Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTGGGTTACAAATAAAACCGGGTCGAAGCATAGCGAGAGCCGAGCGTATTCATCAGGCGCGCGGGTCGGAACCAAAAATTGAATCGAATCCAGGTAGGCGTGCGAGGCATCCGAACTGTTTAAGGGTCACGTGTCGCGCAAGTAAGGAGAACACGTGGCGGGCGTCGGGCATATGCGAGGAACCGGGTCACGAACCGGTTTCTAGGTTGGTTTTGGGTCGACAATTCGAGTCTGATCATCTGATTCGGGTGTGTGAGCCATTTTTCTCCGATAAAAGTTGA mRNA sequence
ATGCGTGGGTTACAAATAAAACCGGGTCGAAGCATAGCGAGAGCCGAGCGTATTCATCAGGCGCGCGGGTCGGAACCAAAAATTGAATCGAATCCAGGTAGGCGTGCGAGGCATCCGAACTGTTTAAGGGTCACGTGTCGCGCAAGTAAGGAGAACACGTGGCGGGCGTCGGGCATATGCGAGGAACCGGGTCACGAACCGGTTTCTAGGTTGGTTTTGGGTCGACAATTCGAGTCTGATCATCTGATTCGGGTGTGTGAGCCATTTTTCTCCGATAAAAGTTGA Coding sequence (CDS)
ATGCGTGGGTTACAAATAAAACCGGGTCGAAGCATAGCGAGAGCCGAGCGTATTCATCAGGCGCGCGGGTCGGAACCAAAAATTGAATCGAATCCAGGTAGGCGTGCGAGGCATCCGAACTGTTTAAGGGTCACGTGTCGCGCAAGTAAGGAGAACACGTGGCGGGCGTCGGGCATATGCGAGGAACCGGGTCACGAACCGGTTTCTAGGTTGGTTTTGGGTCGACAATTCGAGTCTGATCATCTGATTCGGGTGTGTGAGCCATTTTTCTCCGATAAAAGTTGA Protein sequence
MRGLQIKPGRSIARAERIHQARGSEPKIESNPGRRARHPNCLRVTCRASKENTWRASGICEEPGHEPVSRLVLGRQFESDHLIRVCEPFFSDKS
Homology
BLAST of MELO3C021076 vs. NCBI nr
Match:
KAA0026145.1 (galacturonosyltransferase 8 [Cucumis melo var. makuwa] >TYK11605.1 galacturonosyltransferase 8 [Cucumis melo var. makuwa])
HSP 1 Score: 172.9 bits (437), Expect = 1.3e-39
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0
Query: 1 MRGLQIKPGRSIARAERIHQARGSEPKIESNPGRRARHPNCLRVTCRASKENTWRASGIC 60 MRGLQIKPGRSIARAERIHQARGSEP+IESNPGRRARHPNCLR TCRASKENTWRASGIC Sbjct: 1 MRGLQIKPGRSIARAERIHQARGSEPRIESNPGRRARHPNCLRFTCRASKENTWRASGIC 60 Query: 61 EEPGHEPVSRLVLGRQFESDHLIR 85 EEPGHEPVSRLVLGRQFESDHLIR Sbjct: 61 EEPGHEPVSRLVLGRQFESDHLIR 84
BLAST of MELO3C021076 vs. ExPASy TrEMBL
Match:
A0A5A7SNZ0 (Hexosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold263G00500 PE=3 SV=1)
HSP 1 Score: 172.9 bits (437), Expect = 6.2e-40
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0
Query: 1 MRGLQIKPGRSIARAERIHQARGSEPKIESNPGRRARHPNCLRVTCRASKENTWRASGIC 60 MRGLQIKPGRSIARAERIHQARGSEP+IESNPGRRARHPNCLR TCRASKENTWRASGIC Sbjct: 1 MRGLQIKPGRSIARAERIHQARGSEPRIESNPGRRARHPNCLRFTCRASKENTWRASGIC 60 Query: 61 EEPGHEPVSRLVLGRQFESDHLIR 85 EEPGHEPVSRLVLGRQFESDHLIR Sbjct: 61 EEPGHEPVSRLVLGRQFESDHLIR 84
The following BLAST results are available for this feature:
Match Name E-value Identity Description
KAA0026145.1 1.3e-39 97.62 galacturonosyltransferase 8 [Cucumis melo var. makuwa] >TYK11605.1 galacturonosy... [more]
Match Name E-value Identity Description
Match Name E-value Identity Description
A0A5A7SNZ0 6.2e-40 97.62 Hexosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold263G0... [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
A T G C G T G G G T T A C A A A T A A A A C C G G G T C G A A G C A T A G C G A G A G C C G A G C G T A T T C A T C A G G C G C G C G G G T C G G A A C C A A A A A T T G A A T C G A A T C C A G G T A G G C G T G C G A G G C A T C C G A A C T G T T T A A G G G T C A C G T G T C G C G C A A G T A A G G A G A A C A C G T G G C G G G C G T C G G G C A T A T G C G A G G A A C C G G G T C A C G A A C C G G T T T C T A G G T T G G T T T T G G G T C G A C A A T T C G A G T C T G A T C A T C T G A T T C G G G T G T G T G A G C C A T T T T T C T C C G A T A A A A G T T G A 20 40 60 80 100 120 140 160 180 200 220 240 260 280 Score = Score = Sequence mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..36
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 12..36
Relationships
The following mRNA feature(s) are a part of this gene: