MELO3C019975 (gene) Melon (DHL92) v4

Overview
NameMELO3C019975
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionProlamin_like domain-containing protein
Locationchr03: 19884902 .. 19885225 (+)
RNA-Seq ExpressionMELO3C019975
SyntenyMELO3C019975
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGATGTAGACGATGACTACAATTCACCGATATGGAATGGGTGGGTGGACGAAGATAGAGCTTCAAATCTACGACCATGTTTGGATATGATGAAGAGTGCAAAATGTCAAGTACAACTTTACAATTACTACTTCAATATAAGCAAGAAGGAATTGGATCTACAGTGTTGTGTCTTCGTCAAAATCATGGGAAAATATTGTGCTCATGCTTTCGCTGGTTGGTACGAATTCCCTGGTTTGGAAGTCTATGAACCTAATCCTATGATAGTTTACAACAATTGTGTTGGAAGACTCCAAGCTCTCCCACCAACACCATTTTAA

mRNA sequence

ATGGCGGATGTAGACGATGACTACAATTCACCGATATGGAATGGGTGGGTGGACGAAGATAGAGCTTCAAATCTACGACCATGTTTGGATATGATGAAGAGTGCAAAATGTCAAGTACAACTTTACAATTACTACTTCAATATAAGCAAGAAGGAATTGGATCTACAGTGTTGTGTCTTCGTCAAAATCATGGGAAAATATTGTGCTCATGCTTTCGCTGGTTGGTACGAATTCCCTGGTTTGGAAGTCTATGAACCTAATCCTATGATAGTTTACAACAATTGTGTTGGAAGACTCCAAGCTCTCCCACCAACACCATTTTAA

Coding sequence (CDS)

ATGGCGGATGTAGACGATGACTACAATTCACCGATATGGAATGGGTGGGTGGACGAAGATAGAGCTTCAAATCTACGACCATGTTTGGATATGATGAAGAGTGCAAAATGTCAAGTACAACTTTACAATTACTACTTCAATATAAGCAAGAAGGAATTGGATCTACAGTGTTGTGTCTTCGTCAAAATCATGGGAAAATATTGTGCTCATGCTTTCGCTGGTTGGTACGAATTCCCTGGTTTGGAAGTCTATGAACCTAATCCTATGATAGTTTACAACAATTGTGTTGGAAGACTCCAAGCTCTCCCACCAACACCATTTTAA

Protein sequence

MADVDDDYNSPIWNGWVDEDRASNLRPCLDMMKSAKCQVQLYNYYFNISKKELDLQCCVFVKIMGKYCAHAFAGWYEFPGLEVYEPNPMIVYNNCVGRLQALPPTPF
Homology
BLAST of MELO3C019975 vs. NCBI nr
Match: KAA0046841.1 (hypothetical protein E6C27_scaffold216G001410 [Cucumis melo var. makuwa] >TYK04493.1 hypothetical protein E5676_scaffold409G001070 [Cucumis melo var. makuwa])

HSP 1 Score: 240.4 bits (612), Expect = 7.4e-60
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0

Query: 1   MADVDDDYNSPIWNGWVDEDRASNLRPCLDMMKSAKCQVQLYNYYFNISKKELDLQCCVF 60
           MADVDDDYNSPIWNGWVDEDRASNLRPCLDMMKSAKCQVQLYNYYFNISKKELDLQCCVF
Sbjct: 29  MADVDDDYNSPIWNGWVDEDRASNLRPCLDMMKSAKCQVQLYNYYFNISKKELDLQCCVF 88

Query: 61  VKIMGKYCAHAFAGWYEFPGLEVYEPNPMIVYNNCVGRLQALPPTPF 108
           VKIMGKYCAHAFAGWYEFPGLEVYEPNPMIVYNNCVGRLQALPPTPF
Sbjct: 89  VKIMGKYCAHAFAGWYEFPGLEVYEPNPMIVYNNCVGRLQALPPTPF 135

BLAST of MELO3C019975 vs. NCBI nr
Match: KAA0046835.1 (hypothetical protein E6C27_scaffold216G001330 [Cucumis melo var. makuwa] >KAA0046840.1 hypothetical protein E6C27_scaffold216G001400 [Cucumis melo var. makuwa] >KAA0065932.1 hypothetical protein E6C27_scaffold10942G00010 [Cucumis melo var. makuwa] >TYK04499.1 hypothetical protein E5676_scaffold409G001130 [Cucumis melo var. makuwa] >TYK14838.1 hypothetical protein E5676_scaffold6575G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 192.2 bits (487), Expect = 2.3e-45
Identity = 82/104 (78.85%), Postives = 90/104 (86.54%), Query Frame = 0

Query: 4   VDDDYNSPIWNGWVDEDRASNLRPCLDMMKSAKCQVQLYNYYFNISKKELDLQCCVFVKI 63
           VD+DYNSPIW+GWVDEDR   LRPCLD M+SAKCQV+LYNYYFNISKKELDL CCVFVK+
Sbjct: 22  VDEDYNSPIWDGWVDEDRGYTLRPCLDRMRSAKCQVELYNYYFNISKKELDLNCCVFVKV 81

Query: 64  MGKYCAHAFAGWYEFPGLEVYEPNPMIVYNNCVGRLQALPPTPF 108
           MGK CA AF  WY+FPGLE+YEPNPM VYNNC+ RL A PP PF
Sbjct: 82  MGKKCAQAFTFWYQFPGLEIYEPNPMKVYNNCITRLDAPPPAPF 125

BLAST of MELO3C019975 vs. NCBI nr
Match: KAG6578867.1 (hypothetical protein SDJN03_23315, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 191.4 bits (485), Expect = 3.9e-45
Identity = 84/103 (81.55%), Postives = 89/103 (86.41%), Query Frame = 0

Query: 5   DDDYNSPIWNGWVDEDRASNLRPCLDMMKSAKCQVQLYNYYFNISKKELDLQCCVFVKIM 64
           DDDYNSPIW+ WVDEDR  NLRPCLDMMKSAKCQV+LYNYYFNISKKELDL CCVFVK+M
Sbjct: 23  DDDYNSPIWDRWVDEDRGINLRPCLDMMKSAKCQVELYNYYFNISKKELDLNCCVFVKVM 82

Query: 65  GKYCAHAFAGWYEFPGLEVYEPNPMIVYNNCVGRLQALPPTPF 108
           GK CA AFAGW+ FP  EV+E NPM VY NCVGRL ALPP PF
Sbjct: 83  GKRCARAFAGWFRFPEFEVFELNPMKVYKNCVGRLDALPPAPF 125

BLAST of MELO3C019975 vs. NCBI nr
Match: KAG6575254.1 (hypothetical protein SDJN03_25893, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 160.6 bits (405), Expect = 7.4e-36
Identity = 68/103 (66.02%), Postives = 84/103 (81.55%), Query Frame = 0

Query: 5   DDDYNSPIWNGWVDEDRASNLRPCLDMMKSAKCQVQLYNYYFNISKKELDLQCCVFVKIM 64
           DDDYNSPIW+ W+DEDRA  LRPCL++MKSAKCQVQLYN YFN+SK+ELDL CCVF+++M
Sbjct: 20  DDDYNSPIWDRWLDEDRAYYLRPCLNLMKSAKCQVQLYNNYFNLSKEELDLNCCVFIQVM 79

Query: 65  GKYCAHAFAGWYEFPGLEVYEPNPMIVYNNCVGRL-QALPPTP 107
           GK C   FAGW+ +P  EVY+PNPM +Y  C+ RL  ++PP P
Sbjct: 80  GKKCTLNFAGWFNYPIFEVYKPNPMKLYKRCIARLSSSIPPMP 122

BLAST of MELO3C019975 vs. NCBI nr
Match: KAG6575249.1 (hypothetical protein SDJN03_25888, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 160.2 bits (404), Expect = 9.7e-36
Identity = 70/105 (66.67%), Postives = 85/105 (80.95%), Query Frame = 0

Query: 1   MADVDDDYNSPIWNGWVDEDRASNLRPCLDMMKSAKCQVQLYNYYFNISKKELDLQCCVF 60
           +   D DYNSPIW+ W+DEDRA  LRPCL++MKSAKCQVQLYN YFN+SK+ELDL CCVF
Sbjct: 26  VTSADVDYNSPIWDRWLDEDRAYYLRPCLNLMKSAKCQVQLYNNYFNLSKEELDLNCCVF 85

Query: 61  VKIMGKYCAHAFAGWYEFPGLEVYEPNPMIVYNNCVGRL-QALPP 105
           VK+MGK CA  FAGW+++P  EVY+PNPM +Y  CV RL  ++PP
Sbjct: 86  VKVMGKNCALDFAGWFDYPIFEVYKPNPMNLYKRCVARLSSSIPP 130

BLAST of MELO3C019975 vs. ExPASy TrEMBL
Match: A0A5A7TZR1 (Prolamin_like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001070 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 3.6e-60
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0

Query: 1   MADVDDDYNSPIWNGWVDEDRASNLRPCLDMMKSAKCQVQLYNYYFNISKKELDLQCCVF 60
           MADVDDDYNSPIWNGWVDEDRASNLRPCLDMMKSAKCQVQLYNYYFNISKKELDLQCCVF
Sbjct: 29  MADVDDDYNSPIWNGWVDEDRASNLRPCLDMMKSAKCQVQLYNYYFNISKKELDLQCCVF 88

Query: 61  VKIMGKYCAHAFAGWYEFPGLEVYEPNPMIVYNNCVGRLQALPPTPF 108
           VKIMGKYCAHAFAGWYEFPGLEVYEPNPMIVYNNCVGRLQALPPTPF
Sbjct: 89  VKIMGKYCAHAFAGWYEFPGLEVYEPNPMIVYNNCVGRLQALPPTPF 135

BLAST of MELO3C019975 vs. ExPASy TrEMBL
Match: A0A5D3C280 (Prolamin_like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001130 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.1e-45
Identity = 82/104 (78.85%), Postives = 90/104 (86.54%), Query Frame = 0

Query: 4   VDDDYNSPIWNGWVDEDRASNLRPCLDMMKSAKCQVQLYNYYFNISKKELDLQCCVFVKI 63
           VD+DYNSPIW+GWVDEDR   LRPCLD M+SAKCQV+LYNYYFNISKKELDL CCVFVK+
Sbjct: 22  VDEDYNSPIWDGWVDEDRGYTLRPCLDRMRSAKCQVELYNYYFNISKKELDLNCCVFVKV 81

Query: 64  MGKYCAHAFAGWYEFPGLEVYEPNPMIVYNNCVGRLQALPPTPF 108
           MGK CA AF  WY+FPGLE+YEPNPM VYNNC+ RL A PP PF
Sbjct: 82  MGKKCAQAFTFWYQFPGLEIYEPNPMKVYNNCITRLDAPPPAPF 125

BLAST of MELO3C019975 vs. ExPASy TrEMBL
Match: A0A0A0KEB8 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G054340 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.7e-44
Identity = 81/103 (78.64%), Postives = 88/103 (85.44%), Query Frame = 0

Query: 4   VDDDYNSPIWNGWVDEDRASNLRPCLDMMKSAKCQVQLYNYYFNISKKELDLQCCVFVKI 63
           VD+DYNS IWN W+DEDRA  LRPCLD M+SAKCQV+LYNYYFNISKKELDL CCVFVK+
Sbjct: 29  VDEDYNSSIWNDWLDEDRAFTLRPCLDRMRSAKCQVELYNYYFNISKKELDLNCCVFVKV 88

Query: 64  MGKYCAHAFAGWYEFPGLEVYEPNPMIVYNNCVGRLQALPPTP 107
           MGK CA AF  WY+FPGLE+YEPNPM VYNNC  RL A PPTP
Sbjct: 89  MGKKCAQAFTFWYQFPGLEIYEPNPMKVYNNCATRLSAPPPTP 131

BLAST of MELO3C019975 vs. ExPASy TrEMBL
Match: A0A0A0KQ41 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G381840 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 3.7e-33
Identity = 68/103 (66.02%), Postives = 76/103 (73.79%), Query Frame = 0

Query: 4   VDDDYNSPIWNGWVDEDRASNLRPCLDMMKSAKCQVQLYNYYFNISKKELDLQCCVFVKI 63
           VDD+  S IW+ W+DEDRA  L PCL MM+S KCQV+LYNYYFNISKKELDL CCV+V  
Sbjct: 30  VDDNGISSIWSDWLDEDRAPTLAPCLHMMRSEKCQVELYNYYFNISKKELDLSCCVYVNY 89

Query: 64  MGKYCAHAFAGWYEFPGLEVYEPNPMIVYNNCVGRLQALPPTP 107
           MGK CA AF  W+ FP LE  +PNPM VYNNC  RL    PTP
Sbjct: 90  MGKKCAAAFEFWFSFPSLEALKPNPMKVYNNCFKRLTFPAPTP 132

BLAST of MELO3C019975 vs. ExPASy TrEMBL
Match: A0A0A0L535 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G008300 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.5e-26
Identity = 57/103 (55.34%), Postives = 73/103 (70.87%), Query Frame = 0

Query: 4   VDDDYNSPIWNGWVDEDRASNLRPCLDMMKSAKCQVQLYNYYFNISKKELDLQCCVFVKI 63
           +DD+  S IW+GW+D+DRA  L  CL +MKS KCQV+LYNYYFN SKKE+DL CCV+V  
Sbjct: 33  IDDNGISSIWSGWIDKDRAPILASCLYLMKSDKCQVELYNYYFNKSKKEVDLSCCVYVNY 92

Query: 64  MGKYCAHAFAGWYEFPGLEVYEPNPMIVYNNCVGRLQA-LPPT 106
           +G+ CA +F  W+   G +  +PNPM +YNNC  RL    PPT
Sbjct: 93  IGEECAASFESWFSSLGFKALKPNPMKLYNNCFKRLTVPAPPT 135

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0046841.17.4e-60100.00hypothetical protein E6C27_scaffold216G001410 [Cucumis melo var. makuwa] >TYK044... [more]
KAA0046835.12.3e-4578.85hypothetical protein E6C27_scaffold216G001330 [Cucumis melo var. makuwa] >KAA004... [more]
KAG6578867.13.9e-4581.55hypothetical protein SDJN03_23315, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6575254.17.4e-3666.02hypothetical protein SDJN03_25893, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6575249.19.7e-3666.67hypothetical protein SDJN03_25888, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TZR13.6e-60100.00Prolamin_like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A5D3C2801.1e-4578.85Prolamin_like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A0A0KEB84.7e-4478.64Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G0543... [more]
A0A0A0KQ413.7e-3366.02Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G3818... [more]
A0A0A0L5351.5e-2655.34Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G0083... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008502Prolamin-like domainPFAMPF05617Prolamin_likecoord: 28..95
e-value: 8.9E-6
score: 25.8

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019975.1MELO3C019975.1mRNA