MELO3C020745 (gene) Melon (DHL92) v4

Overview


Name	MELO3C020745
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr08: 9518796 .. 9519538 (-)
RNA-Seq Expression	MELO3C020745
Synteny	MELO3C020745

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTGCACACGAGAAGGAAGAAGAAGAAAAAAAAAACAAAGAAGAAAGAAACCTTTAAGAAACTCTCTCTTTTTTTGGGTAAAAGTTAGGGTTTTTGAGGTTTGTGGTCAGCCATGGCTGGGCTCCAATACAACTTCTTTCCCACTGATCTCCTTTACCCTAAACCATCTTCTTCTTCTTCTTCCTCAGAAGCCATTAATAGGGCAAGTGTGACCTTCAAAACCACTCTAAGAGGCAATAAAGGTGAAGAAGATATTGATCATGGTGATGAGCGCAAGAGTCGTTTGTTCTCCCAAAAGGTTGCTGATAGATCACCATTGATTCTCAAGCATCAAAGCAAGAGTACTTCTTCAACTTTCTAAACATTCAACCCCGTGATCATCAATTGGTTTATCATGGGCTCTTCCCTTCAAAAGAAAAAAAAAAGCTTTTATTTTTTCTTATTTTCCCTCTTTGATTATTTTGTTTCTCCATGGAAGTACTTCGTGGTTTTTCTTAGTAGTTTGGAAAGTATGTATAGTTTGTACTATGAGTATGTGAATAAGTTTCATTCTCTATATAGTGGTAAGGAGGATGTTTCTGTTTCTATTGCCATTTTGGAGTAGATTGTTCTCGAGCCTTTTTGAATTGCAGATTGGTTGTACGATCAACCTGAGTCATATAAAAAATATTTACAAAATATAATAAATTTACAGAAATGATAGATATTAATTTACATTATAAGATAAGTTTTTATTAATGTTT

mRNA sequence

ACTGCACACGAGAAGGAAGAAGAAGAAAAAAAAAACAAAGAAGAAAGAAACCTTTAAGAAACTCTCTCTTTTTTTGGGTAAAAGTTAGGGTTTTTGAGGTTTGTGGTCAGCCATGGCTGGGCTCCAATACAACTTCTTTCCCACTGATCTCCTTTACCCTAAACCATCTTCTTCTTCTTCTTCCTCAGAAGCCATTAATAGGGCAAGTGTGACCTTCAAAACCACTCTAAGAGGCAATAAAGGTGAAGAAGATATTGATCATGGTGATGAGCGCAAGAGTCGTTTGTTCTCCCAAAAGGTTGCTGATAGATCACCATTGATTCTCAAGCATCAAAGCAAGAGTACTTCTTCAACTTTCTAAACATTCAACCCCGTGATCATCAATTGGTTTATCATGGGCTCTTCCCTTCAAAAGAAAAAAAAAAGCTTTTATTTTTTCTTATTTTCCCTCTTTGATTATTTTGTTTCTCCATGGAAGTACTTCGTGGTTTTTCTTAGTAGTTTGGAAAGTATGTATAGTTTGTACTATGAGTATGTGAATAAGTTTCATTCTCTATATAGTGGTAAGGAGGATGTTTCTGTTTCTATTGCCATTTTGGAGTAGATTGTTCTCGAGCCTTTTTGAATTGCAGATTGGTTGTACGATCAACCTGAGTCATATAAAAAATATTTACAAAATATAATAAATTTACAGAAATGATAGATATTAATTTACATTATAAGATAAGTTTTTATTAATGTTT

Coding sequence (CDS)

ATGGCTGGGCTCCAATACAACTTCTTTCCCACTGATCTCCTTTACCCTAAACCATCTTCTTCTTCTTCTTCCTCAGAAGCCATTAATAGGGCAAGTGTGACCTTCAAAACCACTCTAAGAGGCAATAAAGGTGAAGAAGATATTGATCATGGTGATGAGCGCAAGAGTCGTTTGTTCTCCCAAAAGGTTGCTGATAGATCACCATTGATTCTCAAGCATCAAAGCAAGAGTACTTCTTCAACTTTCTAA

Protein sequence

MAGLQYNFFPTDLLYPKPSSSSSSSEAINRASVTFKTTLRGNKGEEDIDHGDERKSRLFSQKVADRSPLILKHQSKSTSSTF

Homology

[Close]

BLAST of MELO3C020745 vs. NCBI nr
Match: ADN34001.1 (hypothetical protein [Cucumis melo subsp. melo] >KAA0063834.1 hypothetical protein E6C27_scaffold827G00560 [Cucumis melo var. makuwa] >TYK28218.1 hypothetical protein E5676_scaffold258G00320 [Cucumis melo var. makuwa])

HSP 1 Score: 160.2 bits (404), Expect = 7.4e-36
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MAGLQYNFFPTDLLYPKPSSSSSSSEAINRASVTFKTTLRGNKGEEDIDHGDERKSRLFS 60
          MAGLQYNFFPTDLLYPKPSSSSSSSEAINRASVTFKTTLRGNKGEEDIDHGDERKSRLFS
Sbjct: 1  MAGLQYNFFPTDLLYPKPSSSSSSSEAINRASVTFKTTLRGNKGEEDIDHGDERKSRLFS 60

Query: 61 QKVADRSPLILKHQSKSTSSTF 83
          QKVADRSPLILKHQSKSTSSTF
Sbjct: 61 QKVADRSPLILKHQSKSTSSTF 82

[Close]

BLAST of MELO3C020745 vs. NCBI nr
Match: KGN53975.1 (hypothetical protein Csa_018873 [Cucumis sativus])

HSP 1 Score: 131.3 bits (329), Expect = 3.7e-27
Identity = 70/82 (85.37%), Postives = 73/82 (89.02%), Query Frame = 0


Query: 1  MAGLQYNFFPTDLLYPKPSSSSSSSEAINRASVTFKTTLRGNKG-EEDIDHGDERKSRLF 60
          MAGLQYNFFPTDLLYPKPSSSSSSSEAINRASVTFKT LRGNKG +EDIDHGDE KSRL 
Sbjct: 1  MAGLQYNFFPTDLLYPKPSSSSSSSEAINRASVTFKTPLRGNKGDQEDIDHGDEPKSRLM 60

Query: 61 SQKVADRSPLILKHQSKSTSST 82
            +  DRSPLILKHQ KSTSS+
Sbjct: 61 ISQKVDRSPLILKHQIKSTSSS 82

[Close]

BLAST of MELO3C020745 vs. NCBI nr
Match: KAG6603410.1 (hypothetical protein SDJN03_04019, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 103.2 bits (256), Expect = 1.1e-18
Identity = 62/88 (70.45%), Postives = 67/88 (76.14%), Query Frame = 0


Query: 1  MAGLQYNFFPTDLLYPKP-------SSSSSSSEAINRASVTFKTTLRGNKGEEDIDHGDE 60
          MAGLQYNFFPTDLLYPKP       SSSSSSS+AINRASVTFK  +RGN+ EED DHGD 
Sbjct: 1  MAGLQYNFFPTDLLYPKPSSSSSSSSSSSSSSDAINRASVTFKKPVRGNQDEED-DHGDG 60

Query: 61 RKSRLFSQKVADRSPLILKHQSKSTSST 82
           KS   S +  DRSPLILKHQ K+ SST
Sbjct: 61 AKS--LSIQKGDRSPLILKHQVKNDSST 85

[Close]

BLAST of MELO3C020745 vs. ExPASy TrEMBL
Match: A0A5A7V9D3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold258G00320 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.6e-36
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MAGLQYNFFPTDLLYPKPSSSSSSSEAINRASVTFKTTLRGNKGEEDIDHGDERKSRLFS 60
          MAGLQYNFFPTDLLYPKPSSSSSSSEAINRASVTFKTTLRGNKGEEDIDHGDERKSRLFS
Sbjct: 1  MAGLQYNFFPTDLLYPKPSSSSSSSEAINRASVTFKTTLRGNKGEEDIDHGDERKSRLFS 60

Query: 61 QKVADRSPLILKHQSKSTSSTF 83
          QKVADRSPLILKHQSKSTSSTF
Sbjct: 61 QKVADRSPLILKHQSKSTSSTF 82

[Close]

BLAST of MELO3C020745 vs. ExPASy TrEMBL
Match: E5GC02 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.6e-36
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MAGLQYNFFPTDLLYPKPSSSSSSSEAINRASVTFKTTLRGNKGEEDIDHGDERKSRLFS 60
          MAGLQYNFFPTDLLYPKPSSSSSSSEAINRASVTFKTTLRGNKGEEDIDHGDERKSRLFS
Sbjct: 1  MAGLQYNFFPTDLLYPKPSSSSSSSEAINRASVTFKTTLRGNKGEEDIDHGDERKSRLFS 60

Query: 61 QKVADRSPLILKHQSKSTSSTF 83
          QKVADRSPLILKHQSKSTSSTF
Sbjct: 61 QKVADRSPLILKHQSKSTSSTF 82

[Close]

BLAST of MELO3C020745 vs. ExPASy TrEMBL
Match: A0A0A0KWJ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G218340 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.8e-27
Identity = 70/82 (85.37%), Postives = 73/82 (89.02%), Query Frame = 0


Query: 1  MAGLQYNFFPTDLLYPKPSSSSSSSEAINRASVTFKTTLRGNKG-EEDIDHGDERKSRLF 60
          MAGLQYNFFPTDLLYPKPSSSSSSSEAINRASVTFKT LRGNKG +EDIDHGDE KSRL 
Sbjct: 1  MAGLQYNFFPTDLLYPKPSSSSSSSEAINRASVTFKTPLRGNKGDQEDIDHGDEPKSRLM 60

Query: 61 SQKVADRSPLILKHQSKSTSST 82
            +  DRSPLILKHQ KSTSS+
Sbjct: 61 ISQKVDRSPLILKHQIKSTSSS 82

The following BLAST results are available for this feature:

BLAST of MELO3C020745 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN34001.1	7.4e-36	100.00	hypothetical protein [Cucumis melo subsp. melo] >KAA0063834.1 hypothetical prote...	[more]
KGN53975.1	3.7e-27	85.37	hypothetical protein Csa_018873 [Cucumis sativus]	[more]
KAG6603410.1	1.1e-18	70.45	hypothetical protein SDJN03_04019, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MELO3C020745 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C020745 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V9D3	3.6e-36	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
E5GC02	3.6e-36	100.00	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A0A0KWJ2	1.8e-27	85.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G218340 PE=4 SV=1	[more]

BLAST of MELO3C020745 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..61

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C020745.1	MELO3C020745.1	mRNA