MELO3C021041 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTTCAGTCCGGGCTGATCGAATTCCAAGGACGCCATCCGTTCCGCTACATCCTGTGAAATATTACATTCATGTGTTAAACGGCCTAAGCAACCTCGACTTGGGTGTGCACTGCCAGTCCAAAGACAATGATTTGGGATATCAACATTTGATTAATCGTGGAGATGATTTTCAATGGAACTTTAAGGAAAATATTTGGGGAACAACCTTGTTTTGGTGCAAATTGGTGAAACGAGATGCCTATGTCTCTTTCGAAATCTTTTGGCCAGAGTCTAAAAACTTTTGGCTACGAGATAGATGTGGGAGTGAAGGAAATTGTATTTGGACCGCCAAGGATGATGGAATTTATTTGAGAAATAATCCTACTAATGTTGATGAATATGTTCACAACTGGATCCCTTACTAG CTTCAGTCCGGGCTGATCGAATTCCAAGGACGCCATCCGTTCCGCTACATCCTGTGAAATATTACATTCATGTGTTAAACGGCCTAAGCAACCTCGACTTGGGTGTGCACTGCCAGTCCAAAGACAATGATTTGGGATATCAACATTTGATTAATCGTGGAGATGATTTTCAATGGAACTTTAAGGAAAATATTTGGGGAACAACCTTGTTTTGGTGCAAATTGGTGAAACGAGATGCCTATGTCTCTTTCGAAATCTTTTGGCCAGAGTCTAAAAACTTTTGGCTACGAGATAGATGTGGGAGTGAAGGAAATTGTATTTGGACCGCCAAGGATGATGGAATTTATTTGAGAAATAATCCTACTAATGTTGATGAATATGTTCACAACTGGATCCCTTACTAG TCAGTCCGGGCTGATCGAATTCCAAGGACGCCATCCGTTCCGCTACATCCTGTGAAATATTACATTCATGTGTTAAACGGCCTAAGCAACCTCGACTTGGGTGTGCACTGCCAGTCCAAAGACAATGATTTGGGATATCAACATTTGATTAATCGTGGAGATGATTTTCAATGGAACTTTAAGGAAAATATTTGGGGAACAACCTTGTTTTGGTGCAAATTGGTGAAACGAGATGCCTATGTCTCTTTCGAAATCTTTTGGCCAGAGTCTAAAAACTTTTGGCTACGAGATAGATGTGGGAGTGAAGGAAATTGTATTTGGACCGCCAAGGATGATGGAATTTATTTGAGAAATAATCCTACTAATGTTGATGAATATGTTCACAACTGGATCCCTTACTAG SVRADRIPRTPSVPLHPVKYYIHVLNGLSNLDLGVHCQSKDNDLGYQHLINRGDDFQWNFKENIWGTTLFWCKLVKRDAYVSFEIFWPESKNFWLRDRCGSEGNCIWTAKDDGIYLRNNPTNVDEYVHNWIPY Homology
BLAST of MELO3C021041 vs. NCBI nr
Match: XP_004139726.1 (S-protein homolog 74-like [Cucumis sativus]) HSP 1 Score: 265.0 bits (676), Expect = 3.5e-67 Identity = 112/131 (85.50%), Postives = 122/131 (93.13%), Query Frame = 0
BLAST of MELO3C021041 vs. NCBI nr
Match: XP_038896424.1 (S-protein homolog 74-like [Benincasa hispida]) HSP 1 Score: 232.3 bits (591), Expect = 2.5e-57 Identity = 101/131 (77.10%), Postives = 111/131 (84.73%), Query Frame = 0
BLAST of MELO3C021041 vs. NCBI nr
Match: XP_038896426.1 (S-protein homolog 1-like [Benincasa hispida]) HSP 1 Score: 232.3 bits (591), Expect = 2.5e-57 Identity = 100/131 (76.34%), Postives = 110/131 (83.97%), Query Frame = 0
BLAST of MELO3C021041 vs. NCBI nr
Match: XP_038896423.1 (S-protein homolog 1-like [Benincasa hispida]) HSP 1 Score: 225.3 bits (573), Expect = 3.1e-55 Identity = 95/128 (74.22%), Postives = 108/128 (84.38%), Query Frame = 0
BLAST of MELO3C021041 vs. NCBI nr
Match: KAA0026247.1 (pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK04330.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]) HSP 1 Score: 218.0 bits (554), Expect = 4.9e-53 Identity = 92/127 (72.44%), Postives = 104/127 (81.89%), Query Frame = 0
BLAST of MELO3C021041 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 9.0e-18 Identity = 46/113 (40.71%), Postives = 69/113 (61.06%), Query Frame = 0
BLAST of MELO3C021041 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 2.0e-17 Identity = 45/113 (39.82%), Postives = 70/113 (61.95%), Query Frame = 0
BLAST of MELO3C021041 vs. ExPASy Swiss-Prot
Match: Q9LW22 (S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.4e-10 Identity = 38/96 (39.58%), Postives = 54/96 (56.25%), Query Frame = 0
BLAST of MELO3C021041 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.0e-09 Identity = 31/99 (31.31%), Postives = 53/99 (53.54%), Query Frame = 0
BLAST of MELO3C021041 vs. ExPASy Swiss-Prot
Match: Q9FI83 (S-protein homolog 28 OS=Arabidopsis thaliana OX=3702 GN=SPH28 PE=3 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 5.9e-09 Identity = 31/99 (31.31%), Postives = 52/99 (52.53%), Query Frame = 0
BLAST of MELO3C021041 vs. ExPASy TrEMBL
Match: A0A5A7SNG3 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11658G00010 PE=3 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 2.4e-53 Identity = 92/127 (72.44%), Postives = 104/127 (81.89%), Query Frame = 0
BLAST of MELO3C021041 vs. ExPASy TrEMBL
Match: A0A5A7UAS6 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00440 PE=3 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 4.0e-53 Identity = 87/119 (73.11%), Postives = 104/119 (87.39%), Query Frame = 0
BLAST of MELO3C021041 vs. ExPASy TrEMBL
Match: A0A1S3CG61 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103500543 PE=3 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 4.0e-53 Identity = 87/119 (73.11%), Postives = 104/119 (87.39%), Query Frame = 0
BLAST of MELO3C021041 vs. ExPASy TrEMBL
Match: A0A1S3C8C8 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103497646 PE=3 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 6.9e-53 Identity = 91/127 (71.65%), Postives = 103/127 (81.10%), Query Frame = 0
BLAST of MELO3C021041 vs. ExPASy TrEMBL
Match: A0A5D3DIG9 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold278G00380 PE=3 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 3.2e-50 Identity = 84/119 (70.59%), Postives = 99/119 (83.19%), Query Frame = 0
BLAST of MELO3C021041 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 91.3 bits (225), Expect = 6.4e-19 Identity = 46/113 (40.71%), Postives = 69/113 (61.06%), Query Frame = 0
BLAST of MELO3C021041 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 ) HSP 1 Score: 90.1 bits (222), Expect = 1.4e-18 Identity = 45/113 (39.82%), Postives = 70/113 (61.95%), Query Frame = 0
BLAST of MELO3C021041 vs. TAIR 10
Match: AT5G04347.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 70.9 bits (172), Expect = 9.0e-13 Identity = 36/107 (33.64%), Postives = 57/107 (53.27%), Query Frame = 0
BLAST of MELO3C021041 vs. TAIR 10
Match: AT1G28305.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 69.3 bits (168), Expect = 2.6e-12 Identity = 38/115 (33.04%), Postives = 58/115 (50.43%), Query Frame = 0
BLAST of MELO3C021041 vs. TAIR 10
Match: AT3G26880.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 67.4 bits (163), Expect = 9.9e-12 Identity = 38/96 (39.58%), Postives = 54/96 (56.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
|