MELO3C020454.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C020454.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Retrotransposon protein
Location	chr05: 8816371 .. 8818350 (+)
RNA-Seq Expression	MELO3C020454.jh1
Synteny	MELO3C020454.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAGAAGGTGTTTTGCCATTTTATGTCATTTACTAAGGACGACTGCTGGATTAGTCGGAACGGAAGTTATAGATGTAGAGGAGATGGTTGCCATGTTCCTGCATATATTAGCTCATGATATGAAGAATCGAATAATACAAAGGGAATTTGTACGGTCTGGTGAGACTGTTTCTAGACATTTCAACCTTGTCTTGTTAGCAGTTTTGACGTTACACAACGAGTTGTTGAAAAAACCTCAGCTAGCAACAAACTCGTGCATGGATCCGAGATGGAAATGGTTTGAGGTAAATACCAATTGTCTGAATGTTGGTTAGACTTTCCAAATAATATGCGTTAGATGGCTATTTCATACAAATTTACGTTATCATACCGTAGAATTGTCTTGGTGCGTTAGATGACACATACATTAAGGTGAATGTCAGTGCAACTGATCGTCCAAGATACAACACACGAAAGGGTGAAGTTGCGACAAATGTACTTGGTGTTTGCGATAAAAAAGGTGATTTTGTGTTTGTTTTATCTGGGTGGGAAGGATCGGCCGCTGATTCTAGAATTCTTAGAGATGCAATATCAAGACATAATGGACTGAAGGTTCCAAAGGGTAATTAGCTAGATGTTTTATCTCTTCGTAGTCTTTATATTCATAGGACGAGAATTCAAATAGTCGAGTTTTGAACAGGGTATTATTATCTATGTGATGCTGGGTACTCAAATGTTGAGGGTTTTTTAGCCCCATATAGGGGAGAAAGATATCATCTATCAGAGTGGCGTGGAGGAAGTAATGCACCAACAACAGCTCGAGAGTTCTTCAACATGAAACATTCGTCGGCACGGAATGTCATCAAAAGAGCATTTTGGTTGTTAAAAGGTTGCTGGGCAATTTTAAGAGGAAAGTCATACTACCCAGTCGATGTCCAATGTCGAACAATCATGGTGTGTTGTCTGCTACACAATCTTATCAATAGAGAGATGACTAACAGTGAAATAATCGATGATTTGGATGAGGGGGATTCAACATACGCTACAACTGGAGGTGACGAGATTAATTACATTGAGGCTTCAAACGGATGGAGTGAATTGAGGGATCAATTGGCTCGTACGATGTTCAGTAATTGGGAGTTACATGACCAGTAGTGCCTTAATACTCTTCTAATATCCAAGGATCATCGACAATAAATTGTCGTGTGAAATCTCTTAAAAAAACCTACCAAGCAATTGCAGAAATGAGGGGGCCATCATGTAGTGGCTTTGGATGGAATGAAGAATTCCAATGCATCGTTGCAGAACGAGATTTGTTTGATAGTTGGGTAAAGGTATTAACTTCATTTTACAATTGTACGTACTTTTTATAATCACAATCGTCAACTAATCTGCCTAAATTTCATAATACAATTGCACAGAGTCATCCTGCAGCCAAAGACCTTCTACACAAATCATTTCCATATTATGATGATTTGTTCTATGTCTTCGGCAAAGATCGGGCAACGGGAGCACGTTCAGAGACCTTTGCTGATGTAGGATCTAATGTGCCGAACATGTTTAATGGCGACGTTCCACTCGATGATTCACATGATCAAGACATCCCGATGATGTATAGCCAAGGAGTGCATATGTCACCAGATGAAATGTTTGGAATACGTGCAGGTCAAGCAAGTGAGAGAAAAAATTGTTCAAGTGGAAGTAAGAGGAAACGAGGTAGTAAACATTATGAAACGGTAGAGGTGATCAGGAGTGCAATGGAATTTGGAAATGATCAATTAAAGGCAATTGCAAATTGGCCAAAAGAGAAGCATGCAACAGAGGTCGAATTGCGTGCTGAAGTTGTGAAATAGCTGCAAGATATCCCTGAACTACAAAGTCGAGATAGGACAAAGCTTATGCAAATCCTATTCCGTAGTGTGGAGGCCATTGAGGGATTCTTGTCGATTCCAACAGAACGTAAATTGGAGTATTGCAGTATTCTCTTGCAAAATTAG

mRNA sequence

ATGGATAGAAGGTGTTTTGCCATTTTATGTCATTTACTAAGGACGACTGCTGGATTAGTCGGAACGGAAGTTATAGATGTAGAGGAGATGGTTGCCATGTTCCTGCATATATTAGCTCATGATATGAAGAATCGAATAATACAAAGGGAATTTGTACGGTCTGGTGAGACTGTTTCTAGACATTTCAACCTTGTCTTGTTAGCAGTTTTGACGTTACACAACGAGTTGTTGAAAAAACCTCAGCTAGCAACAAACTCGTGCATGGATCCGAGATGGAAATGGTTTGAGAGTCATCCTGCAGCCAAAGACCTTCTACACAAATCATTTCCATATTATGATGATTTGTTCTATGTCTTCGGCAAAGATCGGGCAACGGGAGCACGTTCAGAGACCTTTGCTGATGTAGGATCTAATGTGCCGAACATGTTTAATGGCGACGTTCCACTCGATGATTCACATGATCAAGACATCCCGATGATGTATAGCCAAGGAGTGCATATGTCACCAGATGAAATGTTTGGAATACGTGCAGGTCAAGCAAGTGAGAGAAAAAATTGTTCAAGTGGAAGTAAGAGGAAACGAGGTAGTAAACATTATGAAACGGTAGAGGTGATCAGGAGTGCAATGGAATTTGGAAATGATCAATTAAAGGCAATTGCAAATTGGCCAAAAGAGAAGCATGCAACAGAGGTCGAATTGCGTGCTGAAGTTGTGAAATAGCTGCAAGATATCCCTGAACTACAAAGTCGAGATAGGACAAAGCTTATGCAAATCCTATTCCGTAGTGTGGAGGCCATTGAGGGATTCTTGTCGATTCCAACAGAACGTAAATTGGAGTATTGCAGTATTCTCTTGCAAAATTAG

Coding sequence (CDS)

ATGGATAGAAGGTGTTTTGCCATTTTATGTCATTTACTAAGGACGACTGCTGGATTAGTCGGAACGGAAGTTATAGATGTAGAGGAGATGGTTGCCATGTTCCTGCATATATTAGCTCATGATATGAAGAATCGAATAATACAAAGGGAATTTGTACGGTCTGGTGAGACTGTTTCTAGACATTTCAACCTTGTCTTGTTAGCAGTTTTGACGTTACACAACGAGTTGTTGAAAAAACCTCAGCTAGCAACAAACTCGTGCATGGATCCGAGATGGAAATGGTTTGAGAGTCATCCTGCAGCCAAAGACCTTCTACACAAATCATTTCCATATTATGATGATTTGTTCTATGTCTTCGGCAAAGATCGGGCAACGGGAGCACGTTCAGAGACCTTTGCTGATGTAGGATCTAATGTGCCGAACATGTTTAATGGCGACGTTCCACTCGATGATTCACATGATCAAGACATCCCGATGATGTATAGCCAAGGAGTGCATATGTCACCAGATGAAATGTTTGGAATACGTGCAGGTCAAGCAAGTGAGAGAAAAAATTGTTCAAGTGGAAGTAAGAGGAAACGAGGTAGTAAACATTATGAAACGGTAGAGGTGATCAGGAGTGCAATGGAATTTGGAAATGATCAATTAAAGGCAATTGCAAATTGGCCAAAAGAGAAGCATGCAACAGAGGTCGAATTGCGTGCTGAAGTTGTGAAATAG

Protein sequence

MDRRCFAILCHLLRTTAGLVGTEVIDVEEMVAMFLHILAHDMKNRIIQREFVRSGETVSRHFNLVLLAVLTLHNELLKKPQLATNSCMDPRWKWFESHPAAKDLLHKSFPYYDDLFYVFGKDRATGARSETFADVGSNVPNMFNGDVPLDDSHDQDIPMMYSQGVHMSPDEMFGIRAGQASERKNCSSGSKRKRGSKHYETVEVIRSAMEFGNDQLKAIANWPKEKHATEVELRAEVVK

Homology

[Close]

BLAST of MELO3C020454.jh1 vs. NCBI nr
Match: KAA0033290.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK14818.1 putative nuclease HARBI1 [Cucumis melo var. makuwa])

HSP 1 Score: 371 bits (953), Expect = 3.83e-124
Identity = 226/449 (50.33%), Postives = 233/449 (51.89%), Query Frame = 0


Query: 1   MDRRCFAILCHLLRTTAGLVGTEVIDVEEMVAMFLHILAHDMKNRIIQREFVRSGETVSR 60
           MDRRCFAILCHLLRTTA LVGTEVIDVEEMVAMFLHILAHDMKNRIIQREFVRSGETVSR
Sbjct: 1   MDRRCFAILCHLLRTTARLVGTEVIDVEEMVAMFLHILAHDMKNRIIQREFVRSGETVSR 60

Query: 61  HFNLVLLAVLTLHNELLKKPQLATNSCMDPRWKWFES----------------------- 120
           HFNLVLL+VL LHNELLKKPQL TNSCMDPRWKWFE+                       
Sbjct: 61  HFNLVLLSVLRLHNELLKKPQLVTNSCMDPRWKWFENCLGALDDTYIKVNVSATDRPRYS 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 TRKGEVAINVLGVCDTKGDFVFVLSGWEGSAADSRILRDAISRHNGLKVPKGYYYLCDAG 180

Query: 181 --------------------------------------HPAA------------------ 239
                                                 H +A                  
Sbjct: 181 YSNVEGFLAPYRGERYHLSEWHGGSNAPTTAREFFNMKHSSARNVIKRAFWLLKGCWAIL 240

[Close]

BLAST of MELO3C020454.jh1 vs. NCBI nr
Match: TYK26031.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa])

HSP 1 Score: 322 bits (825), Expect = 1.13e-107
Identity = 176/283 (62.19%), Postives = 186/283 (65.72%), Query Frame = 0


Query: 1   MDRRCFAILCHLLRTTAGLVGTEVIDVEEMVAMFLHILAHDMKNRIIQREFVRSGETVSR 60
           MDRRC    CHLLRTTAGLVGT+VIDVEEMVAMF+HILAHDMKNR+IQR+FVR GETVSR
Sbjct: 1   MDRRCIPSSCHLLRTTAGLVGTKVIDVEEMVAMFMHILAHDMKNRMIQRKFVRCGETVSR 60

Query: 61  HFNLVLLAVLTLHNELLKKPQLATNSCMDPRWKWFE------------------------ 120
           HFN VLLAVL LH+ELLKK Q   NSC DPRWKWFE                        
Sbjct: 61  HFNFVLLAVLRLHDELLKKSQPVRNSCTDPRWKWFENCLGALDGTYIKVNVSATDRPRWE 120

Query: 121 --------------------SHPAAKDLLHKSFPYYDDLFYVFGKDRATGARSETFADVG 180
                               SHPAAK LL+KSFPYYDDL YVFGKDR T  RS+TF +VG
Sbjct: 121 GSATDSRILKDAISRHNGLKSHPAAKGLLNKSFPYYDDLSYVFGKDRVTRERSDTFVNVG 180

Query: 181 SNVPNMFNGDVPLDDSHDQDIPMMYSQGVHMSPDEMFGIRAGQASERKNCSSGSKRKRGS 239
           SNVPN+FN DV L DS DQDIPMMYSQGVHMSPDEMFGIRA                   
Sbjct: 181 SNVPNVFNDDVALGDSPDQDIPMMYSQGVHMSPDEMFGIRA------------------- 240

[Close]

BLAST of MELO3C020454.jh1 vs. NCBI nr
Match: KAA0067183.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa])

HSP 1 Score: 311 bits (797), Expect = 5.16e-103
Identity = 176/311 (56.59%), Postives = 186/311 (59.81%), Query Frame = 0


Query: 1   MDRRCFAILCHLLRTTAGLVGTEVIDVEEMVAMFLHILAHDMKNRIIQREFVRSGETVSR 60
           MDRRC    CHLLRTTAGLVGT+VIDVEEMVAMF+HILAHDMKNR+IQR+FVR GETVSR
Sbjct: 1   MDRRCIPSSCHLLRTTAGLVGTKVIDVEEMVAMFMHILAHDMKNRMIQRKFVRCGETVSR 60

Query: 61  HFNLVLLAVLTLHNELLKKPQLATNSCMDPRWKWFE------------------------ 120
           HFN VLLAVL LH+ELLKK Q   NSC DPRWKWFE                        
Sbjct: 61  HFNFVLLAVLRLHDELLKKSQPVRNSCTDPRWKWFENCLGALDGTYIKVNVSATDRPRYR 120

Query: 121 ------------------------------------------------SHPAAKDLLHKS 180
                                                           SHPAAK LL+KS
Sbjct: 121 TRKGDVVTNVLGVCDKKGDFVFVLSRWEGSATDSRILKDAISRHNGLKSHPAAKGLLNKS 180

Query: 181 FPYYDDLFYVFGKDRATGARSETFADVGSNVPNMFNGDVPLDDSHDQDIPMMYSQGVHMS 239
           FPYYDDL YVFGKDR T  RS+TF +VGSNVPN+FN DV L DS DQDIPMMYSQGVHMS
Sbjct: 181 FPYYDDLSYVFGKDRVTRERSDTFVNVGSNVPNVFNDDVALGDSPDQDIPMMYSQGVHMS 240

[Close]

BLAST of MELO3C020454.jh1 vs. NCBI nr
Match: KAA0063430.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK11691.1 putative nuclease HARBI1 [Cucumis melo var. makuwa])

HSP 1 Score: 256 bits (655), Expect = 5.07e-80
Identity = 175/387 (45.22%), Postives = 185/387 (47.80%), Query Frame = 0


Query: 1   MDRRCFAILCHLLRTTAGLVGTEVIDVEEMVAMFLHILAHDMKNRIIQREFVRSGETVSR 60
           MDRRCFAILCHLLRTTA LVGTEVIDVEEMV MFLHIL HDMKNR+IQR+F  SGETVSR
Sbjct: 1   MDRRCFAILCHLLRTTARLVGTEVIDVEEMVVMFLHILVHDMKNRMIQRKFQWSGETVSR 60

Query: 61  HFNLVLLAVLTLHNELLKKPQLATNSCMDPRWKWFES------------------HPAAK 120
           HFNLVLL VL LH+ELLKKPQL TNSC DPRWKWFE+                  HP  +
Sbjct: 61  HFNLVLLEVLWLHDELLKKPQLVTNSCTDPRWKWFENCLGALDGTYIKVNVSATDHPRYR 120

Query: 121 D----------------------------------------------------------- 180
                                                                       
Sbjct: 121 TRKSKVAINVLGVCNTKGDFVFVLSGWEGSTADSRILRDVISRHNGLKVSKGRWTILRGK 180

Query: 181 ----------------LLHK-------SFPYYDDL------------------------- 239
                           LLH        +    DDL                         
Sbjct: 181 SYYPVDVQCRTIMACCLLHNLISREMTNSEIIDDLDEGDSTYATTGEWQVCHEHRNTHGL 240

[Close]

BLAST of MELO3C020454.jh1 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK08388.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 252 bits (643), Expect = 7.96e-80
Identity = 122/146 (83.56%), Postives = 132/146 (90.41%), Query Frame = 0


Query: 94  WFESHPAAKDLLHKSFPYYDDLFYVFGKDRATGARSETFADVGSNVPNMFNGDVPLDDSH 153
           W +SHPAAK LLHKSFPYYDDL YVFGKDRATGARSETF +VGSNV NMFN  +PL DSH
Sbjct: 111 WIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSH 170

Query: 154 DQDIPMMYSQGVHMSPDEMFGIRAGQASERKNCSSGSKRKRGSKHYETVEVIRSAMEFGN 213
           D+DIP MYSQGVHMSPDEMFGIRAGQASER+NCSS SKRKRGS+ YETVEVIRS MEFGN
Sbjct: 171 DEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGN 230

Query: 214 DQLKAIANWPKEKHATEVELRAEVVK 239
           +QLKAIA+WPKEK A EVE+RA+VVK
Sbjct: 231 EQLKAIADWPKEKRAMEVEMRAQVVK 256

[Close]

BLAST of MELO3C020454.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SQU2 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold472G00070 PE=3 SV=1)

HSP 1 Score: 371 bits (953), Expect = 1.85e-124
Identity = 226/449 (50.33%), Postives = 233/449 (51.89%), Query Frame = 0


Query: 1   MDRRCFAILCHLLRTTAGLVGTEVIDVEEMVAMFLHILAHDMKNRIIQREFVRSGETVSR 60
           MDRRCFAILCHLLRTTA LVGTEVIDVEEMVAMFLHILAHDMKNRIIQREFVRSGETVSR
Sbjct: 1   MDRRCFAILCHLLRTTARLVGTEVIDVEEMVAMFLHILAHDMKNRIIQREFVRSGETVSR 60

Query: 61  HFNLVLLAVLTLHNELLKKPQLATNSCMDPRWKWFES----------------------- 120
           HFNLVLL+VL LHNELLKKPQL TNSCMDPRWKWFE+                       
Sbjct: 61  HFNLVLLSVLRLHNELLKKPQLVTNSCMDPRWKWFENCLGALDDTYIKVNVSATDRPRYS 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 TRKGEVAINVLGVCDTKGDFVFVLSGWEGSAADSRILRDAISRHNGLKVPKGYYYLCDAG 180

Query: 181 --------------------------------------HPAA------------------ 239
                                                 H +A                  
Sbjct: 181 YSNVEGFLAPYRGERYHLSEWHGGSNAPTTAREFFNMKHSSARNVIKRAFWLLKGCWAIL 240

[Close]

BLAST of MELO3C020454.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DQT0 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1567G00460 PE=4 SV=1)

HSP 1 Score: 322 bits (825), Expect = 5.47e-108
Identity = 176/283 (62.19%), Postives = 186/283 (65.72%), Query Frame = 0


Query: 1   MDRRCFAILCHLLRTTAGLVGTEVIDVEEMVAMFLHILAHDMKNRIIQREFVRSGETVSR 60
           MDRRC    CHLLRTTAGLVGT+VIDVEEMVAMF+HILAHDMKNR+IQR+FVR GETVSR
Sbjct: 1   MDRRCIPSSCHLLRTTAGLVGTKVIDVEEMVAMFMHILAHDMKNRMIQRKFVRCGETVSR 60

Query: 61  HFNLVLLAVLTLHNELLKKPQLATNSCMDPRWKWFE------------------------ 120
           HFN VLLAVL LH+ELLKK Q   NSC DPRWKWFE                        
Sbjct: 61  HFNFVLLAVLRLHDELLKKSQPVRNSCTDPRWKWFENCLGALDGTYIKVNVSATDRPRWE 120

Query: 121 --------------------SHPAAKDLLHKSFPYYDDLFYVFGKDRATGARSETFADVG 180
                               SHPAAK LL+KSFPYYDDL YVFGKDR T  RS+TF +VG
Sbjct: 121 GSATDSRILKDAISRHNGLKSHPAAKGLLNKSFPYYDDLSYVFGKDRVTRERSDTFVNVG 180

Query: 181 SNVPNMFNGDVPLDDSHDQDIPMMYSQGVHMSPDEMFGIRAGQASERKNCSSGSKRKRGS 239
           SNVPN+FN DV L DS DQDIPMMYSQGVHMSPDEMFGIRA                   
Sbjct: 181 SNVPNVFNDDVALGDSPDQDIPMMYSQGVHMSPDEMFGIRA------------------- 240

[Close]

BLAST of MELO3C020454.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VGH2 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G002660 PE=3 SV=1)

HSP 1 Score: 311 bits (797), Expect = 2.50e-103
Identity = 176/311 (56.59%), Postives = 186/311 (59.81%), Query Frame = 0


Query: 1   MDRRCFAILCHLLRTTAGLVGTEVIDVEEMVAMFLHILAHDMKNRIIQREFVRSGETVSR 60
           MDRRC    CHLLRTTAGLVGT+VIDVEEMVAMF+HILAHDMKNR+IQR+FVR GETVSR
Sbjct: 1   MDRRCIPSSCHLLRTTAGLVGTKVIDVEEMVAMFMHILAHDMKNRMIQRKFVRCGETVSR 60

Query: 61  HFNLVLLAVLTLHNELLKKPQLATNSCMDPRWKWFE------------------------ 120
           HFN VLLAVL LH+ELLKK Q   NSC DPRWKWFE                        
Sbjct: 61  HFNFVLLAVLRLHDELLKKSQPVRNSCTDPRWKWFENCLGALDGTYIKVNVSATDRPRYR 120

Query: 121 ------------------------------------------------SHPAAKDLLHKS 180
                                                           SHPAAK LL+KS
Sbjct: 121 TRKGDVVTNVLGVCDKKGDFVFVLSRWEGSATDSRILKDAISRHNGLKSHPAAKGLLNKS 180

Query: 181 FPYYDDLFYVFGKDRATGARSETFADVGSNVPNMFNGDVPLDDSHDQDIPMMYSQGVHMS 239
           FPYYDDL YVFGKDR T  RS+TF +VGSNVPN+FN DV L DS DQDIPMMYSQGVHMS
Sbjct: 181 FPYYDDLSYVFGKDRVTRERSDTFVNVGSNVPNVFNDDVALGDSPDQDIPMMYSQGVHMS 240

[Close]

BLAST of MELO3C020454.jh1 vs. ExPASy TrEMBL
Match: A0A5A7V8C5 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold828G00690 PE=3 SV=1)

HSP 1 Score: 256 bits (655), Expect = 2.45e-80
Identity = 175/387 (45.22%), Postives = 185/387 (47.80%), Query Frame = 0


Query: 1   MDRRCFAILCHLLRTTAGLVGTEVIDVEEMVAMFLHILAHDMKNRIIQREFVRSGETVSR 60
           MDRRCFAILCHLLRTTA LVGTEVIDVEEMV MFLHIL HDMKNR+IQR+F  SGETVSR
Sbjct: 1   MDRRCFAILCHLLRTTARLVGTEVIDVEEMVVMFLHILVHDMKNRMIQRKFQWSGETVSR 60

Query: 61  HFNLVLLAVLTLHNELLKKPQLATNSCMDPRWKWFES------------------HPAAK 120
           HFNLVLL VL LH+ELLKKPQL TNSC DPRWKWFE+                  HP  +
Sbjct: 61  HFNLVLLEVLWLHDELLKKPQLVTNSCTDPRWKWFENCLGALDGTYIKVNVSATDHPRYR 120

Query: 121 D----------------------------------------------------------- 180
                                                                       
Sbjct: 121 TRKSKVAINVLGVCNTKGDFVFVLSGWEGSTADSRILRDVISRHNGLKVSKGRWTILRGK 180

Query: 181 ----------------LLHK-------SFPYYDDL------------------------- 239
                           LLH        +    DDL                         
Sbjct: 181 SYYPVDVQCRTIMACCLLHNLISREMTNSEIIDDLDEGDSTYATTGEWQVCHEHRNTHGL 240

[Close]

BLAST of MELO3C020454.jh1 vs. ExPASy TrEMBL
Match: A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1)

HSP 1 Score: 252 bits (643), Expect = 3.85e-80
Identity = 122/146 (83.56%), Postives = 132/146 (90.41%), Query Frame = 0


Query: 94  WFESHPAAKDLLHKSFPYYDDLFYVFGKDRATGARSETFADVGSNVPNMFNGDVPLDDSH 153
           W +SHPAAK LLHKSFPYYDDL YVFGKDRATGARSETF +VGSNV NMFN  +PL DSH
Sbjct: 111 WIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSH 170

Query: 154 DQDIPMMYSQGVHMSPDEMFGIRAGQASERKNCSSGSKRKRGSKHYETVEVIRSAMEFGN 213
           D+DIP MYSQGVHMSPDEMFGIRAGQASER+NCSS SKRKRGS+ YETVEVIRS MEFGN
Sbjct: 171 DEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGN 230

Query: 214 DQLKAIANWPKEKHATEVELRAEVVK 239
           +QLKAIA+WPKEK A EVE+RA+VVK
Sbjct: 231 EQLKAIADWPKEKRAMEVEMRAQVVK 256

[Close]

BLAST of MELO3C020454.jh1 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 64.3 bits (155), Expect = 1.5e-10
Identity = 33/78 (42.31%), Postives = 48/78 (61.54%), Query Frame = 0


Query: 1   MDRRCFAILCHLLRTTAGLVGTEVIDVEEMVAMFLHILAHDMKNRIIQREFVRSGETVSR 60
           MD+  F  LC LL+T   L  T  I +E  +A+FL I+ H+++ R +Q  F  SGET+SR
Sbjct: 48  MDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRTRAVQELFCYSGETISR 107

Query: 61  HFNLVLLAVLTLHNELLK 79
           HFN VL AV+ +  +  +
Sbjct: 108 HFNNVLNAVIAISKDFFQ 125

The following BLAST results are available for this feature:

BLAST of MELO3C020454.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0033290.1	3.83e-124	50.33	putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK14818.1 putative nucleas...	[more]
TYK26031.1	1.13e-107	62.19	putative nuclease HARBI1 [Cucumis melo var. makuwa]	[more]
KAA0067183.1	5.16e-103	56.59	putative nuclease HARBI1 [Cucumis melo var. makuwa]	[more]
KAA0063430.1	5.07e-80	45.22	putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK11691.1 putative nucleas...	[more]
XP_008441954.1	7.96e-80	83.56	PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 ret...	[more]

BLAST of MELO3C020454.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C020454.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SQU2	1.85e-124	50.33	Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5D3DQT0	5.47e-108	62.19	Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5A7VGH2	2.50e-103	56.59	Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5A7V8C5	2.45e-80	45.22	Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5A7U0H7	3.85e-80	83.56	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MELO3C020454.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41980.1	1.5e-10	42.31	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR22930:SF216	OS11G0577650 PROTEIN	coord: 1..102
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 1..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C020454.jh1.t1	MELO3C020454.jh1.t1	mRNA