.12e-25	76.54	Histone-lysine N-methyltransferase ASHR1 isoform X3 OS=Cucumis melo var. makuwa ...	[more]
A0A5D3DZI1	1.98e-25	76.54	Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3D7X3	1.21e-23	66.29	Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3CY52	1.60e-22	70.37	Histone-lysine N-methyltransferase ASHR1 isoform X3 OS=Cucumis melo var. makuwa ...	[more]

BLAST of MELO3C021911.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..58

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C021911.jh1.t1	MELO3C021911.jh1.t1	mRNA