MELO3C020014 (gene) Melon (DHL92) v4

Overview


Name	MELO3C020014
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	transcription elongation factor TFIIS
Location	chr03: 19083622 .. 19085867 (-)
RNA-Seq Expression	MELO3C020014
Synteny	MELO3C020014

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCTCGTTTCAATTTCCTTACTTCCTCCGCCGCCGTCTCTCTGCCGAAAAGGAATTTTTCTGGACCCGATTCTGATTGATTTTCCTTTCTGCTGTTCTCCGTCTTCACTGCTTTAGTTCCTATAGCGAGGGTTTTTGCCGTCGGCGATTCAGATCTCTGTAAGTGATACTCATTCGAATCGGTATTTGGATGTCTTTTGACTCGTTGCTTTTCCTTCGCTTGTTCATTGAGAAAAGAAGTTGATTCGATTTTGATTGCGAAACCCCTTTTTTCTGATCATGCGTTTGTTTATTTGTATCTTTATGTTTTTTTTTTTTTTTTTTGTGGTTGTTGGGATCTGATCGTTCTTTTCTTCGAATGTGGTGGATAGATAATATAAAAAAATCCGAGTTGGCGGTGACTCGATGGAGAATGAGCTGGTGGAATTGTTTGAAGCGGCGAAGAAGGCTGCAGATGCCGCTGCAGCACCATCAAATGATGGGGGAGCCGAAGAAAGTCGTTGCCTTGATGCCCTAAGGCAGCTCAAGAAATTCCCTGTAACTTATCAAATCCTTGTTTCTACTCAGGTTTTCTTCTCATTCGACTTGAAATTTGTTCTTTTGTTGATGGTGGATGGACAGTGAGAATATAATTAGGAAATCATCCATGGTTTGGAATTTAGCTTAAATTCATCGTCTGCTTGCTTACGATTGGTTTCATAATGAATTGAGTTCACTCGATTTCATACGTTGCTTATGTCGTTGACGTTCACGTAACAAAGTCATCTCATTTGTGACCCTTGTCAATTTCGGGGAGAGAATAATGGCACGATATTCCTTGTTATTTAGGGCCCATTTGAATTAACTTTCTAAGTGTTTAGGAACATTTTTTTTCACCGAGAAACACTTATATAAACACTTTAGGAAGTCAATCCATCAATAATCTTTTGTTGCATCTTTGTAATTGAGATCACTTTGCCTGTATTGATTGCTTATATATATTGTTTCTCTATAGGTTGGGAAGCGTCTTCGGCACCTCACCAAACACCCCAAGAAGAAAATACAGGAGCATGCTTCTGACCTGATTGAGATGTGGAAGGAAATAGTAATCAAGGAGACTAATAAGAACAAGAAAAATGGAAATGCCAGCAGTAAAGATTCACCTAAAATTGGTTCTCCCAGTGTAGAGTCAGTTAAGGTGGAGAAGTTTCAAAAATCATCTTCCATGAAGGTTGAGAGAGTTTCCAAGGTCGAGCAATTCGATAGGAATGGTGCCACAAGCTCTGTTAAATATTCCAGATCCGAAAGCGCGGTCTCGGACAGTAGCTCTGTCAAGTTTGAGAAAACCGATTCAGTGGTCAAGGTTGAAAGGATAGTTAAAGAAGAGAAGAAACCATCAAGTGGCGCAGCTGCACCTCCAAAACTTACTTCCATGGTCAAATCAAAAGATGCTGCTCGAGACAAAATTAGAGAACTTCTCTTCGAGGCTTTCTCCAAAGTTCCTGGTGAGGCTGATGAAGATGTTATGGATGAAGTTAATGCAAGCGATCCCATCCGTGTTGCCATTTCTGTAGAATCGGTGATGTTTGAAAATTGGGGAGGTTCTACTGGTGCACAGAAGGCCAAGTATAGATCTATAATGTTTAACCTCAAGGATCCGAAGAACCCAGACTTTAGAAGAAAAGTTCTTCTAGGACTTATAAAGCCAGAAAGGATGATCAATATGACCACAGCCGATATGGCAAGCGATCAGAGAAAACGTGAAAATGAAGAGATTGCGCAAAAAGCTTTATTCGACTGCGAGCGTGGAGGTGCACCAAAAGCTACTACCGATCAATTCAAGTGTGGTCGATGTGGACAGCGCAAAACGACCTACTATCAATTACAGACGCGGAGTGCGGATGAACCTATGACGACTTTTGTAACTTGTGTAAACTGCAATAACCATTGGAAGTTCTGCTGAGTCTATTCTGAGATGCTGAAAATGTCAATTGTTTGAGCAATTAGTGTTATTTTGCCCTGACATTGGTTGCTGCAGAGTGTAATCTCGTTCCACATTGTTGCATTTAGAACGTAGGAGCTTCTCTATTGTAGGATGTCTTTAGTGCCATTTTATTAAGAAATTCAGTGTATAAACTTGTTTTGTTTGTTATTTTCTTTGGTATTTTTATGAGTTTCATACACTTGCAAGGATCTCTTTAACTCAACGTTCAACATAACTGTTTGTAGTGGATCGCCTTGTATTATTCATAATTCATAGTGGCCCCG

mRNA sequence

ACCTCGTTTCAATTTCCTTACTTCCTCCGCCGCCGTCTCTCTGCCGAAAAGGAATTTTTCTGGACCCGATTCTGATTGATTTTCCTTTCTGCTGTTCTCCGTCTTCACTGCTTTAGTTCCTATAGCGAGGGTTTTTGCCGTCGGCGATTCAGATCTCTATAATATAAAAAAATCCGAGTTGGCGGTGACTCGATGGAGAATGAGCTGGTGGAATTGTTTGAAGCGGCGAAGAAGGCTGCAGATGCCGCTGCAGCACCATCAAATGATGGGGGAGCCGAAGAAAGTCGTTGCCTTGATGCCCTAAGGCAGCTCAAGAAATTCCCTGTAACTTATCAAATCCTTGTTTCTACTCAGGTTGGGAAGCGTCTTCGGCACCTCACCAAACACCCCAAGAAGAAAATACAGGAGCATGCTTCTGACCTGATTGAGATGTGGAAGGAAATAGTAATCAAGGAGACTAATAAGAACAAGAAAAATGGAAATGCCAGCAGTAAAGATTCACCTAAAATTGGTTCTCCCAGTGTAGAGTCAGTTAAGGTGGAGAAGTTTCAAAAATCATCTTCCATGAAGGTTGAGAGAGTTTCCAAGGTCGAGCAATTCGATAGGAATGGTGCCACAAGCTCTGTTAAATATTCCAGATCCGAAAGCGCGGTCTCGGACAGTAGCTCTGTCAAGTTTGAGAAAACCGATTCAGTGGTCAAGGTTGAAAGGATAGTTAAAGAAGAGAAGAAACCATCAAGTGGCGCAGCTGCACCTCCAAAACTTACTTCCATGGTCAAATCAAAAGATGCTGCTCGAGACAAAATTAGAGAACTTCTCTTCGAGGCTTTCTCCAAAGTTCCTGGTGAGGCTGATGAAGATGTTATGGATGAAGTTAATGCAAGCGATCCCATCCGTGTTGCCATTTCTGTAGAATCGGTGATGTTTGAAAATTGGGGAGGTTCTACTGGTGCACAGAAGGCCAAGTATAGATCTATAATGTTTAACCTCAAGGATCCGAAGAACCCAGACTTTAGAAGAAAAGTTCTTCTAGGACTTATAAAGCCAGAAAGGATGATCAATATGACCACAGCCGATATGGCAAGCGATCAGAGAAAACGTGAAAATGAAGAGATTGCGCAAAAAGCTTTATTCGACTGCGAGCGTGGAGGTGCACCAAAAGCTACTACCGATCAATTCAAGTGTGGTCGATGTGGACAGCGCAAAACGACCTACTATCAATTACAGACGCGGAGTGCGGATGAACCTATGACGACTTTTGTAACTTGTGTAAACTGCAATAACCATTGGAAGTTCTGCTGAGTCTATTCTGAGATGCTGAAAATGTCAATTGTTTGAGCAATTAGTGTTATTTTGCCCTGACATTGGTTGCTGCAGAGTGTAATCTCGTTCCACATTGTTGCATTTAGAACGTAGGAGCTTCTCTATTGTAGGATGTCTTTAGTGCCATTTTATTAAGAAATTCAGTGTATAAACTTGTTTTGTTTGTTATTTTCTTTGGTATTTTTATGAGTTTCATACACTTGCAAGGATCTCTTTAACTCAACGTTCAACATAACTGTTTGTAGTGGATCGCCTTGTATTATTCATAATTCATAGTGGCCCCG

Coding sequence (CDS)

ATGGAGAATGAGCTGGTGGAATTGTTTGAAGCGGCGAAGAAGGCTGCAGATGCCGCTGCAGCACCATCAAATGATGGGGGAGCCGAAGAAAGTCGTTGCCTTGATGCCCTAAGGCAGCTCAAGAAATTCCCTGTAACTTATCAAATCCTTGTTTCTACTCAGGTTGGGAAGCGTCTTCGGCACCTCACCAAACACCCCAAGAAGAAAATACAGGAGCATGCTTCTGACCTGATTGAGATGTGGAAGGAAATAGTAATCAAGGAGACTAATAAGAACAAGAAAAATGGAAATGCCAGCAGTAAAGATTCACCTAAAATTGGTTCTCCCAGTGTAGAGTCAGTTAAGGTGGAGAAGTTTCAAAAATCATCTTCCATGAAGGTTGAGAGAGTTTCCAAGGTCGAGCAATTCGATAGGAATGGTGCCACAAGCTCTGTTAAATATTCCAGATCCGAAAGCGCGGTCTCGGACAGTAGCTCTGTCAAGTTTGAGAAAACCGATTCAGTGGTCAAGGTTGAAAGGATAGTTAAAGAAGAGAAGAAACCATCAAGTGGCGCAGCTGCACCTCCAAAACTTACTTCCATGGTCAAATCAAAAGATGCTGCTCGAGACAAAATTAGAGAACTTCTCTTCGAGGCTTTCTCCAAAGTTCCTGGTGAGGCTGATGAAGATGTTATGGATGAAGTTAATGCAAGCGATCCCATCCGTGTTGCCATTTCTGTAGAATCGGTGATGTTTGAAAATTGGGGAGGTTCTACTGGTGCACAGAAGGCCAAGTATAGATCTATAATGTTTAACCTCAAGGATCCGAAGAACCCAGACTTTAGAAGAAAAGTTCTTCTAGGACTTATAAAGCCAGAAAGGATGATCAATATGACCACAGCCGATATGGCAAGCGATCAGAGAAAACGTGAAAATGAAGAGATTGCGCAAAAAGCTTTATTCGACTGCGAGCGTGGAGGTGCACCAAAAGCTACTACCGATCAATTCAAGTGTGGTCGATGTGGACAGCGCAAAACGACCTACTATCAATTACAGACGCGGAGTGCGGATGAACCTATGACGACTTTTGTAACTTGTGTAAACTGCAATAACCATTGGAAGTTCTGCTGA

Protein sequence

MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLRHLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSVESVKVEKFQKSSSMKVERVSKVEQFDRNGATSSVKYSRSESAVSDSSSVKFEKTDSVVKVERIVKEEKKPSSGAAAPPKLTSMVKSKDAARDKIRELLFEAFSKVPGEADEDVMDEVNASDPIRVAISVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMTTADMASDQRKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC

Homology

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BLAST of MELO3C020014 vs. NCBI nr
Match: XP_008456781.1 (PREDICTED: transcription elongation factor TFIIS [Cucumis melo] >KAA0051978.1 transcription elongation factor TFIIS [Cucumis melo var. makuwa] >TYK04579.1 transcription elongation factor TFIIS [Cucumis melo var. makuwa])

HSP 1 Score: 705.7 bits (1820), Expect = 2.1e-199
Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0


Query: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60
           MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR
Sbjct: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 61  HLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSVESVKVEKFQ 120
           HLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSVESVKVEKFQ
Sbjct: 61  HLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSVESVKVEKFQ 120

Query: 121 KSSSMKVERVSKVEQFDRNGATSSVKYSRSESAVSDSSSVKFEKTDSVVKVERIVKEEKK 180
           KSSSMKVERVSKVEQFDRNGATSSVKYSRSESAVSDSSSVKFEKTDSVVKVERIVKEEKK
Sbjct: 121 KSSSMKVERVSKVEQFDRNGATSSVKYSRSESAVSDSSSVKFEKTDSVVKVERIVKEEKK 180

Query: 181 PSSGAAAPPKLTSMVKSKDAARDKIRELLFEAFSKVPGEADEDVMDEVNASDPIRVAISV 240
           PSSGAAAPPKLTSMVKSKDAARDKIRELLFEAFSKVPGEADEDVMDEVNASDPIRVAISV
Sbjct: 181 PSSGAAAPPKLTSMVKSKDAARDKIRELLFEAFSKVPGEADEDVMDEVNASDPIRVAISV 240

Query: 241 ESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMTTADMASDQ 300
           ESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMTTADMASDQ
Sbjct: 241 ESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMTTADMASDQ 300

Query: 301 RKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCV 360
           RKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCV
Sbjct: 301 RKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCV 360

Query: 361 NCNNHWKFC 370
           NCNNHWKFC
Sbjct: 361 NCNNHWKFC 369

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BLAST of MELO3C020014 vs. NCBI nr
Match: XP_004138392.1 (transcription elongation factor TFIIS [Cucumis sativus] >KGN45841.1 hypothetical protein Csa_005416 [Cucumis sativus])

HSP 1 Score: 686.8 bits (1771), Expect = 1.0e-193
Identity = 355/369 (96.21%), Postives = 364/369 (98.64%), Query Frame = 0


Query: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60
           MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR
Sbjct: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 61  HLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSVESVKVEKFQ 120
           HLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPS ESVKVEKFQ
Sbjct: 61  HLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSAESVKVEKFQ 120

Query: 121 KSSSMKVERVSKVEQFDRNGATSSVKYSRSESAVSDSSSVKFEKTDSVVKVERIVKEEKK 180
           KSSSMKVERVSKVEQFDRNGATSSVKYS+SES VS+ +SVK EKTDS+VKVER+VKEEKK
Sbjct: 121 KSSSMKVERVSKVEQFDRNGATSSVKYSKSESVVSERNSVKVEKTDSMVKVERVVKEEKK 180

Query: 181 PSSGAAAPPKLTSMVKSKDAARDKIRELLFEAFSKVPGEADEDVMDEVNASDPIRVAISV 240
           PSSGAAAPPKLTSM+KSKDAARDKIRELLFEAFSKVPGEADE+ MDEVNASDPIRVA+SV
Sbjct: 181 PSSGAAAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEEFMDEVNASDPIRVAVSV 240

Query: 241 ESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMTTADMASDQ 300
           ESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINM+TADMASDQ
Sbjct: 241 ESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMSTADMASDQ 300

Query: 301 RKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCV 360
           RKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCV
Sbjct: 301 RKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCV 360

Query: 361 NCNNHWKFC 370
           NCNNHWKFC
Sbjct: 361 NCNNHWKFC 369

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BLAST of MELO3C020014 vs. NCBI nr
Match: XP_038884917.1 (transcription elongation factor TFIIS [Benincasa hispida])

HSP 1 Score: 665.2 bits (1715), Expect = 3.2e-187
Identity = 347/375 (92.53%), Postives = 357/375 (95.20%), Query Frame = 0


Query: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60
           MENELVELF+AAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR
Sbjct: 1   MENELVELFQAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 61  HLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSVESVKVEKFQ 120
           HLTKHPKKKIQE+ASDL+EMWKEIVIKETNKNKKNGN + KDSPKIGSPS ESVKVEKFQ
Sbjct: 61  HLTKHPKKKIQEYASDLVEMWKEIVIKETNKNKKNGNGNCKDSPKIGSPSAESVKVEKFQ 120

Query: 121 KSSSMKVERVSKVEQFDRNGATSSVKYSRSESAVSDSSSVKFEKTDSVVKVERIVKEE-- 180
           KSSSMKVERVSKVEQFD+NGAT SVKYSR ESAVS+ +SVK EKTDS VKVE  VKEE  
Sbjct: 121 KSSSMKVERVSKVEQFDKNGATGSVKYSRLESAVSERNSVKVEKTDSAVKVEGTVKEERR 180

Query: 181 ----KKPSSGAAAPPKLTSMVKSKDAARDKIRELLFEAFSKVPGEADEDVMDEVNASDPI 240
               KKPS G AAPPKLTSM+KSKDAARDKIRELLFEAFSKVPGEADEDVMDEVNASDPI
Sbjct: 181 ISIDKKPSGGTAAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEDVMDEVNASDPI 240

Query: 241 RVAISVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMTTA 300
           RVA+SVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINM+TA
Sbjct: 241 RVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMSTA 300

Query: 301 DMASDQRKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMT 360
           DMASDQRKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMT
Sbjct: 301 DMASDQRKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMT 360

Query: 361 TFVTCVNCNNHWKFC 370
           TFVTCVNCNNHWKFC
Sbjct: 361 TFVTCVNCNNHWKFC 375

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BLAST of MELO3C020014 vs. NCBI nr
Match: XP_023531955.1 (transcription elongation factor TFIIS-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 650.2 bits (1676), Expect = 1.1e-182
Identity = 340/374 (90.91%), Postives = 355/374 (94.92%), Query Frame = 0


Query: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60
           ME ELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR
Sbjct: 1   MEKELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 61  HLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSVESVKVEKFQ 120
           HLTKHPKKKIQ++ASDLIEMWK+IVIKETNKNKKNGN +SK++ KIGSPS ESVKVE  Q
Sbjct: 61  HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKETSKIGSPSAESVKVENLQ 120

Query: 121 KSSSMKVERVSKVEQFDRNGATSSVKYSRSESAVSDSSSVKFEKTDSVVKVERIVKEEKK 180
           KSSSMKVERVSKVEQFDRNG+TSSVKYSRS SAVS+ +SVK EKTDSVVKVER+VKEEKK
Sbjct: 121 KSSSMKVERVSKVEQFDRNGSTSSVKYSRSASAVSEKNSVKVEKTDSVVKVERMVKEEKK 180

Query: 181 PS-----SGAAAPPKLTSMVKSKDAARDKIRELLFEAFSKVPGEADEDVMDEVNASDPIR 240
            S     SGAA PPKLTSM+KSKDAARDKIRELL EAFSKVPGEADEDVMDEVNASDPIR
Sbjct: 181 ISIEKKPSGAAGPPKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDVMDEVNASDPIR 240

Query: 241 VAISVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMTTAD 300
           VA+SVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERM N++T D
Sbjct: 241 VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTTD 300

Query: 301 MASDQRKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT 360
           MASDQRKRENEEIAQKALF+CERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT
Sbjct: 301 MASDQRKRENEEIAQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTT 360

Query: 361 FVTCVNCNNHWKFC 370
           FVTCVNCNNHWKFC
Sbjct: 361 FVTCVNCNNHWKFC 374

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BLAST of MELO3C020014 vs. NCBI nr
Match: KAG6578486.1 (Transcription elongation factor TFIIS, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 649.4 bits (1674), Expect = 1.8e-182
Identity = 339/375 (90.40%), Postives = 352/375 (93.87%), Query Frame = 0


Query: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60
           MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR
Sbjct: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 61  HLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSVESVKVEKFQ 120
           HLTKHPKKKIQ +ASDLIE+WKEIVIKETNKNKKNGN   K+SPKIGSPS ESVKVEKF+
Sbjct: 61  HLTKHPKKKIQNYASDLIEIWKEIVIKETNKNKKNGNIDCKESPKIGSPSAESVKVEKFR 120

Query: 121 KSSSMKVERVSKVEQFDRNGATSSVKYSRSESAVSDSSSVKFEKTDSVVKVERIVKE--- 180
           KSSSMKVERVS+VEQFDRNG TSS K+SRSES +S  +SVK EKTDSVVKVERIVKE   
Sbjct: 121 KSSSMKVERVSQVEQFDRNGVTSSAKFSRSESDISGKNSVKVEKTDSVVKVERIVKEEKR 180

Query: 181 ---EKKPSSGAAAPPKLTSMVKSKDAARDKIRELLFEAFSKVPGEADEDVMDEVNASDPI 240
              EKKPSSG  APPKLTSM+KSKDAARDKIRELLFEAFSKVP EADEDVMDEVNASDPI
Sbjct: 181 ISIEKKPSSGPDAPPKLTSMIKSKDAARDKIRELLFEAFSKVPSEADEDVMDEVNASDPI 240

Query: 241 RVAISVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMTTA 300
           RVA+SVESVMFENWGGSTG+QK KYRSIMFNLKDPKNPDFRRKVLLGLIKPER+INM+TA
Sbjct: 241 RVAVSVESVMFENWGGSTGSQKTKYRSIMFNLKDPKNPDFRRKVLLGLIKPERLINMSTA 300

Query: 301 DMASDQRKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMT 360
           DMASDQRKRENEEI QKALFDCER GAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMT
Sbjct: 301 DMASDQRKRENEEIEQKALFDCERAGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMT 360

Query: 361 TFVTCVNCNNHWKFC 370
           TFVTCVNCNNHWKFC
Sbjct: 361 TFVTCVNCNNHWKFC 375

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BLAST of MELO3C020014 vs. ExPASy Swiss-Prot
Match: Q9ZVH8 (Transcription elongation factor TFIIS OS=Arabidopsis thaliana OX=3702 GN=TFIIS PE=1 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 2.9e-106
Identity = 213/380 (56.05%), Postives = 267/380 (70.26%), Query Frame = 0


Query: 1   MENELVELFEAAKKAADAAAAPS-NDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRL 60
           ME++L++LFE AKKAADAAA       G E S+C+DAL+QLKKFPVTY  LV+TQVGK+L
Sbjct: 1   MESDLIDLFEGAKKAADAAALDGVTSSGPEVSQCIDALKQLKKFPVTYDTLVATQVGKKL 60

Query: 61  RHLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSVES------ 120
           R L KHP + I+  A+DL+E+WK++VI+ET K KK    +     K+    VE       
Sbjct: 61  RSLAKHPVEDIKSVATDLLEIWKKVVIEETAKAKKTEGTNGCKEAKVNKMDVEKPSNPAP 120

Query: 121 VKVEKFQKSSSMKVERVSKVEQFDRNGATSSVKYSRSESAVSDSSSVKFEKTDSVVKVER 180
           VKV+K Q+  S K  +V + E    N   + VK  R    +  ++  K +     VK E+
Sbjct: 121 VKVQKLQRGDSAKSIKVERKE--PDNKVVTGVKIERKVPDIKVTNGTKIDYRGQAVKDEK 180

Query: 181 IVKEE----KKPSSGAAAPPKLTSMVKSKDAARDKIRELLFEAFSKVPGEADEDVMDEVN 240
           + K+     K P+  A APPKLT+M+K  D  RDKIRELL EA  +V GEAD+   + VN
Sbjct: 181 VSKDNQSSMKAPAKAANAPPKLTAMLKCNDPVRDKIRELLVEALCRVAGEADDYERESVN 240

Query: 241 ASDPIRVAISVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMI 300
           ASDP+RVA+SVES+MFE  G STGAQK KYRSIMFNL+D  NPD RR+VL G I PE++I
Sbjct: 241 ASDPLRVAVSVESLMFEKLGRSTGAQKLKYRSIMFNLRDSNNPDLRRRVLTGEISPEKLI 300

Query: 301 NMTTADMASDQRKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSA 360
            ++  DMASD+RK+EN +I +KALFDCERG A KA+TDQFKCGRCGQRK TYYQ+QTRSA
Sbjct: 301 TLSAEDMASDKRKQENNQIKEKALFDCERGLAAKASTDQFKCGRCGQRKCTYYQMQTRSA 360

Query: 361 DEPMTTFVTCVNCNNHWKFC 370
           DEPMTT+VTCVNC+NHWKFC
Sbjct: 361 DEPMTTYVTCVNCDNHWKFC 378

[Close]

BLAST of MELO3C020014 vs. ExPASy Swiss-Prot
Match: P20232 (Transcription elongation factor S-II OS=Drosophila melanogaster OX=7227 GN=TfIIS PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.7e-29
Identity = 112/364 (30.77%), Postives = 158/364 (43.41%), Query Frame = 0


Query: 7   ELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLRHLTKHP 66
           E+F   KK +  A+      G  + + LD L+ L+   +   IL  T++G  +  L K  
Sbjct: 6   EVFRIQKKMSKMAS-----DGTGQDQALDLLKALQTLNINLDILTKTRIGMTVNELRKSS 65

Query: 67  K-KKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSVESVKVEKFQKSSSM 126
           K  ++   A  LI+ WK  +                 SP   +P+  S K      SS+ 
Sbjct: 66  KDDEVIALAKTLIKNWKRFLA----------------SPAPTTPNNSSAKEGSSNNSSAS 125

Query: 127 KVERVSKVEQFDRNGATSSVKYSRSESAVSDSSSVKFEKTDSVVKVERIVKEEKKPSSGA 186
           K              +TS+ K S S S    SSS    K D   K      +   PS G 
Sbjct: 126 K--------------STSAAKSSSSISGKDKSSSSSSSK-DKEKKGSTSSSQTSFPSGGM 185

Query: 187 AAPPKLTSMVKSKDAARDKIRELLFEAFSKVPGEADEDVMDEVNASDPIRVAISVESVMF 246
                        DA R K RE+L  A     GE  E         +P  +A  +E  ++
Sbjct: 186 T------------DAVRIKCREMLATALK--IGEVPE------GCGEPEEMAAELEDAIY 245

Query: 247 ENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMTTADMASDQRKREN 306
             +  +    K + RS + NLKDPKNP  R   + G +  +++  MT  +MASD+ K+  
Sbjct: 246 SEFNNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLR 305

Query: 307 EEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNH 366
           E+  ++A+ D +        TD  KC +C +R  TY QLQTRSADEPMTTFV C  C N 
Sbjct: 306 EKFVKEAINDAQLATVQGTKTDLLKCAKCKKRNCTYNQLQTRSADEPMTTFVMCNECGNR 313

Query: 367 WKFC 370
           WKFC
Sbjct: 366 WKFC 313

[Close]

BLAST of MELO3C020014 vs. ExPASy Swiss-Prot
Match: Q2KI09 (Transcription elongation factor A protein 3 OS=Bos taurus OX=9913 GN=TCEA3 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.9e-29
Identity = 110/367 (29.97%), Postives = 171/367 (46.59%), Query Frame = 0


Query: 7   ELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLRHLTKH- 66
           EL   AKK     A    +G       LD L++L  + ++ Q+L +T++G  +  + KH 
Sbjct: 6   ELLRIAKKLEKMVARKKTEG------ALDLLKKLGSWQMSIQLLQTTRIGVAVNGVRKHC 65

Query: 67  PKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSVESVKVEKFQKSSSM 126
             K++   A  LI  WK+++        + G    K   K      + +    ++  +S+
Sbjct: 66  SNKEVVALAKVLIRNWKQLLDSPATPKGEKGEERVKAKKK-----EKGLDCSDWKPETSL 125

Query: 127 KVERVSKVEQ-FDRNGATSSVKYSRSESAVSDSSSVKFEKTDSVVKVERIVKEEKKPSSG 186
              R  +VE+  DR  +  S       SA S       E+++S        +    PSS 
Sbjct: 126 SPPRKKRVEEPKDRRDSVDS-----KSSATSSPKRPSMERSNSSKSKAETPRTPSSPSSP 185

Query: 187 AAAPP--KLTSMVKSKDAARDKIRELLFEAFSKVPGEADEDVMDEVNASDPIRVAISVES 246
             AP    L     + D+ RDK  E+L  A      +AD+D  D     D  ++A  +E 
Sbjct: 186 TFAPSVCLLAPCYLTGDSVRDKCVEMLSAAL-----KADDDYKDYGVNCD--KMASEIED 245

Query: 247 VMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMTTADMASDQRK 306
            +++    +    + + RS + NLKDP+NP  RR VL G I    +  MT  +MASD+ +
Sbjct: 246 HIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELR 305

Query: 307 RENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNC 366
                + Q+A+ + +       TTD F+C +C ++  TY Q+QTRSADEPMTTFV C  C
Sbjct: 306 ELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNEC 349

Query: 367 NNHWKFC 370
            N WKFC
Sbjct: 366 GNRWKFC 349

[Close]

BLAST of MELO3C020014 vs. ExPASy Swiss-Prot
Match: Q4KLL0 (Transcription elongation factor A protein 1 OS=Rattus norvegicus OX=10116 GN=Tcea1 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 2.0e-27
Identity = 104/370 (28.11%), Postives = 164/370 (44.32%), Query Frame = 0


Query: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60
           ME+E+V +     K  D      N  GA     LD L++LK  P+T ++L ST++G  + 
Sbjct: 1   MEDEVVRI----AKKMDKMVQKKNAAGA-----LDLLKELKNIPMTLELLQSTRIGMSVN 60

Query: 61  HLTKH-PKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSVESVKVEKF 120
            + K    +++   A  LI+ WK+++         +G ++ KDS                
Sbjct: 61  AIRKQSTDEEVTSLAKSLIKSWKKLL---------DGPSTDKDS---------------- 120

Query: 121 QKSSSMKVERVSKVEQFDRNGATSSVKYSRSESAVSDSSSVKFEKTDSVVKVERIVKEEK 180
                         E+  +  A SS     +    S SS V   K ++  +   +    +
Sbjct: 121 --------------EEKKKEPAISSQNSPEAREESSSSSHVSSRKDETNARDTYVSSFPR 180

Query: 181 KPSSGAAAPPKLTSMVKSKDAARDKIRELLFEAFSKVPGEADEDVMDEVNASDPIRVAIS 240
            PS              + D+ R K RE+L  A         +D +     +D   +   
Sbjct: 181 APS--------------TSDSVRLKCREMLAAAL-----RTGDDYV--AIGADEEELGSQ 240

Query: 241 VESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMTTADMASD 300
           +E  +++    +    K + RS + NLKD KNP+ R+ VL G I P+    MT  +MASD
Sbjct: 241 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 300

Query: 301 QRKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTC 360
           + K   + + ++A+ + +        TD F CG+C ++  TY Q+QTRSADEPMTTFV C
Sbjct: 301 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVC 301

Query: 361 VNCNNHWKFC 370
             C N WKFC
Sbjct: 361 NECGNRWKFC 301

[Close]

BLAST of MELO3C020014 vs. ExPASy Swiss-Prot
Match: P23881 (Transcription elongation factor A protein 3 OS=Mus musculus OX=10090 GN=Tcea3 PE=1 SV=3)

HSP 1 Score: 124.8 bits (312), Expect = 2.0e-27
Identity = 111/369 (30.08%), Postives = 171/369 (46.34%), Query Frame = 0


Query: 7   ELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLRHLTKH- 66
           EL   AKK     +    +G       LD L++L    ++ Q+L +T++G  +  + KH 
Sbjct: 6   ELLRIAKKLEKMVSRKKTEG------ALDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHC 65

Query: 67  PKKKIQEHASDLIEMWKEIV-IKETNKNKKNGNASSKDSPKIGSP--SVESVKVEKFQKS 126
             K++   A  LI+ WK ++    T K ++     +K    +G      E+      +K 
Sbjct: 66  SDKEVVSLAKVLIKNWKRLLDSPRTTKGEREEREKAKKEKGLGCSDWKPEAGLSPPRKKG 125

Query: 127 SSMKVERVSKVEQFDRNGATSSVKYSRSESAVSDSSSVKFEKTDSVVKVERIVKEEKKPS 186
                 R   V+   R+  TSS K    E + S  S V+   T S             PS
Sbjct: 126 GGEPKTRRDSVD--SRSSTTSSPKRPSLERSNSSKSKVETPTTPS------------SPS 185

Query: 187 SGAAAPP--KLTSMVKSKDAARDKIRELLFEAFSKVPGEADEDVMDEVNASDPIRVAISV 246
           +   AP    L     + D+ RDK  E+L  A      +A+++  D     D  ++A  +
Sbjct: 186 TPTFAPAVCLLAPCYLTGDSVRDKCVEMLSAAL-----KAEDNFKDYGVNCD--KLASEI 245

Query: 247 ESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMTTADMASDQ 306
           E  +++    +    + + RS + NLKDP+NP  RR VL G I PE +  MT  +MASD+
Sbjct: 246 EDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDE 305

Query: 307 RKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCV 366
            +     + Q+A+ + +       TTD  +C +C ++  TY Q+QTRSADEPMTTFV C 
Sbjct: 306 LRELRNAMTQEAIREHQMAKTGGTTTDLLRCSKCKKKNCTYNQVQTRSADEPMTTFVLCN 347

Query: 367 NCNNHWKFC 370
            C N WKFC
Sbjct: 366 ECGNRWKFC 347

[Close]

BLAST of MELO3C020014 vs. ExPASy TrEMBL
Match: A0A5A7U9K1 (Transcription elongation factor TFIIS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G002160 PE=4 SV=1)

HSP 1 Score: 705.7 bits (1820), Expect = 1.0e-199
Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0


Query: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60
           MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR
Sbjct: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 61  HLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSVESVKVEKFQ 120
           HLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSVESVKVEKFQ
Sbjct: 61  HLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSVESVKVEKFQ 120

Query: 121 KSSSMKVERVSKVEQFDRNGATSSVKYSRSESAVSDSSSVKFEKTDSVVKVERIVKEEKK 180
           KSSSMKVERVSKVEQFDRNGATSSVKYSRSESAVSDSSSVKFEKTDSVVKVERIVKEEKK
Sbjct: 121 KSSSMKVERVSKVEQFDRNGATSSVKYSRSESAVSDSSSVKFEKTDSVVKVERIVKEEKK 180

Query: 181 PSSGAAAPPKLTSMVKSKDAARDKIRELLFEAFSKVPGEADEDVMDEVNASDPIRVAISV 240
           PSSGAAAPPKLTSMVKSKDAARDKIRELLFEAFSKVPGEADEDVMDEVNASDPIRVAISV
Sbjct: 181 PSSGAAAPPKLTSMVKSKDAARDKIRELLFEAFSKVPGEADEDVMDEVNASDPIRVAISV 240

Query: 241 ESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMTTADMASDQ 300
           ESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMTTADMASDQ
Sbjct: 241 ESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMTTADMASDQ 300

Query: 301 RKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCV 360
           RKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCV
Sbjct: 301 RKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCV 360

Query: 361 NCNNHWKFC 370
           NCNNHWKFC
Sbjct: 361 NCNNHWKFC 369

[Close]

BLAST of MELO3C020014 vs. ExPASy TrEMBL
Match: A0A1S3C448 (transcription elongation factor TFIIS OS=Cucumis melo OX=3656 GN=LOC103496629 PE=4 SV=1)

HSP 1 Score: 705.7 bits (1820), Expect = 1.0e-199
Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0


Query: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60
           MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR
Sbjct: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 61  HLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSVESVKVEKFQ 120
           HLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSVESVKVEKFQ
Sbjct: 61  HLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSVESVKVEKFQ 120

Query: 121 KSSSMKVERVSKVEQFDRNGATSSVKYSRSESAVSDSSSVKFEKTDSVVKVERIVKEEKK 180
           KSSSMKVERVSKVEQFDRNGATSSVKYSRSESAVSDSSSVKFEKTDSVVKVERIVKEEKK
Sbjct: 121 KSSSMKVERVSKVEQFDRNGATSSVKYSRSESAVSDSSSVKFEKTDSVVKVERIVKEEKK 180

Query: 181 PSSGAAAPPKLTSMVKSKDAARDKIRELLFEAFSKVPGEADEDVMDEVNASDPIRVAISV 240
           PSSGAAAPPKLTSMVKSKDAARDKIRELLFEAFSKVPGEADEDVMDEVNASDPIRVAISV
Sbjct: 181 PSSGAAAPPKLTSMVKSKDAARDKIRELLFEAFSKVPGEADEDVMDEVNASDPIRVAISV 240

Query: 241 ESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMTTADMASDQ 300
           ESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMTTADMASDQ
Sbjct: 241 ESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMTTADMASDQ 300

Query: 301 RKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCV 360
           RKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCV
Sbjct: 301 RKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCV 360

Query: 361 NCNNHWKFC 370
           NCNNHWKFC
Sbjct: 361 NCNNHWKFC 369

[Close]

BLAST of MELO3C020014 vs. ExPASy TrEMBL
Match: A0A0A0KDH9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014610 PE=4 SV=1)

HSP 1 Score: 686.8 bits (1771), Expect = 5.0e-194
Identity = 355/369 (96.21%), Postives = 364/369 (98.64%), Query Frame = 0


Query: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60
           MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR
Sbjct: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 61  HLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSVESVKVEKFQ 120
           HLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPS ESVKVEKFQ
Sbjct: 61  HLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSAESVKVEKFQ 120

Query: 121 KSSSMKVERVSKVEQFDRNGATSSVKYSRSESAVSDSSSVKFEKTDSVVKVERIVKEEKK 180
           KSSSMKVERVSKVEQFDRNGATSSVKYS+SES VS+ +SVK EKTDS+VKVER+VKEEKK
Sbjct: 121 KSSSMKVERVSKVEQFDRNGATSSVKYSKSESVVSERNSVKVEKTDSMVKVERVVKEEKK 180

Query: 181 PSSGAAAPPKLTSMVKSKDAARDKIRELLFEAFSKVPGEADEDVMDEVNASDPIRVAISV 240
           PSSGAAAPPKLTSM+KSKDAARDKIRELLFEAFSKVPGEADE+ MDEVNASDPIRVA+SV
Sbjct: 181 PSSGAAAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEEFMDEVNASDPIRVAVSV 240

Query: 241 ESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMTTADMASDQ 300
           ESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINM+TADMASDQ
Sbjct: 241 ESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMSTADMASDQ 300

Query: 301 RKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCV 360
           RKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCV
Sbjct: 301 RKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCV 360

Query: 361 NCNNHWKFC 370
           NCNNHWKFC
Sbjct: 361 NCNNHWKFC 369

[Close]

BLAST of MELO3C020014 vs. ExPASy TrEMBL
Match: A0A6J1BWY6 (transcription elongation factor TFIIS OS=Momordica charantia OX=3673 GN=LOC111006416 PE=4 SV=1)

HSP 1 Score: 644.8 bits (1662), Expect = 2.2e-181
Identity = 337/377 (89.39%), Postives = 354/377 (93.90%), Query Frame = 0


Query: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60
           MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR
Sbjct: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 61  HLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSVESVKVEKFQ 120
           HLTKHPKKKIQ++ASDLIEMWKEIVIKETNKNKKNGN + K+SPKIGSPS ESVKVEKFQ
Sbjct: 61  HLTKHPKKKIQDYASDLIEMWKEIVIKETNKNKKNGNGNCKESPKIGSPSAESVKVEKFQ 120

Query: 121 KSSSMKVERVSKVEQFDRNGATSSVKYSRSESAVSDSSSVKFEKTDSV--VKVERIVKEE 180
           KSSSMKVERVSKVEQ DRNG TSSVKYSRSES +S+ + VK EKTDS+  VK ER+VKEE
Sbjct: 121 KSSSMKVERVSKVEQSDRNGTTSSVKYSRSESVISEKNIVKVEKTDSLEKVKAERVVKEE 180

Query: 181 KK------PSSGAAAPPKLTSMVKSKDAARDKIRELLFEAFSKVPGEADEDVMDEVNASD 240
           KK      PSSG AAPPKLTSM+KSKDAARDKIRELL EAFSKVPGEADEDV+DEVNASD
Sbjct: 181 KKISIDKRPSSGTAAPPKLTSMIKSKDAARDKIRELLCEAFSKVPGEADEDVIDEVNASD 240

Query: 241 PIRVAISVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMT 300
           P+RVA+SVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRR VL+G IKPER+INM+
Sbjct: 241 PVRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRNVLVGHIKPERLINMS 300

Query: 301 TADMASDQRKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEP 360
           TA+MASDQRKRENEEI QKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEP
Sbjct: 301 TAEMASDQRKRENEEIEQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEP 360

Query: 361 MTTFVTCVNCNNHWKFC 370
           MTTFVTCVNCNNHWKFC
Sbjct: 361 MTTFVTCVNCNNHWKFC 377

[Close]

BLAST of MELO3C020014 vs. ExPASy TrEMBL
Match: A0A6J1FF11 (transcription elongation factor TFIIS-like OS=Cucurbita moschata OX=3662 GN=LOC111444888 PE=4 SV=1)

HSP 1 Score: 644.8 bits (1662), Expect = 2.2e-181
Identity = 336/375 (89.60%), Postives = 351/375 (93.60%), Query Frame = 0


Query: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60
           MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR
Sbjct: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 61  HLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSVESVKVEKFQ 120
           HLTKHPKKKIQ +ASDLIE+WKEIVIK+TNKNKKNGN   ++SPKIGSPS ESVKVEKF+
Sbjct: 61  HLTKHPKKKIQNYASDLIEIWKEIVIKDTNKNKKNGNIDCEESPKIGSPSAESVKVEKFR 120

Query: 121 KSSSMKVERVSKVEQFDRNGATSSVKYSRSESAVSDSSSVKFEKTDSVVKVERIVKE--- 180
           KSSSMKVERVS+VEQFDRNG TSS K+SRSES +S  + VK EKTDSVVKVERIVKE   
Sbjct: 121 KSSSMKVERVSQVEQFDRNGVTSSAKFSRSESDISGKNPVKVEKTDSVVKVERIVKEEKR 180

Query: 181 ---EKKPSSGAAAPPKLTSMVKSKDAARDKIRELLFEAFSKVPGEADEDVMDEVNASDPI 240
              EKKPSSG  APPKLTSM+KSKDAARDKIRELLFEAFSKVP EADEDVMDEVNASDPI
Sbjct: 181 ISIEKKPSSGPDAPPKLTSMIKSKDAARDKIRELLFEAFSKVPSEADEDVMDEVNASDPI 240

Query: 241 RVAISVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMTTA 300
           RVA+SVESVMFENWGGSTG+QK KYRSIMFNLKDPKNPDFRRKVLLGLIKPER+INM+TA
Sbjct: 241 RVAVSVESVMFENWGGSTGSQKTKYRSIMFNLKDPKNPDFRRKVLLGLIKPERLINMSTA 300

Query: 301 DMASDQRKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMT 360
           DMASDQRKRENEEI QKALFDCER GAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMT
Sbjct: 301 DMASDQRKRENEEIEQKALFDCERAGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMT 360

Query: 361 TFVTCVNCNNHWKFC 370
           TFVTCVNCNNHWKFC
Sbjct: 361 TFVTCVNCNNHWKFC 375

[Close]

BLAST of MELO3C020014 vs. TAIR 10
Match: AT2G38560.1 (transcript elongation factor IIS )

HSP 1 Score: 386.7 bits (992), Expect = 2.0e-107
Identity = 213/380 (56.05%), Postives = 267/380 (70.26%), Query Frame = 0


Query: 1   MENELVELFEAAKKAADAAAAPS-NDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRL 60
           ME++L++LFE AKKAADAAA       G E S+C+DAL+QLKKFPVTY  LV+TQVGK+L
Sbjct: 1   MESDLIDLFEGAKKAADAAALDGVTSSGPEVSQCIDALKQLKKFPVTYDTLVATQVGKKL 60

Query: 61  RHLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSVES------ 120
           R L KHP + I+  A+DL+E+WK++VI+ET K KK    +     K+    VE       
Sbjct: 61  RSLAKHPVEDIKSVATDLLEIWKKVVIEETAKAKKTEGTNGCKEAKVNKMDVEKPSNPAP 120

Query: 121 VKVEKFQKSSSMKVERVSKVEQFDRNGATSSVKYSRSESAVSDSSSVKFEKTDSVVKVER 180
           VKV+K Q+  S K  +V + E    N   + VK  R    +  ++  K +     VK E+
Sbjct: 121 VKVQKLQRGDSAKSIKVERKE--PDNKVVTGVKIERKVPDIKVTNGTKIDYRGQAVKDEK 180

Query: 181 IVKEE----KKPSSGAAAPPKLTSMVKSKDAARDKIRELLFEAFSKVPGEADEDVMDEVN 240
           + K+     K P+  A APPKLT+M+K  D  RDKIRELL EA  +V GEAD+   + VN
Sbjct: 181 VSKDNQSSMKAPAKAANAPPKLTAMLKCNDPVRDKIRELLVEALCRVAGEADDYERESVN 240

Query: 241 ASDPIRVAISVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMI 300
           ASDP+RVA+SVES+MFE  G STGAQK KYRSIMFNL+D  NPD RR+VL G I PE++I
Sbjct: 241 ASDPLRVAVSVESLMFEKLGRSTGAQKLKYRSIMFNLRDSNNPDLRRRVLTGEISPEKLI 300

Query: 301 NMTTADMASDQRKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSA 360
            ++  DMASD+RK+EN +I +KALFDCERG A KA+TDQFKCGRCGQRK TYYQ+QTRSA
Sbjct: 301 TLSAEDMASDKRKQENNQIKEKALFDCERGLAAKASTDQFKCGRCGQRKCTYYQMQTRSA 360

Query: 361 DEPMTTFVTCVNCNNHWKFC 370
           DEPMTT+VTCVNC+NHWKFC
Sbjct: 361 DEPMTTYVTCVNCDNHWKFC 378

[Close]

BLAST of MELO3C020014 vs. TAIR 10
Match: AT2G42730.1 (F-box family protein )

HSP 1 Score: 104.0 bits (258), Expect = 2.7e-22
Identity = 58/127 (45.67%), Postives = 80/127 (62.99%), Query Frame = 0


Query: 189 PKLTSMVKSKDAARDKIRELLFEAFSKVPGE-ADEDVMDEVNASDPIRVAISVESVMFEN 248
           P  ++M K+ D+ RDK+RE+L  +  KV  E  D ++   V A DP  VA+SVES MFE 
Sbjct: 594 PTHSTMKKTGDSKRDKVREILQTSLVKVASEIVDTEMKTRVTACDPSVVAVSVESAMFEK 653

Query: 249 WGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMTTADMASDQRKRENEE 308
            G   G  KAKYRSI+FN+ D  NPD RRKVL+G I  ER++ M   +M S++ ++E + 
Sbjct: 654 LGCFMGPHKAKYRSILFNMGDSNNPDLRRKVLIGEINGERLVTMERQEMGSEKIQKEVQR 713

Query: 309 IAQKALF 315
           I + A F
Sbjct: 714 IKENARF 720

[Close]

BLAST of MELO3C020014 vs. TAIR 10
Match: AT4G18720.1 (Transcription factor IIS protein )

HSP 1 Score: 99.8 bits (247), Expect = 5.0e-21
Identity = 59/125 (47.20%), Postives = 79/125 (63.20%), Query Frame = 0


Query: 176 KEEKKPSSGAAAP-PKLTSMVKSKDAARDKIRELLFEAFSKVPGE-ADEDVMDEVNASDP 235
           +E+ + +  AA   P   +M K+ D+ RDK+RE+L  + +KV  E  D ++   V A DP
Sbjct: 91  REKSRDNREAAVKIPTHATMKKTGDSKRDKVREILQTSLAKVASEVVDTEMKTRVTACDP 150

Query: 236 IRVAISVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMTT 295
             VA+SVE+ MFEN G   G QKAKYRSI+FN+ D  NPD RRKVLLG I  ER++ M  
Sbjct: 151 WVVAVSVETAMFENLGCFMGPQKAKYRSILFNMGDSNNPDLRRKVLLGEISGERLVKMEK 210

Query: 296 ADMAS 299
            +M S
Sbjct: 211 EEMGS 215

[Close]

BLAST of MELO3C020014 vs. TAIR 10
Match: AT5G42325.1 (Transcription factor IIS protein )

HSP 1 Score: 69.3 bits (168), Expect = 7.2e-12
Identity = 47/141 (33.33%), Postives = 74/141 (52.48%), Query Frame = 0


Query: 176 KEEKKPSSGAAAPPKLTSMVKSKDAARDKIRELLFEAFSKVPGEADEDVMDE--VNASDP 235
           +E+ +        P  ++M K+ D+ RDK+ E+L  + +KV  E  +  M    +   DP
Sbjct: 91  REKSRDRETPVKIPTHSTMKKTGDSKRDKVHEILQSSLAKVATEVVDTEMKRRVMTVCDP 150

Query: 236 IRVAISVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMTT 295
             VA+SVES M                SI+FN+ D  NPD RRKVL+G I  ER++ M  
Sbjct: 151 WVVAVSVESAM----------------SILFNMGDSNNPDLRRKVLIGEISGERLVKMEK 210

Query: 296 ADMASDQRKRENEEIAQKALF 315
            +M S++ ++E + I ++A F
Sbjct: 211 DEMGSEKIQKEVQRIKERARF 215

[Close]

BLAST of MELO3C020014 vs. TAIR 10
Match: AT5G25520.1 (SPOC domain / Transcription elongation factor S-II protein )

HSP 1 Score: 63.9 bits (154), Expect = 3.0e-10
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 0


Query: 232 DPIRVAISVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINM 291
           DP  +A  +E  +F+ +GG     K K RS++FNLKD  NP+ R  V+ G I PER+ NM
Sbjct: 359 DPELLASKIELELFKLFGGVNKKYKEKGRSLLFNLKDKNNPELRESVMSGKISPERLCNM 418

Query: 292 TTADMASDQ----RKRENEEIAQ 311
           T  ++AS +    R+ + EE+A+
Sbjct: 419 TAEELASKELSQWRQAKAEEMAE 441

The following BLAST results are available for this feature:

BLAST of MELO3C020014 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456781.1	2.1e-199	100.00	PREDICTED: transcription elongation factor TFIIS [Cucumis melo] >KAA0051978.1 tr...	[more]
XP_004138392.1	1.0e-193	96.21	transcription elongation factor TFIIS [Cucumis sativus] >KGN45841.1 hypothetical...	[more]
XP_038884917.1	3.2e-187	92.53	transcription elongation factor TFIIS [Benincasa hispida]	[more]
XP_023531955.1	1.1e-182	90.91	transcription elongation factor TFIIS-like [Cucurbita pepo subsp. pepo]	[more]
KAG6578486.1	1.8e-182	90.40	Transcription elongation factor TFIIS, partial [Cucurbita argyrosperma subsp. so...	[more]

BLAST of MELO3C020014 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVH8	2.9e-106	56.05	Transcription elongation factor TFIIS OS=Arabidopsis thaliana OX=3702 GN=TFIIS P...	[more]
P20232	1.7e-29	30.77	Transcription elongation factor S-II OS=Drosophila melanogaster OX=7227 GN=TfIIS...	[more]
Q2KI09	2.9e-29	29.97	Transcription elongation factor A protein 3 OS=Bos taurus OX=9913 GN=TCEA3 PE=2 ...	[more]
Q4KLL0	2.0e-27	28.11	Transcription elongation factor A protein 1 OS=Rattus norvegicus OX=10116 GN=Tce...	[more]
P23881	2.0e-27	30.08	Transcription elongation factor A protein 3 OS=Mus musculus OX=10090 GN=Tcea3 PE...	[more]

BLAST of MELO3C020014 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U9K1	1.0e-199	100.00	Transcription elongation factor TFIIS OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3C448	1.0e-199	100.00	transcription elongation factor TFIIS OS=Cucumis melo OX=3656 GN=LOC103496629 PE...	[more]
A0A0A0KDH9	5.0e-194	96.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014610 PE=4 SV=1	[more]
A0A6J1BWY6	2.2e-181	89.39	transcription elongation factor TFIIS OS=Momordica charantia OX=3673 GN=LOC11100...	[more]
A0A6J1FF11	2.2e-181	89.60	transcription elongation factor TFIIS-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of MELO3C020014 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38560.1	2.0e-107	56.05	transcript elongation factor IIS	[more]
AT2G42730.1	2.7e-22	45.67	F-box family protein	[more]
AT4G18720.1	5.0e-21	47.20	Transcription factor IIS protein	[more]
AT5G42325.1	7.2e-12	33.33	Transcription factor IIS protein	[more]
AT5G25520.1	3.0e-10	40.96	SPOC domain / Transcription elongation factor S-II protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003618	Transcription elongation factor S-II, central domain	SMART	SM00510	mid_6	coord: 199..307 e-value: 6.8E-36 score: 135.3
IPR003618	Transcription elongation factor S-II, central domain	PFAM	PF07500	TFIIS_M	coord: 199..315 e-value: 1.6E-31 score: 109.1
IPR003618	Transcription elongation factor S-II, central domain	PROSITE	PS51321	TFIIS_CENTRAL	coord: 201..324 score: 33.663143
IPR003617	Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type	SMART	SM00509	TFS2_5	coord: 8..87 e-value: 2.2E-24 score: 97.0
IPR001222	Zinc finger, TFIIS-type	SMART	SM00440	Cys4_2	coord: 329..368 e-value: 9.7E-24 score: 94.9
IPR001222	Zinc finger, TFIIS-type	PFAM	PF01096	TFIIS_C	coord: 329..367 e-value: 1.1E-19 score: 70.0
IPR001222	Zinc finger, TFIIS-type	PROSITE	PS00466	ZF_TFIIS_1	coord: 331..366
IPR001222	Zinc finger, TFIIS-type	PROSITE	PS51133	ZF_TFIIS_2	coord: 327..367 score: 14.636859
IPR035441	TFIIS/LEDGF domain superfamily	GENE3D	1.20.930.10	Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	coord: 1..101 e-value: 4.4E-23 score: 82.8
IPR035441	TFIIS/LEDGF domain superfamily	SUPERFAMILY	47676	Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	coord: 27..100
IPR017923	Transcription factor IIS, N-terminal	PFAM	PF08711	Med26	coord: 36..85 e-value: 3.9E-11 score: 42.8
IPR017923	Transcription factor IIS, N-terminal	PROSITE	PS51319	TFIIS_N	coord: 10..88 score: 20.267712
IPR036575	Transcription elongation factor S-II, central domain superfamily	GENE3D	1.10.472.30		coord: 173..297 e-value: 8.6E-27 score: 95.6
IPR036575	Transcription elongation factor S-II, central domain superfamily	SUPERFAMILY	46942	Elongation factor TFIIS domain 2	coord: 188..299
IPR035100	Transcription elongation factor, IIS-type	PIRSF	PIRSF006704	TFIIS	coord: 2..369 e-value: 2.8E-99 score: 330.5
None	No IPR available	GENE3D	2.20.25.10		coord: 298..369 e-value: 1.4E-27 score: 97.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..107
None	No IPR available	PANTHER	PTHR11477:SF36	TRANSCRIPTION ELONGATION FACTOR TFIIS	coord: 1..369
None	No IPR available	PANTHER	PTHR11477	TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN	coord: 1..369
None	No IPR available	CDD	cd13749	Zn-ribbon_TFIIS	coord: 322..368 e-value: 7.99119E-30 score: 106.921
None	No IPR available	CDD	cd00183	TFIIS_I	coord: 24..85 e-value: 1.0113E-16 score: 72.341
None	No IPR available	SUPERFAMILY	57783	Zinc beta-ribbon	coord: 310..367
IPR006289	Transcription elongation factor, TFIIS	TIGRFAM	TIGR01385	TIGR01385	coord: 12..369 e-value: 1.7E-99 score: 331.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C020014.1	MELO3C020014.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding