MELO3C020691 (gene) Melon (DHL92) v4

Overview


Name	MELO3C020691
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Zinc finger, C3HC4 type family protein
Location	chr12: 2686923 .. 2688086 (+)
RNA-Seq Expression	MELO3C020691
Synteny	MELO3C020691

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGCACCATTTAATTGTTCCACGTTGATGGCAGCAAAAGTTGGGGTGCAGTCCGGCTAGGACCGAAGGTTCTCTCTTTACTACGGCCCAATCGTGGACGCCCAGTTCCCTCCATAATCTTTCCCCAAAAAACCTTTCTTTATTTCTTTCTCCGACGGTATTCAAGCCGTGAAGCTTTATGTCACCATGATTTCCGTTCTTGCTCAGGTAACCTACCGTCTATGGTCGTACGAATTTCCGATCTGATTCGATTTCCTTGCCGTTTCTTTGATACGAATTTGATCTCACCGTTTTTCCCTTTTTGGTTGATGTCCCAAATTGAACTGCAGGAGCGACTGCTTGGTTTTGCATTGGGGAGCGCGTTCGCCGGGGTTGTTGTTTTTGAGCAACGGAAAAGCTTATACCAATCCATTTCCGAAAACTATCCACCAGCTACCCAATCTCCAGTAAGCGTAATTCCCCTTTCTTGTAACCCTAACGATAACCATTGTTTTGAGACAGTTAGGATGGCATTGCATTGAAAAATGTATGAAAATGTAAATCTTTGAAATTTGGATGTTTTGGTTTAAGGGGGAGAAGAGAATGAAATTATCAAAATTTTCAATAATGCAATTGCTAAATTAGTGTTATATATGTCTGAAAAGTGTATTAACCTATAAATTATATACTTTTTTTTGTGTGCTTACTTTCTTATATCAATATAAATATTTTTTTTTTCAATTCTTGCTAATTTATTTTTCTATTTAAAAGTTGAGAAATACATATCTTGTGAAATATGTATAATTCCTTTTCTGAATTTTATACTTCCATCTAGCTACTAATCCATTAATTTAATATCATTCTCATTGAAACTACTTTAGATGAGAAAACCTGTACTAGCAAAGAAGTATGGCCCAGAGTTTTCTCACCTATGGAATAGAGCTGTAGACCAGACGTTTGGACCCATGATTCAGGCACTCAGTTCACGGGGATGGTGATATGTTGAGAATGGTTTCTTTCATCAATGTATCTAATATCAATTTGTGAAACATGTAAGGAAACATAATTTTAAATTTACTAGTTTTAACATTCTGGATTTTCAAAGAATTGATGTTATGACCGTGAATCAAACTCCAAATCCATGAGCTTTAGGCCTTTAAAGCAATAAAACTGTTCTTTTTCTTA

mRNA sequence

GTGGCACCATTTAATTGTTCCACGTTGATGGCAGCAAAAGTTGGGGTGCAGTCCGGCTAGGACCGAAGGTTCTCTCTTTACTACGGCCCAATCGTGGACGCCCAGTTCCCTCCATAATCTTTCCCCAAAAAACCTTTCTTTATTTCTTTCTCCGACGGTATTCAAGCCGTGAAGCTTTATGTCACCATGATTTCCGTTCTTGCTCAGGAGCGACTGCTTGGTTTTGCATTGGGGAGCGCGTTCGCCGGGGTTGTTGTTTTTGAGCAACGGAAAAGCTTATACCAATCCATTTCCGAAAACTATCCACCAGCTACCCAATCTCCAGTAAGCATGAGAAAACCTGTACTAGCAAAGAAGTATGGCCCAGAGTTTTCTCACCTATGGAATAGAGCTGTAGACCAGACGTTTGGACCCATGATTCAGGCACTCAGTTCACGGGGATGGTGATATGTTGAGAATGGTTTCTTTCATCAATGTATCTAATATCAATTTGTGAAACATGTAAGGAAACATAATTTTAAATTTACTAGTTTTAACATTCTGGATTTTCAAAGAATTGATGTTATGACCGTGAATCAAACTCCAAATCCATGAGCTTTAGGCCTTTAAAGCAATAAAACTGTTCTTTTTCTTA

Coding sequence (CDS)

ATGATTTCCGTTCTTGCTCAGGAGCGACTGCTTGGTTTTGCATTGGGGAGCGCGTTCGCCGGGGTTGTTGTTTTTGAGCAACGGAAAAGCTTATACCAATCCATTTCCGAAAACTATCCACCAGCTACCCAATCTCCAGTAAGCATGAGAAAACCTGTACTAGCAAAGAAGTATGGCCCAGAGTTTTCTCACCTATGGAATAGAGCTGTAGACCAGACGTTTGGACCCATGATTCAGGCACTCAGTTCACGGGGATGGTGA

Protein sequence

MISVLAQERLLGFALGSAFAGVVVFEQRKSLYQSISENYPPATQSPVSMRKPVLAKKYGPEFSHLWNRAVDQTFGPMIQALSSRGW

Homology

[Close]

BLAST of MELO3C020691 vs. NCBI nr
Match: XP_008457525.1 (PREDICTED: uncharacterized protein LOC103497197 isoform X1 [Cucumis melo])

HSP 1 Score: 174.5 bits (441), Expect = 4.0e-40
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1  MISVLAQERLLGFALGSAFAGVVVFEQRKSLYQSISENYPPATQSPVSMRKPVLAKKYGP 60
          MISVLAQERLLGFALGSAFAGVVVFEQRKSLYQSISENYPPATQSPVSMRKPVLAKKYGP
Sbjct: 1  MISVLAQERLLGFALGSAFAGVVVFEQRKSLYQSISENYPPATQSPVSMRKPVLAKKYGP 60

Query: 61 EFSHLWNRAVDQTFGPMIQALSSRGW 87
          EFSHLWNRAVDQTFGPMIQALSSRGW
Sbjct: 61 EFSHLWNRAVDQTFGPMIQALSSRGW 86

[Close]

BLAST of MELO3C020691 vs. NCBI nr
Match: KGN66041.2 (hypothetical protein Csa_019677 [Cucumis sativus])

HSP 1 Score: 171.4 bits (433), Expect = 3.4e-39
Identity = 84/86 (97.67%), Postives = 85/86 (98.84%), Query Frame = 0


Query: 1   MISVLAQERLLGFALGSAFAGVVVFEQRKSLYQSISENYPPATQSPVSMRKPVLAKKYGP 60
           MISVLAQERLLGFALGS FAGVVVFEQRKSLYQSISENYPPATQSPVSMRKPVLAKKYGP
Sbjct: 54  MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSPVSMRKPVLAKKYGP 113

Query: 61  EFSHLWNRAVDQTFGPMIQALSSRGW 87
           EFSHLWNRAVDQTFGP+IQALSSRGW
Sbjct: 114 EFSHLWNRAVDQTFGPVIQALSSRGW 139

[Close]

BLAST of MELO3C020691 vs. NCBI nr
Match: XP_011657967.1 (uncharacterized protein LOC101206005 isoform X1 [Cucumis sativus])

HSP 1 Score: 171.4 bits (433), Expect = 3.4e-39
Identity = 84/86 (97.67%), Postives = 85/86 (98.84%), Query Frame = 0


Query: 1  MISVLAQERLLGFALGSAFAGVVVFEQRKSLYQSISENYPPATQSPVSMRKPVLAKKYGP 60
          MISVLAQERLLGFALGS FAGVVVFEQRKSLYQSISENYPPATQSPVSMRKPVLAKKYGP
Sbjct: 1  MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSPVSMRKPVLAKKYGP 60

Query: 61 EFSHLWNRAVDQTFGPMIQALSSRGW 87
          EFSHLWNRAVDQTFGP+IQALSSRGW
Sbjct: 61 EFSHLWNRAVDQTFGPVIQALSSRGW 86

[Close]

BLAST of MELO3C020691 vs. NCBI nr
Match: XP_008457526.1 (PREDICTED: uncharacterized protein LOC103497197 isoform X2 [Cucumis melo] >KAA0033888.1 uncharacterized protein E6C27_scaffold43059G00730 [Cucumis melo var. makuwa] >TYK01272.1 uncharacterized protein E5676_scaffold49G00590 [Cucumis melo var. makuwa])

HSP 1 Score: 166.4 bits (420), Expect = 1.1e-37
Identity = 84/86 (97.67%), Postives = 84/86 (97.67%), Query Frame = 0


Query: 1  MISVLAQERLLGFALGSAFAGVVVFEQRKSLYQSISENYPPATQSPVSMRKPVLAKKYGP 60
          MISVLAQERLLGFALGSAFAGVVVFEQRKSLYQSISENYPPATQSP  MRKPVLAKKYGP
Sbjct: 1  MISVLAQERLLGFALGSAFAGVVVFEQRKSLYQSISENYPPATQSP--MRKPVLAKKYGP 60

Query: 61 EFSHLWNRAVDQTFGPMIQALSSRGW 87
          EFSHLWNRAVDQTFGPMIQALSSRGW
Sbjct: 61 EFSHLWNRAVDQTFGPMIQALSSRGW 84

[Close]

BLAST of MELO3C020691 vs. NCBI nr
Match: XP_004152895.1 (uncharacterized protein LOC101206005 isoform X2 [Cucumis sativus])

HSP 1 Score: 163.3 bits (412), Expect = 9.2e-37
Identity = 82/86 (95.35%), Postives = 83/86 (96.51%), Query Frame = 0


Query: 1  MISVLAQERLLGFALGSAFAGVVVFEQRKSLYQSISENYPPATQSPVSMRKPVLAKKYGP 60
          MISVLAQERLLGFALGS FAGVVVFEQRKSLYQSISENYPPATQSP  MRKPVLAKKYGP
Sbjct: 1  MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSP--MRKPVLAKKYGP 60

Query: 61 EFSHLWNRAVDQTFGPMIQALSSRGW 87
          EFSHLWNRAVDQTFGP+IQALSSRGW
Sbjct: 61 EFSHLWNRAVDQTFGPVIQALSSRGW 84

[Close]

BLAST of MELO3C020691 vs. ExPASy TrEMBL
Match: A0A1S3C5V0 (uncharacterized protein LOC103497197 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497197 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.9e-40
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1  MISVLAQERLLGFALGSAFAGVVVFEQRKSLYQSISENYPPATQSPVSMRKPVLAKKYGP 60
          MISVLAQERLLGFALGSAFAGVVVFEQRKSLYQSISENYPPATQSPVSMRKPVLAKKYGP
Sbjct: 1  MISVLAQERLLGFALGSAFAGVVVFEQRKSLYQSISENYPPATQSPVSMRKPVLAKKYGP 60

Query: 61 EFSHLWNRAVDQTFGPMIQALSSRGW 87
          EFSHLWNRAVDQTFGPMIQALSSRGW
Sbjct: 61 EFSHLWNRAVDQTFGPMIQALSSRGW 86

[Close]

BLAST of MELO3C020691 vs. ExPASy TrEMBL
Match: A0A5D3BR76 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00590 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 5.3e-38
Identity = 84/86 (97.67%), Postives = 84/86 (97.67%), Query Frame = 0


Query: 1  MISVLAQERLLGFALGSAFAGVVVFEQRKSLYQSISENYPPATQSPVSMRKPVLAKKYGP 60
          MISVLAQERLLGFALGSAFAGVVVFEQRKSLYQSISENYPPATQSP  MRKPVLAKKYGP
Sbjct: 1  MISVLAQERLLGFALGSAFAGVVVFEQRKSLYQSISENYPPATQSP--MRKPVLAKKYGP 60

Query: 61 EFSHLWNRAVDQTFGPMIQALSSRGW 87
          EFSHLWNRAVDQTFGPMIQALSSRGW
Sbjct: 61 EFSHLWNRAVDQTFGPMIQALSSRGW 84

[Close]

BLAST of MELO3C020691 vs. ExPASy TrEMBL
Match: A0A1S3C5P6 (uncharacterized protein LOC103497197 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497197 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 5.3e-38
Identity = 84/86 (97.67%), Postives = 84/86 (97.67%), Query Frame = 0


Query: 1  MISVLAQERLLGFALGSAFAGVVVFEQRKSLYQSISENYPPATQSPVSMRKPVLAKKYGP 60
          MISVLAQERLLGFALGSAFAGVVVFEQRKSLYQSISENYPPATQSP  MRKPVLAKKYGP
Sbjct: 1  MISVLAQERLLGFALGSAFAGVVVFEQRKSLYQSISENYPPATQSP--MRKPVLAKKYGP 60

Query: 61 EFSHLWNRAVDQTFGPMIQALSSRGW 87
          EFSHLWNRAVDQTFGPMIQALSSRGW
Sbjct: 61 EFSHLWNRAVDQTFGPMIQALSSRGW 84

[Close]

BLAST of MELO3C020691 vs. ExPASy TrEMBL
Match: A0A0A0LXB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G495270 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 4.5e-37
Identity = 82/86 (95.35%), Postives = 83/86 (96.51%), Query Frame = 0


Query: 1   MISVLAQERLLGFALGSAFAGVVVFEQRKSLYQSISENYPPATQSPVSMRKPVLAKKYGP 60
           MISVLAQERLLGFALGS FAGVVVFEQRKSLYQSISENYPPATQSP  MRKPVLAKKYGP
Sbjct: 54  MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSP--MRKPVLAKKYGP 113

Query: 61  EFSHLWNRAVDQTFGPMIQALSSRGW 87
           EFSHLWNRAVDQTFGP+IQALSSRGW
Sbjct: 114 EFSHLWNRAVDQTFGPVIQALSSRGW 137

[Close]

BLAST of MELO3C020691 vs. ExPASy TrEMBL
Match: A0A6J1DSC3 (uncharacterized protein LOC111023455 OS=Momordica charantia OX=3673 GN=LOC111023455 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.7e-34
Identity = 77/86 (89.53%), Postives = 80/86 (93.02%), Query Frame = 0


Query: 1  MISVLAQERLLGFALGSAFAGVVVFEQRKSLYQSISENYPPATQSPVSMRKPVLAKKYGP 60
          MIS+LAQERLLG ALGS FAGVVVFEQRKSLY+SISENYPPA QSP  MRKPV+AKKYGP
Sbjct: 1  MISILAQERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPANQSP--MRKPVVAKKYGP 60

Query: 61 EFSHLWNRAVDQTFGPMIQALSSRGW 87
          E SHLWNRAVDQTFGPMIQALSSRGW
Sbjct: 61 EVSHLWNRAVDQTFGPMIQALSSRGW 84

[Close]

BLAST of MELO3C020691 vs. TAIR 10
Match: AT2G28430.1 (unknown protein; Has 28 Blast hits to 28 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 91.7 bits (226), Expect = 3.2e-19
Identity = 48/88 (54.55%), Postives = 61/88 (69.32%), Query Frame = 0


Query: 1  MISVLAQERLLGFALGSAFAGVVVFEQRKSLYQSISENYPPATQS--PVSMRKPVLAKKY 60
          MIS+LAQERLLG+ LGSA  G +VFEQRK ++ S+S+   P +QS     +   +  KKY
Sbjct: 1  MISILAQERLLGYTLGSALTGFIVFEQRKLIHDSVSD---PKSQSIDQAQVSDRIFGKKY 60

Query: 61 GPEFSHLWNRAVDQTFGPMIQALSSRGW 87
            EF+ LWN+AVDQTF P I+ LSSR W
Sbjct: 61 RMEFASLWNKAVDQTFEPAIEYLSSRKW 85

The following BLAST results are available for this feature:

BLAST of MELO3C020691 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C020691 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457525.1	4.0e-40	100.00	PREDICTED: uncharacterized protein LOC103497197 isoform X1 [Cucumis melo]	[more]
KGN66041.2	3.4e-39	97.67	hypothetical protein Csa_019677 [Cucumis sativus]	[more]
XP_011657967.1	3.4e-39	97.67	uncharacterized protein LOC101206005 isoform X1 [Cucumis sativus]	[more]
XP_008457526.1	1.1e-37	97.67	PREDICTED: uncharacterized protein LOC103497197 isoform X2 [Cucumis melo] >KAA00...	[more]
XP_004152895.1	9.2e-37	95.35	uncharacterized protein LOC101206005 isoform X2 [Cucumis sativus]	[more]

BLAST of MELO3C020691 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C5V0	1.9e-40	100.00	uncharacterized protein LOC103497197 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3BR76	5.3e-38	97.67	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C5P6	5.3e-38	97.67	uncharacterized protein LOC103497197 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LXB2	4.5e-37	95.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G495270 PE=4 SV=1	[more]
A0A6J1DSC3	2.7e-34	89.53	uncharacterized protein LOC111023455 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]

BLAST of MELO3C020691 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28430.1	3.2e-19	54.55	unknown protein; Has 28 Blast hits to 28 proteins in 12 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37720	OS10G0481400 PROTEIN	coord: 1..86
None	No IPR available	PANTHER	PTHR37720:SF2	OS10G0481400 PROTEIN	coord: 1..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C020691.1	MELO3C020691.1	mRNA