MELO3C020431 (gene) Melon (DHL92) v4

Overview


Name	MELO3C020431
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	KNR4/SMI1-like protein 2-like
Location	chr05: 8574451 .. 8575196 (+)
RNA-Seq Expression	MELO3C020431
Synteny	MELO3C020431

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAAGGAGAAGGGAGAAGTTAGAACGAGAACAAGTGACCGGTTAAAAGCCTTAGGGATCACTTGTTCGAAAAAAACAATTGCCAAAAGGGATTCAAACTCTATCGAGTTTTCAGATGAGGTACTAATGTATGTTTTTAAGAATTACACAGAAGTTGTAGATGTTTATAACTTTTTCTATGTCTAGCAGAGACCAGAAGATCGTGGAGGGGTCGAAAAGCAAGCCAAACAATCCAATAACTTTAAAAAAGAGGGGGAGGATTGAACCGCCAAAAGAAGATGTCACTGTACATAATAAGCAAAGGATAAAAAGCTTGGTAAACTGTAGATTTATTTTCTAATGAGTTGTGGTCTATGTAGGTTTCAAAAAGTAGCTTATTGATGTTGTGGTCTATGTAGGTTTCAAAAAGTCGAGTTTACAGAAGGAAACTTGAAGAAAAGAAACAAAAAGAGGTTGAAGAAAAGGTATGTATTTTACCCCTTGTTGTACTTCAATTATGTATTATATAAATTGATTATAACTTTGACAAACAGGAAAATATTGAAAGCAAAAGCGAAGAAGATGAACAACGAGAAAAAGATAAACAAGTAGAAGAAGATAACGATGAAGAAGGGGAAGGGGAGACAGCAATAGATGAAGATTTGAGTTCATGGATGAGTAAACAAGATGAAAGATCAACGAATAAGAAGAAGAGAAAAAAGACTACGGAAAAGGGAAAGAAGGTAAGCGTATGGTTAATTTGA

mRNA sequence

ATGAAAAAGGAGAAGGGAGAAGTTAGAACGAGAACAAGTGACCGGTTAAAAGCCTTAGGGATCACTTGTTCGAAAAAAACAATTGCCAAAAGGGATTCAAACTCTATCGAGTTTTCAGATGAGGTTTCAAAAAGTCGAGTTTACAGAAGGAAACTTGAAGAAAAGAAACAAAAAGAGGTTGAAGAAAAGGAAAATATTGAAAGCAAAAGCGAAGAAGATGAACAACGAGAAAAAGATAAACAAGTAGAAGAAGATAACGATGAAGAAGGGGAAGGGGAGACAGCAATAGATGAAGATTTGAGTTCATGGATGAGTAAACAAGATGAAAGATCAACGAATAAGAAGAAGAGAAAAAAGACTACGGAAAAGGGAAAGAAGGTAAGCGTATGGTTAATTTGA

Coding sequence (CDS)

ATGAAAAAGGAGAAGGGAGAAGTTAGAACGAGAACAAGTGACCGGTTAAAAGCCTTAGGGATCACTTGTTCGAAAAAAACAATTGCCAAAAGGGATTCAAACTCTATCGAGTTTTCAGATGAGGTTTCAAAAAGTCGAGTTTACAGAAGGAAACTTGAAGAAAAGAAACAAAAAGAGGTTGAAGAAAAGGAAAATATTGAAAGCAAAAGCGAAGAAGATGAACAACGAGAAAAAGATAAACAAGTAGAAGAAGATAACGATGAAGAAGGGGAAGGGGAGACAGCAATAGATGAAGATTTGAGTTCATGGATGAGTAAACAAGATGAAAGATCAACGAATAAGAAGAAGAGAAAAAAGACTACGGAAAAGGGAAAGAAGGTAAGCGTATGGTTAATTTGA

Protein sequence

MKKEKGEVRTRTSDRLKALGITCSKKTIAKRDSNSIEFSDEVSKSRVYRRKLEEKKQKEVEEKENIESKSEEDEQREKDKQVEEDNDEEGEGETAIDEDLSSWMSKQDERSTNKKKRKKTTEKGKKVSVWLI

Homology

[Close]

BLAST of MELO3C020431 vs. NCBI nr
Match: XP_008457273.1 (PREDICTED: uncharacterized protein DDB_G0286299-like [Cucumis melo])

HSP 1 Score: 215.7 bits (548), Expect = 2.4e-52
Identity = 128/132 (96.97%), Postives = 129/132 (97.73%), Query Frame = 0


Query: 1   MKKEKGEVRTRTSDRLKALGITCSKKTIAKRDSNSIEFSDEVSKSRVYRRKLEEKKQKEV 60
           MKKEKGEVRTRTSDRLKALGITCSKKTIAKRDSNSIEFSDEVSKSRVYRRKLEEKKQKEV
Sbjct: 1   MKKEKGEVRTRTSDRLKALGITCSKKTIAKRDSNSIEFSDEVSKSRVYRRKLEEKKQKEV 60

Query: 61  EEKENIESKSEEDEQREKDKQVEEDNDEEGEGETAIDEDLSSWMSKQDERSTNKKKRKKT 120
           EEKENIESKSEEDEQREKDKQVEEDNDEEGEGETAIDEDLSSWMSKQDERSTNKKKRKKT
Sbjct: 61  EEKENIESKSEEDEQREKDKQVEEDNDEEGEGETAIDEDLSSWMSKQDERSTNKKKRKKT 120

Query: 121 TEKGKKVSVWLI 133
           TEKGKK  V L+
Sbjct: 121 TEKGKKFKVSLM 132

[Close]

BLAST of MELO3C020431 vs. NCBI nr
Match: KAA0041558.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 84.7 bits (208), Expect = 6.4e-13
Identity = 72/143 (50.35%), Postives = 93/143 (65.03%), Query Frame = 0


Query: 1   MKKEKGEVRTRTSDRLKALGITCSKKTIAKRDSNSIEFSDEVSKSRVYRRKLEEKKQKEV 60
           MKK K +V+TRTSDRL+  GIT S+K++A R  N     +EVS+ RVYR K E KKQK+V
Sbjct: 1   MKKGKRDVKTRTSDRLRVAGITGSRKSLATRIQNLSSSFEEVSRRRVYRGKREGKKQKDV 60

Query: 61  EEKENIESKSEEDEQREKDKQVEED----------------NDEEGEGETAIDEDLSSWM 120
           E KE+ +S+SE++E+ ++D++VEED                 DEE EGETAI ED +S  
Sbjct: 61  EGKEDTKSESEKEEKVQEDEEVEEDEQDEDKEDEEKQDEEEQDEEEEGETAIGEDSNSST 120

Query: 121 SKQDERSTNKKKRKKTTEKGKKV 128
           S   E  T+ KKRKK  EKGKKV
Sbjct: 121 S---EIPTDTKKRKKVAEKGKKV 140

[Close]

BLAST of MELO3C020431 vs. NCBI nr
Match: TYK03567.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 81.3 bits (199), Expect = 7.1e-12
Identity = 64/127 (50.39%), Postives = 71/127 (55.91%), Query Frame = 0


Query: 1   MKKEKGEVRTRTSDRLKALGITCSKKTIAKRDSNSIEFSDEVSKSRVYRRKLEEKKQKEV 60
           MKK K EVRTR SDRL+A  I  SKK +  +    +  SDEVSK RVY RK EEKKQKEV
Sbjct: 1   MKKGKREVRTRISDRLRAAEIIGSKKRLPTKIQTLLSSSDEVSKIRVYIRKFEEKKQKEV 60

Query: 61  EEKENIESKSEEDEQREKDKQVEEDNDEEGEGETAIDEDLSSWMSKQDERSTNKKKRKKT 120
           EEK                            GE ++DED SS  S+QDER T  KKRKKT
Sbjct: 61  EEK----------------------------GEASVDEDSSSSTSEQDERPTGTKKRKKT 99

Query: 121 TEKGKKV 128
            EK KKV
Sbjct: 121 VEKEKKV 99

[Close]

BLAST of MELO3C020431 vs. NCBI nr
Match: KAA0050354.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 80.5 bits (197), Expect = 1.2e-11
Identity = 64/128 (50.00%), Postives = 71/128 (55.47%), Query Frame = 0


Query: 1   MKKEKGEVRTRTSDRLKALGITCSKKTIAKRDSNSIEFSDEVSKSRVYRRKLEEKKQKEV 60
           MKK K EVRTR SDRL+A  I  SKK +  +    +  SDEVSK RVY RK EEKKQKEV
Sbjct: 1   MKKGKREVRTRISDRLRAAEIIGSKKRLPTKIQTLLSSSDEVSKIRVYIRKFEEKKQKEV 60

Query: 61  EEKENIESKSEEDEQREKDKQVEEDNDEEGEGETAIDEDLSSWMSKQDERSTNKKKRKKT 120
           EEK                            GE ++DED SS  S+QDER T  KKRKKT
Sbjct: 61  EEK----------------------------GEASVDEDSSSSTSEQDERPTGTKKRKKT 100

Query: 121 TEKGKKVS 129
            EK KK S
Sbjct: 121 VEKEKKSS 100

[Close]

BLAST of MELO3C020431 vs. NCBI nr
Match: KAA0056158.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 71.6 bits (174), Expect = 5.6e-09
Identity = 45/66 (68.18%), Postives = 49/66 (74.24%), Query Frame = 0


Query: 1   MKKEKGEVRTRTSDRLKALGITCSKKTIAKRDSNSIEFSDEVSKSRVYRRKLEEKKQKEV 60
           MKK KGEVRTRTSDRL+A GIT SKK +          SDEVSKSRVY+RK EEKKQKEV
Sbjct: 76  MKKRKGEVRTRTSDRLRAAGITGSKKRLPTGIQTLSSSSDEVSKSRVYKRKSEEKKQKEV 135

Query: 61  EEKENI 67
           EEK  +
Sbjct: 136 EEKGRV 141

[Close]

BLAST of MELO3C020431 vs. ExPASy TrEMBL
Match: A0A1S3C6E3 (uncharacterized protein DDB_G0286299-like OS=Cucumis melo OX=3656 GN=LOC103497002 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.2e-52
Identity = 128/132 (96.97%), Postives = 129/132 (97.73%), Query Frame = 0


Query: 1   MKKEKGEVRTRTSDRLKALGITCSKKTIAKRDSNSIEFSDEVSKSRVYRRKLEEKKQKEV 60
           MKKEKGEVRTRTSDRLKALGITCSKKTIAKRDSNSIEFSDEVSKSRVYRRKLEEKKQKEV
Sbjct: 1   MKKEKGEVRTRTSDRLKALGITCSKKTIAKRDSNSIEFSDEVSKSRVYRRKLEEKKQKEV 60

Query: 61  EEKENIESKSEEDEQREKDKQVEEDNDEEGEGETAIDEDLSSWMSKQDERSTNKKKRKKT 120
           EEKENIESKSEEDEQREKDKQVEEDNDEEGEGETAIDEDLSSWMSKQDERSTNKKKRKKT
Sbjct: 61  EEKENIESKSEEDEQREKDKQVEEDNDEEGEGETAIDEDLSSWMSKQDERSTNKKKRKKT 120

Query: 121 TEKGKKVSVWLI 133
           TEKGKK  V L+
Sbjct: 121 TEKGKKFKVSLM 132

[Close]

BLAST of MELO3C020431 vs. ExPASy TrEMBL
Match: A0A5A7TF74 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold93G00140 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 3.1e-13
Identity = 72/143 (50.35%), Postives = 93/143 (65.03%), Query Frame = 0


Query: 1   MKKEKGEVRTRTSDRLKALGITCSKKTIAKRDSNSIEFSDEVSKSRVYRRKLEEKKQKEV 60
           MKK K +V+TRTSDRL+  GIT S+K++A R  N     +EVS+ RVYR K E KKQK+V
Sbjct: 1   MKKGKRDVKTRTSDRLRVAGITGSRKSLATRIQNLSSSFEEVSRRRVYRGKREGKKQKDV 60

Query: 61  EEKENIESKSEEDEQREKDKQVEED----------------NDEEGEGETAIDEDLSSWM 120
           E KE+ +S+SE++E+ ++D++VEED                 DEE EGETAI ED +S  
Sbjct: 61  EGKEDTKSESEKEEKVQEDEEVEEDEQDEDKEDEEKQDEEEQDEEEEGETAIGEDSNSST 120

Query: 121 SKQDERSTNKKKRKKTTEKGKKV 128
           S   E  T+ KKRKK  EKGKKV
Sbjct: 121 S---EIPTDTKKRKKVAEKGKKV 140

[Close]

BLAST of MELO3C020431 vs. ExPASy TrEMBL
Match: A0A5D3BVR2 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00650 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 3.4e-12
Identity = 64/127 (50.39%), Postives = 71/127 (55.91%), Query Frame = 0


Query: 1   MKKEKGEVRTRTSDRLKALGITCSKKTIAKRDSNSIEFSDEVSKSRVYRRKLEEKKQKEV 60
           MKK K EVRTR SDRL+A  I  SKK +  +    +  SDEVSK RVY RK EEKKQKEV
Sbjct: 1   MKKGKREVRTRISDRLRAAEIIGSKKRLPTKIQTLLSSSDEVSKIRVYIRKFEEKKQKEV 60

Query: 61  EEKENIESKSEEDEQREKDKQVEEDNDEEGEGETAIDEDLSSWMSKQDERSTNKKKRKKT 120
           EEK                            GE ++DED SS  S+QDER T  KKRKKT
Sbjct: 61  EEK----------------------------GEASVDEDSSSSTSEQDERPTGTKKRKKT 99

Query: 121 TEKGKKV 128
            EK KKV
Sbjct: 121 VEKEKKV 99

[Close]

BLAST of MELO3C020431 vs. ExPASy TrEMBL
Match: A0A5A7U540 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold88G00850 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 5.8e-12
Identity = 64/128 (50.00%), Postives = 71/128 (55.47%), Query Frame = 0


Query: 1   MKKEKGEVRTRTSDRLKALGITCSKKTIAKRDSNSIEFSDEVSKSRVYRRKLEEKKQKEV 60
           MKK K EVRTR SDRL+A  I  SKK +  +    +  SDEVSK RVY RK EEKKQKEV
Sbjct: 1   MKKGKREVRTRISDRLRAAEIIGSKKRLPTKIQTLLSSSDEVSKIRVYIRKFEEKKQKEV 60

Query: 61  EEKENIESKSEEDEQREKDKQVEEDNDEEGEGETAIDEDLSSWMSKQDERSTNKKKRKKT 120
           EEK                            GE ++DED SS  S+QDER T  KKRKKT
Sbjct: 61  EEK----------------------------GEASVDEDSSSSTSEQDERPTGTKKRKKT 100

Query: 121 TEKGKKVS 129
            EK KK S
Sbjct: 121 VEKEKKSS 100

[Close]

BLAST of MELO3C020431 vs. ExPASy TrEMBL
Match: A0A5A7TQ33 (KNR4/SMI1-like protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G001670 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.9e-07
Identity = 54/101 (53.47%), Postives = 69/101 (68.32%), Query Frame = 0


Query: 31  RDSNSIEF---SDEVSKSRVYRRKLEEKKQKEVEEKENIESKSEEDEQREKDKQVEEDND 90
           R  +S+ F   S+E  +      + EE +Q E EE+E  + + EEDEQ E+DKQVEE++D
Sbjct: 27  RSLSSVSFDLRSEEEDEQVEEEEQEEEDEQVEEEEQEEKDEQVEEDEQEEEDKQVEEEHD 86

Query: 91  EEGEGETAIDEDLSSWMSKQDERSTNKKKRKKTTEKGKKVS 129
           EEGE ETA+DED SS  S+QDER  + KKRKK  EKGKKVS
Sbjct: 87  EEGECETAVDEDSSSSTSEQDERPMDTKKRKKAVEKGKKVS 127

The following BLAST results are available for this feature:

BLAST of MELO3C020431 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457273.1	2.4e-52	96.97	PREDICTED: uncharacterized protein DDB_G0286299-like [Cucumis melo]	[more]
KAA0041558.1	6.4e-13	50.35	protein Ycf2-like [Cucumis melo var. makuwa]	[more]
TYK03567.1	7.1e-12	50.39	protein Ycf2-like [Cucumis melo var. makuwa]	[more]
KAA0050354.1	1.2e-11	50.00	NBS-LRR type resistance protein [Cucumis melo var. makuwa]	[more]
KAA0056158.1	5.6e-09	68.18	protein Ycf2-like [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C020431 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C020431 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C6E3	1.2e-52	96.97	uncharacterized protein DDB_G0286299-like OS=Cucumis melo OX=3656 GN=LOC10349700...	[more]
A0A5A7TF74	3.1e-13	50.35	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold93G001...	[more]
A0A5D3BVR2	3.4e-12	50.39	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00...	[more]
A0A5A7U540	5.8e-12	50.00	NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5A7TQ33	1.9e-07	53.47	KNR4/SMI1-like protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]

BLAST of MELO3C020431 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 49..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C020431.1	MELO3C020431.1	mRNA