MELO3C020729 (gene) Melon (DHL92) v4

Overview


Name	MELO3C020729
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Cysteine synthase
Location	chr05: 26603537 .. 26603838 (-)
RNA-Seq Expression	MELO3C020729
Synteny	MELO3C020729

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGATACAAAGTCTACAATAGCTAAAGATGTTACTGAAGTGAGCCACTGACCTTCCTCCCTCTCTTTTTCCTCAATTGAATTTCAAGGATTGTCTTAGCTTATTATTAAGAACTTTTGAATTTCCTTACATCCATTTTTCATATATTAAAATTTTCAGCTAATTGGGAATACACCACTTGTATATCTCAACCGTGTTGTTGATGGCTGCGTGGCTCGGGTAGCTGCCAAGTTGGAGATGATGGAGCCTTGCTCTAGTGTCAAAGATAGGTACTTTTTATTTTTAATTATAGTTTTTTT

mRNA sequence

ATGGTTGATACAAAGTCTACAATAGCTAAAGATGTTACTGAACTAATTGGGAATACACCACTTGTATATCTCAACCGTGTTGTTGATGGCTGCGTGGCTCGGGTAGCTGCCAAGTTGGAGATGATGGAGCCTTGCTCTAGTGTCAAAGATAGGTACTTTTTATTTTTAATTATAGTTTTTTT

Coding sequence (CDS)

ATGGTTGATACAAAGTCTACAATAGCTAAAGATGTTACTGAACTAATTGGGAATACACCACTTGTATATCTCAACCGTGTTGTTGATGGCTGCGTGGCTCGGGTAGCTGCCAAGTTGGAGATGATGGAGCCTTGCTCTAGTGTCAAAGATAGGTACTTTTTATTTTTAATTATAGTTTTT

Protein sequence

MVDTKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDRYFLFLIIVF

Homology

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BLAST of MELO3C020729 vs. NCBI nr
Match: XP_008455731.1 (PREDICTED: cysteine synthase isoform X2 [Cucumis melo] >XP_008455734.1 PREDICTED: cysteine synthase isoform X2 [Cucumis melo] >ADN33908.1 cysteine synthase [Cucumis melo subsp. melo])

HSP 1 Score: 103.6 bits (257), Expect = 6.0e-19
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0


Query: 1  MVDTKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 52
          MVDTKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR
Sbjct: 1  MVDTKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 51

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BLAST of MELO3C020729 vs. NCBI nr
Match: XP_008455725.2 (PREDICTED: cysteine synthase isoform X1 [Cucumis melo])

HSP 1 Score: 103.6 bits (257), Expect = 6.0e-19
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0


Query: 1  MVDTKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 52
          MVDTKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR
Sbjct: 21 MVDTKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 71

[Close]

BLAST of MELO3C020729 vs. NCBI nr
Match: XP_038890826.1 (cysteine synthase [Benincasa hispida] >XP_038890827.1 cysteine synthase [Benincasa hispida] >XP_038890828.1 cysteine synthase [Benincasa hispida])

HSP 1 Score: 101.7 bits (252), Expect = 2.3e-18
Identity = 50/51 (98.04%), Postives = 50/51 (98.04%), Query Frame = 0


Query: 1  MVDTKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 52
          MVD KSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR
Sbjct: 1  MVDAKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 51

[Close]

BLAST of MELO3C020729 vs. NCBI nr
Match: Q43317.1 (RecName: Full=Cysteine synthase; Short=CSase; AltName: Full=Beta-PA/CSase; AltName: Full=Beta-pyrazolylalanine synthase; AltName: Full=L-mimosine synthase; AltName: Full=O-acetylserine (thiol)-lyase; Short=OAS-TL; AltName: Full=O-acetylserine sulfhydrylase [Citrullus lanatus] >BAA05965.1 cysteine synthase [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 100.1 bits (248), Expect = 6.7e-18
Identity = 49/51 (96.08%), Postives = 49/51 (96.08%), Query Frame = 0


Query: 1  MVDTKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 52
          M D KSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR
Sbjct: 1  MADAKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 51

[Close]

BLAST of MELO3C020729 vs. NCBI nr
Match: KAG6586292.1 (hypothetical protein SDJN03_19025, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 97.8 bits (242), Expect = 3.3e-17
Identity = 48/51 (94.12%), Postives = 49/51 (96.08%), Query Frame = 0


Query: 1  MVDTKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 52
          MVD KS+IAKDVTELIG TPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR
Sbjct: 1  MVDAKSSIAKDVTELIGKTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 51

[Close]

BLAST of MELO3C020729 vs. ExPASy Swiss-Prot
Match: Q43317 (Cysteine synthase OS=Citrullus lanatus OX=3654 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 8.8e-21
Identity = 49/51 (96.08%), Postives = 49/51 (96.08%), Query Frame = 0


Query: 1  MVDTKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 52
          M D KSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR
Sbjct: 1  MADAKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 51

[Close]

BLAST of MELO3C020729 vs. ExPASy Swiss-Prot
Match: O81154 (Cysteine synthase OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 4.5e-17
Identity = 44/51 (86.27%), Postives = 44/51 (86.27%), Query Frame = 0


Query: 1  MVDTKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 52
          M   K  IAKDVTELIGNTPLVYLN VVDGCVARVAAKLE MEPCSSVKDR
Sbjct: 1  MAGEKIGIAKDVTELIGNTPLVYLNNVVDGCVARVAAKLESMEPCSSVKDR 51

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BLAST of MELO3C020729 vs. ExPASy Swiss-Prot
Match: Q9XEA6 (Cysteine synthase OS=Oryza sativa subsp. japonica OX=39947 GN=RCS1 PE=2 SV=2)

HSP 1 Score: 87.0 bits (214), Expect = 7.7e-17
Identity = 42/45 (93.33%), Postives = 42/45 (93.33%), Query Frame = 0


Query: 7  TIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 52
          TIAKDVTELIGNTPLVYLNRV DGCV RVAAKLE MEPCSSVKDR
Sbjct: 4  TIAKDVTELIGNTPLVYLNRVTDGCVGRVAAKLESMEPCSSVKDR 48

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BLAST of MELO3C020729 vs. ExPASy Swiss-Prot
Match: Q00834 (Cysteine synthase OS=Spinacia oleracea OX=3562 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.0e-16
Identity = 43/51 (84.31%), Postives = 45/51 (88.24%), Query Frame = 0


Query: 1  MVDTKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 52
          MV+ K+ IAKDVTELIG TPLVYLN V DGCVARVAAKLE MEPCSSVKDR
Sbjct: 1  MVEEKAFIAKDVTELIGKTPLVYLNTVADGCVARVAAKLEGMEPCSSVKDR 51

[Close]

BLAST of MELO3C020729 vs. ExPASy Swiss-Prot
Match: P47998 (Cysteine synthase 1 OS=Arabidopsis thaliana OX=3702 GN=OASA1 PE=1 SV=2)

HSP 1 Score: 85.1 bits (209), Expect = 2.9e-16
Identity = 41/46 (89.13%), Postives = 42/46 (91.30%), Query Frame = 0


Query: 6  STIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 52
          S IAKDVTELIGNTPLVYLN V +GCV RVAAKLEMMEPCSSVKDR
Sbjct: 3  SRIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDR 48

[Close]

BLAST of MELO3C020729 vs. ExPASy TrEMBL
Match: A0A1S3C157 (Cysteine synthase OS=Cucumis melo OX=3656 GN=LOC103495826 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.9e-19
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0


Query: 1  MVDTKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 52
          MVDTKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR
Sbjct: 1  MVDTKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 51

[Close]

BLAST of MELO3C020729 vs. ExPASy TrEMBL
Match: E5GBR6 (Cysteine synthase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.9e-19
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0


Query: 1  MVDTKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 52
          MVDTKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR
Sbjct: 1  MVDTKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 51

[Close]

BLAST of MELO3C020729 vs. ExPASy TrEMBL
Match: A0A1S3C1N8 (Cysteine synthase OS=Cucumis melo OX=3656 GN=LOC103495826 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.9e-19
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0


Query: 1  MVDTKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 52
          MVDTKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR
Sbjct: 21 MVDTKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 71

[Close]

BLAST of MELO3C020729 vs. ExPASy TrEMBL
Match: A0A6J1HPW0 (Cysteine synthase OS=Cucurbita maxima OX=3661 GN=LOC111465603 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.6e-17
Identity = 48/51 (94.12%), Postives = 49/51 (96.08%), Query Frame = 0


Query: 1  MVDTKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 52
          MVD KS+IAKDVTELIG TPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR
Sbjct: 1  MVDAKSSIAKDVTELIGKTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 51

[Close]

BLAST of MELO3C020729 vs. ExPASy TrEMBL
Match: A0A6J1FB21 (Cysteine synthase OS=Cucurbita moschata OX=3662 GN=LOC111444010 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.6e-17
Identity = 48/51 (94.12%), Postives = 49/51 (96.08%), Query Frame = 0


Query: 1  MVDTKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 52
          MVD KS+IAKDVTELIG TPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR
Sbjct: 1  MVDAKSSIAKDVTELIGKTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 51

[Close]

BLAST of MELO3C020729 vs. TAIR 10
Match: AT4G14880.1 (O-acetylserine (thiol) lyase (OAS-TL) isoform A1 )

HSP 1 Score: 85.1 bits (209), Expect = 2.1e-17
Identity = 41/46 (89.13%), Postives = 42/46 (91.30%), Query Frame = 0


Query: 6  STIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 52
          S IAKDVTELIGNTPLVYLN V +GCV RVAAKLEMMEPCSSVKDR
Sbjct: 3  SRIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDR 48

[Close]

BLAST of MELO3C020729 vs. TAIR 10
Match: AT4G14880.2 (O-acetylserine (thiol) lyase (OAS-TL) isoform A1 )

HSP 1 Score: 85.1 bits (209), Expect = 2.1e-17
Identity = 41/46 (89.13%), Postives = 42/46 (91.30%), Query Frame = 0


Query: 6  STIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 52
          S IAKDVTELIGNTPLVYLN V +GCV RVAAKLEMMEPCSSVKDR
Sbjct: 3  SRIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDR 48

[Close]

BLAST of MELO3C020729 vs. TAIR 10
Match: AT4G14880.3 (O-acetylserine (thiol) lyase (OAS-TL) isoform A1 )

HSP 1 Score: 85.1 bits (209), Expect = 2.1e-17
Identity = 41/46 (89.13%), Postives = 42/46 (91.30%), Query Frame = 0


Query: 6  STIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 52
          S IAKDVTELIGNTPLVYLN V +GCV RVAAKLEMMEPCSSVKDR
Sbjct: 3  SRIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDR 48

[Close]

BLAST of MELO3C020729 vs. TAIR 10
Match: AT4G14880.4 (O-acetylserine (thiol) lyase (OAS-TL) isoform A1 )

HSP 1 Score: 85.1 bits (209), Expect = 2.1e-17
Identity = 41/46 (89.13%), Postives = 42/46 (91.30%), Query Frame = 0


Query: 6  STIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 52
          S IAKDVTELIGNTPLVYLN V +GCV RVAAKLEMMEPCSSVKDR
Sbjct: 3  SRIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDR 48

[Close]

BLAST of MELO3C020729 vs. TAIR 10
Match: AT5G28020.1 (cysteine synthase D2 )

HSP 1 Score: 84.0 bits (206), Expect = 4.6e-17
Identity = 38/50 (76.00%), Postives = 44/50 (88.00%), Query Frame = 0


Query: 2  VDTKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 52
          ++ +  I  D+TELIGNTP+VYLN VVDGCVAR+AAKLEMMEPCSSVKDR
Sbjct: 1  MEDRCLIKNDITELIGNTPMVYLNNVVDGCVARIAAKLEMMEPCSSVKDR 50

The following BLAST results are available for this feature:

BLAST of MELO3C020729 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455731.1	6.0e-19	100.00	PREDICTED: cysteine synthase isoform X2 [Cucumis melo] >XP_008455734.1 PREDICTED...	[more]
XP_008455725.2	6.0e-19	100.00	PREDICTED: cysteine synthase isoform X1 [Cucumis melo]	[more]
XP_038890826.1	2.3e-18	98.04	cysteine synthase [Benincasa hispida] >XP_038890827.1 cysteine synthase [Beninca...	[more]
Q43317.1	6.7e-18	96.08	RecName: Full=Cysteine synthase; Short=CSase; AltName: Full=Beta-PA/CSase; AltNa...	[more]
KAG6586292.1	3.3e-17	94.12	hypothetical protein SDJN03_19025, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MELO3C020729 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43317	8.8e-21	96.08	Cysteine synthase OS=Citrullus lanatus OX=3654 PE=1 SV=1	[more]
O81154	4.5e-17	86.27	Cysteine synthase OS=Solanum tuberosum OX=4113 PE=2 SV=1	[more]
Q9XEA6	7.7e-17	93.33	Cysteine synthase OS=Oryza sativa subsp. japonica OX=39947 GN=RCS1 PE=2 SV=2	[more]
Q00834	1.0e-16	84.31	Cysteine synthase OS=Spinacia oleracea OX=3562 PE=1 SV=1	[more]
P47998	2.9e-16	89.13	Cysteine synthase 1 OS=Arabidopsis thaliana OX=3702 GN=OASA1 PE=1 SV=2	[more]

BLAST of MELO3C020729 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C157	2.9e-19	100.00	Cysteine synthase OS=Cucumis melo OX=3656 GN=LOC103495826 PE=3 SV=1	[more]
E5GBR6	2.9e-19	100.00	Cysteine synthase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A1S3C1N8	2.9e-19	100.00	Cysteine synthase OS=Cucumis melo OX=3656 GN=LOC103495826 PE=3 SV=1	[more]
A0A6J1HPW0	1.6e-17	94.12	Cysteine synthase OS=Cucurbita maxima OX=3661 GN=LOC111465603 PE=3 SV=1	[more]
A0A6J1FB21	1.6e-17	94.12	Cysteine synthase OS=Cucurbita moschata OX=3662 GN=LOC111444010 PE=3 SV=1	[more]

BLAST of MELO3C020729 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14880.1	2.1e-17	89.13	O-acetylserine (thiol) lyase (OAS-TL) isoform A1	[more]
AT4G14880.2	2.1e-17	89.13	O-acetylserine (thiol) lyase (OAS-TL) isoform A1	[more]
AT4G14880.3	2.1e-17	89.13	O-acetylserine (thiol) lyase (OAS-TL) isoform A1	[more]
AT4G14880.4	2.1e-17	89.13	O-acetylserine (thiol) lyase (OAS-TL) isoform A1	[more]
AT5G28020.1	4.6e-17	76.00	cysteine synthase D2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036052	Tryptophan synthase beta subunit-like PLP-dependent enzyme	GENE3D	3.40.50.1100		coord: 3..58 e-value: 2.5E-14 score: 55.2
IPR036052	Tryptophan synthase beta subunit-like PLP-dependent enzyme	SUPERFAMILY	53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes	coord: 8..58
None	No IPR available	PANTHER	PTHR10314:SF97	CYSTEINE SYNTHASE	coord: 1..53
None	No IPR available	PANTHER	PTHR10314	CYSTATHIONINE BETA-SYNTHASE	coord: 1..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C020729.1	MELO3C020729.1	mRNA