MELO3C019998.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C019998.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionTPRXL protein
Locationchr03: 20014304 .. 20015415 (+)
RNA-Seq ExpressionMELO3C019998.jh1
SyntenyMELO3C019998.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTTGTCCTAGCCTACTTCATATACCACCCAATTCTTTTTCCCTCCATTTGTCATTATTATATATCAATCAAATTCAGCTGCTTTGGATCTTGAAATCCAATTCTTAGATCCCTGGAAACACAGAAACAGAAGAGATCTCATTTTCATATATCGTTTTTGGGCTTCAAGATGCAAACTCAAAACTACGACCAAATCTCTCAAAAATCTTCCCAAATTACCAAACATGAAGATAGATTCTTCACTCGAGCCCTATCCAAGGAGCTCAATTCCACCACCAACTCCTCTTTTCGAGTCTATTACGGCGGCGCCACTGGTGCTATTCCCTTCCGGTGGGAGTCCCGACCGGGAACCCCAAAGCATACTTTTTCAGACACTTCAATCCCTCCTCTTACTCCTCCTCCGTCTTACTTTTCCTCTTCACATTCTACTTCCAAAGCCTCTTCCAAACCAACCCTTTTGAGCTCGATTTTTCCTCGCCTTACACCAAGGAAATCTCGAACTTTCCCATCTTTCTCCTCCTCTTCTGGCTCCTCTTCCTCATCCTCTTCATTAGCTTCATGGTCATCCTCTTTCTCATCGTCCTCCTCATCTCCCTCTCCTTTCGTTAGACCTAAATTCTTCAAACGTCGTCGTCACTTCTCGGATATTCCAAGCTTACCGTTTGAGTATACTTTTGACGATAAAGACGGAGACGAGGTGGTGGCCGGGAGTACTGCTCCGAATTCTCCTACTTCAATTTTGTGCTTTGGTGGTGGTTCTTCAGGCAGAGCTTCATTGTTTGGAGGTTGTTATCAGTTAGTGAGTGTGAAGAAAGCTTTGTTGTCCATTGTTGGCCATGGATCTGCAAGTAGAGGTACTCTTAATGATTAGTTGTGTGAATGAAATTAGTTAATTCTCACAAGTTTTTCTTTTTCTTTTCCTTTTTTTGGGTTCAATCTTCTCTCATTGTGCATTTGTGTTTGTGGAGTGAAATGTTATATTATATGGAACAGAAGTTCTTGAATTGATGTTTTTTGGGCTATTAGGCTCAAATTAAACATTAAATTTCTTGAATGTGACATATCTCATGTCAAATTATAACAAAAAATCAAAACATTTTTAGTTTTTGTTT

mRNA sequence

GCTTGTCCTAGCCTACTTCATATACCACCCAATTCTTTTTCCCTCCATTTGTCATTATTATATATCAATCAAATTCAGCTGCTTTGGATCTTGAAATCCAATTCTTAGATCCCTGGAAACACAGAAACAGAAGAGATCTCATTTTCATATATCGTTTTTGGGCTTCAAGATGCAAACTCAAAACTACGACCAAATCTCTCAAAAATCTTCCCAAATTACCAAACATGAAGATAGATTCTTCACTCGAGCCCTATCCAAGGAGCTCAATTCCACCACCAACTCCTCTTTTCGAGTCTATTACGGCGGCGCCACTGGTGCTATTCCCTTCCGGTGGGAGTCCCGACCGGGAACCCCAAAGCATACTTTTTCAGACACTTCAATCCCTCCTCTTACTCCTCCTCCGTCTTACTTTTCCTCTTCACATTCTACTTCCAAAGCCTCTTCCAAACCAACCCTTTTGAGCTCGATTTTTCCTCGCCTTACACCAAGGAAATCTCGAACTTTCCCATCTTTCTCCTCCTCTTCTGGCTCCTCTTCCTCATCCTCTTCATTAGCTTCATGGTCATCCTCTTTCTCATCGTCCTCCTCATCTCCCTCTCCTTTCGTTAGACCTAAATTCTTCAAACGTCGTCGTCACTTCTCGGATATTCCAAGCTTACCGTTTGAGTATACTTTTGACGATAAAGACGGAGACGAGGTGGTGGCCGGGAGTACTGCTCCGAATTCTCCTACTTCAATTTTGTGCTTTGGTGGTGGTTCTTCAGGCAGAGCTTCATTGTTTGGAGGTTGTTATCAGTTAGTGAGTGTGAAGAAAGCTTTGTTGTCCATTGTTGGCCATGGATCTGCAAGTAGAGGTACTCTTAATGATTAGTTGTGTGAATGAAATTAGTTAATTCTCACAAGTTTTTCTTTTTCTTTTCCTTTTTTTGGGTTCAATCTTCTCTCATTGTGCATTTGTGTTTGTGGAGTGAAATGTTATATTATATGGAACAGAAGTTCTTGAATTGATGTTTTTTGGGCTATTAGGCTCAAATTAAACATTAAATTTCTTGAATGTGACATATCTCATGTCAAATTATAACAAAAAATCAAAACATTTTTAGTTTTTGTTT

Coding sequence (CDS)

ATGCAAACTCAAAACTACGACCAAATCTCTCAAAAATCTTCCCAAATTACCAAACATGAAGATAGATTCTTCACTCGAGCCCTATCCAAGGAGCTCAATTCCACCACCAACTCCTCTTTTCGAGTCTATTACGGCGGCGCCACTGGTGCTATTCCCTTCCGGTGGGAGTCCCGACCGGGAACCCCAAAGCATACTTTTTCAGACACTTCAATCCCTCCTCTTACTCCTCCTCCGTCTTACTTTTCCTCTTCACATTCTACTTCCAAAGCCTCTTCCAAACCAACCCTTTTGAGCTCGATTTTTCCTCGCCTTACACCAAGGAAATCTCGAACTTTCCCATCTTTCTCCTCCTCTTCTGGCTCCTCTTCCTCATCCTCTTCATTAGCTTCATGGTCATCCTCTTTCTCATCGTCCTCCTCATCTCCCTCTCCTTTCGTTAGACCTAAATTCTTCAAACGTCGTCGTCACTTCTCGGATATTCCAAGCTTACCGTTTGAGTATACTTTTGACGATAAAGACGGAGACGAGGTGGTGGCCGGGAGTACTGCTCCGAATTCTCCTACTTCAATTTTGTGCTTTGGTGGTGGTTCTTCAGGCAGAGCTTCATTGTTTGGAGGTTGTTATCAGTTAGTGAGTGTGAAGAAAGCTTTGTTGTCCATTGTTGGCCATGGATCTGCAAGTAGAGGTACTCTTAATGATTAG

Protein sequence

MQTQNYDQISQKSSQITKHEDRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPGTPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTFPSFSSSSGSSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRHFSDIPSLPFEYTFDDKDGDEVVAGSTAPNSPTSILCFGGGSSGRASLFGGCYQLVSVKKALLSIVGHGSASRGTLND
Homology
BLAST of MELO3C019998.jh1 vs. NCBI nr
Match: XP_016901982.1 (PREDICTED: putative uncharacterized protein DDB_G0277255 [Cucumis melo] >KAA0052017.1 putative serine-rich protein [Cucumis melo var. makuwa])

HSP 1 Score: 437 bits (1123), Expect = 5.32e-154
Identity = 231/233 (99.14%), Postives = 232/233 (99.57%), Query Frame = 0

Query: 1   MQTQNYDQISQKSSQITKHEDRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 60
           MQTQNYDQISQKSSQITKHEDRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG
Sbjct: 1   MQTQNYDQISQKSSQITKHEDRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 60

Query: 61  TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTFPSFSSSSG 120
           TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTFPSFSSSSG
Sbjct: 61  TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTFPSFSSSSG 120

Query: 121 SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRHFSDIPSLPFEYTFDDKDGDEVVAG 180
           SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRHFSDIPSLPFEY+FDDKDGDEVVAG
Sbjct: 121 SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRHFSDIPSLPFEYSFDDKDGDEVVAG 180

Query: 181 STAPNSPTSILCFGGGSSGRASLFGGCYQLVSVKKALLSIVGHGSASRGTLND 233
           STAPNSPTSILCFGGGSS RASLFGGCYQLVSVKKALLSIVGHGSASRGTLND
Sbjct: 181 STAPNSPTSILCFGGGSSSRASLFGGCYQLVSVKKALLSIVGHGSASRGTLND 233

BLAST of MELO3C019998.jh1 vs. NCBI nr
Match: XP_011656432.1 (putative protein TPRXL [Cucumis sativus])

HSP 1 Score: 413 bits (1061), Expect = 1.45e-144
Identity = 222/233 (95.28%), Postives = 226/233 (97.00%), Query Frame = 0

Query: 1   MQTQNYDQISQKSSQITKHEDRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 60
           M+TQ+YDQISQKS  ITKHED+FFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG
Sbjct: 1   MKTQSYDQISQKSFPITKHEDKFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 60

Query: 61  TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTFPSFSSSSG 120
           TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRT PSFSSSSG
Sbjct: 61  TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTSPSFSSSSG 120

Query: 121 SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRHFSDIPSLPFEYTFDDKDGDEVVAG 180
           SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRR FSDIPSLPFEY+FDDKDGDEVVAG
Sbjct: 121 SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRRFSDIPSLPFEYSFDDKDGDEVVAG 180

Query: 181 STAPNSPTSILCFGGGSSGRASLFGGCYQLVSVKKALLSIVGHGSASRGTLND 233
           S APNSPTSILCFGGGSS RASLFGGCYQLVSVK ALLSIVGHGSASRGTLND
Sbjct: 181 S-APNSPTSILCFGGGSSSRASLFGGCYQLVSVKNALLSIVGHGSASRGTLND 232

BLAST of MELO3C019998.jh1 vs. NCBI nr
Match: KAE8646577.1 (hypothetical protein Csa_005771 [Cucumis sativus])

HSP 1 Score: 404 bits (1039), Expect = 4.34e-141
Identity = 218/229 (95.20%), Postives = 222/229 (96.94%), Query Frame = 0

Query: 1   MQTQNYDQISQKSSQITKHEDRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 60
           M+TQ+YDQISQKS  ITKHED+FFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG
Sbjct: 1   MKTQSYDQISQKSFPITKHEDKFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 60

Query: 61  TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTFPSFSSSSG 120
           TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRT PSFSSSSG
Sbjct: 61  TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTSPSFSSSSG 120

Query: 121 SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRHFSDIPSLPFEYTFDDKDGDEVVAG 180
           SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRR FSDIPSLPFEY+FDDKDGDEVVAG
Sbjct: 121 SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRRFSDIPSLPFEYSFDDKDGDEVVAG 180

Query: 181 STAPNSPTSILCFGGGSSGRASLFGGCYQLVSVKKALLSIVGHGSASRG 229
           S APNSPTSILCFGGGSS RASLFGGCYQLVSVK ALLSIVGHGSASRG
Sbjct: 181 S-APNSPTSILCFGGGSSSRASLFGGCYQLVSVKNALLSIVGHGSASRG 228

BLAST of MELO3C019998.jh1 vs. NCBI nr
Match: XP_038885974.1 (putative protein TPRXL [Benincasa hispida])

HSP 1 Score: 374 bits (961), Expect = 2.41e-129
Identity = 208/233 (89.27%), Postives = 213/233 (91.42%), Query Frame = 0

Query: 1   MQTQNYDQISQKSSQITKHEDRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 60
           MQTQNYDQISQKS Q TKHEDRFF RALSK+LNSTTNSSFRVYYGGATGAIPFRWESRPG
Sbjct: 1   MQTQNYDQISQKSFQSTKHEDRFFNRALSKDLNSTTNSSFRVYYGGATGAIPFRWESRPG 60

Query: 61  TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTFPSFSSSSG 120
           TPKH FSDTSIPPLTPPPSY+SSSHSTSKASSKPTLLSSIFPRLTPRKSRT  SFSSSSG
Sbjct: 61  TPKHPFSDTSIPPLTPPPSYYSSSHSTSKASSKPTLLSSIFPRLTPRKSRTSSSFSSSSG 120

Query: 121 SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRHFSDIPSLPFEYTFDDKDGDEVVAG 180
           SSSSSSS ASWSSS SSSSSSPS FVRPKFFKRRR FS+  SLPFEY+FDD D DEVV G
Sbjct: 121 SSSSSSS-ASWSSSRSSSSSSPSAFVRPKFFKRRRRFSESSSLPFEYSFDDNDRDEVVTG 180

Query: 181 STAPNSPTSILCFGGGSSGRASLFGGCYQLVSVKKALLSIVGHGSASRGTLND 233
           ST PNSPTS LCFGG SS RASLFGGCYQLVSVK ALLSIVGHGSASRGTLN+
Sbjct: 181 ST-PNSPTSTLCFGGCSSSRASLFGGCYQLVSVKNALLSIVGHGSASRGTLNN 231

BLAST of MELO3C019998.jh1 vs. NCBI nr
Match: XP_022134140.1 (putative protein TPRXL [Momordica charantia])

HSP 1 Score: 289 bits (740), Expect = 7.91e-96
Identity = 171/235 (72.77%), Postives = 186/235 (79.15%), Query Frame = 0

Query: 1   MQTQNYDQISQKSSQITKHEDRFFTR---ALSKELNSTTNSSFRVYYGGATGAIPFRWES 60
           MQ+ NYDQISQK  QI    DRFFTR    LSKE NS  NSSFRVYYGGA+GAIPFRWES
Sbjct: 1   MQSANYDQISQKPLQIKHQNDRFFTRPAPVLSKEANSAANSSFRVYYGGASGAIPFRWES 60

Query: 61  RPGTPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTFPSFSS 120
           RPGTPKH++S+TSIPPLTPPPSY++SSHS SKASSKPTLLSSIFPRL PR+SR  PS   
Sbjct: 61  RPGTPKHSYSETSIPPLTPPPSYYTSSHSNSKASSKPTLLSSIFPRLAPRRSRNSPS--- 120

Query: 121 SSGSSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRHFSDIPSLPFEYTFDDKDGDEV 180
           S  S+S SSS +SWSSS SSSSSSP    +  FFKRRR  SD PSLPFEY+FDD DGDE 
Sbjct: 121 SFSSASLSSSFSSWSSSRSSSSSSP----KLNFFKRRRSISDTPSLPFEYSFDDGDGDE- 180

Query: 181 VAGSTAPNSPTSILCFGGGSSGRASLFGGCYQLVSVKKALLSIVGHGSASRGTLN 232
             GS+  NSPTS LCFGG SS RAS F GCYQLVSVK A LS+VGHGSA RGT+N
Sbjct: 181 -PGSS--NSPTSTLCFGGASSSRAS-FRGCYQLVSVKNAFLSMVGHGSAGRGTVN 223

BLAST of MELO3C019998.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UC51 (Putative serine-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G005080 PE=4 SV=1)

HSP 1 Score: 437 bits (1123), Expect = 2.57e-154
Identity = 231/233 (99.14%), Postives = 232/233 (99.57%), Query Frame = 0

Query: 1   MQTQNYDQISQKSSQITKHEDRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 60
           MQTQNYDQISQKSSQITKHEDRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG
Sbjct: 1   MQTQNYDQISQKSSQITKHEDRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 60

Query: 61  TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTFPSFSSSSG 120
           TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTFPSFSSSSG
Sbjct: 61  TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTFPSFSSSSG 120

Query: 121 SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRHFSDIPSLPFEYTFDDKDGDEVVAG 180
           SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRHFSDIPSLPFEY+FDDKDGDEVVAG
Sbjct: 121 SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRHFSDIPSLPFEYSFDDKDGDEVVAG 180

Query: 181 STAPNSPTSILCFGGGSSGRASLFGGCYQLVSVKKALLSIVGHGSASRGTLND 233
           STAPNSPTSILCFGGGSS RASLFGGCYQLVSVKKALLSIVGHGSASRGTLND
Sbjct: 181 STAPNSPTSILCFGGGSSSRASLFGGCYQLVSVKKALLSIVGHGSASRGTLND 233

BLAST of MELO3C019998.jh1 vs. ExPASy TrEMBL
Match: A0A1S4E178 (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103496610 PE=4 SV=1)

HSP 1 Score: 437 bits (1123), Expect = 2.57e-154
Identity = 231/233 (99.14%), Postives = 232/233 (99.57%), Query Frame = 0

Query: 1   MQTQNYDQISQKSSQITKHEDRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 60
           MQTQNYDQISQKSSQITKHEDRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG
Sbjct: 1   MQTQNYDQISQKSSQITKHEDRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 60

Query: 61  TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTFPSFSSSSG 120
           TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTFPSFSSSSG
Sbjct: 61  TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTFPSFSSSSG 120

Query: 121 SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRHFSDIPSLPFEYTFDDKDGDEVVAG 180
           SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRHFSDIPSLPFEY+FDDKDGDEVVAG
Sbjct: 121 SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRHFSDIPSLPFEYSFDDKDGDEVVAG 180

Query: 181 STAPNSPTSILCFGGGSSGRASLFGGCYQLVSVKKALLSIVGHGSASRGTLND 233
           STAPNSPTSILCFGGGSS RASLFGGCYQLVSVKKALLSIVGHGSASRGTLND
Sbjct: 181 STAPNSPTSILCFGGGSSSRASLFGGCYQLVSVKKALLSIVGHGSASRGTLND 233

BLAST of MELO3C019998.jh1 vs. ExPASy TrEMBL
Match: A0A0A0K7T8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014460 PE=4 SV=1)

HSP 1 Score: 413 bits (1061), Expect = 7.00e-145
Identity = 222/233 (95.28%), Postives = 226/233 (97.00%), Query Frame = 0

Query: 1   MQTQNYDQISQKSSQITKHEDRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 60
           M+TQ+YDQISQKS  ITKHED+FFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG
Sbjct: 1   MKTQSYDQISQKSFPITKHEDKFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 60

Query: 61  TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTFPSFSSSSG 120
           TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRT PSFSSSSG
Sbjct: 61  TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTSPSFSSSSG 120

Query: 121 SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRHFSDIPSLPFEYTFDDKDGDEVVAG 180
           SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRR FSDIPSLPFEY+FDDKDGDEVVAG
Sbjct: 121 SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRRFSDIPSLPFEYSFDDKDGDEVVAG 180

Query: 181 STAPNSPTSILCFGGGSSGRASLFGGCYQLVSVKKALLSIVGHGSASRGTLND 233
           S APNSPTSILCFGGGSS RASLFGGCYQLVSVK ALLSIVGHGSASRGTLND
Sbjct: 181 S-APNSPTSILCFGGGSSSRASLFGGCYQLVSVKNALLSIVGHGSASRGTLND 232

BLAST of MELO3C019998.jh1 vs. ExPASy TrEMBL
Match: A0A6J1BX95 (Uncharacterized protein OS=Momordica charantia OX=3673 GN=LOC111006479 PE=4 SV=1)

HSP 1 Score: 289 bits (740), Expect = 3.83e-96
Identity = 171/235 (72.77%), Postives = 186/235 (79.15%), Query Frame = 0

Query: 1   MQTQNYDQISQKSSQITKHEDRFFTR---ALSKELNSTTNSSFRVYYGGATGAIPFRWES 60
           MQ+ NYDQISQK  QI    DRFFTR    LSKE NS  NSSFRVYYGGA+GAIPFRWES
Sbjct: 1   MQSANYDQISQKPLQIKHQNDRFFTRPAPVLSKEANSAANSSFRVYYGGASGAIPFRWES 60

Query: 61  RPGTPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTFPSFSS 120
           RPGTPKH++S+TSIPPLTPPPSY++SSHS SKASSKPTLLSSIFPRL PR+SR  PS   
Sbjct: 61  RPGTPKHSYSETSIPPLTPPPSYYTSSHSNSKASSKPTLLSSIFPRLAPRRSRNSPS--- 120

Query: 121 SSGSSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRHFSDIPSLPFEYTFDDKDGDEV 180
           S  S+S SSS +SWSSS SSSSSSP    +  FFKRRR  SD PSLPFEY+FDD DGDE 
Sbjct: 121 SFSSASLSSSFSSWSSSRSSSSSSP----KLNFFKRRRSISDTPSLPFEYSFDDGDGDE- 180

Query: 181 VAGSTAPNSPTSILCFGGGSSGRASLFGGCYQLVSVKKALLSIVGHGSASRGTLN 232
             GS+  NSPTS LCFGG SS RAS F GCYQLVSVK A LS+VGHGSA RGT+N
Sbjct: 181 -PGSS--NSPTSTLCFGGASSSRAS-FRGCYQLVSVKNAFLSMVGHGSAGRGTVN 223

BLAST of MELO3C019998.jh1 vs. ExPASy TrEMBL
Match: A0A6J1K022 (uncharacterized serine-rich protein C215.13-like OS=Cucurbita maxima OX=3661 GN=LOC111489820 PE=4 SV=1)

HSP 1 Score: 267 bits (682), Expect = 1.23e-87
Identity = 155/202 (76.73%), Postives = 163/202 (80.69%), Query Frame = 0

Query: 30  KELNSTTNSSFRVYYGGATGAIPFRWESRPGTPKHTFSDTSIPPLTPPPSYFSSSHSTSK 89
           KE NS  NSSFRVYYGGATGAIPFRWESRPGTPKHT+SDTSIPPLTPPPSY+SSSHSTSK
Sbjct: 12  KEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPPSYYSSSHSTSK 71

Query: 90  ASSKPTLLSSIFPRLTPRKSRTFPSFSSSSGSSSSSSSLASWSSSFSSSSSSPSPFVRPK 149
            S KPT  +SIF     RKSRT  SFS SS SSSSSSS  SWSSS     SSPS FVRPK
Sbjct: 72  PSPKPTRFTSIF-----RKSRTASSFSFSSSSSSSSSSFTSWSSSR----SSPSAFVRPK 131

Query: 150 FFKRRRHFSDIPSLPFEYTFDDKDGDEVVAGSTAPNSPTSILCFGGGSSGR-ASLFGGCY 209
           FFK RR FS+ PSLPFE +FDD +GDE V    +P+SPTS LCFGGGSS R ASLF GCY
Sbjct: 132 FFKHRRCFSNSPSLPFECSFDDNEGDEAVG---SPDSPTSTLCFGGGSSSRRASLFRGCY 191

Query: 210 QLVSVKKALLSIVGHGSASRGT 230
           QLVSVK ALLSIVGHGSASRGT
Sbjct: 192 QLVSVKNALLSIVGHGSASRGT 201

BLAST of MELO3C019998.jh1 vs. TAIR 10
Match: AT2G40475.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56260.2); Has 477 Blast hits to 219 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 91; Fungi - 61; Plants - 144; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). )

HSP 1 Score: 85.1 bits (209), Expect = 8.1e-17
Identity = 82/207 (39.61%), Postives = 117/207 (56.52%), Query Frame = 0

Query: 25  TRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPGTPKHT-FSDT-SIPPLTPPPSYFS 84
           ++ + KE +   +SS   YYGGA  ++PF WE+RPGTPKH  FS++  +PPLTPPPSY+S
Sbjct: 15  SKIIVKESSQVNSSSRIYYYGGA--SVPFLWETRPGTPKHALFSESLRLPPLTPPPSYYS 74

Query: 85  SSHST-SKASSKPTLLSSIFPRLTPRKSRTFPSFSSSSGSSSSSSSLASWSSSFSSSSSS 144
           SS S+ +K S   T+  + F +    +  + PSFS SS SSSSSSS         SSSS 
Sbjct: 75  SSSSSGNKLSKARTIKQTRFVKTLLSRHVSRPSFSWSSASSSSSSSY--------SSSSP 134

Query: 145 PSPFVRPKFFKRRRHFSDIPSLPFEYTFDDKDGDEVVAGSTAPNSPTSILCFGGGSSGRA 204
           PS        + R+ +S   S    Y  +D D +E+V+     +SPTS LC+  G S   
Sbjct: 135 PSKVEH----RPRKCYSCSRS----YVKED-DEEEIVS-----SSPTSTLCYKRGFSS-- 188

Query: 205 SLFGGCYQLVSVKKALLSIVGHGSASR 229
                   + S+K+AL S++ HGS+ +
Sbjct: 195 -------SMGSMKRALCSVLSHGSSRK 188

BLAST of MELO3C019998.jh1 vs. TAIR 10
Match: AT3G56260.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40475.1). )

HSP 1 Score: 68.6 bits (166), Expect = 7.8e-12
Identity = 80/184 (43.48%), Postives = 96/184 (52.17%), Query Frame = 0

Query: 43  YYGGATGAIPFRWESRPGTPK-HTFSDTSIP-PLTPPPSYFSSSHSTSKASSKPTLLSSI 102
           YYGGA  +IPF WESRPGTPK H  SD+S+P PLTPPPSY+SS        S P   S +
Sbjct: 18  YYGGA--SIPFIWESRPGTPKNHLCSDSSLPLPLTPPPSYYSSG-----ILSTPRTQSKV 77

Query: 103 FPRLTPRKSRTFPSFS----SSSGSSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRH 162
             +L+  K  +F  FS    S+ GS  ++SS  SWSS+ SSSS S SP    K  KR  H
Sbjct: 78  RSKLS--KFLSFSMFSDLRRSNHGSKKTASSSFSWSSTSSSSSFSSSPPHSLK--KRMSH 137

Query: 163 FSDIPSLPFEYTFDDKDGDEVVAGSTAPNSPTSIL-CFGGGSSGRASLFGGCYQLVSVKK 220
               P L   Y  D+             +SPTS L C  GG  G +S  G      SV +
Sbjct: 138 DKKSPLLYANYEEDE-----------LRSSPTSTLCCSNGGRLGCSSSMG------SVTR 173

BLAST of MELO3C019998.jh1 vs. TAIR 10
Match: AT5G01790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.9 bits (159), Expect = 5.1e-11
Identity = 34/57 (59.65%), Postives = 41/57 (71.93%), Query Frame = 0

Query: 39  SFRV-YYGGATGAIPFRWESRPGTPKHTFSD-TSIPPLTPPPSYFSSSHSTSKASSK 94
           SFR+ YY GA GA+PF WES PGTPKH  S+  ++PPLTPPPS+FS S    +  SK
Sbjct: 62  SFRIYYYDGAAGAVPFEWESHPGTPKHPSSELPTLPPLTPPPSHFSFSGDQIRRRSK 118

BLAST of MELO3C019998.jh1 vs. TAIR 10
Match: AT1G06930.1 (unknown protein; Has 4478 Blast hits to 355 proteins in 82 species: Archae - 0; Bacteria - 29; Metazoa - 379; Fungi - 125; Plants - 120; Viruses - 25; Other Eukaryotes - 3800 (source: NCBI BLink). )

HSP 1 Score: 59.7 bits (143), Expect = 3.6e-09
Identity = 45/98 (45.92%), Postives = 63/98 (64.29%), Query Frame = 0

Query: 43  YYGGATGAIPFRWESRPGTPK-----------HTFSDTSIP---PLTPPPSYFSSSHSTS 102
           YYGG++ A+PF+WES+PGTP+           ++ SD + P   PLTPPPSYF +S S++
Sbjct: 24  YYGGSSAAVPFKWESQPGTPRRLSKRSSSSGFNSDSDFNFPVSAPLTPPPSYFYASPSST 83

Query: 103 KASSKPTLLSSIFPRLTPRKSRTFPSFSSSSGSSSSSS 127
           K  S P   +++F  L   K+R+ PS  +SS SSSSSS
Sbjct: 84  KHVS-PKKTNTLFSSLL-SKNRSVPSSPASSSSSSSSS 119

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_016901982.15.32e-15499.14PREDICTED: putative uncharacterized protein DDB_G0277255 [Cucumis melo] >KAA0052... [more]
XP_011656432.11.45e-14495.28putative protein TPRXL [Cucumis sativus][more]
KAE8646577.14.34e-14195.20hypothetical protein Csa_005771 [Cucumis sativus][more]
XP_038885974.12.41e-12989.27putative protein TPRXL [Benincasa hispida][more]
XP_022134140.17.91e-9672.77putative protein TPRXL [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UC512.57e-15499.14Putative serine-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... [more]
A0A1S4E1782.57e-15499.14Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103496610 PE=4 SV=1[more]
A0A0A0K7T87.00e-14595.28Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014460 PE=4 SV=1[more]
A0A6J1BX953.83e-9672.77Uncharacterized protein OS=Momordica charantia OX=3673 GN=LOC111006479 PE=4 SV=1[more]
A0A6J1K0221.23e-8776.73uncharacterized serine-rich protein C215.13-like OS=Cucurbita maxima OX=3661 GN=... [more]
Match NameE-valueIdentityDescription
AT2G40475.18.1e-1739.61unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G56260.27.8e-1243.48unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G01790.15.1e-1159.65unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G06930.13.6e-0945.92unknown protein; Has 4478 Blast hits to 355 proteins in 82 species: Archae - 0; ... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 252..270
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 237..270
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..94
NoneNo IPR availablePANTHERPTHR33257OS05G0165500 PROTEINcoord: 1..209
NoneNo IPR availablePANTHERPTHR33257:SF24EXPRESSED PROTEINcoord: 1..209

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019998.jh1.t1MELO3C019998.jh1.t1mRNA
MELO3C019998.jh1.t2MELO3C019998.jh1.t2mRNA