MELO3C020226 (gene) Melon (DHL92) v4

Overview


Name	MELO3C020226
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Flocculation protein FLO11-like
Location	chr06: 15367133 .. 15367480 (-)
RNA-Seq Expression	MELO3C020226
Synteny	MELO3C020226

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGATCTACCTACACATTCTTCTGCTGCTAATCAGACTGACCACGCTATTGATCCTCATGCTCCCTCTGATAGAAGTGTCAACCCTTCTACTGTTGTCCCCCCTGTCGGGGCAATAGAGATATCTTCTATTCCTAAAATGTCTAGTCGTCCTCCAGTTAAAGGTTGGAGAGTGATCACTACCAAGGTCAGTCGTCGTAAGCTACCACCAAACCTTCCTGTAGCTCCTATTAATGGTGTTTCATTCCACTCAGAATACAGTATGCACAAGTGGAAATATGTTGTGCAAAGACGCATGGCTAATGAGATGAACATTTTGGATAAACATCAGTCCTGTACCCCATAA

mRNA sequence

ATGGTTGATCTACCTACACATTCTTCTGCTGCTAATCAGACTGACCACGCTATTGATCCTCATGCTCCCTCTGATAGAAGTGTCAACCCTTCTACTGTTGTCCCCCCTGTCGGGGCAATAGAGATATCTTCTATTCCTAAAATGTCTAGTCGTCCTCCAGTTAAAGGTTGGAGAGTGATCACTACCAAGGTCAGTCGTCGTAAGCTACCACCAAACCTTCCTGTAGCTCCTATTAATGGTGTTTCATTCCACTCAGAATACAGTATGCACAAGTGGAAATATGTTGTGCAAAGACGCATGGCTAATGAGATGAACATTTTGGATAAACATCAGTCCTGTACCCCATAA

Coding sequence (CDS)

ATGGTTGATCTACCTACACATTCTTCTGCTGCTAATCAGACTGACCACGCTATTGATCCTCATGCTCCCTCTGATAGAAGTGTCAACCCTTCTACTGTTGTCCCCCCTGTCGGGGCAATAGAGATATCTTCTATTCCTAAAATGTCTAGTCGTCCTCCAGTTAAAGGTTGGAGAGTGATCACTACCAAGGTCAGTCGTCGTAAGCTACCACCAAACCTTCCTGTAGCTCCTATTAATGGTGTTTCATTCCACTCAGAATACAGTATGCACAAGTGGAAATATGTTGTGCAAAGACGCATGGCTAATGAGATGAACATTTTGGATAAACATCAGTCCTGTACCCCATAA

Protein sequence

MVDLPTHSSAANQTDHAIDPHAPSDRSVNPSTVVPPVGAIEISSIPKMSSRPPVKGWRVITTKVSRRKLPPNLPVAPINGVSFHSEYSMHKWKYVVQRRMANEMNILDKHQSCTP

Homology

[Close]

BLAST of MELO3C020226 vs. NCBI nr
Match: TYK01604.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa])

HSP 1 Score: 228.4 bits (581), Expect = 3.1e-56
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MVDLPTHSSAANQTDHAIDPHAPSDRSVNPSTVVPPVGAIEISSIPKMSSRPPVKGWRVI 60
           MVDLPTHSSAANQTDHAIDPHAPSDRSVNPSTVVPPVGAIEISSIPKMSSRPPVKGWRVI
Sbjct: 55  MVDLPTHSSAANQTDHAIDPHAPSDRSVNPSTVVPPVGAIEISSIPKMSSRPPVKGWRVI 114

Query: 61  TTKVSRRKLPPNLPVAPINGVSFHSEYSMHKWKYVVQRRMANEMNILDKHQS 113
           TTKVSRRKLPPNLPVAPINGVSFHSEYSMHKWKYVVQRRMANEMNILDKHQS
Sbjct: 115 TTKVSRRKLPPNLPVAPINGVSFHSEYSMHKWKYVVQRRMANEMNILDKHQS 166

[Close]

BLAST of MELO3C020226 vs. NCBI nr
Match: KAA0033151.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK17083.1 flocculation protein FLO11-like [Cucumis melo var. makuwa])

HSP 1 Score: 92.8 bits (229), Expect = 2.0e-15
Identity = 40/64 (62.50%), Postives = 51/64 (79.69%), Query Frame = 0


Query: 51  RPPVKGWRVITTKVSRRKLPPNLPVAPINGVSFHSEYSMHKWKYVVQRRMANEMNILDKH 110
           RPP KG RV++TK  RRK+PPN+P  PI+GVSFH E   HKWKYVV+RR+A+E NI D++
Sbjct: 67  RPPTKGQRVVSTKARRRKVPPNVPSVPIDGVSFHYEEGAHKWKYVVKRRIADEANIADQY 126

Query: 111 QSCT 115
            SC+
Sbjct: 127 NSCS 130

[Close]

BLAST of MELO3C020226 vs. NCBI nr
Match: XP_008452349.1 (PREDICTED: uncharacterized protein LOC103493408 [Cucumis melo])

HSP 1 Score: 92.8 bits (229), Expect = 2.0e-15
Identity = 52/106 (49.06%), Postives = 69/106 (65.09%), Query Frame = 0


Query: 8   SSAANQTDHAIDPHAPSDRSVNPSTVVPPVGAIEISSIPKMSSRPPVKGWRVITTKVSRR 67
           SS  N T        PSD S++ S    P   ++ SS P+ S   PV+G RVI+TKV RR
Sbjct: 34  SSLENHTSKPQSTEGPSDSSISMS----PPRHVDSSSRPRHS---PVRGQRVISTKVGRR 93

Query: 68  KLPPNLPVAPINGVSFHSEYSMHKWKYVVQRRMANEMNILDKHQSC 114
           K+P N+P  PI+GVSFHSE   H+WKYVV+ R+A+E NI D+++SC
Sbjct: 94  KIPLNVPHMPIDGVSFHSEEGAHRWKYVVRCRIADEANIFDQYRSC 132

[Close]

BLAST of MELO3C020226 vs. NCBI nr
Match: KAA0060525.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK00765.1 flocculation protein FLO11-like [Cucumis melo var. makuwa])

HSP 1 Score: 92.4 bits (228), Expect = 2.7e-15
Identity = 53/106 (50.00%), Postives = 68/106 (64.15%), Query Frame = 0


Query: 8   SSAANQTDHAIDPHAPSDRSVNPSTVVPPVGAIEISSIPKMSSRPPVKGWRVITTKVSRR 67
           SS  N T        PSD S++ S    P   +  SS P+ S   PV+G RVI+TKV RR
Sbjct: 90  SSLENHTSKPQSTEGPSDSSISMS----PPRHVGSSSRPRHS---PVRGQRVISTKVGRR 149

Query: 68  KLPPNLPVAPINGVSFHSEYSMHKWKYVVQRRMANEMNILDKHQSC 114
           K+P N+P  PI+GVSFHSE   HKWKYVV+ R+A+E NI D+++SC
Sbjct: 150 KIPLNVPHMPIDGVSFHSEEGAHKWKYVVRCRIADEANIFDQYRSC 188

[Close]

BLAST of MELO3C020226 vs. NCBI nr
Match: TYK27163.1 (cell wall protein RBR3-like [Cucumis melo var. makuwa])

HSP 1 Score: 90.1 bits (222), Expect = 1.3e-14
Identity = 45/100 (45.00%), Postives = 64/100 (64.00%), Query Frame = 0


Query: 14  TDHAIDPHAPSDRSVNPSTVVPPVGAIEISSIPKMSSRPPVKGWRVITTKVSRRKLPPNL 73
           ++H+I+   P+  +     ++ PV  +     P+  SR      +VITTK   RK+PPN+
Sbjct: 135 SEHSIEVQEPNKGNEASRDILDPVSDVG-EDRPQKKSRKASTRPKVITTKTGHRKVPPNI 194

Query: 74  PVAPINGVSFHSEYSMHKWKYVVQRRMANEMNILDKHQSC 114
           P  PI+G+SFH E S+H+WKYVVQRR A+E+NI DKH SC
Sbjct: 195 PSIPIDGISFHLEESVHRWKYVVQRRFADEVNISDKHHSC 233

[Close]

BLAST of MELO3C020226 vs. ExPASy TrEMBL
Match: A0A5D3BR07 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002000 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.5e-56
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MVDLPTHSSAANQTDHAIDPHAPSDRSVNPSTVVPPVGAIEISSIPKMSSRPPVKGWRVI 60
           MVDLPTHSSAANQTDHAIDPHAPSDRSVNPSTVVPPVGAIEISSIPKMSSRPPVKGWRVI
Sbjct: 55  MVDLPTHSSAANQTDHAIDPHAPSDRSVNPSTVVPPVGAIEISSIPKMSSRPPVKGWRVI 114

Query: 61  TTKVSRRKLPPNLPVAPINGVSFHSEYSMHKWKYVVQRRMANEMNILDKHQS 113
           TTKVSRRKLPPNLPVAPINGVSFHSEYSMHKWKYVVQRRMANEMNILDKHQS
Sbjct: 115 TTKVSRRKLPPNLPVAPINGVSFHSEYSMHKWKYVVQRRMANEMNILDKHQS 166

[Close]

BLAST of MELO3C020226 vs. ExPASy TrEMBL
Match: A0A5A7SUK2 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1032G00110 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 9.9e-16
Identity = 40/64 (62.50%), Postives = 51/64 (79.69%), Query Frame = 0


Query: 51  RPPVKGWRVITTKVSRRKLPPNLPVAPINGVSFHSEYSMHKWKYVVQRRMANEMNILDKH 110
           RPP KG RV++TK  RRK+PPN+P  PI+GVSFH E   HKWKYVV+RR+A+E NI D++
Sbjct: 67  RPPTKGQRVVSTKARRRKVPPNVPSVPIDGVSFHYEEGAHKWKYVVKRRIADEANIADQY 126

Query: 111 QSCT 115
            SC+
Sbjct: 127 NSCS 130

[Close]

BLAST of MELO3C020226 vs. ExPASy TrEMBL
Match: A0A1S3BUF5 (uncharacterized protein LOC103493408 OS=Cucumis melo OX=3656 GN=LOC103493408 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 9.9e-16
Identity = 52/106 (49.06%), Postives = 69/106 (65.09%), Query Frame = 0


Query: 8   SSAANQTDHAIDPHAPSDRSVNPSTVVPPVGAIEISSIPKMSSRPPVKGWRVITTKVSRR 67
           SS  N T        PSD S++ S    P   ++ SS P+ S   PV+G RVI+TKV RR
Sbjct: 34  SSLENHTSKPQSTEGPSDSSISMS----PPRHVDSSSRPRHS---PVRGQRVISTKVGRR 93

Query: 68  KLPPNLPVAPINGVSFHSEYSMHKWKYVVQRRMANEMNILDKHQSC 114
           K+P N+P  PI+GVSFHSE   H+WKYVV+ R+A+E NI D+++SC
Sbjct: 94  KIPLNVPHMPIDGVSFHSEEGAHRWKYVVRCRIADEANIFDQYRSC 132

[Close]

BLAST of MELO3C020226 vs. ExPASy TrEMBL
Match: A0A5D3BNR5 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00290 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.3e-15
Identity = 53/106 (50.00%), Postives = 68/106 (64.15%), Query Frame = 0


Query: 8   SSAANQTDHAIDPHAPSDRSVNPSTVVPPVGAIEISSIPKMSSRPPVKGWRVITTKVSRR 67
           SS  N T        PSD S++ S    P   +  SS P+ S   PV+G RVI+TKV RR
Sbjct: 90  SSLENHTSKPQSTEGPSDSSISMS----PPRHVGSSSRPRHS---PVRGQRVISTKVGRR 149

Query: 68  KLPPNLPVAPINGVSFHSEYSMHKWKYVVQRRMANEMNILDKHQSC 114
           K+P N+P  PI+GVSFHSE   HKWKYVV+ R+A+E NI D+++SC
Sbjct: 150 KIPLNVPHMPIDGVSFHSEEGAHKWKYVVRCRIADEANIFDQYRSC 188

[Close]

BLAST of MELO3C020226 vs. ExPASy TrEMBL
Match: A0A5D3DU39 (Cell wall protein RBR3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold236G00080 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 6.4e-15
Identity = 45/100 (45.00%), Postives = 64/100 (64.00%), Query Frame = 0


Query: 14  TDHAIDPHAPSDRSVNPSTVVPPVGAIEISSIPKMSSRPPVKGWRVITTKVSRRKLPPNL 73
           ++H+I+   P+  +     ++ PV  +     P+  SR      +VITTK   RK+PPN+
Sbjct: 135 SEHSIEVQEPNKGNEASRDILDPVSDVG-EDRPQKKSRKASTRPKVITTKTGHRKVPPNI 194

Query: 74  PVAPINGVSFHSEYSMHKWKYVVQRRMANEMNILDKHQSC 114
           P  PI+G+SFH E S+H+WKYVVQRR A+E+NI DKH SC
Sbjct: 195 PSIPIDGISFHLEESVHRWKYVVQRRFADEVNISDKHHSC 233

The following BLAST results are available for this feature:

BLAST of MELO3C020226 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK01604.1	3.1e-56	100.00	flocculation protein FLO11-like [Cucumis melo var. makuwa]	[more]
KAA0033151.1	2.0e-15	62.50	flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK17083.1 flocculat...	[more]
XP_008452349.1	2.0e-15	49.06	PREDICTED: uncharacterized protein LOC103493408 [Cucumis melo]	[more]
KAA0060525.1	2.7e-15	50.00	flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK00765.1 flocculat...	[more]
TYK27163.1	1.3e-14	45.00	cell wall protein RBR3-like [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C020226 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C020226 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BR07	1.5e-56	100.00	Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7SUK2	9.9e-16	62.50	Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3BUF5	9.9e-16	49.06	uncharacterized protein LOC103493408 OS=Cucumis melo OX=3656 GN=LOC103493408 PE=...	[more]
A0A5D3BNR5	1.3e-15	50.00	Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3DU39	6.4e-15	45.00	Cell wall protein RBR3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]

BLAST of MELO3C020226 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C020226.1	MELO3C020226.1	mRNA