MELO3C021097 (gene) Melon (DHL92) v4

Overview
NameMELO3C021097
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr01: 26200312 .. 26200515 (+)
RNA-Seq ExpressionMELO3C021097
SyntenyMELO3C021097
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTCATGAGGCTAACTTACTGATTGATAGGGTGGTTGGAATATATGGAAGCTTCTCGCCGGAGGATGCCCAACGTATTCATAGAAAACCAGAGAGCTCGAATCTGAACCCGATTGATGTTTGGCACATGGAGAAGCATGGAGCTTGCTTAGTCCGATTATCGATGTTATTGACATTGAGTCCGAGGAGAATGAAGCAATGA

mRNA sequence

ATGAGTCATGAGGCTAACTTACTGATTGATAGGGTGGTTGGAATATATGGAAGCTTCTCGCCGGAGGATGCCCAACGTATTCATAGAAAACCAGAGAGCTCGAATCTGAACCCGATTGATGTTTGGCACATGGAGAAGCATGGAGCTTGCTTAGTCCGATTATCGATGTTATTGACATTGAGTCCGAGGAGAATGAAGCAATGA

Coding sequence (CDS)

ATGAGTCATGAGGCTAACTTACTGATTGATAGGGTGGTTGGAATATATGGAAGCTTCTCGCCGGAGGATGCCCAACGTATTCATAGAAAACCAGAGAGCTCGAATCTGAACCCGATTGATGTTTGGCACATGGAGAAGCATGGAGCTTGCTTAGTCCGATTATCGATGTTATTGACATTGAGTCCGAGGAGAATGAAGCAATGA

Protein sequence

MSHEANLLIDRVVGIYGSFSPEDAQRIHRKPESSNLNPIDVWHMEKHGACLVRLSMLLTLSPRRMKQ
Homology
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BLAST of MELO3C021097 vs. NCBI nr
Match: XP_031741396.1 (general transcription factor IIF subunit 2 isoform X2 [Cucumis sativus])

HSP 1 Score: 57.8 bits (138), Expect = 4.3e-05
Identity = 24/48 (50.00%), Postives = 34/48 (70.83%), Query Frame = 0 

Query: 4   EANLLIDRVVGIYGSFSPEDAQRIHRKPESSNLNPIDVWHMEKHGACL 52
           + NLLID+V GI+GSFSPE A++  + P   + NPID+W +EK  + L
Sbjct: 91  DPNLLIDKVAGIHGSFSPEQAEKFFKGPGGPDPNPIDIWRVEKSNSRL 138

The following BLAST results are available for this feature:
BLAST of MELO3C021097 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031741396.14.3e-0550.00general transcription factor IIF subunit 2 isoform X2 [Cucumis sativus][more]
BLAST of MELO3C021097 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C021097 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C021097 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C021097.1MELO3C021097.1mRNA