MELO3C020907 (gene) Melon (DHL92) v4

Overview


Name	MELO3C020907
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	protein SHORT-ROOT-like
Location	chr11: 2969573 .. 2973367 (-)
RNA-Seq Expression	MELO3C020907
Synteny	MELO3C020907

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCCTATTTCTTGCTTATGCTAACAATTTATTAAATATTGATTTAAGCTTACAATGTTATGATAGACATCACACCGATGTTTTCCTTTTCATGTTTACGTAAGTTTTCTTCCTTTCTTGAAGTTACAAATTTACCGTTAGAGACACGTAAATGTTAGATAAGTTTTTCTGTTCAAATCTTACCATCAATATCACTAAACAATTCAACTTTTATCATGTTAAACGACAATTATTTTATTCGTGTTTGTATGTTATTGTATGACAACTATATTATATTATGATGGTCACATAGGATGGCCGAATGGATGGGATGAGGGAGAGAGAGGGAGGAAAGGAAGATAAAAAGGATGGATAGAGAGTTGAAAGGTAGACAGAAGTACAGAACCCACTAAGTTGTGTGGGTTTTGAAATGATCTCTCCTCATTTGTTTAAACCTTTTTCTCAAACACTTTTATCATCTCTTTTGTCAGACCCCTCAATTTCTTGCCATTAGTTCCAATACCTTCTCCCCACTTTCATATTGCTTTTTTCTAAACCTTGAATAAAATAATTATATTAAGGTGTGTTTTTCTTCAGTGAAATTTCATTCATGGATACCTTGTTAAGGTTGGTCAATGATCTTGGATCCTCTGATCAATATTCTTATAACAATAATTCAAGCAGCAGCTCAAAGAATTCTAGTGATCGAAATCATTATAATTACTATCTTCAAAACCCACAATCTCAAGAATGTTTCAACAATTCGTTCATGGAGGATGAAGATCATTTCTCTGCATCCTCTTCTTCAAGTCACCACCACCACCACCAACTCCGGCAGCTTCAATGTTCCACCACCACGACAAGTACTACATCCACCGGTACATACGATGTTAAACTACTTTATGTTATTCTACTTTTTAAAGAACCTAATCTTTAAAAGTTTTAGTCGTTGGATTACAATATAAAATTTCTTTTTTCTAAGCGTTTTTTTTTAGGTCAAAAAATCTAAAATTTTATTGATAGTTTCATGTAAAGATTTATAAGTTTAAGTTCATATGTTTATAAAGAGAATTTTCATTACATTGGACTGTTTTCACACAACTTTCTAATTTTAAATATGTGTTTCTTTTATGTAGTAGTTGGTCTAATGGCTAAACTCTTGTATTTAGATGATGGGTTAAGTTATATTAGAGAAAAATTGGAACTTTTGTCTCTATTATTTATTTATTATAAGCTTAACACTTCTCCTTGGTTGAAAATGAAATGAAATAAAATGTGATTTTCTTGAGAAAATTGGTATGTATATGCATGATTGGGGAATGTTTTGATCCAGAAGATGAACATTTAGTTGGACATTAAAGATGAACGTGATGGTCAACACGTTCATGTTGAAAATCTCACGTTAGAATGACAAAGAGGTCTGACAAATTTTATAAGAGTCATGATTGATTATTACGTTTATCAACTTGCCAATTGATTTTGAAATATATATATTCTTTGTTTATCCAATATAGTATATGTTCAGGTGCTGCTGCTCCAGTTGATCACGACCTAAACTTTGAACTCTCTGAAGAATGGGCTTCTACAGTACTCCTCCAAACAGCTATCGCTATCGTCAACAAGAACACTACTCGAATCCAACACCTTATGTGGGTGTTGAATGAGCTTGGTTCTCCATATGGCGACATTGATCAAAAGCTAGCGTTCTACTTCCTTCAAGGCATGTTCAGTCGCGTCACCGACTCAGGTGCCAAGTGCTACAGAACCTTGGCAGCAGCATTGGAGAAACAGTCGTGTTTTGGGTCGATGAGAAGAATGGTGTTGAAGTTTGAGGAGGTGAGTCCATGGATGAGATTTGGCCATGTTGCTTCAAATGGCTCCTTAATGGAAGCTTTACGAGGTGAAAAGAAGTTGCATATAATTGATATTCCTGGAAGTTACTCCTCATTTTGCACTCAATGGCCAACTTTTATTGAAGCTTTGGCAACACAATCGGACCAAACTCCGCACCTTACTCTAACAACCTTGGTTGCAGCCAAATCGGAAGGAACCCTACGAGCTCATAAGGTAACTCTAATTATATTTAATAATTGTATTCATGGGAGGGAGAGGGTTGTATGTCCCGTGGAAACAAACTTCATTATATAAAGATTTCAGTGATTACAATGAAGTACTTGTTAGATAGACTTCTCCAATTAGTTTGAGCTCACACATTATATCCCCACATAAAACTTTTCTTGCTCGGGATGAAATCCCATCAATACAACATATTTAAACTCTCCTTAAGAAGAGTGAGCTCTTCTCATCTTTATGAAATAGCTTTCCAAACTAAATATGAGATAAAACTCTTTTCCACTCATAGTAATAAACAATATCTGGACGTACACTTTAATCACGTCTAAACTGGCAACATCCTTAACCAACAAAGGACACACAGAGATCAACAAACAAGTGCTTGTGGGTATCTTTCTCTGAATAATCTCTAAAACCCTTAGCACATCCTTTCTTCTCATTCAAAAAGGCTAACTCTAAAAAAGAAACTAGACCATAAAATATATGCTTCAACCTTAGCTTAAGATGACCTTCAAGGAATAATAAGATATTCTCTAAAAAAAACCAACAAATATGTACTAAATTAAACATATCAACAAGTAGCAAAAAAAATCTTTTGTAATCTACCCAACACAGAACATGATACTGAGTATATTTCAAAAGATGATATCCAAAGTTTTGATTGTAATAAAATCAGTCAAATTAAACACACTGGAACAACAAATATCTCATATAACTAAGGATATATTTTGATGATATTGTTGGTGGATGTTGATATGAACTAAATGCTTTTCAAAAACTAGAATAATACCCATCATGATTTTTTTCTTCTGCTATTATTTTTATGTTATTTTGGTTTCTCTTTCAATGGAAATTGATTGAAACACAAATACTTCTACTCATTTTTTTTGTTGACATAAATGCATTAATTTCAGAAACTGATGAAAGAAATAAGTAGAAGACTAGAGAAATTCGCAAGGCTTATGGGAATTTCCTTCAAATTCAAACCCATTTTCCACTACGGCGACGTTTCACACTTCGATTTCACACATTTACCCCTCAAACACGACGAGGCCGTCGCCGTCAACTGCTCCGGTGCCTTGCGCTCCGTCGCCCCCCTCCACAACCGCCGCGATTTTCTCATATCCTTATTTCGATCTTTGCGGCCCAAGATTATCACCGTCGTAGAGGAGGAAGCCGATCTCAACGCCGACGGCGGCGCCGACGACTTTTTCAAACACCTTCAGGAGTGTTTACGGTGGTTTAGGCTTTACTTTGATTCCTTGGACGGAAGTTTCCCGATCGTCACTGATGAGAGGTTAATGCTTGAACGCGCAGCTGGACGCTCCGTAGTGGACTTGCTTGCATGCGGGCTGGCGGAATCGGTGGAGAGGCGTGAGACGGCGGTGCGTTGGACGCGTCGTTTGCATGACGGTGGTTTTAAACCGGTGTCGTTTAGTGAGGATGTAAATGATGATGTACGCGCGCTTTTGAGGAGGTACAAGGATGGGTGGACAGTGATGGACGGCGACGGAGCCGGAGCCGGGATGTTCTTGGCTTGGAAGGGGCAGCCGGTGGTTTGGGCCGCCGCGTGGGTGCCTGGACAGGTAGACGGAGAGAAGACACACGTGTAAATTTGGCCTTCGCACGTGCTTTAGTGTATTATTTATTGAAAGACTAAAATTTGAACGTGAGATTTAAATAAAAAATTAAACTTGGCGATCCCATTTTTCCACTTTGGATTGTTTTTTTTAATACAAATTGA

mRNA sequence

TCCCTATTTCTTGCTTATGCTAACAATTTATTAAATATTGATTTAAGCTTACAATGTTATGATAGACATCACACCGATGTTTTCCTTTTCATGTTTACGTAAGTTTTCTTCCTTTCTTGAAGTTACAAATTTACCGTTAGAGACACGTAAATGTTAGATAAGTTTTTCTGTTCAAATCTTACCATCAATATCACTAAACAATTCAACTTTTATCATGTTAAACGACAATTATTTTATTCGTGTTTGTATGTTATTGTATGACAACTATATTATATTATGATGGTCACATAGGATGGCCGAATGGATGGGATGAGGGAGAGAGAGGGAGGAAAGGAAGATAAAAAGGATGGATAGAGAGTTGAAAGTGAAATTTCATTCATGGATACCTTGTTAAGGTTGGTCAATGATCTTGGATCCTCTGATCAATATTCTTATAACAATAATTCAAGCAGCAGCTCAAAGAATTCTAGTGATCGAAATCATTATAATTACTATCTTCAAAACCCACAATCTCAAGAATGTTTCAACAATTCGTTCATGGAGGATGAAGATCATTTCTCTGCATCCTCTTCTTCAAGTCACCACCACCACCACCAACTCCGGCAGCTTCAATGTTCCACCACCACGACAAGTACTACATCCACCGTAGTTGGTCTAATGGCTAAACTCTTGTATTTAGATGATGGGTTAAGTGCTGCTGCTCCAGTTGATCACGACCTAAACTTTGAACTCTCTGAAGAATGGGCTTCTACAGTACTCCTCCAAACAGCTATCGCTATCGTCAACAAGAACACTACTCGAATCCAACACCTTATGTGGGTGTTGAATGAGCTTGGTTCTCCATATGGCGACATTGATCAAAAGCTAGCGTTCTACTTCCTTCAAGGCATGTTCAGTCGCGTCACCGACTCAGGTGCCAAGTGCTACAGAACCTTGGCAGCAGCATTGGAGAAACAGTCGTGTTTTGGGTCGATGAGAAGAATGGTGTTGAAGTTTGAGGAGGTGAGTCCATGGATGAGATTTGGCCATGTTGCTTCAAATGGCTCCTTAATGGAAGCTTTACGAGGTGAAAAGAAGTTGCATATAATTGATATTCCTGGAAGTTACTCCTCATTTTGCACTCAATGGCCAACTTTTATTGAAGCTTTGGCAACACAATCGGACCAAACTCCGCACCTTACTCTAACAACCTTGGTTGCAGCCAAATCGGAAGGAACCCTACGAGCTCATAAGAAACTGATGAAAGAAATAAGTAGAAGACTAGAGAAATTCGCAAGGCTTATGGGAATTTCCTTCAAATTCAAACCCATTTTCCACTACGGCGACGTTTCACACTTCGATTTCACACATTTACCCCTCAAACACGACGAGGCCGTCGCCGTCAACTGCTCCGGTGCCTTGCGCTCCGTCGCCCCCCTCCACAACCGCCGCGATTTTCTCATATCCTTATTTCGATCTTTGCGGCCCAAGATTATCACCGTCGTAGAGGAGGAAGCCGATCTCAACGCCGACGGCGGCGCCGACGACTTTTTCAAACACCTTCAGGAGTGTTTACGGTGGTTTAGGCTTTACTTTGATTCCTTGGACGGAAGTTTCCCGATCGTCACTGATGAGAGGTTAATGCTTGAACGCGCAGCTGGACGCTCCGTAGTGGACTTGCTTGCATGCGGGCTGGCGGAATCGGTGGAGAGGCGTGAGACGGCGGTGCGTTGGACGCGTCGTTTGCATGACGGTGGTTTTAAACCGGTGTCGTTTAGTGAGGATGTAAATGATGATGTACGCGCGCTTTTGAGGAGGTACAAGGATGGGTGGACAGTGATGGACGGCGACGGAGCCGGAGCCGGGATGTTCTTGGCTTGGAAGGGGCAGCCGGTGGTTTGGGCCGCCGCGTGGGTGCCTGGACAGGTAGACGGAGAGAAGACACACGTGTAAATTTGGCCTTCGCACGTGCTTTAGTGTATTATTTATTGAAAGACTAAAATTTGAACGTGAGATTTAAATAAAAAATTAAACTTGGCGATCCCATTTTTCCACTTTGGATTGTTTTTTTTAATACAAATTGA

Coding sequence (CDS)

ATGGATACCTTGTTAAGGTTGGTCAATGATCTTGGATCCTCTGATCAATATTCTTATAACAATAATTCAAGCAGCAGCTCAAAGAATTCTAGTGATCGAAATCATTATAATTACTATCTTCAAAACCCACAATCTCAAGAATGTTTCAACAATTCGTTCATGGAGGATGAAGATCATTTCTCTGCATCCTCTTCTTCAAGTCACCACCACCACCACCAACTCCGGCAGCTTCAATGTTCCACCACCACGACAAGTACTACATCCACCGTAGTTGGTCTAATGGCTAAACTCTTGTATTTAGATGATGGGTTAAGTGCTGCTGCTCCAGTTGATCACGACCTAAACTTTGAACTCTCTGAAGAATGGGCTTCTACAGTACTCCTCCAAACAGCTATCGCTATCGTCAACAAGAACACTACTCGAATCCAACACCTTATGTGGGTGTTGAATGAGCTTGGTTCTCCATATGGCGACATTGATCAAAAGCTAGCGTTCTACTTCCTTCAAGGCATGTTCAGTCGCGTCACCGACTCAGGTGCCAAGTGCTACAGAACCTTGGCAGCAGCATTGGAGAAACAGTCGTGTTTTGGGTCGATGAGAAGAATGGTGTTGAAGTTTGAGGAGGTGAGTCCATGGATGAGATTTGGCCATGTTGCTTCAAATGGCTCCTTAATGGAAGCTTTACGAGGTGAAAAGAAGTTGCATATAATTGATATTCCTGGAAGTTACTCCTCATTTTGCACTCAATGGCCAACTTTTATTGAAGCTTTGGCAACACAATCGGACCAAACTCCGCACCTTACTCTAACAACCTTGGTTGCAGCCAAATCGGAAGGAACCCTACGAGCTCATAAGAAACTGATGAAAGAAATAAGTAGAAGACTAGAGAAATTCGCAAGGCTTATGGGAATTTCCTTCAAATTCAAACCCATTTTCCACTACGGCGACGTTTCACACTTCGATTTCACACATTTACCCCTCAAACACGACGAGGCCGTCGCCGTCAACTGCTCCGGTGCCTTGCGCTCCGTCGCCCCCCTCCACAACCGCCGCGATTTTCTCATATCCTTATTTCGATCTTTGCGGCCCAAGATTATCACCGTCGTAGAGGAGGAAGCCGATCTCAACGCCGACGGCGGCGCCGACGACTTTTTCAAACACCTTCAGGAGTGTTTACGGTGGTTTAGGCTTTACTTTGATTCCTTGGACGGAAGTTTCCCGATCGTCACTGATGAGAGGTTAATGCTTGAACGCGCAGCTGGACGCTCCGTAGTGGACTTGCTTGCATGCGGGCTGGCGGAATCGGTGGAGAGGCGTGAGACGGCGGTGCGTTGGACGCGTCGTTTGCATGACGGTGGTTTTAAACCGGTGTCGTTTAGTGAGGATGTAAATGATGATGTACGCGCGCTTTTGAGGAGGTACAAGGATGGGTGGACAGTGATGGACGGCGACGGAGCCGGAGCCGGGATGTTCTTGGCTTGGAAGGGGCAGCCGGTGGTTTGGGCCGCCGCGTGGGTGCCTGGACAGGTAGACGGAGAGAAGACACACGTGTAA

Protein sequence

MDTLLRLVNDLGSSDQYSYNNNSSSSSKNSSDRNHYNYYLQNPQSQECFNNSFMEDEDHFSASSSSSHHHHHQLRQLQCSTTTTSTTSTVVGLMAKLLYLDDGLSAAAPVDHDLNFELSEEWASTVLLQTAIAIVNKNTTRIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSGAKCYRTLAAALEKQSCFGSMRRMVLKFEEVSPWMRFGHVASNGSLMEALRGEKKLHIIDIPGSYSSFCTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFARLMGISFKFKPIFHYGDVSHFDFTHLPLKHDEAVAVNCSGALRSVAPLHNRRDFLISLFRSLRPKIITVVEEEADLNADGGADDFFKHLQECLRWFRLYFDSLDGSFPIVTDERLMLERAAGRSVVDLLACGLAESVERRETAVRWTRRLHDGGFKPVSFSEDVNDDVRALLRRYKDGWTVMDGDGAGAGMFLAWKGQPVVWAAAWVPGQVDGEKTHV

Homology

[Close]

BLAST of MELO3C020907 vs. NCBI nr
Match: XP_008457838.1 (PREDICTED: protein SHORT-ROOT-like isoform X1 [Cucumis melo] >XP_008457842.1 PREDICTED: protein SHORT-ROOT-like isoform X1 [Cucumis melo] >XP_008457843.1 PREDICTED: protein SHORT-ROOT-like isoform X1 [Cucumis melo] >XP_016902150.1 PREDICTED: protein SHORT-ROOT-like isoform X1 [Cucumis melo] >KAA0045835.1 protein SHORT-ROOT-like isoform X1 [Cucumis melo var. makuwa] >TYJ99448.1 protein SHORT-ROOT-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 998.8 bits (2581), Expect = 1.7e-287
Identity = 501/517 (96.91%), Postives = 501/517 (96.91%), Query Frame = 0


Query: 1   MDTLLRLVNDLGSSDQYSYNNNSSSSSKNSSDRNHYNYYLQNPQSQECFNNSFMEDEDHF 60
           MDTLLRLVNDLGSSDQYSYNNNSSSSSKNSSDRNHYNYYLQNPQSQECFNNSFMEDEDHF
Sbjct: 1   MDTLLRLVNDLGSSDQYSYNNNSSSSSKNSSDRNHYNYYLQNPQSQECFNNSFMEDEDHF 60

Query: 61  SASSSSSHHHHHQLRQLQCSTTTTSTTSTVVGLMAKLLYLDDGLSAAAPVDHDLNFELSE 120
           SASSSSSHHHHHQLRQLQCSTTTTSTTST                AAAPVDHDLNFELSE
Sbjct: 61  SASSSSSHHHHHQLRQLQCSTTTTSTTST---------------GAAAPVDHDLNFELSE 120

Query: 121 EWASTVLLQTAIAIVNKNTTRIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSGA 180
           EWASTVLLQTAIAIVNKNTTRIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSGA
Sbjct: 121 EWASTVLLQTAIAIVNKNTTRIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSGA 180

Query: 181 KCYRTLAAALEKQSCFGSMRRMVLKFEEVSPWMRFGHVASNGSLMEALRGEKKLHIIDIP 240
           KCYRTLAAALEKQSCFGSMRRMVLKFEEVSPWMRFGHVASNGSLMEALRGEKKLHIIDIP
Sbjct: 181 KCYRTLAAALEKQSCFGSMRRMVLKFEEVSPWMRFGHVASNGSLMEALRGEKKLHIIDIP 240

Query: 241 GSYSSFCTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFAR 300
           GSYSSFCTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFAR
Sbjct: 241 GSYSSFCTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFAR 300

Query: 301 LMGISFKFKPIFHYGDVSHFDFTHLPLKHDEAVAVNCSGALRSVAPLHNRRDFLISLFRS 360
           LMGISFKFKPIFHYGDVSHFDFTHLPLKHDEAVAVNCSGALRSVAPLHNRRDFLISLFRS
Sbjct: 301 LMGISFKFKPIFHYGDVSHFDFTHLPLKHDEAVAVNCSGALRSVAPLHNRRDFLISLFRS 360

Query: 361 LRPKIITVVEEEADLNADGGADDFFKHLQECLRWFRLYFDSLDGSFPIVTDERLMLERAA 420
           LRPKIITVVEEEADLNADGGADDFFKHLQECLRWFRLYFDSLDGSFPIVTDERLMLERAA
Sbjct: 361 LRPKIITVVEEEADLNADGGADDFFKHLQECLRWFRLYFDSLDGSFPIVTDERLMLERAA 420

Query: 421 GRSVVDLLACGLAESVERRETAVRWTRRLHDGGFKPVSFSEDVNDDVRALLRRYKDGWTV 480
           GRSVVDLLACGLAESVERRETAVRWTRRLHDGGFKPVSFSEDVNDDVRALLRRYKDGWTV
Sbjct: 421 GRSVVDLLACGLAESVERRETAVRWTRRLHDGGFKPVSFSEDVNDDVRALLRRYKDGWTV 480

Query: 481 MDGDGAGAGMFLAWKGQPVVWAAAWVPGQVDGEKTHV 518
           MDGDGAGAGMFLAWKGQPVVWAAAWVPGQVDGEKTHV
Sbjct: 481 MDGDGAGAGMFLAWKGQPVVWAAAWVPGQVDGEKTHV 502

[Close]

BLAST of MELO3C020907 vs. NCBI nr
Match: XP_016902151.1 (PREDICTED: protein SHORT-ROOT-like isoform X2 [Cucumis melo])

HSP 1 Score: 990.3 bits (2559), Expect = 6.1e-285
Identity = 497/517 (96.13%), Postives = 497/517 (96.13%), Query Frame = 0


Query: 1   MDTLLRLVNDLGSSDQYSYNNNSSSSSKNSSDRNHYNYYLQNPQSQECFNNSFMEDEDHF 60
           MDTLLRLVNDLGSSDQYSYNNNSSSSSKNSSDRNHYNYYLQNPQSQECFNNSFMEDEDHF
Sbjct: 1   MDTLLRLVNDLGSSDQYSYNNNSSSSSKNSSDRNHYNYYLQNPQSQECFNNSFMEDEDHF 60

Query: 61  SASSSSSHHHHHQLRQLQCSTTTTSTTSTVVGLMAKLLYLDDGLSAAAPVDHDLNFELSE 120
           SASSSSSHHHHHQLRQLQCSTTTT                    SAAAPVDHDLNFELSE
Sbjct: 61  SASSSSSHHHHHQLRQLQCSTTTT--------------------SAAAPVDHDLNFELSE 120

Query: 121 EWASTVLLQTAIAIVNKNTTRIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSGA 180
           EWASTVLLQTAIAIVNKNTTRIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSGA
Sbjct: 121 EWASTVLLQTAIAIVNKNTTRIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSGA 180

Query: 181 KCYRTLAAALEKQSCFGSMRRMVLKFEEVSPWMRFGHVASNGSLMEALRGEKKLHIIDIP 240
           KCYRTLAAALEKQSCFGSMRRMVLKFEEVSPWMRFGHVASNGSLMEALRGEKKLHIIDIP
Sbjct: 181 KCYRTLAAALEKQSCFGSMRRMVLKFEEVSPWMRFGHVASNGSLMEALRGEKKLHIIDIP 240

Query: 241 GSYSSFCTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFAR 300
           GSYSSFCTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFAR
Sbjct: 241 GSYSSFCTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFAR 300

Query: 301 LMGISFKFKPIFHYGDVSHFDFTHLPLKHDEAVAVNCSGALRSVAPLHNRRDFLISLFRS 360
           LMGISFKFKPIFHYGDVSHFDFTHLPLKHDEAVAVNCSGALRSVAPLHNRRDFLISLFRS
Sbjct: 301 LMGISFKFKPIFHYGDVSHFDFTHLPLKHDEAVAVNCSGALRSVAPLHNRRDFLISLFRS 360

Query: 361 LRPKIITVVEEEADLNADGGADDFFKHLQECLRWFRLYFDSLDGSFPIVTDERLMLERAA 420
           LRPKIITVVEEEADLNADGGADDFFKHLQECLRWFRLYFDSLDGSFPIVTDERLMLERAA
Sbjct: 361 LRPKIITVVEEEADLNADGGADDFFKHLQECLRWFRLYFDSLDGSFPIVTDERLMLERAA 420

Query: 421 GRSVVDLLACGLAESVERRETAVRWTRRLHDGGFKPVSFSEDVNDDVRALLRRYKDGWTV 480
           GRSVVDLLACGLAESVERRETAVRWTRRLHDGGFKPVSFSEDVNDDVRALLRRYKDGWTV
Sbjct: 421 GRSVVDLLACGLAESVERRETAVRWTRRLHDGGFKPVSFSEDVNDDVRALLRRYKDGWTV 480

Query: 481 MDGDGAGAGMFLAWKGQPVVWAAAWVPGQVDGEKTHV 518
           MDGDGAGAGMFLAWKGQPVVWAAAWVPGQVDGEKTHV
Sbjct: 481 MDGDGAGAGMFLAWKGQPVVWAAAWVPGQVDGEKTHV 497

[Close]

BLAST of MELO3C020907 vs. NCBI nr
Match: XP_031736993.1 (protein SHORT-ROOT isoform X3 [Cucumis sativus] >KGN61999.1 hypothetical protein Csa_006787 [Cucumis sativus])

HSP 1 Score: 931.4 bits (2406), Expect = 3.4e-267
Identity = 473/518 (91.31%), Postives = 483/518 (93.24%), Query Frame = 0


Query: 1   MDTLLRLVND-LGSSDQYSYNNNSSSSSKNSSDRNHYNYYLQNPQSQECFNNSFMEDEDH 60
           MDTLLRLVND L SSDQYSYNNNSSSSSKNSSD+NHYN+YLQNPQSQECFNN FMEDEDH
Sbjct: 1   MDTLLRLVNDRLESSDQYSYNNNSSSSSKNSSDQNHYNFYLQNPQSQECFNNLFMEDEDH 60

Query: 61  FSASSSSSHHHHHQLRQLQCSTTTTSTTSTVVGLMAKLLYLDDGLSAAAPVDHDLNFELS 120
           FSASSSSSHHHHHQLRQLQCSTTTTSTTST V                APVD D NF+LS
Sbjct: 61  FSASSSSSHHHHHQLRQLQCSTTTTSTTSTGV---------------VAPVDQDPNFDLS 120

Query: 121 EEWASTVLLQTAIAIVNKNTTRIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSG 180
           EEWAST+LLQTAIAIVN NT RIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSG
Sbjct: 121 EEWASTILLQTAIAIVNNNTPRIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSG 180

Query: 181 AKCYRTLAAALEKQSCFGSMRRMVLKFEEVSPWMRFGHVASNGSLMEALRGEKKLHIIDI 240
           AKCY TLAAALEKQSCF SMRRMVLKFEEVSPWMRFG+VASNGSLMEAL+GEKKLHIIDI
Sbjct: 181 AKCYGTLAAALEKQSCFESMRRMVLKFEEVSPWMRFGYVASNGSLMEALQGEKKLHIIDI 240

Query: 241 PGSYSSFCTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFA 300
            GSYSSFCTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFA
Sbjct: 241 AGSYSSFCTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFA 300

Query: 301 RLMGISFKFKPIFHYGDVSHFDFTHLPLKHDEAVAVNCSGALRSVAPLHNRRDFLISLFR 360
           RLMGI FKFKPIFHYGDVSHFDFT+LPLKHDEAVAVNCSGALRSVAPL NRRDFLISLFR
Sbjct: 301 RLMGIPFKFKPIFHYGDVSHFDFTNLPLKHDEAVAVNCSGALRSVAPLQNRRDFLISLFR 360

Query: 361 SLRPKIITVVEEEADLNADGGADDFFKHLQECLRWFRLYFDSLDGSFPIVTDERLMLERA 420
           SLRPKIITVVEEEADLNA GGADDF KHLQECLRWFRLYFDSLDGSFP+VTDERLMLERA
Sbjct: 361 SLRPKIITVVEEEADLNAHGGADDFVKHLQECLRWFRLYFDSLDGSFPVVTDERLMLERA 420

Query: 421 AGRSVVDLLACGLAESVERRETAVRWTRRLHDGGFKPVSFSEDVNDDVRALLRRYKDGWT 480
           AGR+VVDLLA GLAESVERRETA RW RR+HDGGFKPVSFSEDVNDDVRALLRRYKDGWT
Sbjct: 421 AGRAVVDLLARGLAESVERRETAARWVRRMHDGGFKPVSFSEDVNDDVRALLRRYKDGWT 480

Query: 481 VMDGDGAGAGMFLAWKGQPVVWAAAWVPGQVDGEKTHV 518
           VMDGDGAGAGMFLAWKGQPVVWAAAWVPGQVDGEKT V
Sbjct: 481 VMDGDGAGAGMFLAWKGQPVVWAAAWVPGQVDGEKTPV 503

[Close]

BLAST of MELO3C020907 vs. NCBI nr
Match: XP_011649340.2 (protein SHORT-ROOT isoform X1 [Cucumis sativus])

HSP 1 Score: 931.4 bits (2406), Expect = 3.4e-267
Identity = 473/518 (91.31%), Postives = 483/518 (93.24%), Query Frame = 0


Query: 1   MDTLLRLVND-LGSSDQYSYNNNSSSSSKNSSDRNHYNYYLQNPQSQECFNNSFMEDEDH 60
           MDTLLRLVND L SSDQYSYNNNSSSSSKNSSD+NHYN+YLQNPQSQECFNN FMEDEDH
Sbjct: 35  MDTLLRLVNDRLESSDQYSYNNNSSSSSKNSSDQNHYNFYLQNPQSQECFNNLFMEDEDH 94

Query: 61  FSASSSSSHHHHHQLRQLQCSTTTTSTTSTVVGLMAKLLYLDDGLSAAAPVDHDLNFELS 120
           FSASSSSSHHHHHQLRQLQCSTTTTSTTST V                APVD D NF+LS
Sbjct: 95  FSASSSSSHHHHHQLRQLQCSTTTTSTTSTGV---------------VAPVDQDPNFDLS 154

Query: 121 EEWASTVLLQTAIAIVNKNTTRIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSG 180
           EEWAST+LLQTAIAIVN NT RIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSG
Sbjct: 155 EEWASTILLQTAIAIVNNNTPRIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSG 214

Query: 181 AKCYRTLAAALEKQSCFGSMRRMVLKFEEVSPWMRFGHVASNGSLMEALRGEKKLHIIDI 240
           AKCY TLAAALEKQSCF SMRRMVLKFEEVSPWMRFG+VASNGSLMEAL+GEKKLHIIDI
Sbjct: 215 AKCYGTLAAALEKQSCFESMRRMVLKFEEVSPWMRFGYVASNGSLMEALQGEKKLHIIDI 274

Query: 241 PGSYSSFCTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFA 300
            GSYSSFCTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFA
Sbjct: 275 AGSYSSFCTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFA 334

Query: 301 RLMGISFKFKPIFHYGDVSHFDFTHLPLKHDEAVAVNCSGALRSVAPLHNRRDFLISLFR 360
           RLMGI FKFKPIFHYGDVSHFDFT+LPLKHDEAVAVNCSGALRSVAPL NRRDFLISLFR
Sbjct: 335 RLMGIPFKFKPIFHYGDVSHFDFTNLPLKHDEAVAVNCSGALRSVAPLQNRRDFLISLFR 394

Query: 361 SLRPKIITVVEEEADLNADGGADDFFKHLQECLRWFRLYFDSLDGSFPIVTDERLMLERA 420
           SLRPKIITVVEEEADLNA GGADDF KHLQECLRWFRLYFDSLDGSFP+VTDERLMLERA
Sbjct: 395 SLRPKIITVVEEEADLNAHGGADDFVKHLQECLRWFRLYFDSLDGSFPVVTDERLMLERA 454

Query: 421 AGRSVVDLLACGLAESVERRETAVRWTRRLHDGGFKPVSFSEDVNDDVRALLRRYKDGWT 480
           AGR+VVDLLA GLAESVERRETA RW RR+HDGGFKPVSFSEDVNDDVRALLRRYKDGWT
Sbjct: 455 AGRAVVDLLARGLAESVERRETAARWVRRMHDGGFKPVSFSEDVNDDVRALLRRYKDGWT 514

Query: 481 VMDGDGAGAGMFLAWKGQPVVWAAAWVPGQVDGEKTHV 518
           VMDGDGAGAGMFLAWKGQPVVWAAAWVPGQVDGEKT V
Sbjct: 515 VMDGDGAGAGMFLAWKGQPVVWAAAWVPGQVDGEKTPV 537

[Close]

BLAST of MELO3C020907 vs. NCBI nr
Match: XP_031736992.1 (protein SHORT-ROOT isoform X2 [Cucumis sativus])

HSP 1 Score: 925.2 bits (2390), Expect = 2.4e-265
Identity = 472/518 (91.12%), Postives = 482/518 (93.05%), Query Frame = 0


Query: 1   MDTLLRLVND-LGSSDQYSYNNNSSSSSKNSSDRNHYNYYLQNPQSQECFNNSFMEDEDH 60
           MDTLLRLVND L SSDQYSYNNNSSSSSKNSSD+NHYN+YLQNPQSQECFNN FMEDEDH
Sbjct: 35  MDTLLRLVNDRLESSDQYSYNNNSSSSSKNSSDQNHYNFYLQNPQSQECFNNLFMEDEDH 94

Query: 61  FSASSSSSHHHHHQLRQLQCSTTTTSTTSTVVGLMAKLLYLDDGLSAAAPVDHDLNFELS 120
           FSASSSSSHHHHHQLRQLQCSTTTTSTTST V                APVD D NF+LS
Sbjct: 95  FSASSSSSHHHHHQLRQLQCSTTTTSTTSTGV---------------VAPVDQDPNFDLS 154

Query: 121 EEWASTVLLQTAIAIVNKNTTRIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSG 180
           EEWAST+LLQTAIAIVN NT RIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSG
Sbjct: 155 EEWASTILLQTAIAIVNNNTPRIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSG 214

Query: 181 AKCYRTLAAALEKQSCFGSMRRMVLKFEEVSPWMRFGHVASNGSLMEALRGEKKLHIIDI 240
           AKCY TLAAALEKQSCF SMRRMVLKFEEVSPWMRFG+VASNGSLMEAL+GEKKLHIIDI
Sbjct: 215 AKCYGTLAAALEKQSCFESMRRMVLKFEEVSPWMRFGYVASNGSLMEALQGEKKLHIIDI 274

Query: 241 PGSYSSFCTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFA 300
            GSYSSFCTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAH KLMKEISRRLEKFA
Sbjct: 275 AGSYSSFCTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAH-KLMKEISRRLEKFA 334

Query: 301 RLMGISFKFKPIFHYGDVSHFDFTHLPLKHDEAVAVNCSGALRSVAPLHNRRDFLISLFR 360
           RLMGI FKFKPIFHYGDVSHFDFT+LPLKHDEAVAVNCSGALRSVAPL NRRDFLISLFR
Sbjct: 335 RLMGIPFKFKPIFHYGDVSHFDFTNLPLKHDEAVAVNCSGALRSVAPLQNRRDFLISLFR 394

Query: 361 SLRPKIITVVEEEADLNADGGADDFFKHLQECLRWFRLYFDSLDGSFPIVTDERLMLERA 420
           SLRPKIITVVEEEADLNA GGADDF KHLQECLRWFRLYFDSLDGSFP+VTDERLMLERA
Sbjct: 395 SLRPKIITVVEEEADLNAHGGADDFVKHLQECLRWFRLYFDSLDGSFPVVTDERLMLERA 454

Query: 421 AGRSVVDLLACGLAESVERRETAVRWTRRLHDGGFKPVSFSEDVNDDVRALLRRYKDGWT 480
           AGR+VVDLLA GLAESVERRETA RW RR+HDGGFKPVSFSEDVNDDVRALLRRYKDGWT
Sbjct: 455 AGRAVVDLLARGLAESVERRETAARWVRRMHDGGFKPVSFSEDVNDDVRALLRRYKDGWT 514

Query: 481 VMDGDGAGAGMFLAWKGQPVVWAAAWVPGQVDGEKTHV 518
           VMDGDGAGAGMFLAWKGQPVVWAAAWVPGQVDGEKT V
Sbjct: 515 VMDGDGAGAGMFLAWKGQPVVWAAAWVPGQVDGEKTPV 536

[Close]

BLAST of MELO3C020907 vs. ExPASy Swiss-Prot
Match: Q9SZF7 (Protein SHORT-ROOT OS=Arabidopsis thaliana OX=3702 GN=SHR PE=1 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 8.9e-130
Identity = 266/536 (49.63%), Postives = 349/536 (65.11%), Query Frame = 0


Query: 1   MDTLLRLVNDLGSSDQYSYNNNSSSSSKNSSDRN-------HYNYYLQNPQSQECFNNSF 60
           MDTL RLV+        S   N SS S+ S+          HYN + QN   +ECF N F
Sbjct: 1   MDTLFRLVSLQQQQQSDSIITNQSSLSRTSTTTTGSPQTAYHYN-FPQNDVVEECF-NFF 60

Query: 61  MEDEDHFSASSSSSHHHHHQLRQLQCSTTT-------TSTTSTVVGLMAKLL-------- 120
           M++ED  S+SS  +HH+H+         TT       TS+T +     A L         
Sbjct: 61  MDEEDLSSSSSHHNHHNHNNPNTYYSPFTTPTQYHPATSSTPSSTAAAAALASPYSSSGH 120

Query: 121 YLDDGLSAAAPVDHDLNFELSEEWASTVLLQTAIAIVNKNTTRIQHLMWVLNELGSPYGD 180
           + D    +        +F  + +WA +VLL+ A A  +K+T R Q ++W LNEL SPYGD
Sbjct: 121 HNDPSAFSIPQTPPSFDFSANAKWADSVLLEAARAFSDKDTARAQQILWTLNELSSPYGD 180

Query: 181 IDQKLAFYFLQGMFSRVTDSGAKCYRTL--AAALEKQSCFGSMRRMVLKFEEVSPWMRFG 240
            +QKLA YFLQ +F+R+T SG +CYRT+  AAA EK   F S R+ VLKF+EVSPW  FG
Sbjct: 181 TEQKLASYFLQALFNRMTGSGERCYRTMVTAAATEKTCSFESTRKTVLKFQEVSPWATFG 240

Query: 241 HVASNGSLMEALRGEKKLHIIDIPGSYSSFCTQWPTFIEALATQSDQTPHLTLTTLVAA- 300
           HVA+NG+++EA+ GE K+HI+DI    S+FCTQWPT +EALAT+SD TPHL LTT+V A 
Sbjct: 241 HVAANGAILEAVDGEAKIHIVDIS---STFCTQWPTLLEALATRSDDTPHLRLTTVVVAN 300

Query: 301 KSEGTLRAHKKLMKEISRRLEKFARLMGISFKFKPIFHYGDVSHFDFTHLPLKHDEAVAV 360
           K      A  ++MKEI  R+EKFARLMG+ FKF  I H GD+S FD   L +K DE +A+
Sbjct: 301 KFVNDQTASHRMMKEIGNRMEKFARLMGVPFKFNIIHHVGDLSEFDLNELDVKPDEVLAI 360

Query: 361 NCSGALRSVAPLHNRRDFLISLFRSLRPKIITVVEEEADL--NADGGADD-FFKHLQECL 420
           NC GA+  +A   + RD +IS FR LRP+I+TVVEEEADL    +GG DD F +   ECL
Sbjct: 361 NCVGAMHGIASRGSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECL 420

Query: 421 RWFRLYFDSLDGSFPIVTDERLMLERAAGRSVVDLLACGLAESVERRETAVRWTRRLHDG 480
           RWFR+ F+S + SFP  ++ERLMLERAAGR++VDL+AC  ++S ERRETA +W+RR+ + 
Sbjct: 421 RWFRVCFESWEESFPRTSNERLMLERAAGRAIVDLVACEPSDSTERRETARKWSRRMRNS 480

Query: 481 GFKPVSFSEDVNDDVRALLRRYKDG-WTVMDGDGAGAGMFLAWKGQPVVWAAAWVP 508
           GF  V +S++V DDVRALLRRYK+G W+++    A AG+FL W+ QPVVWA+AW P
Sbjct: 481 GFGAVGYSDEVADDVRALLRRYKEGVWSMVQCPDA-AGIFLCWRDQPVVWASAWRP 530

[Close]

BLAST of MELO3C020907 vs. ExPASy Swiss-Prot
Match: A2YN56 (Protein SHORT-ROOT 1 OS=Oryza sativa subsp. indica OX=39946 GN=SHR1 PE=3 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 1.2e-113
Identity = 257/606 (42.41%), Postives = 353/606 (58.25%), Query Frame = 0


Query: 1   MDTLLRLVNDLGSSDQY-------SYNNNSSSSSKNSSDRNHYN---------------- 60
           MDTL RLV+   +S+Q        SYN+ S++SS + S  +  N                
Sbjct: 1   MDTLFRLVSLQAASEQQQQQQQSASYNSRSTTSSGSRSSSHQTNASYSYYHHSSNSGGGG 60

Query: 61  -----------------YYLQNPQSQECFN---NSFMEDEDHFSASSSSSHHHHH---QL 120
                            YY   P  +EC N   +    DED FS+SSSS H HH    Q 
Sbjct: 61  GGGGGYYYGGQQPPPSQYYYLEPYQEECGNAPHHQLYMDED-FSSSSSSRHFHHGAPVQQ 120

Query: 121 RQLQCSTTTTSTTST-VVGLMAKLLYLDDGLSAAAPVDH--DLNFELSE----------- 180
           +Q   S+T T T  T  +   +       GL  AA +    DLN + S            
Sbjct: 121 QQPPASSTPTGTAPTPPLSTSSTAAGAGHGLFEAADLSFPPDLNLDFSSPASSSGGGTAS 180

Query: 181 ----------EWASTVLLQTAIAIVNKNTTRIQHLMWVLNELGSPYGDIDQKLAFYFLQG 240
                      WAS +LL+ A ++  +++ R+Q LMW+LNEL SPYGD++QKLA YFLQG
Sbjct: 181 SGAVGGGGGGRWASQLLLECARSVAARDSQRVQQLMWMLNELASPYGDVEQKLASYFLQG 240

Query: 241 MFSRVTDSGAKCYRTLAAALEKQSCFGSMRRMVLKFEEVSPWMRFGHVASNGSLME---- 300
           +F+R+T SG +  RTLAAA ++ + F S RR  L+F+E+SPW  FGHVA+NG+++E    
Sbjct: 241 LFARLTASGQRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLE 300

Query: 301 ----ALRGEKKLHIIDIPGSYSSFCTQWPTFIEALATQS-DQTPHLTLTTLVAAKSEGTL 360
               A    ++ HI+D+    ++FCTQWPT +EALAT+S D+TPHL++TT+V+A      
Sbjct: 301 VAAAASSETQRFHILDLS---NTFCTQWPTLLEALATRSADETPHLSITTVVSAAPSAPT 360

Query: 361 RAHKKLMKEISRRLEKFARLMGISFKFKPIFHYGDVSHFDFTHLPLKH---DEAVAVNCS 420
            A +++M+EI +R+EKFARLMG+ F+F+ + H GD++  D   L L+      A+AVNC 
Sbjct: 361 AAVQRVMREIGQRMEKFARLMGVPFRFRAVHHSGDLAELDLDALDLREGGATTALAVNCV 420

Query: 421 GALRSVAP-LHNRRDFLISLFRSLRPKIITVVEEEADLNA----------DGGADD--FF 480
            +LR V P    RRD   +  R L P+++TVVEEEADL A          +GG  +  F 
Sbjct: 421 NSLRGVVPGRARRRDAFAASLRRLDPRVVTVVEEEADLVASDPDASSATEEGGDTEAAFL 480

Query: 481 KHLQECLRWFRLYFDSLDGSFPIVTDERLMLERAAGRSVVDLLACGLAESVERRETAVRW 508
           K   E LR+F  Y DSL+ SFP  ++ERL LER AGR++VDL++C  +ES+ERRETA  W
Sbjct: 481 KVFGEGLRFFSAYMDSLEESFPKTSNERLALERGAGRAIVDLVSCPASESMERRETAASW 540

[Close]

BLAST of MELO3C020907 vs. ExPASy Swiss-Prot
Match: Q8H2X8 (Protein SHORT-ROOT 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SHR1 PE=1 SV=2)

HSP 1 Score: 411.8 bits (1057), Expect = 1.2e-113
Identity = 257/606 (42.41%), Postives = 353/606 (58.25%), Query Frame = 0


Query: 1   MDTLLRLVNDLGSSDQY-------SYNNNSSSSSKNSSDRNHYN---------------- 60
           MDTL RLV+   +S+Q        SYN+ S++SS + S  +  N                
Sbjct: 1   MDTLFRLVSLQAASEQQQQQQQSASYNSRSTTSSGSRSSSHQTNASYSYYHHSSNSGGGG 60

Query: 61  -----------------YYLQNPQSQECFN---NSFMEDEDHFSASSSSSHHHHH---QL 120
                            YY   P  +EC N   +    DED FS+SSSS H HH    Q 
Sbjct: 61  GGGGGYYYGGQQPPPSQYYYLEPYQEECGNAPHHQLYMDED-FSSSSSSRHFHHGARVQQ 120

Query: 121 RQLQCSTTTTSTTST-VVGLMAKLLYLDDGLSAAAPVDH--DLNFELSE----------- 180
           +Q   S+T T T  T  +   +       GL  AA +    DLN + S            
Sbjct: 121 QQPPASSTPTGTAPTPPLSTSSTAAGAGHGLFEAADLSFPPDLNLDFSSPASSSGGGTAS 180

Query: 181 ----------EWASTVLLQTAIAIVNKNTTRIQHLMWVLNELGSPYGDIDQKLAFYFLQG 240
                      WAS +LL+ A ++  +++ R+Q LMW+LNEL SPYGD++QKLA YFLQG
Sbjct: 181 SGAVGGGGGGRWASQLLLECARSVAARDSQRVQQLMWMLNELASPYGDVEQKLASYFLQG 240

Query: 241 MFSRVTDSGAKCYRTLAAALEKQSCFGSMRRMVLKFEEVSPWMRFGHVASNGSLME---- 300
           +F+R+T SG +  RTLAAA ++ + F S RR  L+F+E+SPW  FGHVA+NG+++E    
Sbjct: 241 LFARLTASGPRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLE 300

Query: 301 ----ALRGEKKLHIIDIPGSYSSFCTQWPTFIEALATQS-DQTPHLTLTTLVAAKSEGTL 360
               A    ++ HI+D+    ++FCTQWPT +EALAT+S D+TPHL++TT+V+A      
Sbjct: 301 VAAAASSETQRFHILDLS---NTFCTQWPTLLEALATRSADETPHLSITTVVSAAPSAPT 360

Query: 361 RAHKKLMKEISRRLEKFARLMGISFKFKPIFHYGDVSHFDFTHLPLKH---DEAVAVNCS 420
            A +++M+EI +R+EKFARLMG+ F+F+ + H GD++  D   L L+      A+AVNC 
Sbjct: 361 AAVQRVMREIGQRMEKFARLMGVPFRFRAVHHSGDLAELDLDALDLREGGATTALAVNCV 420

Query: 421 GALRSVAP-LHNRRDFLISLFRSLRPKIITVVEEEADLNA----------DGGADD--FF 480
            +LR V P    RRD   +  R L P+++TVVEEEADL A          +GG  +  F 
Sbjct: 421 NSLRGVVPGRARRRDAFAASLRRLDPRVVTVVEEEADLVASDPDASSATEEGGDTEAAFL 480

Query: 481 KHLQECLRWFRLYFDSLDGSFPIVTDERLMLERAAGRSVVDLLACGLAESVERRETAVRW 508
           K   E LR+F  Y DSL+ SFP  ++ERL LER AGR++VDL++C  +ES+ERRETA  W
Sbjct: 481 KVFGEGLRFFSAYMDSLEESFPKTSNERLALERGAGRAIVDLVSCPASESMERRETAASW 540

[Close]

BLAST of MELO3C020907 vs. ExPASy Swiss-Prot
Match: A2XIA8 (Protein SHORT-ROOT 2 OS=Oryza sativa subsp. indica OX=39946 GN=SHR2 PE=3 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 1.4e-106
Identity = 243/563 (43.16%), Postives = 328/563 (58.26%), Query Frame = 0


Query: 17  YSYNNNSSSSSKNSSDRNHY----------NYYLQNPQS----QECFN-NSFMEDEDHFS 76
           ++Y ++S S   N+S+ N+Y           YY +  Q     +EC N + F  DED FS
Sbjct: 50  HTYYHHSHSHYNNNSNTNYYYQGGGGGGGGYYYAEEQQPAAYLEECGNGHQFYMDED-FS 109

Query: 77  ASSSSSHHHHHQLRQLQC------STTTTSTTSTVVGLMAKLLY------LDDGLSAAAP 136
           +SSSS   H               S TT+S     +   A   +      LD G S A P
Sbjct: 110 SSSSSRQFHSGTGAPSSAPVPPPPSATTSSAGGHGLFEAADFSFPQVDISLDFGGSPAVP 169

Query: 137 VDHDLNF------ELSEEWASTVLLQTAIAIVNKNTTRIQHLMWVLNELGSPYGDIDQKL 196
                          S  WA+ +L++ A A+  +++ R+Q LMW+LNEL SPYGD+DQKL
Sbjct: 170 SSSGAGAGAGAAPSSSGRWAAQLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKL 229

Query: 197 AFYFLQGMFSRVTDSGAKCYRTLAAALEKQSCFGSMRRMVLKFEEVSPWMRFGHVASNGS 256
           A YFLQG+F+R+T SG +  RTLA A ++ + F S RR  LKF+E+SPW  FGHVA+NG+
Sbjct: 230 ASYFLQGLFARLTTSGPRTLRTLATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGA 289

Query: 257 LMEAL-------------------RGEKKLHIIDIPGSYSSFCTQWPTFIEALATQ-SDQ 316
           ++E+                        +LHI+D+    ++FCTQWPT +EALAT+ SD 
Sbjct: 290 ILESFLEAAAAGAAAASSSSSSSSTPPTRLHILDLS---NTFCTQWPTLLEALATRSSDD 349

Query: 317 TPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFARLMGISFKFKPIFHYGDVSHFDFT 376
           TPHL++TT+V   +     A +++M+EI +RLEKFARLMG+ F F+ + H GD++  D  
Sbjct: 350 TPHLSITTVVPTAAPSA--AAQRVMREIGQRLEKFARLMGVPFSFRAVHHAGDLADLDLA 409

Query: 377 HLPLKH---DEAVAVNCSGALRSVAPLHNRRDFLISLFRSLRPKIITVVEEEADL----- 436
            L L+      A+AVNC  ALR VA     RD  ++  R L P+++TVVEEEADL     
Sbjct: 410 ALDLREGGATAALAVNCVNALRGVA---RGRDAFVASLRRLEPRVVTVVEEEADLAAPEA 469

Query: 437 NADGGADD---FFKHLQECLRWFRLYFDSLDGSFPIVTDERLMLERAAGRSVVDLLACGL 496
           +A   AD    F K   E LR+F  Y DSL+ SFP  ++ERL LERA GR++VDL++C  
Sbjct: 470 DASSEADTDAAFVKVFGEGLRFFSAYMDSLEESFPKTSNERLSLERAVGRAIVDLVSCPA 529

Query: 497 AESVERRETAVRWTRRLHDGGFKPVSFSEDVNDDVRALLRRYKDGWTVMDGDG------- 508
           ++S ERRETA  W RR+   GF P +FSEDV DDVR+LLRRYK+GW++ D  G       
Sbjct: 530 SQSAERRETAASWARRMRSAGFSPAAFSEDVADDVRSLLRRYKEGWSMRDAGGATDDAAG 589

[Close]

BLAST of MELO3C020907 vs. ExPASy Swiss-Prot
Match: Q75I13 (Protein SHORT-ROOT 2 OS=Oryza sativa subsp. japonica OX=39947 GN=SHR2 PE=1 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 1.4e-106
Identity = 243/563 (43.16%), Postives = 328/563 (58.26%), Query Frame = 0


Query: 17  YSYNNNSSSSSKNSSDRNHY----------NYYLQNPQS----QECFN-NSFMEDEDHFS 76
           ++Y ++S S   N+S+ N+Y           YY +  Q     +EC N + F  DED FS
Sbjct: 50  HTYYHHSHSHYNNNSNTNYYYQGGGGGGGGYYYAEEQQPAAYLEECGNGHQFYMDED-FS 109

Query: 77  ASSSSSHHHHHQLRQLQC------STTTTSTTSTVVGLMAKLLY------LDDGLSAAAP 136
           +SSSS   H               S TT+S     +   A   +      LD G S A P
Sbjct: 110 SSSSSRQFHSGTGAPSSAPVPPPPSATTSSAGGHGLFEAADFSFPQVDISLDFGGSPAVP 169

Query: 137 VDHDLNF------ELSEEWASTVLLQTAIAIVNKNTTRIQHLMWVLNELGSPYGDIDQKL 196
                          S  WA+ +L++ A A+  +++ R+Q LMW+LNEL SPYGD+DQKL
Sbjct: 170 SSSGAGAGAGAAPSSSGRWAAQLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKL 229

Query: 197 AFYFLQGMFSRVTDSGAKCYRTLAAALEKQSCFGSMRRMVLKFEEVSPWMRFGHVASNGS 256
           A YFLQG+F+R+T SG +  RTLA A ++ + F S RR  LKF+E+SPW  FGHVA+NG+
Sbjct: 230 ASYFLQGLFARLTTSGPRTLRTLATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGA 289

Query: 257 LMEAL-------------------RGEKKLHIIDIPGSYSSFCTQWPTFIEALATQ-SDQ 316
           ++E+                        +LHI+D+    ++FCTQWPT +EALAT+ SD 
Sbjct: 290 ILESFLEAAAAGAAASSSSSSSSSTPPTRLHILDLS---NTFCTQWPTLLEALATRSSDD 349

Query: 317 TPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFARLMGISFKFKPIFHYGDVSHFDFT 376
           TPHL++TT+V   +     A +++M+EI +RLEKFARLMG+ F F+ + H GD++  D  
Sbjct: 350 TPHLSITTVVPTAAPSA--AAQRVMREIGQRLEKFARLMGVPFSFRAVHHSGDLADLDLA 409

Query: 377 HLPLKH---DEAVAVNCSGALRSVAPLHNRRDFLISLFRSLRPKIITVVEEEADL----- 436
            L L+      A+AVNC  ALR VA     RD  ++  R L P+++TVVEEEADL     
Sbjct: 410 ALDLREGGATAALAVNCVNALRGVA---RGRDAFVASLRRLEPRVVTVVEEEADLAAPEA 469

Query: 437 NADGGADD---FFKHLQECLRWFRLYFDSLDGSFPIVTDERLMLERAAGRSVVDLLACGL 496
           +A   AD    F K   E LR+F  Y DSL+ SFP  ++ERL LERA GR++VDL++C  
Sbjct: 470 DASSEADTDAAFVKVFGEGLRFFSAYMDSLEESFPKTSNERLSLERAVGRAIVDLVSCPA 529

Query: 497 AESVERRETAVRWTRRLHDGGFKPVSFSEDVNDDVRALLRRYKDGWTVMDGDG------- 508
           ++S ERRETA  W RR+   GF P +FSEDV DDVR+LLRRYK+GW++ D  G       
Sbjct: 530 SQSAERRETAASWARRMRSAGFSPAAFSEDVADDVRSLLRRYKEGWSMRDAGGATDDAAG 589

[Close]

BLAST of MELO3C020907 vs. ExPASy TrEMBL
Match: A0A1S3C604 (protein SHORT-ROOT-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497427 PE=3 SV=1)

HSP 1 Score: 998.8 bits (2581), Expect = 8.3e-288
Identity = 501/517 (96.91%), Postives = 501/517 (96.91%), Query Frame = 0


Query: 1   MDTLLRLVNDLGSSDQYSYNNNSSSSSKNSSDRNHYNYYLQNPQSQECFNNSFMEDEDHF 60
           MDTLLRLVNDLGSSDQYSYNNNSSSSSKNSSDRNHYNYYLQNPQSQECFNNSFMEDEDHF
Sbjct: 1   MDTLLRLVNDLGSSDQYSYNNNSSSSSKNSSDRNHYNYYLQNPQSQECFNNSFMEDEDHF 60

Query: 61  SASSSSSHHHHHQLRQLQCSTTTTSTTSTVVGLMAKLLYLDDGLSAAAPVDHDLNFELSE 120
           SASSSSSHHHHHQLRQLQCSTTTTSTTST                AAAPVDHDLNFELSE
Sbjct: 61  SASSSSSHHHHHQLRQLQCSTTTTSTTST---------------GAAAPVDHDLNFELSE 120

Query: 121 EWASTVLLQTAIAIVNKNTTRIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSGA 180
           EWASTVLLQTAIAIVNKNTTRIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSGA
Sbjct: 121 EWASTVLLQTAIAIVNKNTTRIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSGA 180

Query: 181 KCYRTLAAALEKQSCFGSMRRMVLKFEEVSPWMRFGHVASNGSLMEALRGEKKLHIIDIP 240
           KCYRTLAAALEKQSCFGSMRRMVLKFEEVSPWMRFGHVASNGSLMEALRGEKKLHIIDIP
Sbjct: 181 KCYRTLAAALEKQSCFGSMRRMVLKFEEVSPWMRFGHVASNGSLMEALRGEKKLHIIDIP 240

Query: 241 GSYSSFCTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFAR 300
           GSYSSFCTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFAR
Sbjct: 241 GSYSSFCTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFAR 300

Query: 301 LMGISFKFKPIFHYGDVSHFDFTHLPLKHDEAVAVNCSGALRSVAPLHNRRDFLISLFRS 360
           LMGISFKFKPIFHYGDVSHFDFTHLPLKHDEAVAVNCSGALRSVAPLHNRRDFLISLFRS
Sbjct: 301 LMGISFKFKPIFHYGDVSHFDFTHLPLKHDEAVAVNCSGALRSVAPLHNRRDFLISLFRS 360

Query: 361 LRPKIITVVEEEADLNADGGADDFFKHLQECLRWFRLYFDSLDGSFPIVTDERLMLERAA 420
           LRPKIITVVEEEADLNADGGADDFFKHLQECLRWFRLYFDSLDGSFPIVTDERLMLERAA
Sbjct: 361 LRPKIITVVEEEADLNADGGADDFFKHLQECLRWFRLYFDSLDGSFPIVTDERLMLERAA 420

Query: 421 GRSVVDLLACGLAESVERRETAVRWTRRLHDGGFKPVSFSEDVNDDVRALLRRYKDGWTV 480
           GRSVVDLLACGLAESVERRETAVRWTRRLHDGGFKPVSFSEDVNDDVRALLRRYKDGWTV
Sbjct: 421 GRSVVDLLACGLAESVERRETAVRWTRRLHDGGFKPVSFSEDVNDDVRALLRRYKDGWTV 480

Query: 481 MDGDGAGAGMFLAWKGQPVVWAAAWVPGQVDGEKTHV 518
           MDGDGAGAGMFLAWKGQPVVWAAAWVPGQVDGEKTHV
Sbjct: 481 MDGDGAGAGMFLAWKGQPVVWAAAWVPGQVDGEKTHV 502

[Close]

BLAST of MELO3C020907 vs. ExPASy TrEMBL
Match: A0A5A7TWR4 (Protein SHORT-ROOT-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00080 PE=3 SV=1)

HSP 1 Score: 998.8 bits (2581), Expect = 8.3e-288
Identity = 501/517 (96.91%), Postives = 501/517 (96.91%), Query Frame = 0


Query: 1   MDTLLRLVNDLGSSDQYSYNNNSSSSSKNSSDRNHYNYYLQNPQSQECFNNSFMEDEDHF 60
           MDTLLRLVNDLGSSDQYSYNNNSSSSSKNSSDRNHYNYYLQNPQSQECFNNSFMEDEDHF
Sbjct: 1   MDTLLRLVNDLGSSDQYSYNNNSSSSSKNSSDRNHYNYYLQNPQSQECFNNSFMEDEDHF 60

Query: 61  SASSSSSHHHHHQLRQLQCSTTTTSTTSTVVGLMAKLLYLDDGLSAAAPVDHDLNFELSE 120
           SASSSSSHHHHHQLRQLQCSTTTTSTTST                AAAPVDHDLNFELSE
Sbjct: 61  SASSSSSHHHHHQLRQLQCSTTTTSTTST---------------GAAAPVDHDLNFELSE 120

Query: 121 EWASTVLLQTAIAIVNKNTTRIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSGA 180
           EWASTVLLQTAIAIVNKNTTRIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSGA
Sbjct: 121 EWASTVLLQTAIAIVNKNTTRIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSGA 180

Query: 181 KCYRTLAAALEKQSCFGSMRRMVLKFEEVSPWMRFGHVASNGSLMEALRGEKKLHIIDIP 240
           KCYRTLAAALEKQSCFGSMRRMVLKFEEVSPWMRFGHVASNGSLMEALRGEKKLHIIDIP
Sbjct: 181 KCYRTLAAALEKQSCFGSMRRMVLKFEEVSPWMRFGHVASNGSLMEALRGEKKLHIIDIP 240

Query: 241 GSYSSFCTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFAR 300
           GSYSSFCTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFAR
Sbjct: 241 GSYSSFCTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFAR 300

Query: 301 LMGISFKFKPIFHYGDVSHFDFTHLPLKHDEAVAVNCSGALRSVAPLHNRRDFLISLFRS 360
           LMGISFKFKPIFHYGDVSHFDFTHLPLKHDEAVAVNCSGALRSVAPLHNRRDFLISLFRS
Sbjct: 301 LMGISFKFKPIFHYGDVSHFDFTHLPLKHDEAVAVNCSGALRSVAPLHNRRDFLISLFRS 360

Query: 361 LRPKIITVVEEEADLNADGGADDFFKHLQECLRWFRLYFDSLDGSFPIVTDERLMLERAA 420
           LRPKIITVVEEEADLNADGGADDFFKHLQECLRWFRLYFDSLDGSFPIVTDERLMLERAA
Sbjct: 361 LRPKIITVVEEEADLNADGGADDFFKHLQECLRWFRLYFDSLDGSFPIVTDERLMLERAA 420

Query: 421 GRSVVDLLACGLAESVERRETAVRWTRRLHDGGFKPVSFSEDVNDDVRALLRRYKDGWTV 480
           GRSVVDLLACGLAESVERRETAVRWTRRLHDGGFKPVSFSEDVNDDVRALLRRYKDGWTV
Sbjct: 421 GRSVVDLLACGLAESVERRETAVRWTRRLHDGGFKPVSFSEDVNDDVRALLRRYKDGWTV 480

Query: 481 MDGDGAGAGMFLAWKGQPVVWAAAWVPGQVDGEKTHV 518
           MDGDGAGAGMFLAWKGQPVVWAAAWVPGQVDGEKTHV
Sbjct: 481 MDGDGAGAGMFLAWKGQPVVWAAAWVPGQVDGEKTHV 502

[Close]

BLAST of MELO3C020907 vs. ExPASy TrEMBL
Match: A0A1S4E1P8 (protein SHORT-ROOT-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497427 PE=3 SV=1)

HSP 1 Score: 990.3 bits (2559), Expect = 3.0e-285
Identity = 497/517 (96.13%), Postives = 497/517 (96.13%), Query Frame = 0


Query: 1   MDTLLRLVNDLGSSDQYSYNNNSSSSSKNSSDRNHYNYYLQNPQSQECFNNSFMEDEDHF 60
           MDTLLRLVNDLGSSDQYSYNNNSSSSSKNSSDRNHYNYYLQNPQSQECFNNSFMEDEDHF
Sbjct: 1   MDTLLRLVNDLGSSDQYSYNNNSSSSSKNSSDRNHYNYYLQNPQSQECFNNSFMEDEDHF 60

Query: 61  SASSSSSHHHHHQLRQLQCSTTTTSTTSTVVGLMAKLLYLDDGLSAAAPVDHDLNFELSE 120
           SASSSSSHHHHHQLRQLQCSTTTT                    SAAAPVDHDLNFELSE
Sbjct: 61  SASSSSSHHHHHQLRQLQCSTTTT--------------------SAAAPVDHDLNFELSE 120

Query: 121 EWASTVLLQTAIAIVNKNTTRIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSGA 180
           EWASTVLLQTAIAIVNKNTTRIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSGA
Sbjct: 121 EWASTVLLQTAIAIVNKNTTRIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSGA 180

Query: 181 KCYRTLAAALEKQSCFGSMRRMVLKFEEVSPWMRFGHVASNGSLMEALRGEKKLHIIDIP 240
           KCYRTLAAALEKQSCFGSMRRMVLKFEEVSPWMRFGHVASNGSLMEALRGEKKLHIIDIP
Sbjct: 181 KCYRTLAAALEKQSCFGSMRRMVLKFEEVSPWMRFGHVASNGSLMEALRGEKKLHIIDIP 240

Query: 241 GSYSSFCTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFAR 300
           GSYSSFCTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFAR
Sbjct: 241 GSYSSFCTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFAR 300

Query: 301 LMGISFKFKPIFHYGDVSHFDFTHLPLKHDEAVAVNCSGALRSVAPLHNRRDFLISLFRS 360
           LMGISFKFKPIFHYGDVSHFDFTHLPLKHDEAVAVNCSGALRSVAPLHNRRDFLISLFRS
Sbjct: 301 LMGISFKFKPIFHYGDVSHFDFTHLPLKHDEAVAVNCSGALRSVAPLHNRRDFLISLFRS 360

Query: 361 LRPKIITVVEEEADLNADGGADDFFKHLQECLRWFRLYFDSLDGSFPIVTDERLMLERAA 420
           LRPKIITVVEEEADLNADGGADDFFKHLQECLRWFRLYFDSLDGSFPIVTDERLMLERAA
Sbjct: 361 LRPKIITVVEEEADLNADGGADDFFKHLQECLRWFRLYFDSLDGSFPIVTDERLMLERAA 420

Query: 421 GRSVVDLLACGLAESVERRETAVRWTRRLHDGGFKPVSFSEDVNDDVRALLRRYKDGWTV 480
           GRSVVDLLACGLAESVERRETAVRWTRRLHDGGFKPVSFSEDVNDDVRALLRRYKDGWTV
Sbjct: 421 GRSVVDLLACGLAESVERRETAVRWTRRLHDGGFKPVSFSEDVNDDVRALLRRYKDGWTV 480

Query: 481 MDGDGAGAGMFLAWKGQPVVWAAAWVPGQVDGEKTHV 518
           MDGDGAGAGMFLAWKGQPVVWAAAWVPGQVDGEKTHV
Sbjct: 481 MDGDGAGAGMFLAWKGQPVVWAAAWVPGQVDGEKTHV 497

[Close]

BLAST of MELO3C020907 vs. ExPASy TrEMBL
Match: A0A0A0LLY3 (GRAS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G285340 PE=3 SV=1)

HSP 1 Score: 931.4 bits (2406), Expect = 1.6e-267
Identity = 473/518 (91.31%), Postives = 483/518 (93.24%), Query Frame = 0


Query: 1   MDTLLRLVND-LGSSDQYSYNNNSSSSSKNSSDRNHYNYYLQNPQSQECFNNSFMEDEDH 60
           MDTLLRLVND L SSDQYSYNNNSSSSSKNSSD+NHYN+YLQNPQSQECFNN FMEDEDH
Sbjct: 1   MDTLLRLVNDRLESSDQYSYNNNSSSSSKNSSDQNHYNFYLQNPQSQECFNNLFMEDEDH 60

Query: 61  FSASSSSSHHHHHQLRQLQCSTTTTSTTSTVVGLMAKLLYLDDGLSAAAPVDHDLNFELS 120
           FSASSSSSHHHHHQLRQLQCSTTTTSTTST V                APVD D NF+LS
Sbjct: 61  FSASSSSSHHHHHQLRQLQCSTTTTSTTSTGV---------------VAPVDQDPNFDLS 120

Query: 121 EEWASTVLLQTAIAIVNKNTTRIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSG 180
           EEWAST+LLQTAIAIVN NT RIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSG
Sbjct: 121 EEWASTILLQTAIAIVNNNTPRIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSG 180

Query: 181 AKCYRTLAAALEKQSCFGSMRRMVLKFEEVSPWMRFGHVASNGSLMEALRGEKKLHIIDI 240
           AKCY TLAAALEKQSCF SMRRMVLKFEEVSPWMRFG+VASNGSLMEAL+GEKKLHIIDI
Sbjct: 181 AKCYGTLAAALEKQSCFESMRRMVLKFEEVSPWMRFGYVASNGSLMEALQGEKKLHIIDI 240

Query: 241 PGSYSSFCTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFA 300
            GSYSSFCTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFA
Sbjct: 241 AGSYSSFCTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFA 300

Query: 301 RLMGISFKFKPIFHYGDVSHFDFTHLPLKHDEAVAVNCSGALRSVAPLHNRRDFLISLFR 360
           RLMGI FKFKPIFHYGDVSHFDFT+LPLKHDEAVAVNCSGALRSVAPL NRRDFLISLFR
Sbjct: 301 RLMGIPFKFKPIFHYGDVSHFDFTNLPLKHDEAVAVNCSGALRSVAPLQNRRDFLISLFR 360

Query: 361 SLRPKIITVVEEEADLNADGGADDFFKHLQECLRWFRLYFDSLDGSFPIVTDERLMLERA 420
           SLRPKIITVVEEEADLNA GGADDF KHLQECLRWFRLYFDSLDGSFP+VTDERLMLERA
Sbjct: 361 SLRPKIITVVEEEADLNAHGGADDFVKHLQECLRWFRLYFDSLDGSFPVVTDERLMLERA 420

Query: 421 AGRSVVDLLACGLAESVERRETAVRWTRRLHDGGFKPVSFSEDVNDDVRALLRRYKDGWT 480
           AGR+VVDLLA GLAESVERRETA RW RR+HDGGFKPVSFSEDVNDDVRALLRRYKDGWT
Sbjct: 421 AGRAVVDLLARGLAESVERRETAARWVRRMHDGGFKPVSFSEDVNDDVRALLRRYKDGWT 480

Query: 481 VMDGDGAGAGMFLAWKGQPVVWAAAWVPGQVDGEKTHV 518
           VMDGDGAGAGMFLAWKGQPVVWAAAWVPGQVDGEKT V
Sbjct: 481 VMDGDGAGAGMFLAWKGQPVVWAAAWVPGQVDGEKTPV 503

[Close]

BLAST of MELO3C020907 vs. ExPASy TrEMBL
Match: A0A6J1L1R5 (protein SHORT-ROOT-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499621 PE=3 SV=1)

HSP 1 Score: 626.7 bits (1615), Expect = 8.6e-176
Identity = 336/521 (64.49%), Postives = 402/521 (77.16%), Query Frame = 0


Query: 1   MDTLLRLVNDLGSSDQYSYNNNSSSSSKNSSD-RNHYNYYLQNPQSQECFNNSFMEDEDH 60
           MDTL RLV++L  SDQ SY  NSS+SSKNS D +NH   +L  P  ++CF +SFM D+ H
Sbjct: 23  MDTLFRLVSNLQPSDQ-SY--NSSTSSKNSVDLQNH--CFLNPPPPEQCFTSSFMVDQPH 82

Query: 61  FSASSSSSHH----HHHQLRQLQCSTTTTSTTSTVVGLMAKLLYLDDGLSAAAPVDHDLN 120
           FSASSSS+H     H HQ  +   +  +T                       AP+  D+N
Sbjct: 83  FSASSSSNHRPDKDHVHQDHEYISTINSTDRW-------------------FAPL--DVN 142

Query: 121 FELSEEWASTVLLQTAIAIVNKNTTRIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRV 180
            E S  WAST+++QTAIAIV+ N ++IQ LMW+LNELGSPYGDIDQKLAFYFL+ MFS V
Sbjct: 143 LEFSNGWASTLIVQTAIAIVDNNASQIQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHV 202

Query: 181 TDSGAKCYRTLAAALEKQSCFGSMRRMVLKFEEVSPWMRFGHVASNGSLMEALRGEKKLH 240
           T+SG +CY+TLA   EK+SCF SMRRMVLKF+EVSPWM FGHVASNG +MEA  GEKKLH
Sbjct: 203 TNSGERCYQTLAMVSEKRSCFASMRRMVLKFQEVSPWMTFGHVASNGVIMEAFEGEKKLH 262

Query: 241 IIDIPGSYSSFCTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRL 300
           IIDI    +SFCTQWPTF+EALA++SD+TPHL LTTLV A+S+      KK+M+EISRR+
Sbjct: 263 IIDIS---NSFCTQWPTFLEALASRSDETPHLRLTTLVVARSD------KKMMREISRRM 322

Query: 301 EKFARLMGISFKFKPIFHYGDVSHFDFTHLPLKHDEAVAVNCSGALRSVAPLHNRRDFLI 360
           EKFARLMG+ FKFK I++ GD+S  +FT L +  DEA+A+NC GA RSV P+ NRRDFLI
Sbjct: 323 EKFARLMGVPFKFKAIYYSGDISQLNFTELGVNDDEALAINCVGAFRSVTPVDNRRDFLI 382

Query: 361 SLFRSLRPKIITVVEEEADLNADGGADDFFKHLQECLRWFRLYFDSLDGSFPIVTDERLM 420
           SLF +LRP+IITVVEE+ADL++DG   DF K +QECLRWFR+YFDSLDGSFP  +DE+LM
Sbjct: 383 SLFGALRPRIITVVEEQADLDSDG--VDFVKDVQECLRWFRVYFDSLDGSFPSTSDEKLM 442

Query: 421 LERAAGRSVVDLLACGLAESVERRETAVRWTRRLHDGGFKPVSFSEDVNDDVRALLRRYK 480
           LERAAGR++VDLLA   AE VERRETA RW RRLH+GGFKPVSFSEDVNDDVRALLR+YK
Sbjct: 443 LERAAGRAIVDLLARAPAECVERRETAARWARRLHEGGFKPVSFSEDVNDDVRALLRKYK 502

Query: 481 DGWTVM-DGDGAGAGMFLAWKGQPVVWAAAWVPGQVDGEKT 516
           DGWTV+ DG+GA AG+FLAWKGQ VVWAAAW P  +DGEK+
Sbjct: 503 DGWTVLDDGEGADAGIFLAWKGQAVVWAAAWTPEPLDGEKS 506

[Close]

BLAST of MELO3C020907 vs. TAIR 10
Match: AT4G37650.1 (GRAS family transcription factor )

HSP 1 Score: 465.3 bits (1196), Expect = 6.4e-131
Identity = 266/536 (49.63%), Postives = 349/536 (65.11%), Query Frame = 0


Query: 1   MDTLLRLVNDLGSSDQYSYNNNSSSSSKNSSDRN-------HYNYYLQNPQSQECFNNSF 60
           MDTL RLV+        S   N SS S+ S+          HYN + QN   +ECF N F
Sbjct: 1   MDTLFRLVSLQQQQQSDSIITNQSSLSRTSTTTTGSPQTAYHYN-FPQNDVVEECF-NFF 60

Query: 61  MEDEDHFSASSSSSHHHHHQLRQLQCSTTT-------TSTTSTVVGLMAKLL-------- 120
           M++ED  S+SS  +HH+H+         TT       TS+T +     A L         
Sbjct: 61  MDEEDLSSSSSHHNHHNHNNPNTYYSPFTTPTQYHPATSSTPSSTAAAAALASPYSSSGH 120

Query: 121 YLDDGLSAAAPVDHDLNFELSEEWASTVLLQTAIAIVNKNTTRIQHLMWVLNELGSPYGD 180
           + D    +        +F  + +WA +VLL+ A A  +K+T R Q ++W LNEL SPYGD
Sbjct: 121 HNDPSAFSIPQTPPSFDFSANAKWADSVLLEAARAFSDKDTARAQQILWTLNELSSPYGD 180

Query: 181 IDQKLAFYFLQGMFSRVTDSGAKCYRTL--AAALEKQSCFGSMRRMVLKFEEVSPWMRFG 240
            +QKLA YFLQ +F+R+T SG +CYRT+  AAA EK   F S R+ VLKF+EVSPW  FG
Sbjct: 181 TEQKLASYFLQALFNRMTGSGERCYRTMVTAAATEKTCSFESTRKTVLKFQEVSPWATFG 240

Query: 241 HVASNGSLMEALRGEKKLHIIDIPGSYSSFCTQWPTFIEALATQSDQTPHLTLTTLVAA- 300
           HVA+NG+++EA+ GE K+HI+DI    S+FCTQWPT +EALAT+SD TPHL LTT+V A 
Sbjct: 241 HVAANGAILEAVDGEAKIHIVDIS---STFCTQWPTLLEALATRSDDTPHLRLTTVVVAN 300

Query: 301 KSEGTLRAHKKLMKEISRRLEKFARLMGISFKFKPIFHYGDVSHFDFTHLPLKHDEAVAV 360
           K      A  ++MKEI  R+EKFARLMG+ FKF  I H GD+S FD   L +K DE +A+
Sbjct: 301 KFVNDQTASHRMMKEIGNRMEKFARLMGVPFKFNIIHHVGDLSEFDLNELDVKPDEVLAI 360

Query: 361 NCSGALRSVAPLHNRRDFLISLFRSLRPKIITVVEEEADL--NADGGADD-FFKHLQECL 420
           NC GA+  +A   + RD +IS FR LRP+I+TVVEEEADL    +GG DD F +   ECL
Sbjct: 361 NCVGAMHGIASRGSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECL 420

Query: 421 RWFRLYFDSLDGSFPIVTDERLMLERAAGRSVVDLLACGLAESVERRETAVRWTRRLHDG 480
           RWFR+ F+S + SFP  ++ERLMLERAAGR++VDL+AC  ++S ERRETA +W+RR+ + 
Sbjct: 421 RWFRVCFESWEESFPRTSNERLMLERAAGRAIVDLVACEPSDSTERRETARKWSRRMRNS 480

Query: 481 GFKPVSFSEDVNDDVRALLRRYKDG-WTVMDGDGAGAGMFLAWKGQPVVWAAAWVP 508
           GF  V +S++V DDVRALLRRYK+G W+++    A AG+FL W+ QPVVWA+AW P
Sbjct: 481 GFGAVGYSDEVADDVRALLRRYKEGVWSMVQCPDA-AGIFLCWRDQPVVWASAWRP 530

[Close]

BLAST of MELO3C020907 vs. TAIR 10
Match: AT2G04890.1 (SCARECROW-like 21 )

HSP 1 Score: 175.6 bits (444), Expect = 1.0e-43
Identity = 112/385 (29.09%), Postives = 197/385 (51.17%), Query Frame = 0


Query: 126 VLLQTAIAIVNKNTTRIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSGAKCYRT 185
           VL+  A A+   N    +  M  L  + S  G+  Q+L  Y L+G+ +R+  SG+  Y++
Sbjct: 53  VLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSSIYKS 112

Query: 186 LAAALEKQSCFGSMRRMVLKFEEVSPWMRFGHVASNGSLMEALRGEKKLHIIDIPGSYSS 245
           L +   +   F S    V    EV P+ +FG++++NG++ EA++ E+++HIID      S
Sbjct: 113 LQSREPESYEFLS---YVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQGS 172

Query: 246 FCTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFARLMGIS 305
              QW   I+A A +    P++ +T +     +G+      ++  + +RLEK A+   + 
Sbjct: 173 ---QWIALIQAFAARPGGAPNIRITGV----GDGS------VLVTVKKRLEKLAKKFDVP 232

Query: 306 FKFKPIFHYGDVSHFDFTHLPLKHDEAVAVNCSGALRSV----APLHNRRDFLISLFRSL 365
           F+F  +         +  +L ++  EA+ VN +  L  +      + N RD L+ + +SL
Sbjct: 233 FRFNAVSR--PSCEVEVENLDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSL 292

Query: 366 RPKIITVVEEEADLNADGGADDFFKHLQECLRWFRLYFDSLDGSFPIVTDERLMLER-AA 425
            PK++T+VE+E + N       F     E L ++   F+S+D   P    ER+ +E+   
Sbjct: 293 SPKVVTLVEQECNTN----TSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCM 352

Query: 426 GRSVVDLLACGLAESVERRETAVRWTRRLHDGGFKPVSFSEDVNDDVRALLRRYKDGWTV 485
            R VV+++AC  AE +ER E   +W  R    GF+P   S  ++  +RALLR Y +G+ +
Sbjct: 353 ARDVVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYSNGYAI 412

Query: 486 MDGDGAGAGMFLAWKGQPVVWAAAW 506
            + DGA   ++L W  + +V + AW
Sbjct: 413 EERDGA---LYLGWMDRILVSSCAW 412

[Close]

BLAST of MELO3C020907 vs. TAIR 10
Match: AT5G48150.1 (GRAS family transcription factor )

HSP 1 Score: 168.7 bits (426), Expect = 1.2e-41
Identity = 111/384 (28.91%), Postives = 192/384 (50.00%), Query Frame = 0


Query: 127 LLQTAIAIVNKNTTRIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSGAKCYRTL 186
           L+  A A+   +      +M  L ++ S  G+  Q+L  Y L+G+ +++  SG+  Y+ L
Sbjct: 123 LVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKAL 182

Query: 187 AAALEKQSCFGSMRRMVLKFEEVSPWMRFGHVASNGSLMEALRGEKKLHIIDIPGSYSSF 246
               E  S    +   +    EV P+ +FG++++NG++ EA++ E ++HIID      S 
Sbjct: 183 NRCPEPAST--ELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGS- 242

Query: 247 CTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFARLMGISF 306
             QW T I+A A +    P + +T +    S     A    +  +  RL K A+   + F
Sbjct: 243 --QWVTLIQAFAARPGGPPRIRITGIDDMTS---AYARGGGLSIVGNRLAKLAKQFNVPF 302

Query: 307 KFKPIFHYGDVSHFDFTHLPLKHDEAVAVNCSGALRSV----APLHNRRDFLISLFRSLR 366
           +F  +     VS     +L ++  EA+AVN +  L  +        N RD L+ + +SL 
Sbjct: 303 EFNSV--SVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLS 362

Query: 367 PKIITVVEEEADLNADGGADDFFKHLQECLRWFRLYFDSLDGSFPIVTDERLMLER-AAG 426
           PK++T+VE+E++ N       FF    E + ++   F+S+D + P    +R+ +E+    
Sbjct: 363 PKVVTLVEQESNTNTAA----FFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLA 422

Query: 427 RSVVDLLACGLAESVERRETAVRWTRRLHDGGFKPVSFSEDVNDDVRALLRRYKDGWTVM 486
           R VV+++AC  A+ VER E   +W  R    GF P   S  VN  +++LLR Y D + + 
Sbjct: 423 RDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSDKYRLE 482

Query: 487 DGDGAGAGMFLAWKGQPVVWAAAW 506
           + DGA   ++L W  + +V + AW
Sbjct: 483 ERDGA---LYLGWMHRDLVASCAW 489

[Close]

BLAST of MELO3C020907 vs. TAIR 10
Match: AT5G48150.2 (GRAS family transcription factor )

HSP 1 Score: 168.7 bits (426), Expect = 1.2e-41
Identity = 111/384 (28.91%), Postives = 192/384 (50.00%), Query Frame = 0


Query: 127 LLQTAIAIVNKNTTRIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSGAKCYRTL 186
           L+  A A+   +      +M  L ++ S  G+  Q+L  Y L+G+ +++  SG+  Y+ L
Sbjct: 123 LVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKAL 182

Query: 187 AAALEKQSCFGSMRRMVLKFEEVSPWMRFGHVASNGSLMEALRGEKKLHIIDIPGSYSSF 246
               E  S    +   +    EV P+ +FG++++NG++ EA++ E ++HIID      S 
Sbjct: 183 NRCPEPAST--ELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGS- 242

Query: 247 CTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFARLMGISF 306
             QW T I+A A +    P + +T +    S     A    +  +  RL K A+   + F
Sbjct: 243 --QWVTLIQAFAARPGGPPRIRITGIDDMTS---AYARGGGLSIVGNRLAKLAKQFNVPF 302

Query: 307 KFKPIFHYGDVSHFDFTHLPLKHDEAVAVNCSGALRSV----APLHNRRDFLISLFRSLR 366
           +F  +     VS     +L ++  EA+AVN +  L  +        N RD L+ + +SL 
Sbjct: 303 EFNSV--SVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLS 362

Query: 367 PKIITVVEEEADLNADGGADDFFKHLQECLRWFRLYFDSLDGSFPIVTDERLMLER-AAG 426
           PK++T+VE+E++ N       FF    E + ++   F+S+D + P    +R+ +E+    
Sbjct: 363 PKVVTLVEQESNTNTAA----FFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLA 422

Query: 427 RSVVDLLACGLAESVERRETAVRWTRRLHDGGFKPVSFSEDVNDDVRALLRRYKDGWTVM 486
           R VV+++AC  A+ VER E   +W  R    GF P   S  VN  +++LLR Y D + + 
Sbjct: 423 RDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSDKYRLE 482

Query: 487 DGDGAGAGMFLAWKGQPVVWAAAW 506
           + DGA   ++L W  + +V + AW
Sbjct: 483 ERDGA---LYLGWMHRDLVASCAW 489

[Close]

BLAST of MELO3C020907 vs. TAIR 10
Match: AT1G21450.1 (SCARECROW-like 1 )

HSP 1 Score: 154.1 bits (388), Expect = 3.1e-37
Identity = 114/398 (28.64%), Postives = 200/398 (50.25%), Query Frame = 0


Query: 118 LSEEWASTVLLQTAIAIVNKNTTRIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTD 177
           +S+     +L+  A A+          ++  L ++ S  GD  Q++A Y ++G+ +R+  
Sbjct: 217 VSQATPKQILISCARALSEGKLEEALSMVNELRQIVSIQGDPSQRIAAYMVEGLAARMAA 276

Query: 178 SGAKCYRTLAAALEKQSCFGSMRRMVLKFEEVSPWMRFGHVASNGSLMEALRGEKKLHII 237
           SG   YR L    ++      +  M + F EV P  +FG +A+NG+++EA++GE+++HII
Sbjct: 277 SGKFIYRALKC--KEPPSDERLAAMQVLF-EVCPCFKFGFLAANGAILEAIKGEEEVHII 336

Query: 238 DIPGSYSSFCTQWPTFIEALATQSDQTPHLTLTTL----VAAKSEGTLRAHKKLMKEISR 297
           D   +  +   Q+ T I ++A    + P L LT +       +S G LR        I  
Sbjct: 337 DFDINQGN---QYMTLIRSIAELPGKRPRLRLTGIDDPESVQRSIGGLRI-------IGL 396

Query: 298 RLEKFARLMGISFKFKPIFHYGDVSHFDFTHLPLKHDEAVAVNCSGALRSV----APLHN 357
           RLE+ A   G+SFKFK +      S    + L  K  E + VN +  L  +        N
Sbjct: 397 RLEQLAEDNGVSFKFKAM--PSKTSIVSPSTLGCKPGETLIVNFAFQLHHMPDESVTTVN 456

Query: 358 RRDFLISLFRSLRPKIITVVEEEADLNADGGADDFFKHLQECLRWFRLYFDSLDGSFPIV 417
           +RD L+ + +SL PK++TVVE++ + N       FF    E   ++   F+SLD + P  
Sbjct: 457 QRDELLHMVKSLNPKLVTVVEQDVNTN----TSPFFPRFIEAYEYYSAVFESLDMTLPRE 516

Query: 418 TDERLMLER-AAGRSVVDLLACGLAESVERRETAVRWTRRLHDGGFKPVSFSEDVNDDVR 477
           + ER+ +ER    R +V+++AC   E +ER E A +W  R+   GF P   S  V ++++
Sbjct: 517 SQERMNVERQCLARDIVNIVACEGEERIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQ 576

Query: 478 ALLR-RYKDGWTVMDGDGAGAGMFLAWKGQPVVWAAAW 506
            L++ +Y + + + +  G    +   W+ + ++ A+AW
Sbjct: 577 NLIKQQYCNKYKLKEEMGE---LHFCWEEKSLIVASAW 592

The following BLAST results are available for this feature:

BLAST of MELO3C020907 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457838.1	1.7e-287	96.91	PREDICTED: protein SHORT-ROOT-like isoform X1 [Cucumis melo] >XP_008457842.1 PRE...	[more]
XP_016902151.1	6.1e-285	96.13	PREDICTED: protein SHORT-ROOT-like isoform X2 [Cucumis melo]	[more]
XP_031736993.1	3.4e-267	91.31	protein SHORT-ROOT isoform X3 [Cucumis sativus] >KGN61999.1 hypothetical protein...	[more]
XP_011649340.2	3.4e-267	91.31	protein SHORT-ROOT isoform X1 [Cucumis sativus]	[more]
XP_031736992.1	2.4e-265	91.12	protein SHORT-ROOT isoform X2 [Cucumis sativus]	[more]

BLAST of MELO3C020907 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZF7	8.9e-130	49.63	Protein SHORT-ROOT OS=Arabidopsis thaliana OX=3702 GN=SHR PE=1 SV=1	[more]
A2YN56	1.2e-113	42.41	Protein SHORT-ROOT 1 OS=Oryza sativa subsp. indica OX=39946 GN=SHR1 PE=3 SV=1	[more]
Q8H2X8	1.2e-113	42.41	Protein SHORT-ROOT 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SHR1 PE=1 SV=2	[more]
A2XIA8	1.4e-106	43.16	Protein SHORT-ROOT 2 OS=Oryza sativa subsp. indica OX=39946 GN=SHR2 PE=3 SV=1	[more]
Q75I13	1.4e-106	43.16	Protein SHORT-ROOT 2 OS=Oryza sativa subsp. japonica OX=39947 GN=SHR2 PE=1 SV=1	[more]

BLAST of MELO3C020907 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C604	8.3e-288	96.91	protein SHORT-ROOT-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497427 PE=3 ...	[more]
A0A5A7TWR4	8.3e-288	96.91	Protein SHORT-ROOT-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S4E1P8	3.0e-285	96.13	protein SHORT-ROOT-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497427 PE=3 ...	[more]
A0A0A0LLY3	1.6e-267	91.31	GRAS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G285340 PE=3 S...	[more]
A0A6J1L1R5	8.6e-176	64.49	protein SHORT-ROOT-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499621 P...	[more]

BLAST of MELO3C020907 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37650.1	6.4e-131	49.63	GRAS family transcription factor	[more]
AT2G04890.1	1.0e-43	29.09	SCARECROW-like 21	[more]
AT5G48150.1	1.2e-41	28.91	GRAS family transcription factor	[more]
AT5G48150.2	1.2e-41	28.91	GRAS family transcription factor	[more]
AT1G21450.1	3.1e-37	28.64	SCARECROW-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005202	Transcription factor GRAS	PFAM	PF03514	GRAS	coord: 125..505 e-value: 2.9E-88 score: 296.4
IPR005202	Transcription factor GRAS	PANTHER	PTHR31636	OSJNBA0084A10.13 PROTEIN-RELATED	coord: 1..506
IPR005202	Transcription factor GRAS	PROSITE	PS50985	GRAS	coord: 114..506 score: 60.455921
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..37
IPR030019	Protein short-root	PANTHER	PTHR31636:SF9	PROTEIN SHORT-ROOT	coord: 1..506

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C020907.1	MELO3C020907.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008356	asymmetric cell division
biological_process	GO:0048366	leaf development
biological_process	GO:0009956	radial pattern formation
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding