MELO3C020826.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C020826.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionDUF1279 domain-containing protein
Locationchr11: 2898345 .. 2899201 (-)
RNA-Seq ExpressionMELO3C020826.jh1
SyntenyMELO3C020826.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAACCCTAGCCTCAACCTCCACCGCCAAGCTCCGACGCGCCGCCTCCCCTTCCCGGACCTCTTCCCTTCTCTTTTAATTAATGTCTTTCTTCACCGGCGGCGGACGATTCCGCGAGCTTCTTAAGAAGTACGGAAAAGTTGCAATTGGAGTTCATTTCTCAGTATCGGGGGCTTCGATCACTGGCCTCTATGTCGCCATCAAGAACAATGTCGATGTAGAATCACTGCTCGATAAGCTACACATGGATCGATTCTTCTCTAAAGATCAGCCGCAGACAAATCCCTCGGAAGTCTCATCGTCCGTAGACGACGGATTTATAAACGAAGAAAGATCCGCGTCGGAAATTCAACCAACGAGGAATCGTACCGCCGAACTTGCAGCGTCGACTGGCGGTGCGTTGGCTTTGGCTGTGCTTTGCAACAAAGCATTACTCCCTATTCGGATTCCGATAACGATTGCGTTAACGCCGCCGATTGCGAGGTTGCTGGCGAGGCGAGGGATTGTGAGAAGTGGTTAAGGAACTGAAATCCATCTCATTTCTTCTTCTTCTTCTTCATGGACTTGCTGCATCTTGAGATCAACAGAGTACTGTGATTCATTCTCTACTTTTTCTTTCGAGAATTAATTTTTTTCAAGAAAGATTTTACGACAGATTTTGATAAGATATTTCTGTTCACATTGTCAAAATATAAATAAAAATCTCACCCTTAGTCCTTGATCTTGATCTTGATCTTGATCTTGTTCTTGTTCTTCCATTTCGTTATTCATGAAATTTTCGATTCTCTTATGAGAGAAGCTCAAGAAATTATATTTCATTAGAGTATACAAAATCAAAATGTAAAAAAAAAATTCTT

mRNA sequence

GAAAACCCTAGCCTCAACCTCCACCGCCAAGCTCCGACGCGCCGCCTCCCCTTCCCGGACCTCTTCCCTTCTCTTTTAATTAATGTCTTTCTTCACCGGCGGCGGACGATTCCGCGAGCTTCTTAAGAAGTACGGAAAAGTTGCAATTGGAGTTCATTTCTCAGTATCGGGGGCTTCGATCACTGGCCTCTATGTCGCCATCAAGAACAATGTCGATGTAGAATCACTGCTCGATAAGCTACACATGGATCGATTCTTCTCTAAAGATCAGCCGCAGACAAATCCCTCGGAAGTCTCATCGTCCGTAGACGACGGATTTATAAACGAAGAAAGATCCGCGTCGGAAATTCAACCAACGAGGAATCGTACCGCCGAACTTGCAGCGTCGACTGGCGGTGCGTTGGCTTTGGCTGTGCTTTGCAACAAAGCATTACTCCCTATTCGGATTCCGATAACGATTGCGTTAACGCCGCCGATTGCGAGGTTGCTGGCGAGGCGAGGGATTGTGAGAAGTGGTTAAGGAACTGAAATCCATCTCATTTCTTCTTCTTCTTCTTCATGGACTTGCTGCATCTTGAGATCAACAGAGTACTGTGATTCATTCTCTACTTTTTCTTTCGAGAATTAATTTTTTTCAAGAAAGATTTTACGACAGATTTTGATAAGATATTTCTGTTCACATTGTCAAAATATAAATAAAAATCTCACCCTTAGTCCTTGATCTTGATCTTGATCTTGATCTTGTTCTTGTTCTTCCATTTCGTTATTCATGAAATTTTCGATTCTCTTATGAGAGAAGCTCAAGAAATTATATTTCATTAGAGTATACAAAATCAAAATGTAAAAAAAAAATTCTT

Coding sequence (CDS)

ATGTCTTTCTTCACCGGCGGCGGACGATTCCGCGAGCTTCTTAAGAAGTACGGAAAAGTTGCAATTGGAGTTCATTTCTCAGTATCGGGGGCTTCGATCACTGGCCTCTATGTCGCCATCAAGAACAATGTCGATGTAGAATCACTGCTCGATAAGCTACACATGGATCGATTCTTCTCTAAAGATCAGCCGCAGACAAATCCCTCGGAAGTCTCATCGTCCGTAGACGACGGATTTATAAACGAAGAAAGATCCGCGTCGGAAATTCAACCAACGAGGAATCGTACCGCCGAACTTGCAGCGTCGACTGGCGGTGCGTTGGCTTTGGCTGTGCTTTGCAACAAAGCATTACTCCCTATTCGGATTCCGATAACGATTGCGTTAACGCCGCCGATTGCGAGGTTGCTGGCGAGGCGAGGGATTGTGAGAAGTGGTTAA

Protein sequence

MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFSKDQPQTNPSEVSSSVDDGFINEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPIRIPITIALTPPIARLLARRGIVRSG
Homology
BLAST of MELO3C020826.jh1 vs. NCBI nr
Match: XP_008457709.1 (PREDICTED: uncharacterized protein LOC103497342 [Cucumis melo] >KAA0045747.1 uncharacterized protein E6C27_scaffold243G002670 [Cucumis melo var. makuwa] >TYJ99535.1 uncharacterized protein E5676_scaffold123G001030 [Cucumis melo var. makuwa])

HSP 1 Score: 272 bits (696), Expect = 8.48e-92
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0

Query: 1   MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS 60
           MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS
Sbjct: 1   MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS 60

Query: 61  KDQPQTNPSEVSSSVDDGFINEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPI 120
           KDQPQTNPSEVSSSVDDGFINEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPI
Sbjct: 61  KDQPQTNPSEVSSSVDDGFINEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPI 120

Query: 121 RIPITIALTPPIARLLARRGIVRSG 145
           RIPITIALTPPIARLLARRGIVRSG
Sbjct: 121 RIPITIALTPPIARLLARRGIVRSG 145

BLAST of MELO3C020826.jh1 vs. NCBI nr
Match: XP_004147050.1 (uncharacterized protein LOC101221163 [Cucumis sativus] >KGN61943.1 hypothetical protein Csa_006287 [Cucumis sativus])

HSP 1 Score: 266 bits (680), Expect = 2.34e-89
Identity = 141/145 (97.24%), Postives = 143/145 (98.62%), Query Frame = 0

Query: 1   MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS 60
           MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS
Sbjct: 1   MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS 60

Query: 61  KDQPQTNPSEVSSSVDDGFINEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPI 120
           KDQPQ NPSE +SSVDDGF+NEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPI
Sbjct: 61  KDQPQINPSEATSSVDDGFMNEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPI 120

Query: 121 RIPITIALTPPIARLLARRGIVRSG 145
           RIPITIALTPPIARLLARRGIVRSG
Sbjct: 121 RIPITIALTPPIARLLARRGIVRSG 145

BLAST of MELO3C020826.jh1 vs. NCBI nr
Match: XP_038902628.1 (uncharacterized protein LOC120089278 [Benincasa hispida])

HSP 1 Score: 254 bits (648), Expect = 1.77e-84
Identity = 134/145 (92.41%), Postives = 140/145 (96.55%), Query Frame = 0

Query: 1   MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS 60
           M+FFTGGGRFRELL+KYGKVAIGVHFSVS ASITGLYVAIKNNVDVESLLDKLHMD FFS
Sbjct: 1   MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFFS 60

Query: 61  KDQPQTNPSEVSSSVDDGFINEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPI 120
           KDQPQT PSE++SSVDDGF+NEER ASEIQ TRNRTAELAASTGGALALAVLCNKALLPI
Sbjct: 61  KDQPQTTPSEITSSVDDGFMNEERPASEIQSTRNRTAELAASTGGALALAVLCNKALLPI 120

Query: 121 RIPITIALTPPIARLLARRGIVRSG 145
           RIPITIALTPPIARLLARRGI+RSG
Sbjct: 121 RIPITIALTPPIARLLARRGIMRSG 145

BLAST of MELO3C020826.jh1 vs. NCBI nr
Match: XP_023533856.1 (uncharacterized protein LOC111795580 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 237 bits (605), Expect = 8.02e-78
Identity = 129/152 (84.87%), Postives = 137/152 (90.13%), Query Frame = 0

Query: 1   MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS 60
           M+FFTGGGRFRELL+KYGKVAIGVHFSVS ASITGLYVAIKNNVDVESLLDKLHMD F S
Sbjct: 1   MAFFTGGGRFRELLRKYGKVAIGVHFSVSSASITGLYVAIKNNVDVESLLDKLHMDGFSS 60

Query: 61  KDQPQTNPSEVSSSVDDGFINEERSASEIQPT-------RNRTAELAASTGGALALAVLC 120
           KD PQT+PSE++SSVDDGF+ EER  SEIQ T       RNRTAELAASTGGALALAVLC
Sbjct: 61  KDTPQTSPSEITSSVDDGFVIEERPTSEIQSTVMEEPRKRNRTAELAASTGGALALAVLC 120

Query: 121 NKALLPIRIPITIALTPPIARLLARRGIVRSG 145
           NKALLPIR+PITIALTPPIARLLARRGI+RSG
Sbjct: 121 NKALLPIRVPITIALTPPIARLLARRGIMRSG 152

BLAST of MELO3C020826.jh1 vs. NCBI nr
Match: XP_022947464.1 (uncharacterized protein LOC111451320 [Cucurbita moschata] >KAG7027024.1 hypothetical protein SDJN02_11032, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 234 bits (598), Expect = 9.35e-77
Identity = 128/152 (84.21%), Postives = 136/152 (89.47%), Query Frame = 0

Query: 1   MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS 60
           M+FFTGGGRFRELL+KYGKVAIGVHFSVS ASITGLYVAIKNNVDVESLLDKLHMD F S
Sbjct: 1   MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSS 60

Query: 61  KDQPQTNPSEVSSSVDDGFINEERSASEIQPT-------RNRTAELAASTGGALALAVLC 120
           KD PQT+PSE++SSVDDGF+ EER  S IQ T       RNRTAELAASTGGALALAVLC
Sbjct: 61  KDTPQTSPSEITSSVDDGFVIEERPTSGIQSTVMEEPRKRNRTAELAASTGGALALAVLC 120

Query: 121 NKALLPIRIPITIALTPPIARLLARRGIVRSG 145
           NKALLPIR+PITIALTPPIARLLARRGI+RSG
Sbjct: 121 NKALLPIRVPITIALTPPIARLLARRGIMRSG 152

BLAST of MELO3C020826.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TV59 (DUF1279 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001030 PE=4 SV=1)

HSP 1 Score: 272 bits (696), Expect = 4.11e-92
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0

Query: 1   MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS 60
           MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS
Sbjct: 1   MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS 60

Query: 61  KDQPQTNPSEVSSSVDDGFINEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPI 120
           KDQPQTNPSEVSSSVDDGFINEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPI
Sbjct: 61  KDQPQTNPSEVSSSVDDGFINEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPI 120

Query: 121 RIPITIALTPPIARLLARRGIVRSG 145
           RIPITIALTPPIARLLARRGIVRSG
Sbjct: 121 RIPITIALTPPIARLLARRGIVRSG 145

BLAST of MELO3C020826.jh1 vs. ExPASy TrEMBL
Match: A0A1S3C646 (uncharacterized protein LOC103497342 OS=Cucumis melo OX=3656 GN=LOC103497342 PE=4 SV=1)

HSP 1 Score: 272 bits (696), Expect = 4.11e-92
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0

Query: 1   MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS 60
           MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS
Sbjct: 1   MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS 60

Query: 61  KDQPQTNPSEVSSSVDDGFINEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPI 120
           KDQPQTNPSEVSSSVDDGFINEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPI
Sbjct: 61  KDQPQTNPSEVSSSVDDGFINEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPI 120

Query: 121 RIPITIALTPPIARLLARRGIVRSG 145
           RIPITIALTPPIARLLARRGIVRSG
Sbjct: 121 RIPITIALTPPIARLLARRGIVRSG 145

BLAST of MELO3C020826.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LJH5 (DUF1279 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G270860 PE=4 SV=1)

HSP 1 Score: 266 bits (680), Expect = 1.13e-89
Identity = 141/145 (97.24%), Postives = 143/145 (98.62%), Query Frame = 0

Query: 1   MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS 60
           MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS
Sbjct: 1   MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS 60

Query: 61  KDQPQTNPSEVSSSVDDGFINEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPI 120
           KDQPQ NPSE +SSVDDGF+NEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPI
Sbjct: 61  KDQPQINPSEATSSVDDGFMNEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPI 120

Query: 121 RIPITIALTPPIARLLARRGIVRSG 145
           RIPITIALTPPIARLLARRGIVRSG
Sbjct: 121 RIPITIALTPPIARLLARRGIVRSG 145

BLAST of MELO3C020826.jh1 vs. ExPASy TrEMBL
Match: A0A6J1G6W3 (uncharacterized protein LOC111451320 OS=Cucurbita moschata OX=3662 GN=LOC111451320 PE=4 SV=1)

HSP 1 Score: 234 bits (598), Expect = 4.53e-77
Identity = 128/152 (84.21%), Postives = 136/152 (89.47%), Query Frame = 0

Query: 1   MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS 60
           M+FFTGGGRFRELL+KYGKVAIGVHFSVS ASITGLYVAIKNNVDVESLLDKLHMD F S
Sbjct: 1   MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSS 60

Query: 61  KDQPQTNPSEVSSSVDDGFINEERSASEIQPT-------RNRTAELAASTGGALALAVLC 120
           KD PQT+PSE++SSVDDGF+ EER  S IQ T       RNRTAELAASTGGALALAVLC
Sbjct: 61  KDTPQTSPSEITSSVDDGFVIEERPTSGIQSTVMEEPRKRNRTAELAASTGGALALAVLC 120

Query: 121 NKALLPIRIPITIALTPPIARLLARRGIVRSG 145
           NKALLPIR+PITIALTPPIARLLARRGI+RSG
Sbjct: 121 NKALLPIRVPITIALTPPIARLLARRGIMRSG 152

BLAST of MELO3C020826.jh1 vs. ExPASy TrEMBL
Match: A0A6J1I2F7 (uncharacterized protein LOC111469888 OS=Cucurbita maxima OX=3661 GN=LOC111469888 PE=4 SV=1)

HSP 1 Score: 233 bits (594), Expect = 1.84e-76
Identity = 128/152 (84.21%), Postives = 135/152 (88.82%), Query Frame = 0

Query: 1   MSFFTGGGRFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFS 60
           M+FFTGGGRFRELL+KYGKVAIGVHFSVS ASITGLYVAIKNNVDVESLLDKLHMD F S
Sbjct: 1   MAFFTGGGRFRELLRKYGKVAIGVHFSVSAASITGLYVAIKNNVDVESLLDKLHMDGFSS 60

Query: 61  KDQPQTNPSEVSSSVDDGFINEERSASEIQPT-------RNRTAELAASTGGALALAVLC 120
           KD PQT+PSE++ SVDDGF+ EER  S IQ T       RNRTAELAASTGGALALAVLC
Sbjct: 61  KDTPQTSPSEITPSVDDGFVIEERPTSGIQSTVVEEPRKRNRTAELAASTGGALALAVLC 120

Query: 121 NKALLPIRIPITIALTPPIARLLARRGIVRSG 145
           NKALLPIRIPITIALTPPIARLLARRGI+RSG
Sbjct: 121 NKALLPIRIPITIALTPPIARLLARRGIMRSG 152

BLAST of MELO3C020826.jh1 vs. TAIR 10
Match: AT2G20940.1 (Protein of unknown function (DUF1279) )

HSP 1 Score: 142.1 bits (357), Expect = 3.5e-34
Identity = 79/137 (57.66%), Postives = 99/137 (72.26%), Query Frame = 0

Query: 9   RFRELLKKYGKVAIGVHFSVSGASITGLYVAIKNNVDVESLLDKLHMDRFFSKDQPQTNP 68
           R +E++KKYGKVA+GVHFSVSG SI+G Y+AIKNNVDVESLL+K  +  F SK+ P  NP
Sbjct: 4   RLKEIVKKYGKVALGVHFSVSGVSISGFYIAIKNNVDVESLLEKYQIPWFSSKENP--NP 63

Query: 69  SEVSSSVDDGFINEERSASEIQPTRNRTAELAASTGGALALAVLCNKALLPIRIPITIAL 128
           S      + G +  +          N+T +LA S GGALALAVLCNKAL PIR+PIT+AL
Sbjct: 64  SLDLKLEEQGSVTSD----------NKTKQLAKSAGGALALAVLCNKALFPIRVPITMAL 123

Query: 129 TPPIARLLARRGIVRSG 146
           TPPIAR L +R I+++G
Sbjct: 124 TPPIARFLRQRKILKTG 128

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008457709.18.48e-92100.00PREDICTED: uncharacterized protein LOC103497342 [Cucumis melo] >KAA0045747.1 unc... [more]
XP_004147050.12.34e-8997.24uncharacterized protein LOC101221163 [Cucumis sativus] >KGN61943.1 hypothetical ... [more]
XP_038902628.11.77e-8492.41uncharacterized protein LOC120089278 [Benincasa hispida][more]
XP_023533856.18.02e-7884.87uncharacterized protein LOC111795580 [Cucurbita pepo subsp. pepo][more]
XP_022947464.19.35e-7784.21uncharacterized protein LOC111451320 [Cucurbita moschata] >KAG7027024.1 hypothet... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TV594.11e-92100.00DUF1279 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A1S3C6464.11e-92100.00uncharacterized protein LOC103497342 OS=Cucumis melo OX=3656 GN=LOC103497342 PE=... [more]
A0A0A0LJH51.13e-8997.24DUF1279 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G270860 PE=... [more]
A0A6J1G6W34.53e-7784.21uncharacterized protein LOC111451320 OS=Cucurbita moschata OX=3662 GN=LOC1114513... [more]
A0A6J1I2F71.84e-7684.21uncharacterized protein LOC111469888 OS=Cucurbita maxima OX=3661 GN=LOC111469888... [more]
Match NameE-valueIdentityDescription
AT2G20940.13.5e-3457.66Protein of unknown function (DUF1279) [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009688Protein FAM210A/B-like domainPFAMPF06916DUF1279coord: 9..130
e-value: 2.6E-26
score: 92.0
NoneNo IPR availablePANTHERPTHR21377:SF0PROTEIN FAM210B, MITOCHONDRIALcoord: 8..141
NoneNo IPR availablePANTHERPTHR21377UNCHARACTERIZEDcoord: 8..141

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020826.jh1.t1MELO3C020826.jh1.t1mRNA