MELO3C021076.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C021076.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionHexosyltransferase
Locationchr01: 25987499 .. 25987783 (+)
RNA-Seq ExpressionMELO3C021076.jh1
SyntenyMELO3C021076.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTGGGTTACAAATAAAACCGGGTCGAAGCATAGCGAGAGCCGAGCGTATTCATCAGGCGCGCGGGTCGGAACCAAAAATTGAATCGAATCCAGGTAGGCGTGCGAGGCATCCGAACTGTTTAAGGGTCACGTGTCGCGCAAGTAAGGAGAACACGTGGCGGGCGTCGGGCATATGCGAGGAACCGGGTCACGAACCGGTTTCTAGGTTGGTTTTGGGTCGACAATTCGAGTCTGATCATCTGATTCGGGTGTGTGAGCCATTTTTCTCCGATAAAAGTTGA

mRNA sequence

ATGCGTGGGTTACAAATAAAACCGGGTCGAAGCATAGCGAGAGCCGAGCGTATTCATCAGGCGCGCGGGTCGGAACCAAAAATTGAATCGAATCCAGGTAGGCGTGCGAGGCATCCGAACTGTTTAAGGGTCACGTGTCGCGCAAGTAAGGAGAACACGTGGCGGGCGTCGGGCATATGCGAGGAACCGGGTCACGAACCGGTTTCTAGGTTGGTTTTGGGTCGACAATTCGAGTCTGATCATCTGATTCGGGTGTGTGAGCCATTTTTCTCCGATAAAAGTTGA

Coding sequence (CDS)

ATGCGTGGGTTACAAATAAAACCGGGTCGAAGCATAGCGAGAGCCGAGCGTATTCATCAGGCGCGCGGGTCGGAACCAAAAATTGAATCGAATCCAGGTAGGCGTGCGAGGCATCCGAACTGTTTAAGGGTCACGTGTCGCGCAAGTAAGGAGAACACGTGGCGGGCGTCGGGCATATGCGAGGAACCGGGTCACGAACCGGTTTCTAGGTTGGTTTTGGGTCGACAATTCGAGTCTGATCATCTGATTCGGGTGTGTGAGCCATTTTTCTCCGATAAAAGTTGA

Protein sequence

MRGLQIKPGRSIARAERIHQARGSEPKIESNPGRRARHPNCLRVTCRASKENTWRASGICEEPGHEPVSRLVLGRQFESDHLIRVCEPFFSDKS
Homology
[Close]
BLAST of MELO3C021076.jh1 vs. NCBI nr
Match: KAA0026145.1 (galacturonosyltransferase 8 [Cucumis melo var. makuwa] >TYK11605.1 galacturonosyltransferase 8 [Cucumis melo var. makuwa])

HSP 1 Score: 172 bits (435), Expect = 2.31e-48
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0 

Query: 1  MRGLQIKPGRSIARAERIHQARGSEPKIESNPGRRARHPNCLRVTCRASKENTWRASGIC 60
          MRGLQIKPGRSIARAERIHQARGSEP+IESNPGRRARHPNCLR TCRASKENTWRASGIC
Sbjct: 1  MRGLQIKPGRSIARAERIHQARGSEPRIESNPGRRARHPNCLRFTCRASKENTWRASGIC 60

Query: 61 EEPGHEPVSRLVLGRQFESDHLIR 84
          EEPGHEPVSRLVLGRQFESDHLIR
Sbjct: 61 EEPGHEPVSRLVLGRQFESDHLIR 84

[Close]
BLAST of MELO3C021076.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SNZ0 (Hexosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold263G00500 PE=3 SV=1)

HSP 1 Score: 172 bits (435), Expect = 1.12e-48
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0 

Query: 1  MRGLQIKPGRSIARAERIHQARGSEPKIESNPGRRARHPNCLRVTCRASKENTWRASGIC 60
          MRGLQIKPGRSIARAERIHQARGSEP+IESNPGRRARHPNCLR TCRASKENTWRASGIC
Sbjct: 1  MRGLQIKPGRSIARAERIHQARGSEPRIESNPGRRARHPNCLRFTCRASKENTWRASGIC 60

Query: 61 EEPGHEPVSRLVLGRQFESDHLIR 84
          EEPGHEPVSRLVLGRQFESDHLIR
Sbjct: 61 EEPGHEPVSRLVLGRQFESDHLIR 84

The following BLAST results are available for this feature:
BLAST of MELO3C021076.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0026145.12.31e-4897.62galacturonosyltransferase 8 [Cucumis melo var. makuwa] >TYK11605.1 galacturonosy... [more]
BLAST of MELO3C021076.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C021076.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SNZ01.12e-4897.62Hexosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold263G0... [more]
BLAST of MELO3C021076.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..36

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C021076.jh1.t1MELO3C021076.jh1.t1mRNA