MELO3C020834 (gene) Melon (DHL92) v4

Overview


Name	MELO3C020834
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr11: 3705119 .. 3707674 (-)
RNA-Seq Expression	MELO3C020834
Synteny	MELO3C020834

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGTTGAAATTGATCGAAAAAAATAGTTTTAAAGAAACGAAAACCAAAACATTTGGTTACTTTTGTCAATCTACCATTTTATTTAAATAGTGTAGAAGTCGTGTCACGTATATATCCACCGGATCCGACGGTGGCGACGGCCGTTGCTGCCTCTGCTCGACGCAAGCCACCACATGAGTTCGCCCTGTTGTATTATCGTTGGTGCCGAAATCCTGATCTCCTGAGACGCTGGTTTGCATCTTCTAGGGCTTTTTTTATATATTATTAGTTCTTTAGCGTACTGGATAGTTAGTGATCGTTTCACTTCTTTGATTTTTTTTATCGCAATGTGCCCAGATAAATTGTATTTACATGAACGTTATTGAATTTCAATCAAGCCGAGAGTAGTCGCACTTCGAATTCTACCTCTCGGAAGCTTAATTCCTGCTAGATTAGTGTAGTGCAGGTCCTTATAGATTTCCTAACGTTTTGACTTCGAGGAAAGAGAGTAGGTCTTAGCATGTGTACTGGAAGCCTGTAGAGTATAGGATGGACCTTGGGAATTGTACCATGCTAATAGAGCGAGATTCTCAGAGTTCCGACAAGATAATTTGTACGGCCTACGACTTGATTTTGTTGGTTTTTGATATTGAAAATCGGGAGGAATCCATTATTGGGTCGGAAAACTCACGGTAAAGATTAGAAGATGGTTATGAATTAAGAACATTTTAGTTCTTTTTCACAATTTTGAAGTTGATGGGAAAGTGTTATTGTTCTTTATGTACTTATCTACAATTTATGGAGGCGTTCTTATGAGCTGAGAATATTTTAATTCTTTTACAAAATTTTGAAGCTGATGGGAAAGTATGGTTCTTTATGTACTTGTCTACAATTTGTGAAGGCATTCTTATAAACTAATAACATTTTAGGTCTTTTTCATCATTTTGAAGTTGATGGGAAACTTTGGTTGTTCTTTATTGACTTGTTTACAATTTTTGGAGGCATTCTTATGGACTTCCATTGTCGTATGTACGTGTGTCATCAAACCTTTTGTTTGCTTTTTTTTTTTTCAGTACTGGGAACATATATGAACCCCCTATCTGTATCTTTAAAGCCTAAACCATTACAAAATACTGTCATCAAGCAAGTTCTTGTCGCTTTTGGTTGCTGCTGAAAACTTTTGATGTTGTGTGCTCTGCTTTATAAACTTTTAGTTCTTTTTCTGTCTGCTGACCTGTTTCCACTGATAAAACAAATAAATCGTGAAGAAGCAAAAAATTGAGTTATTTCTCATTAATCAACATCAGTACGTAGAAACCACTGGTTATGAAACCGTATATTGCAAGATTGATATGATTAGAGTACTCGTTTGGATCTGATAAAGTTGTTCTGCTTAAGATTTTAAGTGCTTATGAGATTTTTTTCCCAAAGCTGACTAATATAATTTGTGCTAAAAGAGCCTTTCCATGTGGGCCTAATTGCTTTTTCACCATCATTATCCATTTTGTGTTGCTCAAGTTTTTATGTTCTTTAATTGATTGGGGTAGTGCATTATTAGCCAGTCCTGAGTATAGTTCACTGGCTCCCTCTACAATTGATCTTTTCCAATTTTCAGATCATTTTGATTCTCATCTTCTCAGTTACCTTGTTTTTTATCTGTAAACATGTTCAAAATTTTGTTGGTTTCATTTCTAGCTTGTTTGGATAAAACCATTTGAACAAGAAACATCACATCATCACATCAAGTTGCCATTCAATAAAGTGTTTGTCTAAAGAGAAAAAGGTAAGAGAGAGGATAGCAAATTTGATGGTAATTTTACTCTATGAAGTTCAGAGTTCTGAAAGCAGCCCCCCCACCAGGAAAAGATAGAAAAGAGAAAGCAAAACAAAAAGGGTACAGATTTAATTACAGTCTCCTATTCCTACTTACGTCACATCAGATATATTACTGACCTGGTGTTTTTCCTCTCTTCCTTATCCTCTCTCTCTATCTATCTCCTTGGATTTTCCCTAACAGGAATGATAAATGAAGCCTTTTCAAGCTGCAGGTCACTCCCAACCCAACTAACAGTCATCATGCAACGCCCAACCTTCTACAGCTTCAATGGCAGCTTTTGCTAGAGAGATCAAAGTTAAGGCTTTGCTTGGCAGTCCCAGCTACTTGTCTAAAACGAATTGTGCCACTGCCACCATCTATGGATGCTTGGTTGTTAATCACTTATTCACCGAAAGAAGAGTGAATCAACGTAGATTTGGTTGTACGGATGGCGACAATCCTAAGGTGAGTTTTTAAACAAGAAAGATTCTTAAAGACGACTAGTTACATCTATCTTTATGCATCACCCGATAGTTTGCTACATGATAAATATTTTTATAAATATTTATTTTGTGTACTTAATAAGGATGAGATGCATAGAAATAGATTTATAGAGAGGATAAATTGTAAATTTGGTTGGTGTGATTCGGAAAAAGTTATAATTTAGTCTTTGATTTTATGAAGTTTTATCAAATTAGAAGGATTAGATTTTAAGTTTCTCCAAACCATTACCATGTTTAGAACTATTTATTGCAGTTGGG

mRNA sequence

TGGTTGAAATTGATCGAAAAAAATAGTTTTAAAGAAACGAAAACCAAAACATTTGGTTACTTTTGTCAATCTACCATTTTATTTAAATAGTGTAGAAGTCGTGTCACGTATATATCCACCGGATCCGACGGTGGCGACGGCCGTTGCTGCCTCTGCTCGACGCAAGCCACCACATGAGTTCGCCCTGTTGTATTATCGTTGGTGCCGAAATCCTGATCTCCTGAGACGCTGCTTGTTTGGATAAAACCATTTGAACAAGAAACATCACATCATCACATCAAGTTGCCATTCAATAAAGTGTTTGTCTAAAGAGAAAAAGGTAAGAGAGAGGATAGCAAATTTGATGGTAATTTTACTCTATGAAGTTCAGAGTTCTGAAAGCAGCCCCCCCACCAGGAAAAGATAGAAAAGAGAAAGCAAAACAAAAAGGGAATGATAAATGAAGCCTTTTCAAGCTGCAGGTCACTCCCAACCCAACTAACAGTCATCATGCAACGCCCAACCTTCTACAGCTTCAATGGCAGCTTTTGCTAGAGAGATCAAAGTTAAGGCTTTGCTTGGCAGTCCCAGCTACTTGTCTAAAACGAATTGTGCCACTGCCACCATCTATGGATGCTTGGTTGTTAATCACTTATTCACCGAAAGAAGAGTGAATCAACGTAGATTTGGTTGTACGGATGGCGACAATCCTAAGGTGAGTTTTTAAACAAGAAAGATTCTTAAAGACGACTAGTTACATCTATCTTTATGCATCACCCGATAGTTTGCTACATGATAAATATTTTTATAAATATTTATTTTGTGTACTTAATAAGGATGAGATGCATAGAAATAGATTTATAGAGAGGATAAATTGTAAATTTGGTTGGTGTGATTCGGAAAAAGTTATAATTTAGTCTTTGATTTTATGAAGTTTTATCAAATTAGAAGGATTAGATTTTAAGTTTCTCCAAACCATTACCATGTTTAGAACTATTTATTGCAGTTGGG

Coding sequence (CDS)

ATGGCAGCTTTTGCTAGAGAGATCAAAGTTAAGGCTTTGCTTGGCAGTCCCAGCTACTTGTCTAAAACGAATTGTGCCACTGCCACCATCTATGGATGCTTGGTTGTTAATCACTTATTCACCGAAAGAAGAGTGAATCAACGTAGATTTGGTTGTACGGATGGCGACAATCCTAAGGTGAGTTTTTAA

Protein sequence

MAAFAREIKVKALLGSPSYLSKTNCATATIYGCLVVNHLFTERRVNQRRFGCTDGDNPKVSF

Homology

[Close]

BLAST of MELO3C020834 vs. NCBI nr
Match: XP_022971136.1 (uncharacterized protein LOC111469901 [Cucurbita maxima] >XP_022971137.1 uncharacterized protein LOC111469901 [Cucurbita maxima] >XP_022971138.1 uncharacterized protein LOC111469901 [Cucurbita maxima])

HSP 1 Score: 77.8 bits (190), Expect = 3.7e-11
Identity = 35/52 (67.31%), Postives = 43/52 (82.69%), Query Frame = 0


Query: 9   KVKALLGSPSYLSKTNCATATIYGCLVVNHLFTERRVNQRRFGCTDGDNPKV 61
           + KAL  SP+YLSKT+CATAT++GCLVV H  TERRVNQ RF CTDG +P++
Sbjct: 53  RAKALFDSPTYLSKTSCATATLFGCLVVPHSPTERRVNQCRFFCTDGGSPEI 104

[Close]

BLAST of MELO3C020834 vs. ExPASy TrEMBL
Match: A0A6J1I151 (uncharacterized protein LOC111469901 OS=Cucurbita maxima OX=3661 GN=LOC111469901 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.8e-11
Identity = 35/52 (67.31%), Postives = 43/52 (82.69%), Query Frame = 0


Query: 9   KVKALLGSPSYLSKTNCATATIYGCLVVNHLFTERRVNQRRFGCTDGDNPKV 61
           + KAL  SP+YLSKT+CATAT++GCLVV H  TERRVNQ RF CTDG +P++
Sbjct: 53  RAKALFDSPTYLSKTSCATATLFGCLVVPHSPTERRVNQCRFFCTDGGSPEI 104

The following BLAST results are available for this feature:

BLAST of MELO3C020834 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022971136.1	3.7e-11	67.31	uncharacterized protein LOC111469901 [Cucurbita maxima] >XP_022971137.1 uncharac...	[more]

BLAST of MELO3C020834 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C020834 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I151	1.8e-11	67.31	uncharacterized protein LOC111469901 OS=Cucurbita maxima OX=3661 GN=LOC111469901...	[more]

BLAST of MELO3C020834 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..33 score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C020834.1	MELO3C020834.1	mRNA