MELO3C020634 (gene) Melon (DHL92) v4

Overview


Name	MELO3C020634
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	RING-type E3 ubiquitin transferase
Location	chr12: 1731973 .. 1732422 (+)
RNA-Seq Expression	MELO3C020634
Synteny	MELO3C020634

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATTCTTGTTCGTGAGCGTCGTTTGTATCATTTTAATCATCTTCCTTTTTCATATCTACCATTACCGCCTTAGGCTTAACCAAACAAGAACCCTAGACATCGAGCAACGACTCCACGAACACCGTACAATGCAACTCCTTGCTCAAACTCAAGCCGAAATCATAAGGCAACGGCAGACTACGACGCAATCGAATGACACCACGGAAGGCGAGGAAACTTCTTCTGCTGTCATGAAGGTCGCTTACAAAGTGAAGGATAATGAAGCCGGCGGGTCGTACTGTTGTTGTGCCATATGCATTGAAGAGTTTGAGGATGAAGAGATTTGTGGAGTTGTTGAGAGTTGTGGCCATTGTTTTCATGAGGATTGTATGGATCAGTGGCTTAGGATTGAGAGCCGTTGCCCATTATGTCGTTGTTTGGTTCATGCTGTATCTCAACAATATTAG

mRNA sequence

ATGGGATTCTTGTTCGTGAGCGTCGTTTGTATCATTTTAATCATCTTCCTTTTTCATATCTACCATTACCGCCTTAGGCTTAACCAAACAAGAACCCTAGACATCGAGCAACGACTCCACGAACACCGTACAATGCAACTCCTTGCTCAAACTCAAGCCGAAATCATAAGGCAACGGCAGACTACGACGCAATCGAATGACACCACGGAAGGCGAGGAAACTTCTTCTGCTGTCATGAAGGTCGCTTACAAAGTGAAGGATAATGAAGCCGGCGGGTCGTACTGTTGTTGTGCCATATGCATTGAAGAGTTTGAGGATGAAGAGATTTGTGGAGTTGTTGAGAGTTGTGGCCATTGTTTTCATGAGGATTGTATGGATCAGTGGCTTAGGATTGAGAGCCGTTGCCCATTATGTCGTTGTTTGGTTCATGCTGTATCTCAACAATATTAG

Coding sequence (CDS)

ATGGGATTCTTGTTCGTGAGCGTCGTTTGTATCATTTTAATCATCTTCCTTTTTCATATCTACCATTACCGCCTTAGGCTTAACCAAACAAGAACCCTAGACATCGAGCAACGACTCCACGAACACCGTACAATGCAACTCCTTGCTCAAACTCAAGCCGAAATCATAAGGCAACGGCAGACTACGACGCAATCGAATGACACCACGGAAGGCGAGGAAACTTCTTCTGCTGTCATGAAGGTCGCTTACAAAGTGAAGGATAATGAAGCCGGCGGGTCGTACTGTTGTTGTGCCATATGCATTGAAGAGTTTGAGGATGAAGAGATTTGTGGAGTTGTTGAGAGTTGTGGCCATTGTTTTCATGAGGATTGTATGGATCAGTGGCTTAGGATTGAGAGCCGTTGCCCATTATGTCGTTGTTTGGTTCATGCTGTATCTCAACAATATTAG

Protein sequence

MGFLFVSVVCIILIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY

Homology

[Close]

BLAST of MELO3C020634 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 6.6e-09
Identity = 28/81 (34.57%), Postives = 44/81 (54.32%), Query Frame = 0


Query: 68  TTEGEETSSAVMK--VAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCM 127
           +T G+  + +++K    YK K  +       C++C+ EFE+ E   ++  C H FH  C+
Sbjct: 111 STNGDGLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCI 170

Query: 128 DQWLRIESRCPLCRCLVHAVS 147
           D WL+  S CPLCR  V  V+
Sbjct: 171 DTWLKSHSNCPLCRAFVTGVN 191

[Close]

BLAST of MELO3C020634 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.9e-08
Identity = 22/46 (47.83%), Postives = 32/46 (69.57%), Query Frame = 0


Query: 97  CAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV 143
           C++C+ EF+DEE   ++ +C H FH DC+D WL+  + CPLCR  V
Sbjct: 138 CSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRV 183

[Close]

BLAST of MELO3C020634 vs. ExPASy Swiss-Prot
Match: O22255 (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.9e-08
Identity = 23/46 (50.00%), Postives = 31/46 (67.39%), Query Frame = 0


Query: 97  CAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV 143
           C++C+ EFE+E+   ++  CGH FH DC+D W R  S CPLCR  V
Sbjct: 108 CSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPV 153

[Close]

BLAST of MELO3C020634 vs. ExPASy Swiss-Prot
Match: Q9C7I1 (RING-H2 finger protein ATL34 OS=Arabidopsis thaliana OX=3702 GN=ATL34 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.3e-08
Identity = 26/56 (46.43%), Postives = 33/56 (58.93%), Query Frame = 0


Query: 84  KVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCR 140
           +VK  + G     CAIC+ EFEDEE   ++  C H FH  C+D WL   S CP+CR
Sbjct: 115 QVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCR 170

[Close]

BLAST of MELO3C020634 vs. ExPASy Swiss-Prot
Match: Q8W571 (RING-H2 finger protein ATL32 OS=Arabidopsis thaliana OX=3702 GN=ATL32 PE=2 SV=3)

HSP 1 Score: 59.3 bits (142), Expect = 4.3e-08
Identity = 26/64 (40.62%), Postives = 37/64 (57.81%), Query Frame = 0


Query: 85  VKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHA 144
           VK+++ G     CAIC+ E ED E   ++  C H FH DC+D WL   + CP+CR  + A
Sbjct: 112 VKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNLTA 171

Query: 145 VSQQ 149
            S +
Sbjct: 172 KSNK 175

[Close]

BLAST of MELO3C020634 vs. NCBI nr
Match: TYJ97407.1 (RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa])

HSP 1 Score: 298.1 bits (762), Expect = 4.2e-77
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MGFLFVSVVCIILIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQ 60
           MGFLFVSVVCIILIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQ
Sbjct: 1   MGFLFVSVVCIILIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQ 60

Query: 61  TTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCF 120
           TTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCF
Sbjct: 61  TTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCF 120

Query: 121 HEDCMDQWLRIESRCPLCRCLVHAVSQQY 150
           HEDCMDQWLRIESRCPLCRCLVHAVSQQY
Sbjct: 121 HEDCMDQWLRIESRCPLCRCLVHAVSQQY 149

[Close]

BLAST of MELO3C020634 vs. NCBI nr
Match: KAA0067736.1 (RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa])

HSP 1 Score: 295.8 bits (756), Expect = 2.1e-76
Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 1   MGFLFVSVVCIILIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQ 60
           MGFLFVSVVCIILIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQ
Sbjct: 1   MGFLFVSVVCIILIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQ 60

Query: 61  TTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCF 120
           TTTQSNDTTEGEETSSAVM VAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCF
Sbjct: 61  TTTQSNDTTEGEETSSAVMTVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCF 120

Query: 121 HEDCMDQWLRIESRCPLCRCLVHAVSQQY 150
           HEDCMDQWLRIESRCPLCRCLVHAVSQQY
Sbjct: 121 HEDCMDQWLRIESRCPLCRCLVHAVSQQY 149

[Close]

BLAST of MELO3C020634 vs. NCBI nr
Match: XP_016902103.1 (PREDICTED: RING-H2 finger protein ATL52-like [Cucumis melo])

HSP 1 Score: 218.8 bits (556), Expect = 3.2e-53
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 45  MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAICIEEF 104
           MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAICIEEF
Sbjct: 1   MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAICIEEF 60

Query: 105 EDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY 150
           EDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY
Sbjct: 61  EDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY 105

[Close]

BLAST of MELO3C020634 vs. NCBI nr
Match: XP_023520574.1 (RING-H2 finger protein ATL64-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 137.5 bits (345), Expect = 9.4e-29
Identity = 80/152 (52.63%), Postives = 102/152 (67.11%), Query Frame = 0


Query: 1   MGFLFVSVVCII--LIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQ 60
           MG + +S + II  L IF+F  YH R   NQTR LD+EQ  H  R   L A+ +AE++R+
Sbjct: 10  MGLIVLSAIAIIVFLPIFMFRCYHNRFMQNQTRALDVEQPNHATR---LFARFRAEVMRR 69

Query: 61  RQT--TTQSNDTTEGEETSSAVMKVAYK-VKDNEAGGSYCCCAICIEEFEDEEICGVVES 120
           + +  TT     T  EE +S V KVAYK +K  E   S  CCAICIE FE++EICGV++ 
Sbjct: 70  QSSIATTPPRPNTAEEEAASIVTKVAYKDIKTTEEADSDDCCAICIEGFEEDEICGVLDR 129

Query: 121 CGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQ 148
           CGHCFH+ C+DQWL I+SRCPLCRCLV  VS+
Sbjct: 130 CGHCFHKICIDQWLGIKSRCPLCRCLVRVVSE 158

[Close]

BLAST of MELO3C020634 vs. NCBI nr
Match: KAG6583431.1 (RING-H2 finger protein ATL5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 134.4 bits (337), Expect = 7.9e-28
Identity = 80/152 (52.63%), Postives = 99/152 (65.13%), Query Frame = 0


Query: 1   MGFLFVSVVCII--LIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQ 60
           MG + +S + II  L IF+F  YH  L   QTR LD+EQ  H  R   L A+ +AE +RQ
Sbjct: 10  MGVIVLSAIAIIVFLSIFMFRCYHNHLMQYQTRALDVEQTNHATR---LFARFRAEFMRQ 69

Query: 61  RQT--TTQSNDTTEGEETSSAVMKVAYK-VKDNEAGGSYCCCAICIEEFEDEEICGVVES 120
           +Q+         T  EE +S V KVAYK +K  E   S  CCAICIE F++EEICGV++ 
Sbjct: 70  QQSIVAPPPRSNTAEEEAASIVTKVAYKDIKTTEEADSDDCCAICIEGFQEEEICGVLDR 129

Query: 121 CGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQ 148
           CGHCFH+ C+DQWL IESRCPLCRCLV  VS+
Sbjct: 130 CGHCFHKVCIDQWLGIESRCPLCRCLVRVVSE 158

[Close]

BLAST of MELO3C020634 vs. ExPASy TrEMBL
Match: A0A5D3BE50 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002270 PE=3 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.0e-77
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MGFLFVSVVCIILIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQ 60
           MGFLFVSVVCIILIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQ
Sbjct: 1   MGFLFVSVVCIILIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQ 60

Query: 61  TTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCF 120
           TTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCF
Sbjct: 61  TTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCF 120

Query: 121 HEDCMDQWLRIESRCPLCRCLVHAVSQQY 150
           HEDCMDQWLRIESRCPLCRCLVHAVSQQY
Sbjct: 121 HEDCMDQWLRIESRCPLCRCLVHAVSQQY 149

[Close]

BLAST of MELO3C020634 vs. ExPASy TrEMBL
Match: A0A5A7VMH1 (RING-H2 finger protein ATL52-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00560 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.0e-76
Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 1   MGFLFVSVVCIILIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQ 60
           MGFLFVSVVCIILIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQ
Sbjct: 1   MGFLFVSVVCIILIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQRQ 60

Query: 61  TTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCF 120
           TTTQSNDTTEGEETSSAVM VAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCF
Sbjct: 61  TTTQSNDTTEGEETSSAVMTVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCF 120

Query: 121 HEDCMDQWLRIESRCPLCRCLVHAVSQQY 150
           HEDCMDQWLRIESRCPLCRCLVHAVSQQY
Sbjct: 121 HEDCMDQWLRIESRCPLCRCLVHAVSQQY 149

[Close]

BLAST of MELO3C020634 vs. ExPASy TrEMBL
Match: A0A1S4E1K2 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC107991538 PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.6e-53
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 45  MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAICIEEF 104
           MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAICIEEF
Sbjct: 1   MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCCCAICIEEF 60

Query: 105 EDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY 150
           EDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY
Sbjct: 61  EDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY 105

[Close]

BLAST of MELO3C020634 vs. ExPASy TrEMBL
Match: A0A6J1I5C3 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111469386 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 1.2e-26
Identity = 77/152 (50.66%), Postives = 98/152 (64.47%), Query Frame = 0


Query: 1   MGFLFVSVVCII--LIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQ 60
           MG + +  + II  L IF+F  YH R  L QTR LD+EQ  H  R   L A+ +AE++RQ
Sbjct: 6   MGLMVLGAIAIIVFLPIFMFRCYHNRFMLYQTRALDVEQTNHATR---LFARFRAEVMRQ 65

Query: 61  RQT--TTQSNDTTEGEETSSAVMKVAYK-VKDNEAGGSYCCCAICIEEFEDEEICGVVES 120
           +Q+         T  EE +S V KVAY+ +K  +   S  CCAICIE FE+EEICGVV+ 
Sbjct: 66  QQSIAVPPPRPNTAEEEAASIVTKVAYRDIKPTKEADSDDCCAICIEGFEEEEICGVVDG 125

Query: 121 CGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQ 148
           C HCFH+ C+D+WL I SRCPLCRCLV  VS+
Sbjct: 126 CDHCFHKVCIDKWLGIVSRCPLCRCLVRVVSE 154

[Close]

BLAST of MELO3C020634 vs. ExPASy TrEMBL
Match: A0A6J1HJU0 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111464742 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.4e-25
Identity = 76/152 (50.00%), Postives = 97/152 (63.82%), Query Frame = 0


Query: 1   MGFLFVSVVCII--LIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQ 60
           MG + +S + II  L IF+F  YH  L   QTR LD+EQ  H  R   L A+ +AE ++Q
Sbjct: 6   MGLIVLSAIAIIVFLPIFMFRCYHNHLMQYQTRALDVEQTNHATR---LFARFRAEFMQQ 65

Query: 61  RQT--TTQSNDTTEGEETSSAVMKVAYK-VKDNEAGGSYCCCAICIEEFEDEEICGVVES 120
           +Q+         T  EE +S V KVAY+ +K  E       CAICIE FE+EEICGV++ 
Sbjct: 66  QQSIAAPPPRSNTAEEEAASIVTKVAYRDIKTTEEADVDDYCAICIEGFEEEEICGVLDR 125

Query: 121 CGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQ 148
           CGHCFH+ C+DQWLRI SRCPLCRCL+  VS+
Sbjct: 126 CGHCFHKVCIDQWLRIGSRCPLCRCLIRVVSE 154

[Close]

BLAST of MELO3C020634 vs. TAIR 10
Match: AT5G53110.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 2.7e-10
Identity = 21/43 (48.84%), Postives = 30/43 (69.77%), Query Frame = 0


Query: 97  CAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCR 140
           CAIC+ E+E +E    +  C HCFH DC+D+WL++   CP+CR
Sbjct: 330 CAICLSEYEPKETLRTIPQCQHCFHADCIDEWLKLNGTCPVCR 372

[Close]

BLAST of MELO3C020634 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.0 bits (149), Expect = 4.7e-10
Identity = 28/81 (34.57%), Postives = 44/81 (54.32%), Query Frame = 0


Query: 68  TTEGEETSSAVMK--VAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCM 127
           +T G+  + +++K    YK K  +       C++C+ EFE+ E   ++  C H FH  C+
Sbjct: 111 STNGDGLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCI 170

Query: 128 DQWLRIESRCPLCRCLVHAVS 147
           D WL+  S CPLCR  V  V+
Sbjct: 171 DTWLKSHSNCPLCRAFVTGVN 191

[Close]

BLAST of MELO3C020634 vs. TAIR 10
Match: AT2G47560.1 (RING/U-box superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 1.4e-09
Identity = 23/46 (50.00%), Postives = 31/46 (67.39%), Query Frame = 0


Query: 97  CAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV 143
           C++C+ EFE+E+   ++  CGH FH DC+D W R  S CPLCR  V
Sbjct: 108 CSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPV 153

[Close]

BLAST of MELO3C020634 vs. TAIR 10
Match: AT5G43420.1 (RING/U-box superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 1.4e-09
Identity = 22/46 (47.83%), Postives = 32/46 (69.57%), Query Frame = 0


Query: 97  CAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV 143
           C++C+ EF+DEE   ++ +C H FH DC+D WL+  + CPLCR  V
Sbjct: 138 CSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRV 183

[Close]

BLAST of MELO3C020634 vs. TAIR 10
Match: AT1G35330.1 (RING/U-box superfamily protein )

HSP 1 Score: 59.7 bits (143), Expect = 2.3e-09
Identity = 26/56 (46.43%), Postives = 33/56 (58.93%), Query Frame = 0


Query: 84  KVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCR 140
           +VK  + G     CAIC+ EFEDEE   ++  C H FH  C+D WL   S CP+CR
Sbjct: 115 QVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCR 170

The following BLAST results are available for this feature:

BLAST of MELO3C020634 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LF64	6.6e-09	34.57	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q9LSW9	1.9e-08	47.83	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1	[more]
O22255	1.9e-08	50.00	RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1	[more]
Q9C7I1	3.3e-08	46.43	RING-H2 finger protein ATL34 OS=Arabidopsis thaliana OX=3702 GN=ATL34 PE=2 SV=1	[more]
Q8W571	4.3e-08	40.63	RING-H2 finger protein ATL32 OS=Arabidopsis thaliana OX=3702 GN=ATL32 PE=2 SV=3	[more]

BLAST of MELO3C020634 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ97407.1	4.2e-77	100.00	RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa]	[more]
KAA0067736.1	2.1e-76	99.33	RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa]	[more]
XP_016902103.1	3.2e-53	100.00	PREDICTED: RING-H2 finger protein ATL52-like [Cucumis melo]	[more]
XP_023520574.1	9.4e-29	52.63	RING-H2 finger protein ATL64-like [Cucurbita pepo subsp. pepo]	[more]
KAG6583431.1	7.9e-28	52.63	RING-H2 finger protein ATL5, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of MELO3C020634 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BE50	2.0e-77	100.00	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A5A7VMH1	1.0e-76	99.33	RING-H2 finger protein ATL52-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A1S4E1K2	1.6e-53	100.00	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC107991538 PE=3 ...	[more]
A0A6J1I5C3	1.2e-26	50.66	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111469386 P...	[more]
A0A6J1HJU0	1.4e-25	50.00	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111464742...	[more]

BLAST of MELO3C020634 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53110.1	2.7e-10	48.84	RING/U-box superfamily protein	[more]
AT5G17600.1	4.7e-10	34.57	RING/U-box superfamily protein	[more]
AT2G47560.1	1.4e-09	50.00	RING/U-box superfamily protein	[more]
AT5G43420.1	1.4e-09	47.83	RING/U-box superfamily protein	[more]
AT1G35330.1	2.3e-09	46.43	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 97..138 e-value: 2.7E-4 score: 30.3
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 97..139 e-value: 1.1E-10 score: 41.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 97..139 score: 13.330199
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 36..144 e-value: 2.9E-16 score: 60.9
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 8..145
None	No IPR available	PANTHER	PTHR45676:SF73	E3 UBIQUITIN-PROTEIN LIGASE RING1-RELATED	coord: 8..145
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 96..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C020634.1	MELO3C020634.1	mRNA