MELO3C021063 (gene) Melon (DHL92) v4

Overview
NameMELO3C021063
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Descriptionmacrophage erythroblast attacher
Locationchr01: 25549876 .. 25550128 (-)
RNA-Seq ExpressionMELO3C021063
SyntenyMELO3C021063
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACACCAAGAACCCACCTCAAGTCCTTCCAAATGGTTATGTGTATAGTGCCAAGGTTAGCATCTTTTCATTTGTATGAACTGATTAGAAGATTTATAACAAAGTTCATTTCAAAATGTTGAGTTTGTGTTTGACATTGACGCTTGGCAGGCTCTAGAAAGAATGTCCAAGGAAACAGTGGTAAAATCACTTGCCCAAGAACAGGCTTTGTGTGCAACTATTCAGAGCTGGTGAAGGCATACATATCATAG

mRNA sequence

ATGGACACCAAGAACCCACCTCAAGTCCTTCCAAATGGTTATGTGTATAGTGCCAAGAAAGAATGTCCAAGGAAACAGTGGTAAAATCACTTGCCCAAGAACAGGCTTTGTGTGCAACTATTCAGAGCTGGTGAAGGCATACATATCATAG

Coding sequence (CDS)

ATGGTTATGTGTATAGTGCCAAGAAAGAATGTCCAAGGAAACAGTGGTAAAATCACTTGCCCAAGAACAGGCTTTGTGTGCAACTATTCAGAGCTGGTGAAGGCATACATATCATAG

Protein sequence

MVMCIVPRKNVQGNSGKITCPRTGFVCNYSELVKAYIS
Homology
BLAST of MELO3C021063 vs. NCBI nr
Match: XP_022139154.1 (macrophage erythroblast attacher [Momordica charantia])

HSP 1 Score: 57.4 bits (137), Expect = 3.1e-05
Identity = 25/30 (83.33%), Postives = 26/30 (86.67%), Query Frame = 0

Query: 9   KNVQGNSGKITCPRTGFVCNYSELVKAYIS 39
           K  + NSGKITCPRTGF CNYSELVKAYIS
Sbjct: 384 KMAKENSGKITCPRTGFACNYSELVKAYIS 413

BLAST of MELO3C021063 vs. NCBI nr
Match: XP_038893185.1 (protein MAEA homolog [Benincasa hispida])

HSP 1 Score: 57.4 bits (137), Expect = 3.1e-05
Identity = 25/25 (100.00%), Postives = 25/25 (100.00%), Query Frame = 0

Query: 14  NSGKITCPRTGFVCNYSELVKAYIS 39
           NSGKITCPRTGFVCNYSELVKAYIS
Sbjct: 389 NSGKITCPRTGFVCNYSELVKAYIS 413

BLAST of MELO3C021063 vs. NCBI nr
Match: KAG7031836.1 (Macrophage erythroblast attacher, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 57.0 bits (136), Expect = 4.1e-05
Identity = 25/30 (83.33%), Postives = 27/30 (90.00%), Query Frame = 0

Query: 9   KNVQGNSGKITCPRTGFVCNYSELVKAYIS 39
           K  + NSGKITCPRTGFVC+YSELVKAYIS
Sbjct: 384 KMAKENSGKITCPRTGFVCSYSELVKAYIS 413

BLAST of MELO3C021063 vs. NCBI nr
Match: XP_022987315.1 (protein MAEA homolog [Cucurbita maxima])

HSP 1 Score: 57.0 bits (136), Expect = 4.1e-05
Identity = 25/30 (83.33%), Postives = 27/30 (90.00%), Query Frame = 0

Query: 9   KNVQGNSGKITCPRTGFVCNYSELVKAYIS 39
           K  + NSGKITCPRTGFVC+YSELVKAYIS
Sbjct: 384 KMAKENSGKITCPRTGFVCSYSELVKAYIS 413

BLAST of MELO3C021063 vs. NCBI nr
Match: XP_023549327.1 (protein MAEA homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 57.0 bits (136), Expect = 4.1e-05
Identity = 25/30 (83.33%), Postives = 27/30 (90.00%), Query Frame = 0

Query: 9   KNVQGNSGKITCPRTGFVCNYSELVKAYIS 39
           K  + NSGKITCPRTGFVC+YSELVKAYIS
Sbjct: 384 KMAKENSGKITCPRTGFVCSYSELVKAYIS 413

BLAST of MELO3C021063 vs. ExPASy Swiss-Prot
Match: Q9M2V9 (Protein MAEA homolog OS=Arabidopsis thaliana OX=3702 GN=MAEA PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 6.0e-07
Identity = 22/31 (70.97%), Postives = 26/31 (83.87%), Query Frame = 0

Query: 8   RKNVQGNSGKITCPRTGFVCNYSELVKAYIS 39
           ++  + N GKITCPRTG VCNY+ELVKAYIS
Sbjct: 388 KEMAEKNGGKITCPRTGLVCNYTELVKAYIS 418

BLAST of MELO3C021063 vs. ExPASy TrEMBL
Match: A0A6J1CC47 (macrophage erythroblast attacher OS=Momordica charantia OX=3673 GN=LOC111010128 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.5e-05
Identity = 25/30 (83.33%), Postives = 26/30 (86.67%), Query Frame = 0

Query: 9   KNVQGNSGKITCPRTGFVCNYSELVKAYIS 39
           K  + NSGKITCPRTGF CNYSELVKAYIS
Sbjct: 384 KMAKENSGKITCPRTGFACNYSELVKAYIS 413

BLAST of MELO3C021063 vs. ExPASy TrEMBL
Match: A0A6J1JGH6 (protein MAEA homolog OS=Cucurbita maxima OX=3661 GN=LOC111484900 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.0e-05
Identity = 25/30 (83.33%), Postives = 27/30 (90.00%), Query Frame = 0

Query: 9   KNVQGNSGKITCPRTGFVCNYSELVKAYIS 39
           K  + NSGKITCPRTGFVC+YSELVKAYIS
Sbjct: 384 KMAKENSGKITCPRTGFVCSYSELVKAYIS 413

BLAST of MELO3C021063 vs. ExPASy TrEMBL
Match: A0A6J1GYS9 (protein MAEA homolog OS=Cucurbita moschata OX=3662 GN=LOC111458394 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.0e-05
Identity = 25/30 (83.33%), Postives = 27/30 (90.00%), Query Frame = 0

Query: 9   KNVQGNSGKITCPRTGFVCNYSELVKAYIS 39
           K  + NSGKITCPRTGFVC+YSELVKAYIS
Sbjct: 384 KMAKENSGKITCPRTGFVCSYSELVKAYIS 413

BLAST of MELO3C021063 vs. ExPASy TrEMBL
Match: A0A5A7SXV8 (Macrophage erythroblast attacher OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00090 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.4e-05
Identity = 24/25 (96.00%), Postives = 25/25 (100.00%), Query Frame = 0

Query: 14  NSGKITCPRTGFVCNYSELVKAYIS 39
           NSGKITCPRTGFVCNYSEL+KAYIS
Sbjct: 391 NSGKITCPRTGFVCNYSELMKAYIS 415

BLAST of MELO3C021063 vs. ExPASy TrEMBL
Match: A0A1S3BD27 (macrophage erythroblast attacher OS=Cucumis melo OX=3656 GN=LOC103488726 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.4e-05
Identity = 24/25 (96.00%), Postives = 25/25 (100.00%), Query Frame = 0

Query: 14  NSGKITCPRTGFVCNYSELVKAYIS 39
           NSGKITCPRTGFVCNYSEL+KAYIS
Sbjct: 391 NSGKITCPRTGFVCNYSELMKAYIS 415

BLAST of MELO3C021063 vs. TAIR 10
Match: AT3G55070.1 (LisH/CRA/RING-U-box domains-containing protein )

HSP 1 Score: 53.5 bits (127), Expect = 4.2e-08
Identity = 22/31 (70.97%), Postives = 26/31 (83.87%), Query Frame = 0

Query: 8   RKNVQGNSGKITCPRTGFVCNYSELVKAYIS 39
           ++  + N GKITCPRTG VCNY+ELVKAYIS
Sbjct: 388 KEMAEKNGGKITCPRTGLVCNYTELVKAYIS 418

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022139154.13.1e-0583.33macrophage erythroblast attacher [Momordica charantia][more]
XP_038893185.13.1e-05100.00protein MAEA homolog [Benincasa hispida][more]
KAG7031836.14.1e-0583.33Macrophage erythroblast attacher, partial [Cucurbita argyrosperma subsp. argyros... [more]
XP_022987315.14.1e-0583.33protein MAEA homolog [Cucurbita maxima][more]
XP_023549327.14.1e-0583.33protein MAEA homolog [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q9M2V96.0e-0770.97Protein MAEA homolog OS=Arabidopsis thaliana OX=3702 GN=MAEA PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1CC471.5e-0583.33macrophage erythroblast attacher OS=Momordica charantia OX=3673 GN=LOC111010128 ... [more]
A0A6J1JGH62.0e-0583.33protein MAEA homolog OS=Cucurbita maxima OX=3661 GN=LOC111484900 PE=4 SV=1[more]
A0A6J1GYS92.0e-0583.33protein MAEA homolog OS=Cucurbita moschata OX=3662 GN=LOC111458394 PE=4 SV=1[more]
A0A5A7SXV83.4e-0596.00Macrophage erythroblast attacher OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... [more]
A0A1S3BD273.4e-0596.00macrophage erythroblast attacher OS=Cucumis melo OX=3656 GN=LOC103488726 PE=4 SV... [more]
Match NameE-valueIdentityDescription
AT3G55070.14.2e-0870.97LisH/CRA/RING-U-box domains-containing protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C021063.1MELO3C021063.1mRNA