MELO3C020203 (gene) Melon (DHL92) v4

Overview
NameMELO3C020203
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr06: 15972452 .. 15972640 (+)
RNA-Seq ExpressionMELO3C020203
SyntenyMELO3C020203
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGGGAAACAAGATCTCTCTGCCAAGTCAAGCCAATCTGGTGAAGAGGCTGGGAATATCCAATCCAACGGTCCTATGTCGGAGCAAAGAAAGGAAGAAAAGGTATTAAAGACAGTGGTGATCAATGGAGTTGTAGTTCAGTTACCTAAGGACGAGTTGGGTGATCTATTGGCAATAGTATCTTAG

mRNA sequence

ATGTTTGGGAAACAAGATCTCTCTGCCAAGTCAAGCCAATCTGGTGAAGAGGCTGGGAATATCCAATCCAACGGTCCTATGTCGGAGCAAAGAAAGGAAGAAAAGGTATTAAAGACAGTGGTGATCAATGGAGTTGTAGTTCAGTTACCTAAGGACGAGTTGGGTGATCTATTGGCAATAGTATCTTAG

Coding sequence (CDS)

ATGTTTGGGAAACAAGATCTCTCTGCCAAGTCAAGCCAATCTGGTGAAGAGGCTGGGAATATCCAATCCAACGGTCCTATGTCGGAGCAAAGAAAGGAAGAAAAGGTATTAAAGACAGTGGTGATCAATGGAGTTGTAGTTCAGTTACCTAAGGACGAGTTGGGTGATCTATTGGCAATAGTATCTTAG

Protein sequence

MFGKQDLSAKSSQSGEEAGNIQSNGPMSEQRKEEKVLKTVVINGVVVQLPKDELGDLLAIVS
Homology
BLAST of MELO3C020203 vs. NCBI nr
Match: KAA0032800.1 (hypothetical protein E6C27_scaffold708G00510 [Cucumis melo var. makuwa] >TYK30358.1 hypothetical protein E5676_scaffold575G00220 [Cucumis melo var. makuwa])

HSP 1 Score: 109.4 bits (272), Expect = 1.1e-20
Identity = 59/61 (96.72%), Postives = 59/61 (96.72%), Query Frame = 0

Query: 1  MFGKQDLSAKSSQSGEEAGNIQSNGPMSEQRKEEKVLKTVVINGVVVQLPKDELGDLLAI 60
          MFGKQDLSAKSSQSGEEAGNIQSNGPMSEQRKEEK LKTVVINGV VQLPKDELGDLLAI
Sbjct: 1  MFGKQDLSAKSSQSGEEAGNIQSNGPMSEQRKEEKALKTVVINGVEVQLPKDELGDLLAI 60

Query: 61 V 62
          V
Sbjct: 61 V 61

BLAST of MELO3C020203 vs. NCBI nr
Match: KAA0033147.1 (hypothetical protein E6C27_scaffold269G002910 [Cucumis melo var. makuwa] >TYK17087.1 hypothetical protein E5676_scaffold1032G00150 [Cucumis melo var. makuwa])

HSP 1 Score: 57.8 bits (138), Expect = 3.9e-05
Identity = 36/67 (53.73%), Postives = 46/67 (68.66%), Query Frame = 0

Query: 1  MFGKQDLS------AKSSQSGEEAGNIQSNGPMSEQRKEEKVLKTVVINGVVVQLPKDEL 60
          MFGKQ L        K+S S E A    S+G +SEQRKE++ LK V+INGV +QL +D+L
Sbjct: 1  MFGKQALKKYQGTVGKASLSNEGAEKTPSDGLVSEQRKEKRPLKMVIINGVEIQLTEDKL 60

Query: 61 GDLLAIV 62
          GDLLAI+
Sbjct: 61 GDLLAII 67

BLAST of MELO3C020203 vs. ExPASy TrEMBL
Match: A0A5A7SPH7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold575G00220 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.5e-21
Identity = 59/61 (96.72%), Postives = 59/61 (96.72%), Query Frame = 0

Query: 1  MFGKQDLSAKSSQSGEEAGNIQSNGPMSEQRKEEKVLKTVVINGVVVQLPKDELGDLLAI 60
          MFGKQDLSAKSSQSGEEAGNIQSNGPMSEQRKEEK LKTVVINGV VQLPKDELGDLLAI
Sbjct: 1  MFGKQDLSAKSSQSGEEAGNIQSNGPMSEQRKEEKALKTVVINGVEVQLPKDELGDLLAI 60

Query: 61 V 62
          V
Sbjct: 61 V 61

BLAST of MELO3C020203 vs. ExPASy TrEMBL
Match: A0A5A7SUZ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1032G00150 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.9e-05
Identity = 36/67 (53.73%), Postives = 46/67 (68.66%), Query Frame = 0

Query: 1  MFGKQDLS------AKSSQSGEEAGNIQSNGPMSEQRKEEKVLKTVVINGVVVQLPKDEL 60
          MFGKQ L        K+S S E A    S+G +SEQRKE++ LK V+INGV +QL +D+L
Sbjct: 1  MFGKQALKKYQGTVGKASLSNEGAEKTPSDGLVSEQRKEKRPLKMVIINGVEIQLTEDKL 60

Query: 61 GDLLAIV 62
          GDLLAI+
Sbjct: 61 GDLLAII 67

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0032800.11.1e-2096.72hypothetical protein E6C27_scaffold708G00510 [Cucumis melo var. makuwa] >TYK3035... [more]
KAA0033147.13.9e-0553.73hypothetical protein E6C27_scaffold269G002910 [Cucumis melo var. makuwa] >TYK170... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SPH75.5e-2196.72Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7SUZ41.9e-0553.73Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020203.1MELO3C020203.1mRNA