MELO3C021796 (gene) Melon (DHL92) v4

Overview


Name	MELO3C021796
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	transcription termination factor MTEF18, mitochondrial-like
Location	chr12: 17280549 .. 17281662 (-)
RNA-Seq Expression	MELO3C021796
Synteny	MELO3C021796

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCTTGCAAAGGCAAAGTTATTAAGCTTGTTAGTTGCTGCCCTTCACTTTTGATTGATCAGATCAGCATTGAGTTTTTCAAGGTTCTTGAGAGGCTAAGTAGGCTAGGTATTGAAAAAGATTGGATTGGAGGATATATATCTTGTGAAAGTACTTATTACTGGAACAGAATGGTTGACACTATGGACTTTCTAGTTAAAGTGGGTTATACAGAGATACAGATGCACAATTTGTTTAAATTCAAATCCCCATTGCTGTTTGAAGATTGTGGGAAGAAAGTGTATGTATTATTTGGTCGATTAGTCAAGTTAGGTTTTAAGAAGGACGAAGTGTACTCAATTTTTAAACAAAATCCTGAAATTTTGTCAGAGAAGTCTATTAAAAGCATTCAGAAAGCAGTGGATTTTCTCCTTGATATTGGGTTGGGAAGAGAATATATTTTGTGTATAGTAACTCAAAACATTCTACTACTTGGTTCATGCACTCTGAAAATCCCGAAAACCGTCTTTAAAGAACTTAAAGTTGGGAAGCAGGGTTTATGTCTGATCATTAGAGATGATCCGTCTAAGCTGTTTACGTTAGCTTCCAAATTAAAGCCAAAAACCGTTGAGCAGGCTTCTTGCCAATATTTGGAGAAGACTACATTTCTGCTGAAGTTGGGATACCACGAGAACTCGAAGGAGATGGCAAAGGCATTGAAACAGTTTCGTGGAAGAGGAGACCAACTACAGGAGAGATTTGATTGCCTGGTAAAAGCTGGTTTGGATTGTATTGCGTTAAAAGACATAATCAGACGAGCTCCCATGGTTCTAAACCAAAGCAAAGATGTACTCCAAGAGAAGATTGTTTATTTAAGAAACTGTTTAGGTTACCCTTTGAATACAATAATGACATTCCCAGCTTATTTAGGCTACAACAAGGAAAAAATCAGCGCAAGGTTTTCAATGTATAGGTGGTTAAGGGATAAAGGAGCTGCAAAGCCTAACTTATCATTGAGCACTATTTTAGCTTGTTCAGATGCAAGGTTTGTAAAATATTTTGTGAATGTTCATACTGAAGGTCCCTCCTCCAAGTGGGATAGTTTTAAAAAACAGGGTCTTCATATTCATAATTAA

mRNA sequence

GCCTTGCAAAGGCAAAGTTATTAAGCTTGTTAGTTGCTGCCCTTCACTTTTGATTGATCAGATCAGCATTGAGTTTTTCAAGGTTCTTGAGAGGCTAAGTAGGCTAGGTATTGAAAAAGATTGGATTGGAGGATATATATCTTGTGAAAGTACTTATTACTGGAACAGAATGGTTGACACTATGGACTTTCTAGTTAAAGTGGGTTATACAGAGATACAGATGCACAATTTGTTTAAATTCAAATCCCCATTGCTGTTTGAAGATTGTGGGAAGAAAGTGTATGTATTATTTGGTCGATTAGTCAAGTTAGGTTTTAAGAAGGACGAAGTGTACTCAATTTTTAAACAAAATCCTGAAATTTTGTCAGAGAAGTCTATTAAAAGCATTCAGAAAGCAGTGGATTTTCTCCTTGATATTGGGTTGGGAAGAGAATATATTTTGTGTATAGTAACTCAAAACATTCTACTACTTGGTTCATGCACTCTGAAAATCCCGAAAACCGTCTTTAAAGAACTTAAAGTTGGGAAGCAGGGTTTATGTCTGATCATTAGAGATGATCCGTCTAAGCTGTTTACGTTAGCTTCCAAATTAAAGCCAAAAACCGTTGAGCAGGCTTCTTGCCAATATTTGGAGAAGACTACATTTCTGCTGAAGTTGGGATACCACGAGAACTCGAAGGAGATGGCAAAGGCATTGAAACAGTTTCGTGGAAGAGGAGACCAACTACAGGAGAGATTTGATTGCCTGGTAAAAGCTGGTTTGGATTGTATTGCGTTAAAAGACATAATCAGACGAGCTCCCATGGTTCTAAACCAAAGCAAAGATGTACTCCAAGAGAAGATTGTTTATTTAAGAAACTGTTTAGGTTACCCTTTGAATACAATAATGACATTCCCAGCTTATTTAGGCTACAACAAGGAAAAAATCAGCGCAAGGTTTTCAATGTATAGGTGGTTAAGGGATAAAGGAGCTGCAAAGCCTAACTTATCATTGAGCACTATTTTAGCTTGTTCAGATGCAAGGTTTGTAAAATATTTTGTGAATGTTCATACTGAAGGTCCCTCCTCCAAGTGGGATAGTTTTAAAAAACAGGGTCTTCATATTCATAATTAA

Coding sequence (CDS)

CCTTGCAAAGGCAAAGTTATTAAGCTTGTTAGTTGCTGCCCTTCACTTTTGATTGATCAGATCAGCATTGAGTTTTTCAAGGTTCTTGAGAGGCTAAGTAGGCTAGGTATTGAAAAAGATTGGATTGGAGGATATATATCTTGTGAAAGTACTTATTACTGGAACAGAATGGTTGACACTATGGACTTTCTAGTTAAAGTGGGTTATACAGAGATACAGATGCACAATTTGTTTAAATTCAAATCCCCATTGCTGTTTGAAGATTGTGGGAAGAAAGTGTATGTATTATTTGGTCGATTAGTCAAGTTAGGTTTTAAGAAGGACGAAGTGTACTCAATTTTTAAACAAAATCCTGAAATTTTGTCAGAGAAGTCTATTAAAAGCATTCAGAAAGCAGTGGATTTTCTCCTTGATATTGGGTTGGGAAGAGAATATATTTTGTGTATAGTAACTCAAAACATTCTACTACTTGGTTCATGCACTCTGAAAATCCCGAAAACCGTCTTTAAAGAACTTAAAGTTGGGAAGCAGGGTTTATGTCTGATCATTAGAGATGATCCGTCTAAGCTGTTTACGTTAGCTTCCAAATTAAAGCCAAAAACCGTTGAGCAGGCTTCTTGCCAATATTTGGAGAAGACTACATTTCTGCTGAAGTTGGGATACCACGAGAACTCGAAGGAGATGGCAAAGGCATTGAAACAGTTTCGTGGAAGAGGAGACCAACTACAGGAGAGATTTGATTGCCTGGTAAAAGCTGGTTTGGATTGTATTGCGTTAAAAGACATAATCAGACGAGCTCCCATGGTTCTAAACCAAAGCAAAGATGTACTCCAAGAGAAGATTGTTTATTTAAGAAACTGTTTAGGTTACCCTTTGAATACAATAATGACATTCCCAGCTTATTTAGGCTACAACAAGGAAAAAATCAGCGCAAGGTTTTCAATGTATAGGTGGTTAAGGGATAAAGGAGCTGCAAAGCCTAACTTATCATTGAGCACTATTTTAGCTTGTTCAGATGCAAGGTTTGTAAAATATTTTGTGAATGTTCATACTGAAGGTCCCTCCTCCAAGTGGGATAGTTTTAAAAAACAGGGTCTTCATATTCATAATTAA

Protein sequence

PCKGKVIKLVSCCPSLLIDQISIEFFKVLERLSRLGIEKDWIGGYISCESTYYWNRMVDTMDFLVKVGYTEIQMHNLFKFKSPLLFEDCGKKVYVLFGRLVKLGFKKDEVYSIFKQNPEILSEKSIKSIQKAVDFLLDIGLGREYILCIVTQNILLLGSCTLKIPKTVFKELKVGKQGLCLIIRDDPSKLFTLASKLKPKTVEQASCQYLEKTTFLLKLGYHENSKEMAKALKQFRGRGDQLQERFDCLVKAGLDCIALKDIIRRAPMVLNQSKDVLQEKIVYLRNCLGYPLNTIMTFPAYLGYNKEKISARFSMYRWLRDKGAAKPNLSLSTILACSDARFVKYFVNVHTEGPSSKWDSFKKQGLHIHN

Homology

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BLAST of MELO3C021796 vs. ExPASy Swiss-Prot
Match: Q9M219 (Transcription termination factor MTEF18, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF18 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 5.1e-18
Identity = 69/281 (24.56%), Postives = 130/281 (46.26%), Query Frame = 0


Query: 98  GRLVKLGFKKDEVYSIFKQNPEILSEKSIKSIQKAVDFLLDIGLGREYILCIVTQNILLL 157
           G   + G  K++   +  +NP I++    K +      L   GL ++ +  +  +   + 
Sbjct: 272 GYFCRFGVSKEDAALLILRNPAIMNFDLEKPVISVTGMLKHFGLRQDEVDAVAQKYPYVF 331

Query: 158 GSCTLK----------IPKTVFKELKVGKQGLC---LIIRDDPSKLFTLASKLKPKTVEQ 217
           G   LK          + + +F  LK G   L     ++  D          L+     +
Sbjct: 332 GRNQLKNLPYVLRAIDLHERIFDILKNGNHHLLASYTLMDPDEDLEREYQEGLEELQNSR 391

Query: 218 ASCQYLEKTTFLLKLGYHENSKEMAKALKQFRGRGDQLQERFDCLVKAGLDCIALKDIIR 277
                ++K  FL ++G+ EN   M K L+   G   +L +RF  L+ +G+    +  +IR
Sbjct: 392 TKRHNIQKLDFLHEIGFGENGITM-KVLQHVHGTAVELHDRFQILLNSGIIFSKICMLIR 451

Query: 278 RAPMVLNQSKDVLQEKIVYLRNCLGYPLNTIMTFPAYLGYNKE-KISARFSMYRWLRDKG 337
            AP +LNQ    +Q+K+ +L   +G  L+ +  FPAYL ++ E +IS RF  ++WL +KG
Sbjct: 452 SAPKILNQKPHSIQDKLRFLCGEMGDSLDYLEVFPAYLCFDLENRISPRFRFHKWLVEKG 511

Query: 338 AAKPNLSLSTILACSDARFVKYFVNVHTEGPSSKWDSFKKQ 365
            ++ + S+++I+A S+  F+     +H   P   ++ F  +
Sbjct: 512 FSEKSYSIASIVATSEKAFIARLYGIHPAIPKHWFERFSSR 551

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BLAST of MELO3C021796 vs. ExPASy Swiss-Prot
Match: Q9C6A1 (Transcription termination factor MTERF15, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF15 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 4.7e-08
Identity = 64/260 (24.62%), Postives = 118/260 (45.38%), Query Frame = 0


Query: 100 LVKLGFKKDEVYSIFKQNPEILSEKSIKSIQKAVDFLLDIGLGREYI--LCIVTQNILLL 159
           L  LGF    V  I    P +L    I+ I++ ++FL+ IG+ R+ I     V   +L +
Sbjct: 154 LKSLGFCDSTVSRILSSFPGVLLVNEIE-IRRKIEFLVGIGIARDNIERFFHVFPEVLGI 213

Query: 160 GSCT-LKIPKTVFKELKVGKQGLCLIIRDDPSKLFTLASKLKPKTVE---QASCQYLEKT 219
           G+ T LK     F ++   K  +   I  +P  L     +L P+ +E      C+ + + 
Sbjct: 214 GTETRLKPLLDEFMKMGFSKDDVKKEIAREPRVLGLELGEL-PRCLELINTLKCREVIRV 273

Query: 220 TFLLKLGYHENSKEMAKALKQFRGRGDQLQERFDCLVKAGLDCIALKDIIRRAPMVLNQS 279
           + + +  +                 G +++ R DCL K GL       ++ + P V+   
Sbjct: 274 SIISEGAFR---------------AGFEVKLRVDCLCKYGLIRRDAFKVVWKEPRVILYE 333

Query: 280 KDVLQEKIVYLRNCLGYPLNTIMTFPAYLGYNKEK-ISARFSMYRWLRDKGAAKPNLSLS 339
            + +++KI +L N +G+ +N +   P YLG N +K I  R+++  +L+ KG    ++ L 
Sbjct: 334 IEDIEKKIEFLTNRMGFHINCLADVPEYLGVNLQKQIVPRYNVIDYLKLKGGLGCDIGLK 393

Query: 340 TILACSDARFVKYFVNVHTE 353
            ++  S  RF   +V  + E
Sbjct: 394 GLIKPSMKRFYNLYVMPYPE 396

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BLAST of MELO3C021796 vs. ExPASy Swiss-Prot
Match: Q9FK23 (Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF8 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 6.2e-08
Identity = 64/243 (26.34%), Postives = 106/243 (43.62%), Query Frame = 0


Query: 112 SIFKQNPEILSEKSIKSIQKAVDFLLDI-GLGREYILCI--VTQNILLLGSCTLKIPKTV 171
           ++ ++ P ILS  S++ +   V+FL    GL  E +  I  V  N++         P+  
Sbjct: 270 TVLRRLPAILS-YSVEHMNGQVEFLKSFAGLTSEQVFKIVHVFPNVISTSKERKLRPRIE 329

Query: 172 F-KELKVGKQGLCLIIRDDPSKLFTLASKLKPKTVEQASCQYLEKTTFLLKLGYHENSKE 231
           F KE      G+   +   P  L    + L              K  FL+K+GY   +KE
Sbjct: 330 FLKECGFDSPGMFKFLSKAPLILALSENNLS------------HKLGFLVKIGYKHRTKE 389

Query: 232 MAKALKQF-RGRGDQLQERFDCLVKAGLDCIALKDIIRRAPMVLNQSKDVLQEKIVYLRN 291
           +A A+    R   D +Q      +  GL    +  +  + P VL  +   L+EK+ YL  
Sbjct: 390 LAFAMGAVTRTSSDNMQRVIGLYLSYGLSFEDILAMSTKHPQVLQYNYTSLEEKLEYLIE 449

Query: 292 CLGYPLNTIMTFPAYLGYNKEKISARFSMYRWLRDKGAAKPNLSLSTILACSDARFVKYF 350
            +G  +  ++ FPA+LGY   K+ +R   +R+     +   N+SL+ +L  S  RF K  
Sbjct: 450 YMGREVEELLAFPAFLGY---KLDSRIK-HRYEEKLKSRGENMSLNKLLTVSAERFSKAA 495

[Close]

BLAST of MELO3C021796 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.7e-05
Identity = 69/339 (20.35%), Postives = 139/339 (41.00%), Query Frame = 0


Query: 24  EFFKVLERLSRLGIEKDWIGGYIS-CES--TYYWNRMVDTMDFLVKVGYTE----IQMHN 83
           E  +++E L   G+ +DW+G  +  C    ++    +   +DF +K+G  +      +++
Sbjct: 280 ELNEIVEYLESNGVRRDWMGYVVGRCPELLSFSMEEVKSRVDFFLKMGMNQNDFGTMVYD 339

Query: 84  LFKFKSPLLFEDCGKKVYVLFGRLVKLGFKKDEVYSIFKQNPEILSEKSIKSIQKAVDFL 143
             K      F+   KK+      L + G   +EV  +    P ++     +  +  V + 
Sbjct: 340 YPKIIGFFSFQVMEKKI----NYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYF 399

Query: 144 LDIGLGREYILCIVTQNILLLGSCTLKIPKTV------FKELKVGKQGLCLIIRDDPSKL 203
             +G+ +E +  I+    +L     + + KT+       +E+ +  + +  ++   PS L
Sbjct: 400 YYLGIPKEGMKRILVVKPILY---CIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLL 459

Query: 204 F-TLASKLKPKTVEQASCQYLEKTTFLLKLGYHENSKEMAKALKQFRGR-----GDQLQE 263
             +L  K++P  +            FLL        K++ K +           G +L+ 
Sbjct: 460 TNSLYKKIRPVVI------------FLLTRA-GVTQKDIGKVIAMDPALLGCSIGTKLEP 519

Query: 264 RFDCLVKAGLDCIALKDIIRRAPMVLNQSKDVLQEKIVYLRNCLGYPLNTIMTFPAYLGY 323
                +  G+    L ++I   PM+L  + D L+ K  YLR  +  PL  ++ FP +  Y
Sbjct: 520 NMRYYISLGIRFYQLGEMIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFPRFFSY 579

Query: 324 NKE-KISARFSMYRWLRDKGAAKPNLSLSTILACSDARF 343
           + E +I  R ++          + N  L  +LAC+D  F
Sbjct: 580 SLERRIIPRHTI------MVENRVNFKLRYMLACTDEEF 592

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BLAST of MELO3C021796 vs. NCBI nr
Match: TYK29366.1 (transcription termination factor MTEF18 [Cucumis melo var. makuwa])

HSP 1 Score: 604.4 bits (1557), Expect = 6.7e-169
Identity = 312/341 (91.50%), Postives = 312/341 (91.50%), Query Frame = 0


Query: 1   PCKGKVIKLVSCCPSLLIDQISIEFFKVLERLSRLGIEKDWIGGYISCESTYYWNRMVDT 60
           PCKGKVIKLVSCCPSLLIDQISIEFFKVLERLSR                          
Sbjct: 254 PCKGKVIKLVSCCPSLLIDQISIEFFKVLERLSR-------------------------- 313

Query: 61  MDFLVKVGYTEIQMHNLFKFKSPLLFEDCGKKVYVLFGRLVKLGFKKDEVYSIFKQNPEI 120
              LVKVGYTEIQMHNLFKFKSPLLFEDCGKKVYVLFGRLVKLGFKKDEVYSIFKQNPEI
Sbjct: 314 ---LVKVGYTEIQMHNLFKFKSPLLFEDCGKKVYVLFGRLVKLGFKKDEVYSIFKQNPEI 373

Query: 121 LSEKSIKSIQKAVDFLLDIGLGREYILCIVTQNILLLGSCTLKIPKTVFKELKVGKQGLC 180
           LSEKSIKSIQKAVDFLLDIGLGREYILCIVTQNILLLGSCTLKIPKTVFKELKVGKQGLC
Sbjct: 374 LSEKSIKSIQKAVDFLLDIGLGREYILCIVTQNILLLGSCTLKIPKTVFKELKVGKQGLC 433

Query: 181 LIIRDDPSKLFTLASKLKPKTVEQASCQYLEKTTFLLKLGYHENSKEMAKALKQFRGRGD 240
           LIIRDDPSKLFTLASKLKPKTVEQASCQYLEKTTFLLKLGYHENSKEMAKALKQFRGRGD
Sbjct: 434 LIIRDDPSKLFTLASKLKPKTVEQASCQYLEKTTFLLKLGYHENSKEMAKALKQFRGRGD 493

Query: 241 QLQERFDCLVKAGLDCIALKDIIRRAPMVLNQSKDVLQEKIVYLRNCLGYPLNTIMTFPA 300
           QLQERFDCLVKAGLDCIALKDIIRRAPMVLNQSKDVLQEKIVYLRNCLGYPLNTIMTFPA
Sbjct: 494 QLQERFDCLVKAGLDCIALKDIIRRAPMVLNQSKDVLQEKIVYLRNCLGYPLNTIMTFPA 553

Query: 301 YLGYNKEKISARFSMYRWLRDKGAAKPNLSLSTILACSDAR 342
           YLGYNKEKISARFSMYRWLRDKGAAKPNLSLSTILACSDAR
Sbjct: 554 YLGYNKEKISARFSMYRWLRDKGAAKPNLSLSTILACSDAR 565

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BLAST of MELO3C021796 vs. NCBI nr
Match: XP_038893610.1 (transcription termination factor MTEF18, mitochondrial [Benincasa hispida])

HSP 1 Score: 590.1 bits (1520), Expect = 1.3e-164
Identity = 302/372 (81.18%), Postives = 322/372 (86.56%), Query Frame = 0


Query: 3   KGKVIKLVSCCPSLLIDQISIEFFKVLERLSRLGIEKDWIGGYISCESTYYWNRMVDTMD 62
           KG VIKLV+CCPSLLI QIS+E FKVLE+L+RLGIEKDWIGG+ISC+STYYWNRMVDTMD
Sbjct: 224 KGTVIKLVTCCPSLLIGQISMELFKVLEKLNRLGIEKDWIGGHISCKSTYYWNRMVDTMD 283

Query: 63  FLVKVGYTEIQMHNLFKFKSPLLFEDCGKKVYVLFGRLVKLGFKKDEVYSIFKQNPEILS 122
           FLVKVGYTEIQMHNLFK   PLL ED GKK+YVLFGRLVKLG K DE YS+FKQNPEILS
Sbjct: 284 FLVKVGYTEIQMHNLFKSNPPLLLEDSGKKMYVLFGRLVKLGLKMDESYSMFKQNPEILS 343

Query: 123 EKSIKSIQKAVDFLLDIGLGREYILCIVTQNILLLGSCTLKIPKTVFKELKVGKQGLCLI 182
            K IK+I KAVDFL DIGLG E I CIVT NILLLGS TLK PKTV KELKVGK+ LC+I
Sbjct: 344 GKYIKNILKAVDFLFDIGLGTEDIACIVTHNILLLGSSTLKGPKTVCKELKVGKEDLCMI 403

Query: 183 IRDDPSKLFTLASKLKPKTVEQASCQ----YLEKTTFLLKLGYHENSKEMAKALKQFRGR 242
           IRDDPSKLFTLASK K KT EQ S Q    YLEKT FLLKLGY ENS EMAKALKQFRGR
Sbjct: 404 IRDDPSKLFTLASKSKLKTSEQVSSQDPAKYLEKTAFLLKLGYLENSNEMAKALKQFRGR 463

Query: 243 GDQLQERFDCLVKAGLDCIALKDIIRRAPMVLNQSKDVLQEKIVYLRNCLGYPLNTIMTF 302
           GDQLQERFDCLVKAGLDC  +  IIRRAPMVLNQSKDV++EKI  LRNCLGYPLNTI+TF
Sbjct: 464 GDQLQERFDCLVKAGLDCNVVTSIIRRAPMVLNQSKDVIEEKIDCLRNCLGYPLNTIVTF 523

Query: 303 PAYLGYNKEKISARFSMYRWLRDKGAAKPNLSLSTILACSDARFVKYFVNVHTEGPSSKW 362
           PAYL YN EKI+ RFSMYRWLRDKGAAKPNLSLST+LACSDA+FVKYFV+VH EGP S W
Sbjct: 524 PAYLCYNMEKINTRFSMYRWLRDKGAAKPNLSLSTVLACSDAKFVKYFVDVHPEGP-SMW 583

Query: 363 DSFKKQGLHIHN 371
           +SF KQGL  HN
Sbjct: 584 ESFNKQGLLNHN 594

[Close]

BLAST of MELO3C021796 vs. NCBI nr
Match: XP_023000703.1 (transcription termination factor MTEF18, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 557.0 bits (1434), Expect = 1.2e-154
Identity = 285/371 (76.82%), Postives = 312/371 (84.10%), Query Frame = 0


Query: 4   GKVIKLVSCCPSLLIDQISIEFFKVLERLSRLGIEKDWIGGYISCESTYYWNRMVDTMDF 63
           G VIKLVSCCPSLLI QI +EFFKVLE+LS+LGIEKDWIGGYIS +STY WNR+VDT+DF
Sbjct: 225 GTVIKLVSCCPSLLIGQIKMEFFKVLEKLSKLGIEKDWIGGYISYKSTYNWNRLVDTVDF 284

Query: 64  LVKVGYTEIQMHNLFKFKSPLLFEDCGKKVYVLFGRLVKLGFKKDEVYSIFKQNPEILSE 123
           L KVGYTEIQMH+LFK    LL ED GKKVYVLFGRLVKLG K DE YSI+KQNP ILS 
Sbjct: 285 LAKVGYTEIQMHDLFKSNPSLLLEDSGKKVYVLFGRLVKLGLKMDEAYSIYKQNPVILSG 344

Query: 124 KSIKSIQKAVDFLLDIGLGREYILCIVTQNILLLGSCTLKIPKTVFKELKVGKQGLCLII 183
             +K+I +AVDFL +IGLG E I  IV+  ILLLGSCTLK PKTV KELKVGK+GLCLII
Sbjct: 345 NYVKNILRAVDFLFEIGLGTEDIAGIVSHQILLLGSCTLKGPKTVCKELKVGKEGLCLII 404

Query: 184 RDDPSKLFTLASKLKPKTVEQASCQ----YLEKTTFLLKLGYHENSKEMAKALKQFRGRG 243
           RDDPSKLFTLASK K K+ EQASCQ     +EKT FLLKLGY ENS E+AKALKQFRGRG
Sbjct: 405 RDDPSKLFTLASKSKLKSSEQASCQNPAKQMEKTAFLLKLGYVENSDELAKALKQFRGRG 464

Query: 244 DQLQERFDCLVKAGLDCIALKDIIRRAPMVLNQSKDVLQEKIVYLRNCLGYPLNTIMTFP 303
           DQLQERFDCLV AGLDC  + +IIR APMVLNQSKDV+QEKI  LRNCLGYPL+TI  FP
Sbjct: 465 DQLQERFDCLVNAGLDCHVVTNIIRHAPMVLNQSKDVIQEKIDCLRNCLGYPLHTIAAFP 524

Query: 304 AYLGYNKEKISARFSMYRWLRDKGAAKPNLSLSTILACSDARFVKYFVNVHTEGPSSKWD 363
            YL YN E+I+ RFSMYRWLRDKGAAKPNLSLST+LACSDARFVKYFV+VH EGP S W+
Sbjct: 525 VYLCYNMERINTRFSMYRWLRDKGAAKPNLSLSTVLACSDARFVKYFVDVHPEGP-SMWE 584

Query: 364 SFKKQGLHIHN 371
           S KK GLH H+
Sbjct: 585 SCKKHGLHNHS 594

[Close]

BLAST of MELO3C021796 vs. NCBI nr
Match: KAG7019433.1 (Transcription termination factor MTEF18, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 555.4 bits (1430), Expect = 3.6e-154
Identity = 283/371 (76.28%), Postives = 312/371 (84.10%), Query Frame = 0


Query: 4   GKVIKLVSCCPSLLIDQISIEFFKVLERLSRLGIEKDWIGGYISCESTYYWNRMVDTMDF 63
           G VIKLVSCCPSLLI QI +EF KVLE+LS+LGIE+DWIGGYIS +STY WNR+VDT+DF
Sbjct: 210 GTVIKLVSCCPSLLIGQIKMEFIKVLEKLSKLGIEEDWIGGYISHKSTYNWNRLVDTLDF 269

Query: 64  LVKVGYTEIQMHNLFKFKSPLLFEDCGKKVYVLFGRLVKLGFKKDEVYSIFKQNPEILSE 123
           L KVGYTEIQMH+LFK    LL ED GKKVYVLFGRLVKLG K DE YSI+KQNP ILS 
Sbjct: 270 LAKVGYTEIQMHDLFKSNPSLLLEDSGKKVYVLFGRLVKLGLKMDEAYSIYKQNPVILSG 329

Query: 124 KSIKSIQKAVDFLLDIGLGREYILCIVTQNILLLGSCTLKIPKTVFKELKVGKQGLCLII 183
           K +K+I +AVDFL DIGLG E I  IV+  ILLLGSCTLK PKTV KELKVGK+GLCLII
Sbjct: 330 KYVKNILRAVDFLFDIGLGTEDIAGIVSHQILLLGSCTLKGPKTVCKELKVGKEGLCLII 389

Query: 184 RDDPSKLFTLASKLKPKTVEQASCQ----YLEKTTFLLKLGYHENSKEMAKALKQFRGRG 243
           RDDPSKLFTLASK K K+ EQASCQ     +EKTTFLLKLGY ENS E+AKA KQFRGRG
Sbjct: 390 RDDPSKLFTLASKSKLKSSEQASCQNPAKQMEKTTFLLKLGYVENSDELAKASKQFRGRG 449

Query: 244 DQLQERFDCLVKAGLDCIALKDIIRRAPMVLNQSKDVLQEKIVYLRNCLGYPLNTIMTFP 303
           DQLQERFDCLV AGLDC  + +I+R APMVLNQSKD++QEKI  LRNCLGYPL+TI  FP
Sbjct: 450 DQLQERFDCLVNAGLDCHVVTNIVRHAPMVLNQSKDIIQEKIDCLRNCLGYPLHTIAAFP 509

Query: 304 AYLGYNKEKISARFSMYRWLRDKGAAKPNLSLSTILACSDARFVKYFVNVHTEGPSSKWD 363
            YL YN E+I+ RFSMYRWLRDKGAAKPNLSLST+LACSDARFVKYFV+VH EGP S W+
Sbjct: 510 VYLCYNMERINTRFSMYRWLRDKGAAKPNLSLSTVLACSDARFVKYFVDVHPEGP-SMWE 569

Query: 364 SFKKQGLHIHN 371
           S KK GLH H+
Sbjct: 570 SCKKHGLHNHS 579

[Close]

BLAST of MELO3C021796 vs. NCBI nr
Match: KAG6583809.1 (Transcription termination factor MTEF18, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 553.9 bits (1426), Expect = 1.0e-153
Identity = 282/371 (76.01%), Postives = 311/371 (83.83%), Query Frame = 0


Query: 4   GKVIKLVSCCPSLLIDQISIEFFKVLERLSRLGIEKDWIGGYISCESTYYWNRMVDTMDF 63
           G VIKLVSCCPSLLI QI +EF KVLE+LS+LGIE+DWIGGYIS +STY WNR+VDT+DF
Sbjct: 210 GTVIKLVSCCPSLLIGQIKMEFIKVLEKLSKLGIEEDWIGGYISHKSTYNWNRLVDTLDF 269

Query: 64  LVKVGYTEIQMHNLFKFKSPLLFEDCGKKVYVLFGRLVKLGFKKDEVYSIFKQNPEILSE 123
           L KVGYTEIQMH+LFK    LL ED GKKVYVLFGR VKLG K DE YSI+KQNP ILS 
Sbjct: 270 LAKVGYTEIQMHDLFKSNPSLLLEDSGKKVYVLFGRFVKLGLKMDEAYSIYKQNPVILSG 329

Query: 124 KSIKSIQKAVDFLLDIGLGREYILCIVTQNILLLGSCTLKIPKTVFKELKVGKQGLCLII 183
           K +K+I +AVDFL DIGLG E I  IV+  ILLLGSCTLK PKTV KELKVGK+GLCLII
Sbjct: 330 KYVKNILRAVDFLFDIGLGTEDIAGIVSHQILLLGSCTLKGPKTVCKELKVGKEGLCLII 389

Query: 184 RDDPSKLFTLASKLKPKTVEQASCQ----YLEKTTFLLKLGYHENSKEMAKALKQFRGRG 243
           RDDPSKLFTLASK K K+ EQASCQ     +EKTTFLLKLGY ENS E+AKA KQFRGRG
Sbjct: 390 RDDPSKLFTLASKSKLKSSEQASCQNPAKQMEKTTFLLKLGYVENSDELAKASKQFRGRG 449

Query: 244 DQLQERFDCLVKAGLDCIALKDIIRRAPMVLNQSKDVLQEKIVYLRNCLGYPLNTIMTFP 303
           DQLQERFDCLV AGLDC  + +I+R APMVLNQSKD++QEKI  LRNCLGYPL+TI  FP
Sbjct: 450 DQLQERFDCLVNAGLDCHVVTNIVRHAPMVLNQSKDIIQEKIDCLRNCLGYPLHTIAAFP 509

Query: 304 AYLGYNKEKISARFSMYRWLRDKGAAKPNLSLSTILACSDARFVKYFVNVHTEGPSSKWD 363
            YL YN E+I+ RFSMYRWLRDKGAAKPNLSLST+LACSDARFVKYFV+VH EGP S W+
Sbjct: 510 VYLCYNMERINTRFSMYRWLRDKGAAKPNLSLSTVLACSDARFVKYFVDVHPEGP-SMWE 569

Query: 364 SFKKQGLHIHN 371
           S KK GLH H+
Sbjct: 570 SCKKHGLHNHS 579

[Close]

BLAST of MELO3C021796 vs. ExPASy TrEMBL
Match: A0A5D3E0D7 (Transcription termination factor MTEF18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold129G00860 PE=3 SV=1)

HSP 1 Score: 604.4 bits (1557), Expect = 3.3e-169
Identity = 312/341 (91.50%), Postives = 312/341 (91.50%), Query Frame = 0


Query: 1   PCKGKVIKLVSCCPSLLIDQISIEFFKVLERLSRLGIEKDWIGGYISCESTYYWNRMVDT 60
           PCKGKVIKLVSCCPSLLIDQISIEFFKVLERLSR                          
Sbjct: 254 PCKGKVIKLVSCCPSLLIDQISIEFFKVLERLSR-------------------------- 313

Query: 61  MDFLVKVGYTEIQMHNLFKFKSPLLFEDCGKKVYVLFGRLVKLGFKKDEVYSIFKQNPEI 120
              LVKVGYTEIQMHNLFKFKSPLLFEDCGKKVYVLFGRLVKLGFKKDEVYSIFKQNPEI
Sbjct: 314 ---LVKVGYTEIQMHNLFKFKSPLLFEDCGKKVYVLFGRLVKLGFKKDEVYSIFKQNPEI 373

Query: 121 LSEKSIKSIQKAVDFLLDIGLGREYILCIVTQNILLLGSCTLKIPKTVFKELKVGKQGLC 180
           LSEKSIKSIQKAVDFLLDIGLGREYILCIVTQNILLLGSCTLKIPKTVFKELKVGKQGLC
Sbjct: 374 LSEKSIKSIQKAVDFLLDIGLGREYILCIVTQNILLLGSCTLKIPKTVFKELKVGKQGLC 433

Query: 181 LIIRDDPSKLFTLASKLKPKTVEQASCQYLEKTTFLLKLGYHENSKEMAKALKQFRGRGD 240
           LIIRDDPSKLFTLASKLKPKTVEQASCQYLEKTTFLLKLGYHENSKEMAKALKQFRGRGD
Sbjct: 434 LIIRDDPSKLFTLASKLKPKTVEQASCQYLEKTTFLLKLGYHENSKEMAKALKQFRGRGD 493

Query: 241 QLQERFDCLVKAGLDCIALKDIIRRAPMVLNQSKDVLQEKIVYLRNCLGYPLNTIMTFPA 300
           QLQERFDCLVKAGLDCIALKDIIRRAPMVLNQSKDVLQEKIVYLRNCLGYPLNTIMTFPA
Sbjct: 494 QLQERFDCLVKAGLDCIALKDIIRRAPMVLNQSKDVLQEKIVYLRNCLGYPLNTIMTFPA 553

Query: 301 YLGYNKEKISARFSMYRWLRDKGAAKPNLSLSTILACSDAR 342
           YLGYNKEKISARFSMYRWLRDKGAAKPNLSLSTILACSDAR
Sbjct: 554 YLGYNKEKISARFSMYRWLRDKGAAKPNLSLSTILACSDAR 565

[Close]

BLAST of MELO3C021796 vs. ExPASy TrEMBL
Match: A0A6J1KND2 (transcription termination factor MTEF18, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111495068 PE=3 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 6.0e-155
Identity = 285/371 (76.82%), Postives = 312/371 (84.10%), Query Frame = 0


Query: 4   GKVIKLVSCCPSLLIDQISIEFFKVLERLSRLGIEKDWIGGYISCESTYYWNRMVDTMDF 63
           G VIKLVSCCPSLLI QI +EFFKVLE+LS+LGIEKDWIGGYIS +STY WNR+VDT+DF
Sbjct: 225 GTVIKLVSCCPSLLIGQIKMEFFKVLEKLSKLGIEKDWIGGYISYKSTYNWNRLVDTVDF 284

Query: 64  LVKVGYTEIQMHNLFKFKSPLLFEDCGKKVYVLFGRLVKLGFKKDEVYSIFKQNPEILSE 123
           L KVGYTEIQMH+LFK    LL ED GKKVYVLFGRLVKLG K DE YSI+KQNP ILS 
Sbjct: 285 LAKVGYTEIQMHDLFKSNPSLLLEDSGKKVYVLFGRLVKLGLKMDEAYSIYKQNPVILSG 344

Query: 124 KSIKSIQKAVDFLLDIGLGREYILCIVTQNILLLGSCTLKIPKTVFKELKVGKQGLCLII 183
             +K+I +AVDFL +IGLG E I  IV+  ILLLGSCTLK PKTV KELKVGK+GLCLII
Sbjct: 345 NYVKNILRAVDFLFEIGLGTEDIAGIVSHQILLLGSCTLKGPKTVCKELKVGKEGLCLII 404

Query: 184 RDDPSKLFTLASKLKPKTVEQASCQ----YLEKTTFLLKLGYHENSKEMAKALKQFRGRG 243
           RDDPSKLFTLASK K K+ EQASCQ     +EKT FLLKLGY ENS E+AKALKQFRGRG
Sbjct: 405 RDDPSKLFTLASKSKLKSSEQASCQNPAKQMEKTAFLLKLGYVENSDELAKALKQFRGRG 464

Query: 244 DQLQERFDCLVKAGLDCIALKDIIRRAPMVLNQSKDVLQEKIVYLRNCLGYPLNTIMTFP 303
           DQLQERFDCLV AGLDC  + +IIR APMVLNQSKDV+QEKI  LRNCLGYPL+TI  FP
Sbjct: 465 DQLQERFDCLVNAGLDCHVVTNIIRHAPMVLNQSKDVIQEKIDCLRNCLGYPLHTIAAFP 524

Query: 304 AYLGYNKEKISARFSMYRWLRDKGAAKPNLSLSTILACSDARFVKYFVNVHTEGPSSKWD 363
            YL YN E+I+ RFSMYRWLRDKGAAKPNLSLST+LACSDARFVKYFV+VH EGP S W+
Sbjct: 525 VYLCYNMERINTRFSMYRWLRDKGAAKPNLSLSTVLACSDARFVKYFVDVHPEGP-SMWE 584

Query: 364 SFKKQGLHIHN 371
           S KK GLH H+
Sbjct: 585 SCKKHGLHNHS 594

[Close]

BLAST of MELO3C021796 vs. ExPASy TrEMBL
Match: A0A6J1EHL0 (transcription termination factor MTEF18, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111434165 PE=3 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 1.2e-152
Identity = 281/371 (75.74%), Postives = 310/371 (83.56%), Query Frame = 0


Query: 4   GKVIKLVSCCPSLLIDQISIEFFKVLERLSRLGIEKDWIGGYISCESTYYWNRMVDTMDF 63
           G VIKLVSCCPSLLI QI +EF KVLE+LS+LGIE+DWIGGYIS +STY WNR+VDT+DF
Sbjct: 225 GTVIKLVSCCPSLLIGQIKMEFIKVLEKLSKLGIEEDWIGGYISHKSTYNWNRLVDTVDF 284

Query: 64  LVKVGYTEIQMHNLFKFKSPLLFEDCGKKVYVLFGRLVKLGFKKDEVYSIFKQNPEILSE 123
           L KVGYTEIQMH+LFK    LL ED GKKVYVLFGRLVKLG K +E YSI+KQNP ILS 
Sbjct: 285 LAKVGYTEIQMHDLFKSNPSLLLEDSGKKVYVLFGRLVKLGLKMNEAYSIYKQNPVILSG 344

Query: 124 KSIKSIQKAVDFLLDIGLGREYILCIVTQNILLLGSCTLKIPKTVFKELKVGKQGLCLII 183
           K +K+I +AVDFL DIGLG E I  IV+  ILLLGSCTLK PKTV KELKVGK+GLCLII
Sbjct: 345 KYVKNILRAVDFLFDIGLGTEDIAGIVSHQILLLGSCTLKGPKTVCKELKVGKEGLCLII 404

Query: 184 RDDPSKLFTLASKLKPKTVEQASCQ----YLEKTTFLLKLGYHENSKEMAKALKQFRGRG 243
           RDDPSKLF LASK K K+ EQASCQ     +EKTTFLLKLGY ENS E+AKA KQFRGRG
Sbjct: 405 RDDPSKLFALASKSKLKSSEQASCQNPAKQMEKTTFLLKLGYVENSDELAKASKQFRGRG 464

Query: 244 DQLQERFDCLVKAGLDCIALKDIIRRAPMVLNQSKDVLQEKIVYLRNCLGYPLNTIMTFP 303
           DQLQERFDCLV AGLDC  + +I+R APMVLNQSKDV+QEKI  LRNCLGYPL+TI  FP
Sbjct: 465 DQLQERFDCLVNAGLDCHVVTNIVRHAPMVLNQSKDVIQEKIDCLRNCLGYPLHTIAAFP 524

Query: 304 AYLGYNKEKISARFSMYRWLRDKGAAKPNLSLSTILACSDARFVKYFVNVHTEGPSSKWD 363
            YL Y  E+I+ RFSMYRWLRDKGAAKPNLSLST+LACSDARFVKYFV+VH EGP S W+
Sbjct: 525 VYLCYKMERINTRFSMYRWLRDKGAAKPNLSLSTVLACSDARFVKYFVDVHPEGP-SMWE 584

Query: 364 SFKKQGLHIHN 371
           S KK GLH H+
Sbjct: 585 SCKKHGLHNHS 594

[Close]

BLAST of MELO3C021796 vs. ExPASy TrEMBL
Match: A0A6J1CKT4 (transcription termination factor MTEF18, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111012532 PE=3 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 5.2e-151
Identity = 275/372 (73.92%), Postives = 312/372 (83.87%), Query Frame = 0


Query: 3   KGKVIKLVSCCPSLLIDQISIEFFKVLERLSRLGIEKDWIGGYISCESTYYWNRMVDTMD 62
           KG VIKLVSCCPSLL  +IS+EFFKVLE+LSRLGI KDWIGGYISC +TY WNRM++TMD
Sbjct: 222 KGTVIKLVSCCPSLLXGRISMEFFKVLEKLSRLGIGKDWIGGYISCRNTYNWNRMLNTMD 281

Query: 63  FLVKVGYTEIQMHNLFKFKSPLLFEDCGKKVYVLFGRLVKLGFKKDEVYSIFKQNPEILS 122
           FL KVGYTEIQMHNLF+    LL ED GKKVYVLFGRLVKLG K DE YS+F Q+PEILS
Sbjct: 282 FLAKVGYTEIQMHNLFESNPSLLLEDSGKKVYVLFGRLVKLGLKMDEAYSMFIQHPEILS 341

Query: 123 EKSIKSIQKAVDFLLDIGLGREYILCIVTQNILLLGSCTLKIPKTVFKELKVGKQGLCLI 182
            K +K+I +A+DFL D+GLG E I  IV+ +ILLLGSCTLK P+TV KELKVGK+ LC I
Sbjct: 342 GKFVKNILRAIDFLFDVGLGTEDITSIVSHHILLLGSCTLKGPRTVCKELKVGKESLCXI 401

Query: 183 IRDDPSKLFTLASKLKPKTVEQASC----QYLEKTTFLLKLGYHENSKEMAKALKQFRGR 242
           IRDDPSKLFTLASK K K+  Q SC    + LEKTTFLLKLGY ENS EMAKALK+FRGR
Sbjct: 402 IRDDPSKLFTLASKSKLKSSXQDSCPDPTKRLEKTTFLLKLGYLENSDEMAKALKRFRGR 461

Query: 243 GDQLQERFDCLVKAGLDCIALKDIIRRAPMVLNQSKDVLQEKIVYLRNCLGYPLNTIMTF 302
           GDQLQERFDCLVKAGLDC  + +IIR+APMVLNQSKDV+QEKI  LRNCLGYPL+TI+ F
Sbjct: 462 GDQLQERFDCLVKAGLDCNVVTNIIRQAPMVLNQSKDVIQEKIDCLRNCLGYPLDTIVAF 521

Query: 303 PAYLGYNKEKISARFSMYRWLRDKGAAKPNLSLSTILACSDARFVKYFVNVHTEGPSSKW 362
           PAYL YN E+I+ RFSMYRWLRDKG+AKPNLSLS++L CSDARFVKYFV+VH EG  + W
Sbjct: 522 PAYLCYNMERINTRFSMYRWLRDKGSAKPNLSLSSVLVCSDARFVKYFVDVHPEG-HTMW 581

Query: 363 DSFKKQGLHIHN 371
           + FK+  +H HN
Sbjct: 582 EIFKRHRIHNHN 592

[Close]

BLAST of MELO3C021796 vs. ExPASy TrEMBL
Match: A0A2N9ISM1 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55025 PE=3 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 4.0e-127
Identity = 237/364 (65.11%), Postives = 285/364 (78.30%), Query Frame = 0


Query: 3   KGKVIKLVSCCPSLLIDQISIEFFKVLERLSRLGIEKDWIGGYISCESTYYWNRMVDTMD 62
           K  VIKL+SCCPSLLI  ++ EF KVLERL  L  E DWIGGY+S +STY WNRM+DT+ 
Sbjct: 208 KPTVIKLISCCPSLLIGGVNCEFVKVLERLKELRFENDWIGGYLSGKSTYNWNRMLDTVI 267

Query: 63  FLVKVGYTEIQMHNLFKFKSPLLFEDCGKKVYVLFGRLVKLGFKKDEVYSIFKQNPEILS 122
           FL  VGY+E QM  LF     LLFE  GK VYVLFGRL+K G K +E+YS+F QNP ILS
Sbjct: 268 FLDTVGYSEEQMRYLFNTNPALLFEGSGKNVYVLFGRLLKSGLKMNEIYSLFIQNPNILS 327

Query: 123 EKSIKSIQKAVDFLLDIGLGREYILCIVTQNILLLGSCTLKIPKTVFKELKVGKQGLCLI 182
            K IK++ +AVDFLL+I +G EYI  I++ +I LLGSCTLK PKTV KELKVG+ GLC I
Sbjct: 328 VKCIKNLLRAVDFLLEIEMGTEYIASIISNHIQLLGSCTLKGPKTVCKELKVGRDGLCQI 387

Query: 183 IRDDPSKLFTLASKLKPKTVEQASCQ----YLEKTTFLLKLGYHENSKEMAKALKQFRGR 242
           I++DP KLF LASK K K+ EQAS Q    + EKTTFL++LGY ENS EM KALKQFRGR
Sbjct: 388 IKEDPLKLFNLASKSKIKSSEQASSQDPSKHQEKTTFLMRLGYMENSDEMMKALKQFRGR 447

Query: 243 GDQLQERFDCLVKAGLDCIALKDIIRRAPMVLNQSKDVLQEKIVYLRNCLGYPLNTIMTF 302
           GDQLQERFDCLV+AGLDC  + +++++APMVLNQ+KDV+++KI  LRN L YPL +++ F
Sbjct: 448 GDQLQERFDCLVQAGLDCNTVTNMVKQAPMVLNQTKDVIEKKIDCLRNYLAYPLESVVAF 507

Query: 303 PAYLGYNKEKISARFSMYRWLRDKGAAKPNLSLSTILACSDARFVKYFVNVHTEGPSSKW 362
           PAYL Y+ E+IS RFSMY WLR++GAAKP LSLSTILACSD RFVKYFV+VH EGP + W
Sbjct: 508 PAYLCYDMERISQRFSMYVWLRERGAAKPTLSLSTILACSDTRFVKYFVDVHPEGP-ALW 567

[Close]

BLAST of MELO3C021796 vs. TAIR 10
Match: AT4G19650.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 369.8 bits (948), Expect = 2.6e-102
Identity = 190/364 (52.20%), Postives = 254/364 (69.78%), Query Frame = 0


Query: 3   KGKVIKLVSCCPSLLIDQISIEFFKVLERLSRLGIEKDWIGGYISCESTYYWNRMVDTMD 62
           K  VIKLV+ CP LL+  I  EF  V+++L  L +  DW+G Y+S   TY W R+++T++
Sbjct: 210 KATVIKLVTSCPLLLVGGIDAEFSSVVDKLKGLQVGCDWLGRYLSDRKTYSWRRILETIE 269

Query: 63  FLVKVGYTEIQMHNLFKFKSPLLFEDCGKKVYVLFGRLVKLGFKKDEVYSIFKQNPEILS 122
           FL KVG  E ++ +L K    L+ E  GKK YVLFGRL K G + +E+Y +F  NPE+LS
Sbjct: 270 FLDKVGCKEEKLSSLLKTYPALVIEGSGKKFYVLFGRLFKAGLQVNEIYRLFIDNPEMLS 329

Query: 123 EKSIKSIQKAVDFLLDIGLGREYILCIVTQNILLLGSCTLKIPKTVFKELKVGKQGLCLI 182
           +K +K+IQK +DFL+ I +  ++I  I+  ++ L+GSC+L  P+T    L V +  LC I
Sbjct: 330 DKCVKNIQKTLDFLIAIRMETQFITKILLSHMELIGSCSLPAPRTACLSLNVKQDELCKI 389

Query: 183 IRDDPSKLFTLAS---KLKPKTVEQASCQYLEKTTFLLKLGYHENSKEMAKALKQFRGRG 242
           ++ +P +LF   S   K K K + + S +YLEKT FLL+LGY ENS EM KALKQFRGRG
Sbjct: 390 LKKEPLRLFCFVSTTKKRKSKPLSEDSRKYLEKTEFLLRLGYVENSDEMVKALKQFRGRG 449

Query: 243 DQLQERFDCLVKAGLDCIALKDIIRRAPMVLNQSKDVLQEKIVYLRNCLGYPLNTIMTFP 302
           DQLQERFDCLVKAGL+   + +IIR APM+LN SKDV+++KI  L   LGYP+ +++ FP
Sbjct: 450 DQLQERFDCLVKAGLNYNVVTEIIRHAPMILNLSKDVIEKKIHSLTELLGYPIESLVRFP 509

Query: 303 AYLGYNKEKISARFSMYRWLRDKGAAKPNLSLSTILACSDARFVKYFVNVHTEGPSSKWD 362
           AYL Y+ ++I  RFSMY WLR++ AAKP LS STIL C DARFVKYFVNVH EGP+  W+
Sbjct: 510 AYLCYDMQRIHHRFSMYLWLRERDAAKPMLSPSTILTCGDARFVKYFVNVHPEGPAI-WE 569

Query: 363 SFKK 364
           S  +
Sbjct: 570 SINQ 572

[Close]

BLAST of MELO3C021796 vs. TAIR 10
Match: AT5G45113.1 (mitochondrial transcription termination factor-related / mTERF-related )

HSP 1 Score: 310.8 bits (795), Expect = 1.4e-84
Identity = 154/363 (42.42%), Postives = 239/363 (65.84%), Query Frame = 0


Query: 3   KGKVIKLVSCCPSLLIDQISIEFFKVLERLSRLGIEKDWIGGYISCESTYYWNRMVDTMD 62
           K  VIKLV+CCP LL+  I  EF  V+ +L  L +  DW+  Y+S   TY W R+++TM+
Sbjct: 50  KAIVIKLVTCCPLLLVGGIDCEFVSVVNKLKGLNLGCDWLARYLSVRKTYNWRRILETME 109

Query: 63  FLVKVGYTEIQMHNLFKFKSPLLFEDCGKKVYVLFGRLVKLGFKKDEVYSIFKQNPEILS 122
            L KVG+ E ++ NL K    L+ E  G K Y++F +  K+G + +E+  +   N E+L 
Sbjct: 110 LLEKVGFKEKKLSNLLKAYPDLVGETSGNKAYIMFEKFHKVGLQMNEIDKLLIDNSEMLL 169

Query: 123 EKSIKSIQKAVDFLLDIGLGREYILCIVTQNILLLGSCTLKIPKTVFKELKVGKQGLCLI 182
           EKS+K I +A+ FL  I + +++++  +  ++  + S +L +P+ V+  LK+ +  LC I
Sbjct: 170 EKSVKRILEALKFLKCIRIEKQFVVRFLQCHMKHICSSSLLVPRAVWNRLKIRRDELCQI 229

Query: 183 IRDDPSKLFTLASKLKPKTVEQAS--CQYLEKTTFLLKLGYHENSKEMAKALKQFRGRGD 242
           I+++P +LF++ASK     +E  S   +  EKTTFLLKLGY ENS EM +ALK+F+GRGD
Sbjct: 230 IKEEPLRLFSIASKTNKGRIELDSLDSRNAEKTTFLLKLGYVENSDEMVRALKKFQGRGD 289

Query: 243 QLQERFDCLVKAGLDCIALKDIIRRAPMVLNQSKDVLQEKIVYLRNCLGYPLNTIMTFPA 302
           +LQERFDC VKAGLD   +  +++RAP +LN+ KD++++KI+ L + L YP+ +++  P 
Sbjct: 290 ELQERFDCFVKAGLDYNVVSQLVKRAPHILNRPKDIIEKKIIMLIDYLVYPIESVIESPT 349

Query: 303 YLGYNKEKISARFSMYRWLRDKGAAKPNLSLSTILACSDARFVKYFVNVHTEGPSSKWDS 362
           YL Y+ ++I  RF+MY WLR++ A  P L+L T++  S+   V YFVN H EGP++ W++
Sbjct: 350 YLCYSMKRIHQRFTMYIWLRERDAVIPRLTLGTVVGISNTLIVPYFVNTHPEGPAT-WEN 409

Query: 363 FKK 364
            KK
Sbjct: 410 IKK 411

[Close]

BLAST of MELO3C021796 vs. TAIR 10
Match: AT5G06810.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 232.3 bits (591), Expect = 6.5e-61
Identity = 135/353 (38.24%), Postives = 205/353 (58.07%), Query Frame = 0


Query: 8    KLVSCCPSLLIDQISIEFFKVLERLSRLGIEKDWIGGYISCESTYYWNRMVDTMDFLVKV 67
            KL+ C PS+LI  +++   KV+E L  +G   DW+   +S E +Y W+ M   + FL  +
Sbjct: 777  KLIVCSPSILIGDMNVGLAKVMEMLKAIGFGVDWVTENLSEEVSYDWSSMHRCLSFLRDL 836

Query: 68   GYTEIQMHNLFKFKSPLLFEDCGKKVYVLFGRLVKLGFKKDEVYSIFKQNPEILS-EKSI 127
               E ++  L +    L+FED G+   +L G   KLG  + E+ S+F++ P+  S  K +
Sbjct: 837  YVDENELCELIRKMPRLIFEDSGEWTLILAGFEAKLGSSRSELSSLFQKFPQCQSLGKFV 896

Query: 128  KSIQKAVDFLLDIGLGREYILCIVTQNILLLGSCTLKIPKTVFKELKVGKQGLCLIIRDD 187
             +++    FL DI +  + I  I   + L +G   LK   T+   LK GK  LC +I+++
Sbjct: 897  LNLRHCFLFLKDIEMDDDEIGKIFRLHSLWIGVSRLKQTSTLLINLKGGKGRLCQVIQEN 956

Query: 188  PSKLFTLASKLK----PKTVEQASCQ-YLEKTTFLLKLGYHENSKEMAKALKQFRGRGDQ 247
            P ++      L+    P T  + + +    KT FLL LGY ENS+EM +ALK FRG+G +
Sbjct: 957  PEEMKKWIMGLRVQPLPATGYKVNTKSKTMKTQFLLDLGYKENSEEMERALKNFRGKGSE 1016

Query: 248  LQERFDCLVKAGLDCIALKDIIRRAPMVLNQSKDVLQEKIVYLRNCLGYPLNTIMTFPAY 307
            L+ERF+ LV  GL    +KD+++  P +L Q+ D+L+ K+ YL   LGYPL+T++TFP  
Sbjct: 1017 LRERFNVLVSFGLTEKDVKDMVKACPSILTQACDILESKVNYLVKELGYPLSTLVTFPTC 1076

Query: 308  LGYNKEKISARFSMYRWLRDKGAAKPNLSLSTILACSDARFVKYFVNVHTEGP 355
            L Y  +++  RFSM+ WL+D+G A P L +STIL CSD  F   FVN H +GP
Sbjct: 1077 LKYTLQRMKLRFSMFSWLQDRGKADPKLQVSTILVCSDKFFATRFVNRHPDGP 1129

[Close]

BLAST of MELO3C021796 vs. TAIR 10
Match: AT3G60400.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 93.6 bits (231), Expect = 3.6e-19
Identity = 69/281 (24.56%), Postives = 130/281 (46.26%), Query Frame = 0


Query: 98  GRLVKLGFKKDEVYSIFKQNPEILSEKSIKSIQKAVDFLLDIGLGREYILCIVTQNILLL 157
           G   + G  K++   +  +NP I++    K +      L   GL ++ +  +  +   + 
Sbjct: 272 GYFCRFGVSKEDAALLILRNPAIMNFDLEKPVISVTGMLKHFGLRQDEVDAVAQKYPYVF 331

Query: 158 GSCTLK----------IPKTVFKELKVGKQGLC---LIIRDDPSKLFTLASKLKPKTVEQ 217
           G   LK          + + +F  LK G   L     ++  D          L+     +
Sbjct: 332 GRNQLKNLPYVLRAIDLHERIFDILKNGNHHLLASYTLMDPDEDLEREYQEGLEELQNSR 391

Query: 218 ASCQYLEKTTFLLKLGYHENSKEMAKALKQFRGRGDQLQERFDCLVKAGLDCIALKDIIR 277
                ++K  FL ++G+ EN   M K L+   G   +L +RF  L+ +G+    +  +IR
Sbjct: 392 TKRHNIQKLDFLHEIGFGENGITM-KVLQHVHGTAVELHDRFQILLNSGIIFSKICMLIR 451

Query: 278 RAPMVLNQSKDVLQEKIVYLRNCLGYPLNTIMTFPAYLGYNKE-KISARFSMYRWLRDKG 337
            AP +LNQ    +Q+K+ +L   +G  L+ +  FPAYL ++ E +IS RF  ++WL +KG
Sbjct: 452 SAPKILNQKPHSIQDKLRFLCGEMGDSLDYLEVFPAYLCFDLENRISPRFRFHKWLVEKG 511

Query: 338 AAKPNLSLSTILACSDARFVKYFVNVHTEGPSSKWDSFKKQ 365
            ++ + S+++I+A S+  F+     +H   P   ++ F  +
Sbjct: 512 FSEKSYSIASIVATSEKAFIARLYGIHPAIPKHWFERFSSR 551

[Close]

BLAST of MELO3C021796 vs. TAIR 10
Match: AT1G74120.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 60.5 bits (145), Expect = 3.4e-09
Identity = 64/260 (24.62%), Postives = 118/260 (45.38%), Query Frame = 0


Query: 100 LVKLGFKKDEVYSIFKQNPEILSEKSIKSIQKAVDFLLDIGLGREYI--LCIVTQNILLL 159
           L  LGF    V  I    P +L    I+ I++ ++FL+ IG+ R+ I     V   +L +
Sbjct: 154 LKSLGFCDSTVSRILSSFPGVLLVNEIE-IRRKIEFLVGIGIARDNIERFFHVFPEVLGI 213

Query: 160 GSCT-LKIPKTVFKELKVGKQGLCLIIRDDPSKLFTLASKLKPKTVE---QASCQYLEKT 219
           G+ T LK     F ++   K  +   I  +P  L     +L P+ +E      C+ + + 
Sbjct: 214 GTETRLKPLLDEFMKMGFSKDDVKKEIAREPRVLGLELGEL-PRCLELINTLKCREVIRV 273

Query: 220 TFLLKLGYHENSKEMAKALKQFRGRGDQLQERFDCLVKAGLDCIALKDIIRRAPMVLNQS 279
           + + +  +                 G +++ R DCL K GL       ++ + P V+   
Sbjct: 274 SIISEGAFR---------------AGFEVKLRVDCLCKYGLIRRDAFKVVWKEPRVILYE 333

Query: 280 KDVLQEKIVYLRNCLGYPLNTIMTFPAYLGYNKEK-ISARFSMYRWLRDKGAAKPNLSLS 339
            + +++KI +L N +G+ +N +   P YLG N +K I  R+++  +L+ KG    ++ L 
Sbjct: 334 IEDIEKKIEFLTNRMGFHINCLADVPEYLGVNLQKQIVPRYNVIDYLKLKGGLGCDIGLK 393

Query: 340 TILACSDARFVKYFVNVHTE 353
            ++  S  RF   +V  + E
Sbjct: 394 GLIKPSMKRFYNLYVMPYPE 396

The following BLAST results are available for this feature:

BLAST of MELO3C021796 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M219	5.1e-18	24.56	Transcription termination factor MTEF18, mitochondrial OS=Arabidopsis thaliana O...	[more]
Q9C6A1	4.7e-08	24.62	Transcription termination factor MTERF15, mitochondrial OS=Arabidopsis thaliana ...	[more]
Q9FK23	6.2e-08	26.34	Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4IHL3	1.7e-05	20.35	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of MELO3C021796 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK29366.1	6.7e-169	91.50	transcription termination factor MTEF18 [Cucumis melo var. makuwa]	[more]
XP_038893610.1	1.3e-164	81.18	transcription termination factor MTEF18, mitochondrial [Benincasa hispida]	[more]
XP_023000703.1	1.2e-154	76.82	transcription termination factor MTEF18, mitochondrial-like [Cucurbita maxima]	[more]
KAG7019433.1	3.6e-154	76.28	Transcription termination factor MTEF18, mitochondrial, partial [Cucurbita argyr...	[more]
KAG6583809.1	1.0e-153	76.01	Transcription termination factor MTEF18, mitochondrial, partial [Cucurbita argyr...	[more]

BLAST of MELO3C021796 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E0D7	3.3e-169	91.50	Transcription termination factor MTEF18 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A6J1KND2	6.0e-155	76.82	transcription termination factor MTEF18, mitochondrial-like OS=Cucurbita maxima ...	[more]
A0A6J1EHL0	1.2e-152	75.74	transcription termination factor MTEF18, mitochondrial-like OS=Cucurbita moschat...	[more]
A0A6J1CKT4	5.2e-151	73.92	transcription termination factor MTEF18, mitochondrial OS=Momordica charantia OX...	[more]
A0A2N9ISM1	4.0e-127	65.11	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55025 PE=3 SV=1	[more]

BLAST of MELO3C021796 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G19650.1	2.6e-102	52.20	Mitochondrial transcription termination factor family protein	[more]
AT5G45113.1	1.4e-84	42.42	mitochondrial transcription termination factor-related / mTERF-related	[more]
AT5G06810.1	6.5e-61	38.24	Mitochondrial transcription termination factor family protein	[more]
AT3G60400.1	3.6e-19	24.56	Mitochondrial transcription termination factor family protein	[more]
AT1G74120.1	3.4e-09	24.62	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 292..325 e-value: 410.0 score: 6.9 coord: 7..38 e-value: 2200.0 score: 1.3 coord: 260..291 e-value: 3.4 score: 16.7 coord: 111..142 e-value: 110.0 score: 11.4
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 61..211 e-value: 4.5E-13 score: 48.8 coord: 240..342 e-value: 3.1E-12 score: 46.1
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 3..361
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 94..364 e-value: 1.4E-50 score: 173.9
None	No IPR available	PANTHER	PTHR13068:SF103	MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN	coord: 3..361

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C021796.1	MELO3C021796.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding