MELO3C021606 (gene) Melon (DHL92) v4

Overview


Name	MELO3C021606
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	skin secretory protein xP2
Location	chr09: 4342879 .. 4343330 (+)
RNA-Seq Expression	MELO3C021606
Synteny	MELO3C021606

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCGTCAATTCATTCTCCTTGCCCTTCTCTTCTCCGCCGCCGTCATTGGCATTGTCTCTGCCGCCGAAGCCCCCGCCGCCTCCCCTGCCTCCTCCCCCGCCTCCTCCCCTAAGGCCGCTGACCTTGAACCCTCCGATGATGGAAAAACTCCCGCAGCTGCTCCTTCCAAGGCTCCTGCCGCCGCCGCTGACGCCCCGATCGCCGTCACTCCTTCCGCCGCAGGTGCTCCCAAAGGAGCTGCTTCAGCCCCTGCAGCTAAGGGTGGAGCCCCTGAAGCTGACAGCCCTGTTGCCGGTGGCCCTGCTTCTTCCCCTGCTGGCGATGAGTCTTCTTCCACTGTGGCCCCTGCTGGAGCCCCTGCTGGAGCCCCTGCATCCGATGCCGAAGTGTCATCTCCACCTTCCCCAACTGGACCGGCTGCCGGACCTGCAAGCGATGCCGCTGCTGA

mRNA sequence

ATGGCCCGTCAATTCATTCTCCTTGCCCTTCTCTTCTCCGCCGCCGTCATTGGCATTGTCTCTGCCGCCGAAGCCCCCGCCGCCTCCCCTGCCTCCTCCCCCGCCTCCTCCCCTAAGGCCGCTGACCTTGAACCCTCCGATGATGGAAAAACTCCCGCAGCTGCTCCTTCCAAGGCTCCTGCCGCCGCCGCTGACGCCCCGATCGCCGTCACTCCTTCCGCCGCAGGTGCTCCCAAAGGAGCTGCTTCAGCCCCTGCAGCTAAGGGTGGAGCCCCTGAAGCTGACAGCCCTGTTGCCGGTGGCCCTGCTTCTTCCCCTGCTGGCGATGAGTCTTCTTCCACTGTGGCCCCTGCTGGAGCCCCTGCTGGAGCCCCTGCATCCGATGCCGAAGTGTCATCTCCACCTTCCCCAACTGGACCGGCTGCCGGACCTGCAAGCGATGCCGCTGCTGA

Coding sequence (CDS)

ATGGCCCGTCAATTCATTCTCCTTGCCCTTCTCTTCTCCGCCGCCGTCATTGGCATTGTCTCTGCCGCCGAAGCCCCCGCCGCCTCCCCTGCCTCCTCCCCCGCCTCCTCCCCTAAGGCCGCTGACCTTGAACCCTCCGATGATGGAAAAACTCCCGCAGCTGCTCCTTCCAAGGCTCCTGCCGCCGCCGCTGACGCCCCGATCGCCGTCACTCCTTCCGCCGCAGGTGCTCCCAAAGGAGCTGCTTCAGCCCCTGCAGCTAAGGGTGGAGCCCCTGAAGCTGACAGCCCTGTTGCCGGTGGCCCTGCTTCTTCCCCTGCTGGCGATGAGTCTTCTTCCACTGTGGCCCCTGCTGGAGCCCCTGCTGGAGCCCCTGCATCCGATGCCGAAGTGTCATCTCCACCTTCCCCAACTGGACCGGCTGCCGGACCTGCAAGCGATGCCGCTGCT

Protein sequence

MARQFILLALLFSAAVIGIVSAAEAPAASPASSPASSPKAADLEPSDDGKTPAAAPSKAPAAAADAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGPAAGPASDAAA

Homology

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BLAST of MELO3C021606 vs. NCBI nr
Match: XP_008458926.1 (PREDICTED: skin secretory protein xP2 [Cucumis melo])

HSP 1 Score: 232.3 bits (591), Expect = 2.8e-57
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MARQFILLALLFSAAVIGIVSAAEAPAASPASSPASSPKAADLEPSDDGKTPAAAPSKAP 60
           MARQFILLALLFSAAVIGIVSAAEAPAASPASSPASSPKAADLEPSDDGKTPAAAPSKAP
Sbjct: 1   MARQFILLALLFSAAVIGIVSAAEAPAASPASSPASSPKAADLEPSDDGKTPAAAPSKAP 60

Query: 61  AAAADAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVAPAGA 120
           AAAADAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVAPAGA
Sbjct: 61  AAAADAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVAPAGA 120

Query: 121 PAGAPASDAEVSSPPSPTGPAAGPASDAAA 151
           PAGAPASDAEVSSPPSPTGPAAGPASDAAA
Sbjct: 121 PAGAPASDAEVSSPPSPTGPAAGPASDAAA 150

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BLAST of MELO3C021606 vs. NCBI nr
Match: XP_031741751.1 (lysine-rich arabinogalactan protein 17 [Cucumis sativus])

HSP 1 Score: 189.1 bits (479), Expect = 2.7e-44
Identity = 129/154 (83.77%), Postives = 137/154 (88.96%), Query Frame = 0


Query: 1   MARQFILLALLFSAAVIGIVSAAEA----PAASPASSPASSPKAADLEPSDDGKTPAAAP 60
           MARQF LLALLFSAAV+GIVSAAEA    PA+SPASSPASSPKAAD+EPSD  KTPAAAP
Sbjct: 1   MARQFALLALLFSAAVVGIVSAAEAPATSPASSPASSPASSPKAADVEPSDGAKTPAAAP 60

Query: 61  SKAPAAAADAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVA 120
           SK+PAAAADAPIA TPSAAGAPKGAASAP+AK GAPEAD+PVAGGPASSPAGDESSSTVA
Sbjct: 61  SKSPAAAADAPIAATPSAAGAPKGAASAPSAKAGAPEADTPVAGGPASSPAGDESSSTVA 120

Query: 121 PAGAPAGAPASDAEVSSPPSPTGPAAGPASDAAA 151
           PAGAP      +A+VSSPPSPTGPAAGP SDA A
Sbjct: 121 PAGAP------EADVSSPPSPTGPAAGPTSDAVA 148

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BLAST of MELO3C021606 vs. NCBI nr
Match: TYK09358.1 (skin secretory protein xP2 [Cucumis melo var. makuwa])

HSP 1 Score: 172.6 bits (436), Expect = 2.7e-39
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 39  KAADLEPSDDGKTPAAAPSKAPAAAADAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPV 98
           +AADLEPSDDGKTPAAAPSKAPAAA DAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPV
Sbjct: 3   QAADLEPSDDGKTPAAAPSKAPAAAVDAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPV 62

Query: 99  AGGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGPAAGPASDAAA 151
           AGGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGPAAGPASDAAA
Sbjct: 63  AGGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGPAAGPASDAAA 114

[Close]

BLAST of MELO3C021606 vs. NCBI nr
Match: XP_038889219.1 (classical arabinogalactan protein 11 [Benincasa hispida])

HSP 1 Score: 132.1 bits (331), Expect = 4.0e-27
Identity = 105/150 (70.00%), Postives = 116/150 (77.33%), Query Frame = 0


Query: 1   MARQFILLALLFSAAVIGIVSAAEAPAASPASSPASSPKAADLEPSDDGKTPAAAPSKAP 60
           MARQ +LLALLF+ AV+GIVSAAEAP ASPASSPA+   A     SD  KTPAAAPSK+P
Sbjct: 1   MARQLVLLALLFT-AVVGIVSAAEAPTASPASSPAADDHAV----SDAEKTPAAAPSKSP 60

Query: 61  AAAADAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVAPAGA 120
           AAA  APIA TPSAAGAP+GAAS+P A     EA+SP AGGPAS PAGDESSS      +
Sbjct: 61  AAATTAPIAATPSAAGAPEGAASSPQA-----EAESPAAGGPASGPAGDESSS-----DS 120

Query: 121 PAGAPASDAEVSSPPSPTGPAAGPASDAAA 151
           PAGAP SDA+VSSPPSPTGPAAGPA   A+
Sbjct: 121 PAGAPESDADVSSPPSPTGPAAGPADGPAS 135

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BLAST of MELO3C021606 vs. NCBI nr
Match: KAA0037616.1 (skin secretory protein xP2 [Cucumis melo var. makuwa])

HSP 1 Score: 110.2 bits (274), Expect = 1.6e-20
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0


Query: 81  AASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGP 140
           AASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGP
Sbjct: 4   AASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGP 63

Query: 141 AAGPASDAAA 151
           AAGPASDAAA
Sbjct: 64  AAGPASDAAA 73

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BLAST of MELO3C021606 vs. ExPASy TrEMBL
Match: A0A1S3CA92 (skin secretory protein xP2 OS=Cucumis melo OX=3656 GN=LOC103498187 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.4e-57
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MARQFILLALLFSAAVIGIVSAAEAPAASPASSPASSPKAADLEPSDDGKTPAAAPSKAP 60
           MARQFILLALLFSAAVIGIVSAAEAPAASPASSPASSPKAADLEPSDDGKTPAAAPSKAP
Sbjct: 1   MARQFILLALLFSAAVIGIVSAAEAPAASPASSPASSPKAADLEPSDDGKTPAAAPSKAP 60

Query: 61  AAAADAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVAPAGA 120
           AAAADAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVAPAGA
Sbjct: 61  AAAADAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVAPAGA 120

Query: 121 PAGAPASDAEVSSPPSPTGPAAGPASDAAA 151
           PAGAPASDAEVSSPPSPTGPAAGPASDAAA
Sbjct: 121 PAGAPASDAEVSSPPSPTGPAAGPASDAAA 150

[Close]

BLAST of MELO3C021606 vs. ExPASy TrEMBL
Match: A0A5D3CDS4 (Skin secretory protein xP2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold249G00550 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.3e-39
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 39  KAADLEPSDDGKTPAAAPSKAPAAAADAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPV 98
           +AADLEPSDDGKTPAAAPSKAPAAA DAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPV
Sbjct: 3   QAADLEPSDDGKTPAAAPSKAPAAAVDAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPV 62

Query: 99  AGGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGPAAGPASDAAA 151
           AGGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGPAAGPASDAAA
Sbjct: 63  AGGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGPAAGPASDAAA 114

[Close]

BLAST of MELO3C021606 vs. ExPASy TrEMBL
Match: A0A0A0KUB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517830 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 3.3e-35
Identity = 105/124 (84.68%), Postives = 112/124 (90.32%), Query Frame = 0


Query: 27  AASPASSPASSPKAADLEPSDDGKTPAAAPSKAPAAAADAPIAVTPSAAGAPKGAASAPA 86
           A+SPASSPASSPKAAD+EPSD  KTPAAAPSK+PAAAADAPIA TPSAAGAPKGAASAP+
Sbjct: 84  ASSPASSPASSPKAADVEPSDGAKTPAAAPSKSPAAAADAPIAATPSAAGAPKGAASAPS 143

Query: 87  AKGGAPEADSPVAGGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGPAAGPAS 146
           AK GAPEAD+PVAGGPASSPAGDESSSTVAPAGAP      +A+VSSPPSPTGPAAGP S
Sbjct: 144 AKAGAPEADTPVAGGPASSPAGDESSSTVAPAGAP------EADVSSPPSPTGPAAGPTS 201

Query: 147 DAAA 151
           DA A
Sbjct: 204 DAVA 201

[Close]

BLAST of MELO3C021606 vs. ExPASy TrEMBL
Match: A0A5A7T636 (Skin secretory protein xP2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002770 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 7.8e-21
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0


Query: 81  AASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGP 140
           AASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGP
Sbjct: 4   AASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGP 63

Query: 141 AAGPASDAAA 151
           AAGPASDAAA
Sbjct: 64  AAGPASDAAA 73

[Close]

BLAST of MELO3C021606 vs. ExPASy TrEMBL
Match: A0A6J1BWF7 (brain acid soluble protein 1 OS=Momordica charantia OX=3673 GN=LOC111006138 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 4.8e-10
Identity = 81/160 (50.62%), Postives = 107/160 (66.88%), Query Frame = 0


Query: 1   MARQFILLALLFSAAVIGIVSAAEAPAASPASSPASSPKAADLEPSDDGKTPAAAPSKAP 60
           MARQ ++LALLF AAV+G+VSAA+AP+ +PA++P+ S  + + + S   K+PA+AP+ AP
Sbjct: 1   MARQLVVLALLF-AAVVGVVSAAKAPSTAPAAAPSKS-NSTEAKDSPASKSPASAPAAAP 60

Query: 61  ----------AAAADAPIAVTPSAAGAPKGAASAPAAKG-GAPEADSPVAGGPASSPAGD 120
                     AA +DAP + TP AA APKGAAS+PAA      +A+S  AG PASSPA D
Sbjct: 61  SKSNSSSAPAAAESDAPSSATP-AADAPKGAASSPAADAPKGTKAESAPAGSPASSPAAD 120

Query: 121 ESSSTVAPAGAPAGAPASDAEVSSPPSPTGPAAGPASDAA 150
             +S  +PA +P       A+VSSPPSP+GPAA   SDAA
Sbjct: 121 GPASDESPAASP-----DAADVSSPPSPSGPAAD--SDAA 150

The following BLAST results are available for this feature:

BLAST of MELO3C021606 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458926.1	2.8e-57	100.00	PREDICTED: skin secretory protein xP2 [Cucumis melo]	[more]
XP_031741751.1	2.7e-44	83.77	lysine-rich arabinogalactan protein 17 [Cucumis sativus]	[more]
TYK09358.1	2.7e-39	98.21	skin secretory protein xP2 [Cucumis melo var. makuwa]	[more]
XP_038889219.1	4.0e-27	70.00	classical arabinogalactan protein 11 [Benincasa hispida]	[more]
KAA0037616.1	1.6e-20	100.00	skin secretory protein xP2 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C021606 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C021606 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CA92	1.4e-57	100.00	skin secretory protein xP2 OS=Cucumis melo OX=3656 GN=LOC103498187 PE=4 SV=1	[more]
A0A5D3CDS4	1.3e-39	98.21	Skin secretory protein xP2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A0A0KUB8	3.3e-35	84.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517830 PE=4 SV=1	[more]
A0A5A7T636	7.8e-21	100.00	Skin secretory protein xP2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A6J1BWF7	4.8e-10	50.63	brain acid soluble protein 1 OS=Momordica charantia OX=3673 GN=LOC111006138 PE=4...	[more]

BLAST of MELO3C021606 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C021606.1	MELO3C021606.1	mRNA