MELO3C020824.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C020824.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionPre-mRNA-splicing factor SYF2
Locationchr11: 2912617 .. 2915891 (+)
RNA-Seq ExpressionMELO3C020824.jh1
SyntenyMELO3C020824.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGAGGGATCTTGTGCAATTCTTCTCCCTTCTTCCCTAAACGCGAAGAGGAATCTGTTCCCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCTTCTTCTTCGTGTTCTAACCCAAGCGGAAAAACCTAGGTTTCAGGTACTGTTCTGTAGCTCTCTTTTAGCATCACTTATTCTTTTATTACTTTTCTCATAGTTTCCTATGCTTGCTTTTGCTTGAATTTCGGTTTTGCATCGCAAGATTTGACTGGAAGTAGCGATTGTTTTCGTGCTGCTATTTGTTTTTTTTTTTTTCTTGCTTGTTCGCTTTCCCAGAATACGAACAATAAAAAGGATTGTTGTTTTCCCCCCTTTTTTGGGTCTGTTTTTTTGGATGCTATAGTGGACTCAATCCTTTGTTATGTTGCTGTTCTTCGCTTCTCTTCCCCGGAAGAATCAATTTTCCGTCGGATAACTATGTTGGTTCGATAAATTCGGTTGCTTTAACAAGATTCGGTTGGAAATTTGAATGTTTTTTTTTTTTGCTTGTTTGATTGATCATGTAATGCGACCATTGCATCCAATGGCACCCTTTTCCGGTTGTTTCGTTTATGGGTTTAAGAGTCCATAATTCTTTTACAAGATTTTTGAGCTCCGTTTAATTGTGTCTCTATATGCAGTGTATTATTGGGGTAAGATAAGTTGTTGCAGAGATGTCTGATGAAGGAAGAGTACACCCTGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTAAAGTAATAGCTCAAATCAAAGCCCGGAGTCAGAAAAACGAGCCAGGTTTTTTGCCATACTGCAATGTCTTTGCAATTACCTTGAGCATCATGACTTTCTCTAATTGTCATCACTGTTTACCCTTTTGTGAAATTATTAATGCCCTCTTCGATTTACTTACTTCTTCTAAATTGTTCAAAATTGGCTCTATAAATTGCTTAATCGTCTTTGATTCCCTCCACCCTTCAATTTCTGATTATGTCATTAGCTACGTTTTCCTTCGCCTTTAATTTTTTCTCGTGAATTGTGATCACAGTTCCCACTTCATCAGAAACTGTACAAGCTGGTCGAAGTAGTGGTTCTTCCAGTTTTGTGCCTCCTGATGAGTATGAAGATCTTCATGATGAAAAGCCTGACGAAGAAGGGCACAGTGATGGTGATCTTGACAAATTTAGTGGCGAGGAAATTGTGGAAGGAGACTTCACAAAGCTCACGGGGAGGAAAAAGAAGTTGTTTGAAATTAGGCTTAAGATGGTAATTTTCTACAATTTTTAAAAAAGTAACAATCAACTATTATCGAGTAGTCATGACTTAGGCATGGTGGATGCAGAATGAGGCTCGGAAAGCTAATCAAACAGCAATCGCTGCCGAGAAAAAGAAAATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGAGGATCGGAAGAAGAAAATTGGGAAGCTTTTGGATGCAAATGGCTTGGATATGACAAAATCATATATGTTAGATACACAAGAGGCAGCAGAGGCCAAATATAAGAAATGGGAGAAGGATCCAGCTCCCTATGGATGGGATGGTGAGTCTCTATTCTTTTGTGCACATGGGCTCTTTAGAATACGTGCAGCTGCACCTATGTTTTCCGTTTGACATAAAATTATACTATGCTGATTTTAGCTTTTGTGTGTATAGACAGATGATTTTTTAGTAATTTTATAAGGAACCCTATTATGCTGGTTGATGATGGAAACATGATCTGATTCTAGGATATAGATATTATGTGGTGAGATGTCTAGGATGTGTATGCATACTCCTGCCCTAATTGGTGTGAACTCTTGTGTAGTATGGTTTTTCATAGCTATAGTCCTCTATGTTTCTCTCTGGTACAGAGCCATTTAGATTGATTGTTTAACTTTGATTTGTATCATATTCCAATATAATTACTTTTCTTTAGGGATGTGGGATGGCTTGGGTATAAAGTTTACTTAACTGGTTGTGTTTGACCTATTTCTTGTCACTATTTTAACACTTGTATTAAAAAAAGGTTAAACTGCGTTTGTTTTGACAGTCTTTAACCAGAAAACTTTATATAATGCATACAAGAAGAGGACGAAGAATGTAAATATTGACCTTGAGGAATATAATAAAATGAAAGAATCTGATCCTGAGTTCTACCGTGAGGCTTCAAGTCTTCAGTATGGAAAGGTAATGTTAGTTCCATGGTATAATTTCCAGTCTCGACCGTAGATGCAATTATTAGATTTCTTAGGACATAGCTTTCCCCACTACTCTGCAGGCACCTAAGATTTCAGAGGATAAGATAGACAATATGGTGAAAGAACTCAAAGACCGAGATGAGAAGCGAAAGTCGTTTAGCCGTAGGAGGAAGTTCCATGAAGACAAGGATATCGATTCCATCAATGACCGTAATGAGCATTTCAACAAAAAGATTGAGCGGGCCTTTGGTAGATACACTCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCATTACCTGATTAAGGTATTGCTTAGAAGTGGCTCTGTTAGTTCCTACATGCAACTTTTTCCCTCTCCATATGCTTGATGCATGTTTTCCTCTTATTGTTTTTCACTACCTGCTAAGGAAGACTTACGTACAACCTAAACTGCACCCATCTTCATGTATCCCTTTCAATTTCAAAGTGAAAAAAAATATTTTTAGAAAAGAAGTTTTTGTGACGTGGCAGCTTGGAATTAGGCACTTGGGTGGGTGGGCTGCAAAAAGATAGCGCAACCAAGTGTTTTTCTCCTTTTTACCCTTGCTCCCCTTTCTCTGTTGTAACAAATTGTATCTTCTATGTTCTTTATCTGGCTGAAATTATGTTTTTTTCTTTCTAACCATGGTTTCCTTTGCTTGATTGAATCTTATGTTCTTTTTCGTTTTTCTGTAGGATTTTCGAGGAAGATCGGAATTCTAGTAGTAGTTTGGAGTATTTAAAGCCTTTCTCCTTTAATTTCGAAAAGAAGTTATTCTGTAAAAGATTTCTGGCAAAGCTACAGAATTCTCCTTTTAAGTGAAGAGAAAATTGTAAGGTCACATGCCTTAGATAAGCAATGTACAATGTAGCAATATATTTGACAACAGTAACTTTGATTGAGTTTGTTTCATTGTGAATACCTTTGTTTCAACAGGTACGAATTAACCCAAACAAAGGATATCATTTTTTCTCCCCCTTAACAAAGATGGTAAAGAACGAGTAATTTTGACTGACTT

mRNA sequence

GGGAGGGATCTTGTGCAATTCTTCTCCCTTCTTCCCTAAACGCGAAGAGGAATCTGTTCCCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCTTCTTCTTCGTGTTCTAACCCAAGCGGAAAAACCTAGGTTTCAGTGTATTATTGGGGTAAGATAAGTTGTTGCAGAGATGTCTGATGAAGGAAGAGTACACCCTGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTAAAGTAATAGCTCAAATCAAAGCCCGGAGTCAGAAAAACGAGCCAGTTCCCACTTCATCAGAAACTGTACAAGCTGGTCGAAGTAGTGGTTCTTCCAGTTTTGTGCCTCCTGATGAGTATGAAGATCTTCATGATGAAAAGCCTGACGAAGAAGGGCACAGTGATGGTGATCTTGACAAATTTAGTGGCGAGGAAATTGTGGAAGGAGACTTCACAAAGCTCACGGGGAGGAAAAAGAAGTTGTTTGAAATTAGGCTTAAGATGAATGAGGCTCGGAAAGCTAATCAAACAGCAATCGCTGCCGAGAAAAAGAAAATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGAGGATCGGAAGAAGAAAATTGGGAAGCTTTTGGATGCAAATGGCTTGGATATGACAAAATCATATATGTTAGATACACAAGAGGCAGCAGAGGCCAAATATAAGAAATGGGAGAAGGATCCAGCTCCCTATGGATGGGATGTCTTTAACCAGAAAACTTTATATAATGCATACAAGAAGAGGACGAAGAATGTAAATATTGACCTTGAGGAATATAATAAAATGAAAGAATCTGATCCTGAGTTCTACCGTGAGGCTTCAAGTCTTCAGTATGGAAAGGCACCTAAGATTTCAGAGGATAAGATAGACAATATGGTGAAAGAACTCAAAGACCGAGATGAGAAGCGAAAGTCGTTTAGCCGTAGGAGGAAGTTCCATGAAGACAAGGATATCGATTCCATCAATGACCGTAATGAGCATTTCAACAAAAAGATTGAGCGGGCCTTTGGTAGATACACTCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCATTACCTGATTAAGGATTTTCGAGGAAGATCGGAATTCTAGTAGTAGTTTGGAGTATTTAAAGCCTTTCTCCTTTAATTTCGAAAAGAAGTTATTCTGTAAAAGATTTCTGGCAAAGCTACAGAATTCTCCTTTTAAGTGAAGAGAAAATTGTAAGGTCACATGCCTTAGATAAGCAATGTACAATGTAGCAATATATTTGACAACAGTAACTTTGATTGAGTTTGTTTCATTGTGAATACCTTTGTTTCAACAGGTACGAATTAACCCAAACAAAGGATATCATTTTTTCTCCCCCTTAACAAAGATGGTAAAGAACGAGTAATTTTGACTGACTT

Coding sequence (CDS)

ATGTCTGATGAAGGAAGAGTACACCCTGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTAAAGTAATAGCTCAAATCAAAGCCCGGAGTCAGAAAAACGAGCCAGTTCCCACTTCATCAGAAACTGTACAAGCTGGTCGAAGTAGTGGTTCTTCCAGTTTTGTGCCTCCTGATGAGTATGAAGATCTTCATGATGAAAAGCCTGACGAAGAAGGGCACAGTGATGGTGATCTTGACAAATTTAGTGGCGAGGAAATTGTGGAAGGAGACTTCACAAAGCTCACGGGGAGGAAAAAGAAGTTGTTTGAAATTAGGCTTAAGATGAATGAGGCTCGGAAAGCTAATCAAACAGCAATCGCTGCCGAGAAAAAGAAAATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGAGGATCGGAAGAAGAAAATTGGGAAGCTTTTGGATGCAAATGGCTTGGATATGACAAAATCATATATGTTAGATACACAAGAGGCAGCAGAGGCCAAATATAAGAAATGGGAGAAGGATCCAGCTCCCTATGGATGGGATGTCTTTAACCAGAAAACTTTATATAATGCATACAAGAAGAGGACGAAGAATGTAAATATTGACCTTGAGGAATATAATAAAATGAAAGAATCTGATCCTGAGTTCTACCGTGAGGCTTCAAGTCTTCAGTATGGAAAGGCACCTAAGATTTCAGAGGATAAGATAGACAATATGGTGAAAGAACTCAAAGACCGAGATGAGAAGCGAAAGTCGTTTAGCCGTAGGAGGAAGTTCCATGAAGACAAGGATATCGATTCCATCAATGACCGTAATGAGCATTTCAACAAAAAGATTGAGCGGGCCTTTGGTAGATACACTCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCATTACCTGATTAA

Protein sequence

MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD
Homology
[Close]
BLAST of MELO3C020824.jh1 vs. NCBI nr
Match: XP_008457705.1 (PREDICTED: pre-mRNA-splicing factor syf2 [Cucumis melo] >KAA0045744.1 pre-mRNA-splicing factor syf2 [Cucumis melo var. makuwa] >TYJ99538.1 pre-mRNA-splicing factor syf2 [Cucumis melo var. makuwa])

HSP 1 Score: 618 bits (1593), Expect = 6.75e-223
Identity = 314/315 (99.68%), Postives = 315/315 (100.00%), Query Frame = 0 

Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60
           MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120
           VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA
Sbjct: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKI+NMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIENMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 315
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]
BLAST of MELO3C020824.jh1 vs. NCBI nr
Match: XP_011649295.1 (pre-mRNA-splicing factor syf2 [Cucumis sativus] >KGN61940.1 hypothetical protein Csa_006692 [Cucumis sativus])

HSP 1 Score: 611 bits (1576), Expect = 2.64e-220
Identity = 310/315 (98.41%), Postives = 313/315 (99.37%), Query Frame = 0 

Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60
           MSDEGRVHPDCRNASNPYHECSEYCFKVIA++KARSQKNEPVPTSSETVQAGRSSGSSSF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSF 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120
           VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEE VEGDFTKLTGRKKKLFEIRLKMNEARKA
Sbjct: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTK+YMLDTQEAAE K
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 315
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]
BLAST of MELO3C020824.jh1 vs. NCBI nr
Match: XP_038900868.1 (pre-mRNA-splicing factor syf2 [Benincasa hispida])

HSP 1 Score: 593 bits (1530), Expect = 2.51e-213
Identity = 303/315 (96.19%), Postives = 309/315 (98.10%), Query Frame = 0 

Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60
           MSDEGRVHPDCRNASNPYHECSEYCFKVIA++KARSQKNEPVPT SE VQAG S GSS+F
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAEVKARSQKNEPVPTLSEAVQAGHS-GSSNF 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120
           VPPDEYEDLHDEKPDE GHSDGD+DKFSGEE VEGDFTKLTGRKKKLFEIRLKMNEARKA
Sbjct: 61  VPPDEYEDLHDEKPDE-GHSDGDIDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTK+YMLDTQEAAEAK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEAK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVN+DLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 315
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 313

[Close]
BLAST of MELO3C020824.jh1 vs. NCBI nr
Match: XP_022943827.1 (pre-mRNA-splicing factor syf2-like [Cucurbita moschata] >XP_022943828.1 pre-mRNA-splicing factor syf2-like [Cucurbita moschata])

HSP 1 Score: 590 bits (1521), Expect = 6.37e-212
Identity = 297/315 (94.29%), Postives = 310/315 (98.41%), Query Frame = 0 

Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60
           MSDEGRVHPDCRNASNPYHEC+EYCFKVIA++KAR+Q+NEPVPTSSE VQAGRSSGSS+F
Sbjct: 1   MSDEGRVHPDCRNASNPYHECTEYCFKVIAEVKARNQQNEPVPTSSEGVQAGRSSGSSNF 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120
           VPPDEYEDL DEKP+EEGHSDGD DKFSG E VEGDFTKLTGRKKKLFEIRLKMNEARKA
Sbjct: 61  VPPDEYEDLRDEKPNEEGHSDGDTDKFSGGENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM+K+YMLDTQEAAE+K
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMSKAYMLDTQEAAESK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLY+AYKKRTKNVN+DLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKIDNMVKELKDR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 315
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]
BLAST of MELO3C020824.jh1 vs. NCBI nr
Match: XP_022986094.1 (pre-mRNA-splicing factor syf2-like [Cucurbita maxima] >XP_022986095.1 pre-mRNA-splicing factor syf2-like [Cucurbita maxima])

HSP 1 Score: 589 bits (1518), Expect = 1.83e-211
Identity = 296/315 (93.97%), Postives = 310/315 (98.41%), Query Frame = 0 

Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60
           MSDEGRVHPDCRNASNPYHEC+EYCFKVIA++KAR+Q+NEPVPTSSE VQAGRSSGSS+F
Sbjct: 1   MSDEGRVHPDCRNASNPYHECTEYCFKVIAEVKARNQQNEPVPTSSEGVQAGRSSGSSNF 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120
           VPPDEYEDL DEKP+EEGHSDGD DKFSG E VEGDFTKLTGRKKKLFEIRLKMNEARKA
Sbjct: 61  VPPDEYEDLRDEKPNEEGHSDGDTDKFSGGENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM+K+YMLDTQEAAE+K
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMSKAYMLDTQEAAESK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLY+AYKKRTKNVN+DLEEYNKMK+SDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKIDNMVKELKDR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 315
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]
BLAST of MELO3C020824.jh1 vs. ExPASy Swiss-Prot
Match: Q8AVQ6 (Pre-mRNA-splicing factor syf2 OS=Xenopus laevis OX=8355 GN=syf2 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.3e-25
Identity = 85/219 (38.81%), Postives = 125/219 (57.08%), Query Frame = 0 

Query: 99  KLTGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGK 158
           K   R +K  E+ LK NEARK N   +  E K+ + PS  E+R    +  L++ +KK  +
Sbjct: 26  KREARLRKFRELHLKTNEARKLNHQEVVEEDKRQKLPSNWEARKARLEWELKNEEKK--R 85

Query: 159 LLDANGLDMTKSYMLD--TQEAAEAKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNI 218
              ANG+D  ++ +L+   ++A   + KK  K+P   G+  +    L   Y++ TK +  
Sbjct: 86  ECAANGVDFERAKLLEISAEDAERWERKKKRKNP-DLGFSDYAAAQL-RQYQRLTKQIKP 145

Query: 219 DLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHE 278
           D+EEY   KE   E +   S   Y      S+  ID MV +L+ + EKR+ +SRRR +++
Sbjct: 146 DMEEYEMEKEKQGELFYPTSDSLYHGTHVPSQSGIDRMVTDLEKQIEKREKYSRRRAYND 205

Query: 279 DKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 314
           D DID IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 206 DADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 240

[Close]
BLAST of MELO3C020824.jh1 vs. ExPASy Swiss-Prot
Match: Q28G05 (Pre-mRNA-splicing factor syf2 OS=Xenopus tropicalis OX=8364 GN=syf2 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.6e-25
Identity = 84/219 (38.36%), Postives = 125/219 (57.08%), Query Frame = 0 

Query: 99  KLTGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGK 158
           K   R +K  E+ LK NEARK N   +  E K+ + PS  E+R    +  L++ +KK  +
Sbjct: 35  KREARLRKFRELHLKTNEARKLNHQEVVEEDKRQKLPSNWEARKARLEWELKEEEKK--R 94

Query: 159 LLDANGLDMTKSYMLD--TQEAAEAKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNI 218
              ANG+D  ++ +L+   ++A   + KK  K+P   G+  +    L   Y++ TK +  
Sbjct: 95  ECAANGVDYERAKLLEISAEDAERWERKKKRKNP-DLGFSDYAAAQL-RQYQRLTKQIKP 154

Query: 219 DLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHE 278
           D+EEY   K+   E +   S   Y      S+  ID MV +L+ + EKR+ +SRRR +++
Sbjct: 155 DMEEYEMEKQKQGEMFYPTSESLYHGTHIPSQSGIDRMVTDLEKQIEKREKYSRRRAYND 214

Query: 279 DKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 314
           D DID IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 215 DADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 249

[Close]
BLAST of MELO3C020824.jh1 vs. ExPASy Swiss-Prot
Match: Q6DGP2 (Pre-mRNA-splicing factor syf2 OS=Danio rerio OX=7955 GN=syf2 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.5e-23
Identity = 85/229 (37.12%), Postives = 128/229 (55.90%), Query Frame = 0 

Query: 90  EEIVEGDFT-KLTGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSE---SRGISKQK 149
           EE+ E     K   R +K  E+  K NEARK N   +  E K+++ PS     +   + +
Sbjct: 14  EEVTETPAAQKREERLRKFRELHFKRNEARKLNHQEVVEEDKRLKLPSNWEAKKARLEYE 73

Query: 150 WLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAKYKKWEKDPAPYGWDVFNQKTLYNAY 209
            L D+KKK          D  K   +  ++A   + KK +++P P G+  + +  L   Y
Sbjct: 74  LLVDQKKK-ECAERGEDYDRVKLLEISAEDAERWERKKKKRNPDP-GFSGYAEAQL-RQY 133

Query: 210 KKRTKNVNIDLEEYNKMKES-DPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRK 269
           ++ TK +  D+E Y K KE    +F+  ++SL YG     S+D I+ MV +++ + EKR 
Sbjct: 134 QRLTKQIKPDMENYEKQKEECGEDFHPTSNSLIYGTHVP-SKDSINRMVDDVEKQIEKRA 193

Query: 270 SFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 314
            +SRRR +++D DID IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 194 KYSRRRAYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 238

[Close]
BLAST of MELO3C020824.jh1 vs. ExPASy Swiss-Prot
Match: Q6DV01 (Pre-mRNA-splicing factor syf2 OS=Gekko japonicus OX=146911 GN=syf2 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.0e-23
Identity = 81/215 (37.67%), Postives = 128/215 (59.53%), Query Frame = 0 

Query: 105 KKLFEIRLKMNEARKANQTAIAAEKKKMEPPSE-SRGISKQKW---LEDRKKKIGKLLDA 164
           +K  E+ LK NEARK N   +  E K+++ P+      S+ +W   +E++KK+      A
Sbjct: 41  RKFRELHLKRNEARKLNHQEVVEEDKRLKLPANWEAKKSRLEWELKVEEKKKE----CVA 100

Query: 165 NGLDMTKSYMLD-TQEAAEAKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEY 224
            G D  +  +L+ + E AE   +K +K     G+  +    +   Y++ T+ +  DLE+Y
Sbjct: 101 KGEDYERVKLLEISAEDAERFERKRKKRNPDLGFSDYAAAQM-RQYQRLTRQIKPDLEKY 160

Query: 225 NKMK-ESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDI 284
            K++ ES  EFY  ++SL +G      E  +D MV++L+ + +KR+ +SRRR +++D DI
Sbjct: 161 AKLREESGEEFYPTSNSLLHGTHVPCKEG-VDKMVEDLEKQIQKREKYSRRRPYNDDADI 220

Query: 285 DSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 314
           D IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 221 DYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 249

[Close]
BLAST of MELO3C020824.jh1 vs. ExPASy Swiss-Prot
Match: Q9D198 (Pre-mRNA-splicing factor SYF2 OS=Mus musculus OX=10090 GN=Syf2 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.6e-23
Identity = 83/215 (38.60%), Postives = 125/215 (58.14%), Query Frame = 0 

Query: 103 RKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDA 162
           R +K  E+ LK NEARK N   +  E K+++ P+  E++    +  L++ +KK  K   A
Sbjct: 32  RLRKFRELHLKRNEARKLNHQEVVEEDKRLKLPANWEAKKARLEWELQEEEKK--KECAA 91

Query: 163 NGLDMTKSYMLD-TQEAAEAKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEY 222
            G D  K  +L+ + E AE   ++ +K     G+  +    L   Y + TK +  D+E Y
Sbjct: 92  RGEDYEKVKLLEISAEDAERWERRKKKKNPDLGFSDYAAAQL-RQYHRLTKQIKPDMESY 151

Query: 223 NKMKESDPE-FYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDI 282
            + +E   E F+  ++SL +G     SE+ ID MV +L+ + EKR  +SRRR +++D DI
Sbjct: 152 ERQREKHGEDFFPTSNSLLHGTHVPSSEE-IDRMVLDLEKQIEKRDKYSRRRPYNDDADI 211

Query: 283 DSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 314
           D IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 212 DYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 242

[Close]
BLAST of MELO3C020824.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TRR3 (Pre-mRNA-splicing factor SYF2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001060 PE=3 SV=1)

HSP 1 Score: 618 bits (1593), Expect = 3.27e-223
Identity = 314/315 (99.68%), Postives = 315/315 (100.00%), Query Frame = 0 

Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60
           MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120
           VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA
Sbjct: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKI+NMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIENMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 315
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]
BLAST of MELO3C020824.jh1 vs. ExPASy TrEMBL
Match: A0A1S3C6T5 (Pre-mRNA-splicing factor SYF2 OS=Cucumis melo OX=3656 GN=LOC103497339 PE=3 SV=1)

HSP 1 Score: 618 bits (1593), Expect = 3.27e-223
Identity = 314/315 (99.68%), Postives = 315/315 (100.00%), Query Frame = 0 

Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60
           MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120
           VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA
Sbjct: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKI+NMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIENMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 315
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]
BLAST of MELO3C020824.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LJ81 (Pre-mRNA-splicing factor SYF2 OS=Cucumis sativus OX=3659 GN=Csa_2G270830 PE=3 SV=1)

HSP 1 Score: 611 bits (1576), Expect = 1.28e-220
Identity = 310/315 (98.41%), Postives = 313/315 (99.37%), Query Frame = 0 

Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60
           MSDEGRVHPDCRNASNPYHECSEYCFKVIA++KARSQKNEPVPTSSETVQAGRSSGSSSF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSF 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120
           VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEE VEGDFTKLTGRKKKLFEIRLKMNEARKA
Sbjct: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTK+YMLDTQEAAE K
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 315
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]
BLAST of MELO3C020824.jh1 vs. ExPASy TrEMBL
Match: A0A6J1FXE9 (Pre-mRNA-splicing factor SYF2 OS=Cucurbita moschata OX=3662 GN=LOC111448448 PE=3 SV=1)

HSP 1 Score: 590 bits (1521), Expect = 3.08e-212
Identity = 297/315 (94.29%), Postives = 310/315 (98.41%), Query Frame = 0 

Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60
           MSDEGRVHPDCRNASNPYHEC+EYCFKVIA++KAR+Q+NEPVPTSSE VQAGRSSGSS+F
Sbjct: 1   MSDEGRVHPDCRNASNPYHECTEYCFKVIAEVKARNQQNEPVPTSSEGVQAGRSSGSSNF 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120
           VPPDEYEDL DEKP+EEGHSDGD DKFSG E VEGDFTKLTGRKKKLFEIRLKMNEARKA
Sbjct: 61  VPPDEYEDLRDEKPNEEGHSDGDTDKFSGGENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM+K+YMLDTQEAAE+K
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMSKAYMLDTQEAAESK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLY+AYKKRTKNVN+DLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKIDNMVKELKDR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 315
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]
BLAST of MELO3C020824.jh1 vs. ExPASy TrEMBL
Match: A0A6J1JD37 (Pre-mRNA-splicing factor SYF2 OS=Cucurbita maxima OX=3661 GN=LOC111483944 PE=3 SV=1)

HSP 1 Score: 589 bits (1518), Expect = 8.84e-212
Identity = 296/315 (93.97%), Postives = 310/315 (98.41%), Query Frame = 0 

Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60
           MSDEGRVHPDCRNASNPYHEC+EYCFKVIA++KAR+Q+NEPVPTSSE VQAGRSSGSS+F
Sbjct: 1   MSDEGRVHPDCRNASNPYHECTEYCFKVIAEVKARNQQNEPVPTSSEGVQAGRSSGSSNF 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120
           VPPDEYEDL DEKP+EEGHSDGD DKFSG E VEGDFTKLTGRKKKLFEIRLKMNEARKA
Sbjct: 61  VPPDEYEDLRDEKPNEEGHSDGDTDKFSGGENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM+K+YMLDTQEAAE+K
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMSKAYMLDTQEAAESK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLY+AYKKRTKNVN+DLEEYNKMK+SDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKIDNMVKELKDR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 315
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]
BLAST of MELO3C020824.jh1 vs. TAIR 10
Match: AT2G16860.1 (GCIP-interacting family protein )

HSP 1 Score: 412.9 bits (1060), Expect = 2.3e-115
Identity = 217/315 (68.89%), Postives = 256/315 (81.27%), Query Frame = 0 

Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60
           M  E RVHPDC NASNPYHEC EYCFK IA+ KAR +K              +++G +  
Sbjct: 1   MVSERRVHPDCINASNPYHECVEYCFKKIAEAKARFEK--------------QNTGLAK- 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120
           V     E L D++ +E+   + + ++ + E  V  D T+LTGR+KKLFE+RLKMNEARK+
Sbjct: 61  VHEQTREPLDDKRIEEDSSEEEEEEEDNQEPQV--DVTQLTGRQKKLFELRLKMNEARKS 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180
           NQT + +EKKKME P+E++GISKQKWLE RKKKIGKLLDANGLDMT++YMLDTQEAAE+K
Sbjct: 121 NQTDVGSEKKKMEAPTETKGISKQKWLEGRKKKIGKLLDANGLDMTQAYMLDTQEAAESK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEK+P P GWDVFNQKTLYNAYKKRTKN+ +DLEEYN+M+ +DPEFYREASSLQYGK
Sbjct: 181 YKKWEKEPTPAGWDVFNQKTLYNAYKKRTKNIQVDLEEYNRMRAADPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APK S+DKID M KEL DR++KR+ FSRRRKF E+KDIDSINDRNEHFNKKIERAFG+YT
Sbjct: 241 APKTSQDKIDKMAKELLDREQKRQEFSRRRKFREEKDIDSINDRNEHFNKKIERAFGKYT 298

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 298

[Close]
BLAST of MELO3C020824.jh1 vs. TAIR 10
Match: AT4G38560.1 (Arabidopsis phospholipase-like protein (PEARLI 4) family )

HSP 1 Score: 42.4 bits (98), Expect = 8.1e-04
Identity = 16/26 (61.54%), Postives = 19/26 (73.08%), Query Frame = 0 

Query: 5  GRVHPDCRNASNPYHECSEYCFKVIA 31
          G VH DC N+ NPYHEC + CFK I+
Sbjct: 3  GIVHHDCPNSGNPYHECHDQCFKRIS 28

[Close]
BLAST of MELO3C020824.jh1 vs. TAIR 10
Match: AT4G38560.2 (Arabidopsis phospholipase-like protein (PEARLI 4) family )

HSP 1 Score: 42.4 bits (98), Expect = 8.1e-04
Identity = 16/26 (61.54%), Postives = 19/26 (73.08%), Query Frame = 0 

Query: 5  GRVHPDCRNASNPYHECSEYCFKVIA 31
          G VH DC N+ NPYHEC + CFK I+
Sbjct: 3  GIVHHDCPNSGNPYHECHDQCFKRIS 28

The following BLAST results are available for this feature:
BLAST of MELO3C020824.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008457705.16.75e-22399.68PREDICTED: pre-mRNA-splicing factor syf2 [Cucumis melo] >KAA0045744.1 pre-mRNA-s... [more]
XP_011649295.12.64e-22098.41pre-mRNA-splicing factor syf2 [Cucumis sativus] >KGN61940.1 hypothetical protein... [more]
XP_038900868.12.51e-21396.19pre-mRNA-splicing factor syf2 [Benincasa hispida][more]
XP_022943827.16.37e-21294.29pre-mRNA-splicing factor syf2-like [Cucurbita moschata] >XP_022943828.1 pre-mRNA... [more]
XP_022986094.11.83e-21193.97pre-mRNA-splicing factor syf2-like [Cucurbita maxima] >XP_022986095.1 pre-mRNA-s... [more]
BLAST of MELO3C020824.jh1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8AVQ61.3e-2538.81Pre-mRNA-splicing factor syf2 OS=Xenopus laevis OX=8355 GN=syf2 PE=2 SV=1[more]
Q28G053.6e-2538.36Pre-mRNA-splicing factor syf2 OS=Xenopus tropicalis OX=8364 GN=syf2 PE=2 SV=1[more]
Q6DGP21.5e-2337.12Pre-mRNA-splicing factor syf2 OS=Danio rerio OX=7955 GN=syf2 PE=2 SV=1[more]
Q6DV012.0e-2337.67Pre-mRNA-splicing factor syf2 OS=Gekko japonicus OX=146911 GN=syf2 PE=2 SV=1[more]
Q9D1982.6e-2338.60Pre-mRNA-splicing factor SYF2 OS=Mus musculus OX=10090 GN=Syf2 PE=2 SV=1[more]
BLAST of MELO3C020824.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TRR33.27e-22399.68Pre-mRNA-splicing factor SYF2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more]
A0A1S3C6T53.27e-22399.68Pre-mRNA-splicing factor SYF2 OS=Cucumis melo OX=3656 GN=LOC103497339 PE=3 SV=1[more]
A0A0A0LJ811.28e-22098.41Pre-mRNA-splicing factor SYF2 OS=Cucumis sativus OX=3659 GN=Csa_2G270830 PE=3 SV... [more]
A0A6J1FXE93.08e-21294.29Pre-mRNA-splicing factor SYF2 OS=Cucurbita moschata OX=3662 GN=LOC111448448 PE=3... [more]
A0A6J1JD378.84e-21293.97Pre-mRNA-splicing factor SYF2 OS=Cucurbita maxima OX=3661 GN=LOC111483944 PE=3 S... [more]
BLAST of MELO3C020824.jh1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G16860.12.3e-11568.89GCIP-interacting family protein [more]
AT4G38560.18.1e-0461.54Arabidopsis phospholipase-like protein (PEARLI 4) family [more]
AT4G38560.28.1e-0461.54Arabidopsis phospholipase-like protein (PEARLI 4) family [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013260mRNA splicing factor SYF2PFAMPF08231SYF2coord: 156..303
e-value: 9.5E-35
score: 120.4
IPR013260mRNA splicing factor SYF2PANTHERPTHR13264GCIP-INTERACTING PROTEIN P29coord: 1..310
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..85
NoneNo IPR availablePANTHERPTHR13264:SF5PRE-MRNA-SPLICING FACTOR SYF2coord: 1..310

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020824.jh1.t1MELO3C020824.jh1.t1mRNA
MELO3C020824.jh1.t2MELO3C020824.jh1.t2mRNA