MELO3C019891.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C019891.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionRRM domain-containing protein
Locationchr03: 21604818 .. 21608996 (+)
RNA-Seq ExpressionMELO3C019891.jh1
SyntenyMELO3C019891.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
GCAAAACATGGAGATTACTTATGAAGTTGATAACAATTTGCAAATTAACCTATCGATTCCACTTTCATAACTCAAACTCAAGTCGGTACCCCAAAAGGACCAACATCTTAGAGTCCCAATTACCGGTGAGGTGTTTGCTTGATTGCCACCATTGAAGCGTGTTCCAATGGAGCTACTCTCTCCCTCACCCACAACGAATTTCTCATTCCACTCCCTCAAACCCCATTTCCGATCCTCCGCCATTAACACCCATTTCCCTCTACCTTTAAGTAAAACGAAAAAATTCCTACTTTCTTCTTCTTATCTGTACTCCACTGTTCCTCTTCGCTGTTCTGTTGCAGTTAATTTAGCTTCAACATCCACTCCTTCTACTTCTTCTCTCTGGTCTCCGACTTTCGGCGAAAACCGCCACTGGAGGGTCCTCATGGAGAGACCCCCATCAGGGCTCAATTCAAAACCACAAGTCATTGATTACTACGTCAAGGCCTTGGAAAGAGTTTTGGGCAGGTTGGTGTTCCTCGTGTTTTACTGTTTGATTGTACTGCATCGTTTTTCTTTTTCTCACTGTTTTTTTTTTTTTTAATTTTTTTTAATTTTATCATTGGGATTATATGATTAGTGAGAAGGATGCCCAGATGTGTATTTATGATGCTTCCTGGGATACACACTTTGGATTTTGTTGTGACATTGATGAACAAGCTTCCATTGAGCTTGCAAGTAAGTAAAATGAATGTTAGCTCGTTTGTCTATGGGTATTGGCGTTTGAAAACAGTACTTAAAAGTGAAAAGTACTCTTAAGCATCTTCAAAGATGAATTAGTTATTAGTTCTCCTCCTAGAATCACCTTAGTGCATTTTAGTGTTTTAAGAATTTTGAAGGCCTTTTTTTTCTATTTTCTAACCACACTAGGGAAGTTTTGGAGAGTGATTTTCAAAGTGTTTTTAGTGGGCTATAGAAACACTTTTCACCTTTTTAAAGTGTTATAAACCTACCCTTTTGATAGATTCATCGATTTTTTTATTGGTTAAAACTGATCATCTTCCATACTTTCACTTACAAAAATAAAAATTTCACCAGGCATTGCAATTTTTGTTGATTTTCATAAGAGCATCTGTTACAGGAGTACCTGGGGTTATATCTGTTGAGCCTGACCCGAACCTCAGTTCCATAGAGAAGGATAATGGTTCTTCAACTCCTCCATTGAATCTGAAATCATATTCGCAAAATGGCAGTAGGGTCTTGTTCCCTTTGGGGAATACCAAGCATTGGCTTGTTCGAATAGACAAGCCAGGTATTGGGGTGGTTACCAAGGCACAAATGGTTGATTATTATGTTGAGATACTGACCAAAGTTCTGGGGAAGTAAGTGTACTATTGAATGTAACGAAAGTAGTTGCTTCCATTTCGTTTATGATATTTTCATTGTCCCTCAAGAATGGTTATGTTAATTGTCTGTAGTGACAAGGATGCCCAAATGTGTATATATCACGTTTCCTGGCAGTCTAGCTTTGGTTTTTGTTGTGAATTGGATGAGGAATGTGCACGAGAACTAGCCGGTAATCTCCAGTTTCCTATGACACTTTTGCACTTTATTCTGTGAGTGATAGTTCTATGTTGTTTGATGCTAATTCTCTCAAGATGCAGGTGTTCCTGGTGTTTTATCTGTTCAGCTAGATGCAAACTTTGAGGCAGAGAATAAGGATTATGGAGGTTAAATCTTTTAACATTGAGTAAATCTTTCAATTCCAATTCTTAGTTGTGGTTTCATTGCTTGAGATAAACAACTGTTTTTGCCCATTCTTTTCTAACTTAAAGGATTCTAGTCCCTTTTTGCTTTTGTTGATCCTACCTTACTTGGTGATTTTTCCTATATTTCAAAATTTTACCTTTCGGACTGTGTAGTGCTGGCTTCTTAGATGGATGGTCGAAATTGTTAGATTTGATTATTGAGTAGATATCGCTTATCCTTTTGTTGGACTGATGAAAATTAACCAAAAGACAAAGATTATTAGGATAAATTGTTGGTATATATTTTGAGAGAAAATACTTGCAGGAATTTAGTTCTTTTGTCCTGAAGCATAAGCTAAAATAAGATCTTATAATAAAGAAGAATGTGGGCAAAAAAGGTTGGCCTACAATTGCAAATTTCATTTTGGTGATCTCAGCCTTCTTTTTTGGCTAATTGCCATTTTTTAATATATATATATATTAGAAACCTTTTTAGCTGTAATGGGGCAATGAAGTTATCTGAAATAACTATCACTTTTTATTTGGTTTGTTGTTGATAGTAGCTAAGCAAACAGGGAACTTGTGTTATATTTACATGTTAATTCTTAATCAAGTTATTCATACTGTGTGATTGTAATGGTAAATGCTACAGGGTATTTGCTAGAATTGTAATTTGATTTATTTGTAACTATTAACTCAATTATTTCCATTAATTTCTTTGAATTAATTACCTGCATTTTTCAGGTAATATTGCCAAGAATCCTTTGGATCTACCAGATTCTTCAGGAACACATCAAACAACTCCTGTGAAAACAAAGAAACTATTTATAACTGGTATTGGCAATTCAAAACATGCTAGATTATAAGATTTTTACATTCACTTCTATGAGCACTGTCACTGATATTATTCCACATTTCAGGTGTAGTTTTTGAATATGAACGCCTTAGTGAGCCAAAATATCATTGTTCTGTTTAATGTTCTTAAAAAATGAACGCAAAGGCTCTTCAGTAGCTTCATCATGACATGAGAAGGAGGTGGGGGCTGGGATGTCTTATAAAAGGATTTTATTCAGTGTGAGCCAAATGGCAACATGGACATAAAGGATATTGTTAGGAACTAAGGTATTATGAGCTACCTTTGTCCCATATTGGTTAGAATGGGATGAGCATTATGGTACTTAAGCAGTTGTCTCTCCCACCTCAATAGTTGGTTTTTTCTAGTGTGGTTTTCCAAGGTGTTTAAGTACCTAATTGATATTTGGCCCCTTTCTTAAGGGAAAAAACTAGAGAATGTTTTATCCATTGACATGTCTTTTGAAAAAAATCCTTTTAAATGGAAACACACGCTTTGGGTGGAAGCAATGATTGAAAACTTCTCCTAAAATCCTTTAACTATTATCTTTTTAAATGTTTAGAATTTTCAGAATCTTTTGATTTTAACCGCTCTGGATTGATTTAGTGGTGGTCAATAAAGCCAATGTAAACATGCATAAGTTAGTGGGAATGAGTTCAAAACATAGCAGTCACGTACCTAAAATTTGATTCGTACAAGTTTCTTTGACAACTAAATGTAGTAGGGTTAAAAAATTGCTCGTAAGAATAGTCGAGATCACTTTTGATCTATGGTTTTGTTTTGTTATTGGAGAAAAAATATGTTCGGGCACAAAATTGAAAACCATAACATGTTCATCTTCTCAATTTCTTGAAACTCCTATTTGACACTGCTTATTGCTTTCAAAACGAGACAGGACTTTCATTTTATACATCAGAGAAAACCTTACGTGCTGCATTTGAAGGCTTTGGCGAGCTGGTTGAAGGTATGTTGCATTGATCATGTGATTTTAAACTCTAACAAGTTCTCATGAGACAAAATCATGGTGTTGTTGATTACTTTTCTAAACAGTTAAGATCATAATGGACAAAATCTCCAAAAGGTCCAAGGGCTATGCATTTATAGAGTATACAACAGAGGAGGCTGCCAGTGCTGCCCTCAAAGAAATGAATGGCAAGGTGAATAAACATGAGTTCTATCTCTCCCTCTCCCCTTGTTGCTTTCTTATCTGCCATATATATTCTCTGTGTTTGATGCAGATCATCAATGGCTGGATGATAGTTGTCGATGTTGCTAAGCCTAGTCCTCGTAGATACGGTGGAAACCGCTCCCGACCCTAGGTAAAAGAAGGCACGTAAAATTTTGAGTAGTCAGTTAGAAACTTAGAATTTACTAGTTTAGCTCAAAGTGTTTGAGCCTTGAGACTAGGGAGCTACTCATTCAGCTCAGTGCCAATTTGAGGCAAGAGAAGAATTACAATTAAAAATGCACACACACATATATATAAAAGAATTAGGAAGACTAAAACTTACTACATCTTCCTTAAAATATTGTCAAATTACTTATTTTTGCCACATCAACATTAAACACAATAAAAAATTCATGTTAAATTTGTGTTAA

mRNA sequence

GCAAAACATGGAGATTACTTATGAAGTTGATAACAATTTGCAAATTAACCTATCGATTCCACTTTCATAACTCAAACTCAAGTCGGTACCCCAAAAGGACCAACATCTTAGAGTCCCAATTACCGGTGAGGTGTTTGCTTGATTGCCACCATTGAAGCGTGTTCCAATGGAGCTACTCTCTCCCTCACCCACAACGAATTTCTCATTCCACTCCCTCAAACCCCATTTCCGATCCTCCGCCATTAACACCCATTTCCCTCTACCTTTAAGTAAAACGAAAAAATTCCTACTTTCTTCTTCTTATCTGTACTCCACTGTTCCTCTTCGCTGTTCTGTTGCAGTTAATTTAGCTTCAACATCCACTCCTTCTACTTCTTCTCTCTGGTCTCCGACTTTCGGCGAAAACCGCCACTGGAGGGTCCTCATGGAGAGACCCCCATCAGGGCTCAATTCAAAACCACAAGTCATTGATTACTACGTCAAGGCCTTGGAAAGAGTTTTGGGCAGTGAGAAGGATGCCCAGATGTGTATTTATGATGCTTCCTGGGATACACACTTTGGATTTTGTTGTGACATTGATGAACAAGCTTCCATTGAGCTTGCAAGAGTACCTGGGGTTATATCTGTTGAGCCTGACCCGAACCTCAGTTCCATAGAGAAGGATAATGGTTCTTCAACTCCTCCATTGAATCTGAAATCATATTCGCAAAATGGCAGTAGGGTCTTGTTCCCTTTGGGGAATACCAAGCATTGGCTTGTTCGAATAGACAAGCCAGGTATTGGGGTGGTTACCAAGGCACAAATGGTTGATTATTATGTTGAGATACTGACCAAAGTTCTGGGGAATGACAAGGATGCCCAAATGTGTATATATCACGTTTCCTGGCAGTCTAGCTTTGGTTTTTGTTGTGAATTGGATGAGGAATGTGCACGAGAACTAGCCGGTGTTCCTGGTGTTTTATCTGTTCAGCTAGATGCAAACTTTGAGGCAGAGAATAAGGATTATGGAGGTAATATTGCCAAGAATCCTTTGGATCTACCAGATTCTTCAGGAACACATCAAACAACTCCTGTGAAAACAAAGAAACTATTTATAACTGGACTTTCATTTTATACATCAGAGAAAACCTTACGTGCTGCATTTGAAGGCTTTGGCGAGCTGGTTGAAGTTAAGATCATAATGGACAAAATCTCCAAAAGGTCCAAGGGCTATGCATTTATAGAGTATACAACAGAGGAGGCTGCCAGTGCTGCCCTCAAAGAAATGAATGGCAAGATCATCAATGGCTGGATGATAGTTGTCGATGTTGCTAAGCCTAGTCCTCGTAGATACGGTGGAAACCGCTCCCGACCCTAGGTAAAAGAAGGCACGTAAAATTTTGAGTAGTCAGTTAGAAACTTAGAATTTACTAGTTTAGCTCAAAGTGTTTGAGCCTTGAGACTAGGGAGCTACTCATTCAGCTCAGTGCCAATTTGAGGCAAGAGAAGAATTACAATTAAAAATGCACACACACATATATATAAAAGAATTAGGAAGACTAAAACTTACTACATCTTCCTTAAAATATTGTCAAATTACTTATTTTTGCCACATCAACATTAAACACAATAAAAAATTCATGTTAAATTTGTGTTAA

Coding sequence (CDS)

ATGGAGCTACTCTCTCCCTCACCCACAACGAATTTCTCATTCCACTCCCTCAAACCCCATTTCCGATCCTCCGCCATTAACACCCATTTCCCTCTACCTTTAAGTAAAACGAAAAAATTCCTACTTTCTTCTTCTTATCTGTACTCCACTGTTCCTCTTCGCTGTTCTGTTGCAGTTAATTTAGCTTCAACATCCACTCCTTCTACTTCTTCTCTCTGGTCTCCGACTTTCGGCGAAAACCGCCACTGGAGGGTCCTCATGGAGAGACCCCCATCAGGGCTCAATTCAAAACCACAAGTCATTGATTACTACGTCAAGGCCTTGGAAAGAGTTTTGGGCAGTGAGAAGGATGCCCAGATGTGTATTTATGATGCTTCCTGGGATACACACTTTGGATTTTGTTGTGACATTGATGAACAAGCTTCCATTGAGCTTGCAAGAGTACCTGGGGTTATATCTGTTGAGCCTGACCCGAACCTCAGTTCCATAGAGAAGGATAATGGTTCTTCAACTCCTCCATTGAATCTGAAATCATATTCGCAAAATGGCAGTAGGGTCTTGTTCCCTTTGGGGAATACCAAGCATTGGCTTGTTCGAATAGACAAGCCAGGTATTGGGGTGGTTACCAAGGCACAAATGGTTGATTATTATGTTGAGATACTGACCAAAGTTCTGGGGAATGACAAGGATGCCCAAATGTGTATATATCACGTTTCCTGGCAGTCTAGCTTTGGTTTTTGTTGTGAATTGGATGAGGAATGTGCACGAGAACTAGCCGGTGTTCCTGGTGTTTTATCTGTTCAGCTAGATGCAAACTTTGAGGCAGAGAATAAGGATTATGGAGGTAATATTGCCAAGAATCCTTTGGATCTACCAGATTCTTCAGGAACACATCAAACAACTCCTGTGAAAACAAAGAAACTATTTATAACTGGACTTTCATTTTATACATCAGAGAAAACCTTACGTGCTGCATTTGAAGGCTTTGGCGAGCTGGTTGAAGTTAAGATCATAATGGACAAAATCTCCAAAAGGTCCAAGGGCTATGCATTTATAGAGTATACAACAGAGGAGGCTGCCAGTGCTGCCCTCAAAGAAATGAATGGCAAGATCATCAATGGCTGGATGATAGTTGTCGATGTTGCTAAGCCTAGTCCTCGTAGATACGGTGGAAACCGCTCCCGACCCTAG

Protein sequence

MELLSPSPTTNFSFHSLKPHFRSSAINTHFPLPLSKTKKFLLSSSYLYSTVPLRCSVAVNLASTSTPSTSSLWSPTFGENRHWRVLMERPPSGLNSKPQVIDYYVKALERVLGSEKDAQMCIYDASWDTHFGFCCDIDEQASIELARVPGVISVEPDPNLSSIEKDNGSSTPPLNLKSYSQNGSRVLFPLGNTKHWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQMCIYHVSWQSSFGFCCELDEECARELAGVPGVLSVQLDANFEAENKDYGGNIAKNPLDLPDSSGTHQTTPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKPSPRRYGGNRSRP
Homology
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BLAST of MELO3C019891.jh1 vs. NCBI nr
Match: XP_008456591.1 (PREDICTED: uncharacterized protein LOC103496502 [Cucumis melo])

HSP 1 Score: 803 bits (2073), Expect = 2.54e-293
Identity = 396/396 (100.00%), Postives = 396/396 (100.00%), Query Frame = 0 

Query: 1   MELLSPSPTTNFSFHSLKPHFRSSAINTHFPLPLSKTKKFLLSSSYLYSTVPLRCSVAVN 60
           MELLSPSPTTNFSFHSLKPHFRSSAINTHFPLPLSKTKKFLLSSSYLYSTVPLRCSVAVN
Sbjct: 1   MELLSPSPTTNFSFHSLKPHFRSSAINTHFPLPLSKTKKFLLSSSYLYSTVPLRCSVAVN 60

Query: 61  LASTSTPSTSSLWSPTFGENRHWRVLMERPPSGLNSKPQVIDYYVKALERVLGSEKDAQM 120
           LASTSTPSTSSLWSPTFGENRHWRVLMERPPSGLNSKPQVIDYYVKALERVLGSEKDAQM
Sbjct: 61  LASTSTPSTSSLWSPTFGENRHWRVLMERPPSGLNSKPQVIDYYVKALERVLGSEKDAQM 120

Query: 121 CIYDASWDTHFGFCCDIDEQASIELARVPGVISVEPDPNLSSIEKDNGSSTPPLNLKSYS 180
           CIYDASWDTHFGFCCDIDEQASIELARVPGVISVEPDPNLSSIEKDNGSSTPPLNLKSYS
Sbjct: 121 CIYDASWDTHFGFCCDIDEQASIELARVPGVISVEPDPNLSSIEKDNGSSTPPLNLKSYS 180

Query: 181 QNGSRVLFPLGNTKHWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQMCIYHVSW 240
           QNGSRVLFPLGNTKHWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQMCIYHVSW
Sbjct: 181 QNGSRVLFPLGNTKHWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQMCIYHVSW 240

Query: 241 QSSFGFCCELDEECARELAGVPGVLSVQLDANFEAENKDYGGNIAKNPLDLPDSSGTHQT 300
           QSSFGFCCELDEECARELAGVPGVLSVQLDANFEAENKDYGGNIAKNPLDLPDSSGTHQT
Sbjct: 241 QSSFGFCCELDEECARELAGVPGVLSVQLDANFEAENKDYGGNIAKNPLDLPDSSGTHQT 300

Query: 301 TPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 360
           TPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA
Sbjct: 301 TPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 360

Query: 361 SAALKEMNGKIINGWMIVVDVAKPSPRRYGGNRSRP 396
           SAALKEMNGKIINGWMIVVDVAKPSPRRYGGNRSRP
Sbjct: 361 SAALKEMNGKIINGWMIVVDVAKPSPRRYGGNRSRP 396

[Close]
BLAST of MELO3C019891.jh1 vs. NCBI nr
Match: XP_004140988.1 (organelle RRM domain-containing protein 1, chloroplastic [Cucumis sativus] >KGN46029.1 hypothetical protein Csa_005241 [Cucumis sativus])

HSP 1 Score: 780 bits (2015), Expect = 1.64e-284
Identity = 384/394 (97.46%), Postives = 389/394 (98.73%), Query Frame = 0 

Query: 1   MELLSPSPTTNFSFHSLKPHFRSSAINTHFPLPLSKTKKFLLSSSYLYSTVPLRCSVAVN 60
           MELLSP+PTTNFSFHSLKPHF+SSAIN  FPLPLSKTKKFLLSSSYLYSTVPLRCSVAVN
Sbjct: 1   MELLSPTPTTNFSFHSLKPHFQSSAINISFPLPLSKTKKFLLSSSYLYSTVPLRCSVAVN 60

Query: 61  LASTSTPSTSSLWSPTFGENRHWRVLMERPPSGLNSKPQVIDYYVKALERVLGSEKDAQM 120
           LASTSTPSTSSLWSPTFGENRHWRVLMERPPSGLNSKPQVIDYYVKALERVLGSEKDAQM
Sbjct: 61  LASTSTPSTSSLWSPTFGENRHWRVLMERPPSGLNSKPQVIDYYVKALERVLGSEKDAQM 120

Query: 121 CIYDASWDTHFGFCCDIDEQASIELARVPGVISVEPDPNLSSIEKDNGSSTPPLNLKSYS 180
           CIYDASWDT FGFCCDIDEQASIELARVPGVISVEPDPN SSIEKDNGSSTPPLNLKSYS
Sbjct: 121 CIYDASWDTRFGFCCDIDEQASIELARVPGVISVEPDPNFSSIEKDNGSSTPPLNLKSYS 180

Query: 181 QNGSRVLFPLGNTKHWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQMCIYHVSW 240
           QNGSRVLFPLGNTKHWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQMCIYHVSW
Sbjct: 181 QNGSRVLFPLGNTKHWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQMCIYHVSW 240

Query: 241 QSSFGFCCELDEECARELAGVPGVLSVQLDANFEAENKDYGGNIAKNPLDLPDSSGTHQT 300
           QSSFGFCCELDEECARELAGVPGVLSVQLDANFEAENKDYGGNIAKNP DLPDSSGTHQT
Sbjct: 241 QSSFGFCCELDEECARELAGVPGVLSVQLDANFEAENKDYGGNIAKNPSDLPDSSGTHQT 300

Query: 301 TPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 360
           TPVKTKKLFITGLSFYTSEKTLRAAFEGFG+LVEVKIIMDKISKRSKGYAF+EYTTEEAA
Sbjct: 301 TPVKTKKLFITGLSFYTSEKTLRAAFEGFGKLVEVKIIMDKISKRSKGYAFVEYTTEEAA 360

Query: 361 SAALKEMNGKIINGWMIVVDVAKPSPRRYGGNRS 394
           SAALKEMNGKIINGWMIVVD+AKPSPRRYGGNRS
Sbjct: 361 SAALKEMNGKIINGWMIVVDIAKPSPRRYGGNRS 394

[Close]
BLAST of MELO3C019891.jh1 vs. NCBI nr
Match: TYK11755.1 (uncharacterized protein E5676_scaffold304G00740 [Cucumis melo var. makuwa])

HSP 1 Score: 744 bits (1922), Expect = 1.07e-270
Identity = 371/396 (93.69%), Postives = 372/396 (93.94%), Query Frame = 0 

Query: 1   MELLSPSPTTNFSFHSLKPHFRSSAINTHFPLPLSKTKKFLLSSSYLYSTVPLRCSVAVN 60
           MELLSPSPTTNFSFHSLKPHFRSSAINTHFPLPL                        +N
Sbjct: 1   MELLSPSPTTNFSFHSLKPHFRSSAINTHFPLPL------------------------IN 60

Query: 61  LASTSTPSTSSLWSPTFGENRHWRVLMERPPSGLNSKPQVIDYYVKALERVLGSEKDAQM 120
           LASTSTPSTSSLWSPTFGENRHWRVLMERPPSGLNSKPQVIDYYVKALERVLGSEKDAQM
Sbjct: 61  LASTSTPSTSSLWSPTFGENRHWRVLMERPPSGLNSKPQVIDYYVKALERVLGSEKDAQM 120

Query: 121 CIYDASWDTHFGFCCDIDEQASIELARVPGVISVEPDPNLSSIEKDNGSSTPPLNLKSYS 180
           CIYDASWDTHFGFCCDIDEQASIELARVPGVISVEPDPNLSSIEKDNGSSTPPLNLKSYS
Sbjct: 121 CIYDASWDTHFGFCCDIDEQASIELARVPGVISVEPDPNLSSIEKDNGSSTPPLNLKSYS 180

Query: 181 QNGSRVLFPLGNTKHWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQMCIYHVSW 240
           QNGSRVLFPLGNTKHWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQMCIYHVSW
Sbjct: 181 QNGSRVLFPLGNTKHWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQMCIYHVSW 240

Query: 241 QSSFGFCCELDEECARELAGVPGVLSVQLDANFEAENKDYGGNIAKNPLDLPDSSGTHQT 300
           QSSFGFCCELDEECARELAGVPGVLSVQLDANFEAENKDYGGNIAKNPLDLPDSSGTHQT
Sbjct: 241 QSSFGFCCELDEECARELAGVPGVLSVQLDANFEAENKDYGGNIAKNPLDLPDSSGTHQT 300

Query: 301 TPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 360
           TPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA
Sbjct: 301 TPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 360

Query: 361 SAALKEMNGKIINGWMIVVDVAKPSPRRYGGNRSRP 396
           SAALKEMNGKIINGWMIVVDVAKPSPRRYGGNRSRP
Sbjct: 361 SAALKEMNGKIINGWMIVVDVAKPSPRRYGGNRSRP 372

[Close]
BLAST of MELO3C019891.jh1 vs. NCBI nr
Match: XP_038884142.1 (organelle RRM domain-containing protein 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 733 bits (1891), Expect = 1.82e-265
Identity = 365/403 (90.57%), Postives = 377/403 (93.55%), Query Frame = 0 

Query: 1   MELLSPSPTTN----FSFHSLKPHFRSSAINTHFPLPLSKTKKFLLSSS---YLYSTVPL 60
           MELLSPS T N    FSFHSLKPHF+SSAIN +FP  LSK  KFLLSSS   YLYST+PL
Sbjct: 1   MELLSPSATVNTSRNFSFHSLKPHFQSSAINVNFPPSLSKRNKFLLSSSSSSYLYSTLPL 60

Query: 61  RCSVAVNLASTSTPSTSSLWSPTFGENRHWRVLMERPPSGLNSKPQVIDYYVKALERVLG 120
           RCSV VNLASTSTPSTS +WSPTFGENRHWRVLMERPPSGLNSKP+VIDYYVKALERVLG
Sbjct: 61  RCSVTVNLASTSTPSTSPVWSPTFGENRHWRVLMERPPSGLNSKPEVIDYYVKALERVLG 120

Query: 121 SEKDAQMCIYDASWDTHFGFCCDIDEQASIELARVPGVISVEPDPNLSSIEKDNGSSTPP 180
           SEKDAQMCIYDASWDTHFGFCCDIDEQ SIELARVPGV+SV+PDPN SS + DNGSSTPP
Sbjct: 121 SEKDAQMCIYDASWDTHFGFCCDIDEQTSIELARVPGVLSVKPDPNFSSRDMDNGSSTPP 180

Query: 181 LNLKSYSQNGSRVLFPLGNTKHWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQM 240
           LN KSY QNG R+LFP GNTKHWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQM
Sbjct: 181 LNPKSYLQNGGRLLFPSGNTKHWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQM 240

Query: 241 CIYHVSWQSSFGFCCELDEECARELAGVPGVLSVQLDANFEAENKDYGGNIAKNPLDLPD 300
           CIYH+SWQSSFGFCCELDEECA+ELAGVPGV SVQLDANFEAENKDYGGNIAKNPLDLPD
Sbjct: 241 CIYHISWQSSFGFCCELDEECAQELAGVPGVKSVQLDANFEAENKDYGGNIAKNPLDLPD 300

Query: 301 SSGTHQTTPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIE 360
           SSGT+QTTPVKTKKLFITGLSFYTSEKTLRAAFE FGELVEVKIIMDKISKRSKGYAFIE
Sbjct: 301 SSGTNQTTPVKTKKLFITGLSFYTSEKTLRAAFESFGELVEVKIIMDKISKRSKGYAFIE 360

Query: 361 YTTEEAASAALKEMNGKIINGWMIVVDVAKPSPRRYGGNRSRP 396
           YTTEEAASAALKEMNGKIINGWMIVVDVAKPSPRRYGGNRSRP
Sbjct: 361 YTTEEAASAALKEMNGKIINGWMIVVDVAKPSPRRYGGNRSRP 403

[Close]
BLAST of MELO3C019891.jh1 vs. NCBI nr
Match: XP_023524278.1 (organelle RRM domain-containing protein 1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 689 bits (1778), Expect = 3.10e-248
Identity = 346/404 (85.64%), Postives = 364/404 (90.10%), Query Frame = 0 

Query: 1   MELLSPSPTTN----FSFHSLKPHFRSSAINTHFPLPLSKTKKFLLSSS----YLYSTVP 60
           MELLSPS T +    FSFHS K HF+SSAIN +F    SK  KF +SSS    YL+STVP
Sbjct: 1   MELLSPSATVSTSNQFSFHSCKTHFQSSAININFRRSPSKKNKFSISSSSSSSYLHSTVP 60

Query: 61  LRCSVAVNLASTSTPSTSSLWSPTFGENRHWRVLMERPPSGLNSKPQVIDYYVKALERVL 120
           LRCSV VNLASTSTPSTSS+WSP  G NRHWRVLMERPPSG +SKP+++DYYVKALERVL
Sbjct: 61  LRCSVIVNLASTSTPSTSSVWSPIIGGNRHWRVLMERPPSGFDSKPEIVDYYVKALERVL 120

Query: 121 GSEKDAQMCIYDASWDTHFGFCCDIDEQASIELARVPGVISVEPDPNLSSIEKDNGSSTP 180
           GSEKDAQMCIYDASWDT+F FCCDIDEQ SIELARVPGVISV+PDPN SS EKD+GSSTP
Sbjct: 121 GSEKDAQMCIYDASWDTYFEFCCDIDEQTSIELARVPGVISVKPDPNFSSTEKDHGSSTP 180

Query: 181 PLNLKSYSQNGSRVLFPLGNTKHWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQ 240
            LN KS  QNG R+LFP G TKHWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQ
Sbjct: 181 QLNPKSDPQNGGRLLFPSGKTKHWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQ 240

Query: 241 MCIYHVSWQSSFGFCCELDEECARELAGVPGVLSVQLDANFEAENKDYGGNIAKNPLDLP 300
           MCIYH+SWQS+FGFCCELDEECA+EL GVPGVLSVQLDANFEAENKDYGG IAKNPLDLP
Sbjct: 241 MCIYHISWQSNFGFCCELDEECAQELTGVPGVLSVQLDANFEAENKDYGGTIAKNPLDLP 300

Query: 301 DSSGTHQTTPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFI 360
           DSS T+QTTPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFI
Sbjct: 301 DSSETNQTTPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFI 360

Query: 361 EYTTEEAASAALKEMNGKIINGWMIVVDVAKPSPRRYGGNRSRP 396
           EYTTEEAA AALKEMNGKIINGWMIVVDVAKPSPRRYGGNRSRP
Sbjct: 361 EYTTEEAAGAALKEMNGKIINGWMIVVDVAKPSPRRYGGNRSRP 404

[Close]
BLAST of MELO3C019891.jh1 vs. ExPASy Swiss-Prot
Match: Q8L440 (Organelle RRM domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ORRM1 PE=1 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 2.0e-113
Identity = 219/359 (61.00%), Postives = 266/359 (74.09%), Query Frame = 0 

Query: 38  KKFLLSSSYLYSTVPLRCSVAVNLASTSTPSTSSLWSPTFGENRHWRVLMERPPSGLNSK 97
           +K  LSSS+L  +     S A++   +ST  T          N +W VL+++PP  ++SK
Sbjct: 42  RKTSLSSSHLVFS-----SSAISAPPSSTVLT---------RNSYWMVLLDKPPHWVSSK 101

Query: 98  PQVIDYYVKALERVLGSEKDAQMCIYDASWDTHFGFCCDIDEQASIELARVPGVISVEPD 157
             ++DYYV+ L +VLG+EKDAQ+ IYDAS+DTHFGFCC IDE AS +LA +PGV+S+ P+
Sbjct: 102 SAMVDYYVEILAKVLGNEKDAQVSIYDASFDTHFGFCCHIDEDASRQLASLPGVVSIRPE 161

Query: 158 PNLSSIEKDNGSSTPPLNLKSYSQNGSRVLFPLGNTKHWLVRIDKPGIGVVTKAQMVDYY 217
            + SS +K+ G           S  G   LF  G  KHW+VRIDKPG+G+VTKAQMVD+ 
Sbjct: 162 QDYSSEKKNYGIG---------SHKGVS-LFDHGTVKHWMVRIDKPGVGIVTKAQMVDHC 221

Query: 218 VEILTKVLGNDKDAQMCIYHVSWQSSFGFCCELDEECARELAGVPGVLSVQLDANFEAEN 277
           V++L+KVL N+KDAQMC+YHVSWQS FGFCC+LDE  A ELAGVPGVL+V  D +FE+ N
Sbjct: 222 VQLLSKVLWNEKDAQMCLYHVSWQSDFGFCCDLDERSAVELAGVPGVLAVVPDNSFESLN 281

Query: 278 KDYGGNIAKNPLDLPDSSGTHQTTPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKI 337
           KDY G+  ++  D  DS    ++ PVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKI
Sbjct: 282 KDYEGDSTQDSRDQDDS----ESPPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKI 341

Query: 338 IMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKPSPRRYGGNRSRP 397
           IMDKISKRSKGYAF+EYTTEEAA  ALKEMNGKIINGWMIVVDVAK  P R   NRS+P
Sbjct: 342 IMDKISKRSKGYAFLEYTTEEAAGTALKEMNGKIINGWMIVVDVAKTKPFRQ--NRSQP 370

[Close]
BLAST of MELO3C019891.jh1 vs. ExPASy Swiss-Prot
Match: Q6YWP9 (Organelle RRM domain-containing protein 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=ORRM1 PE=3 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 4.8e-99
Identity = 196/340 (57.65%), Postives = 243/340 (71.47%), Query Frame = 0 

Query: 59  VNLASTSTPSTSSLWSPTFGENRH---WRVLMERPPS----GLNSKPQVIDYYVKALERV 118
           + LAS +  S   L  P      H   W V+MERPP+    G  S+ + +D+YV  L RV
Sbjct: 48  LRLASAAASSPPPL--PAASAQPHCSRWVVVMERPPAPAGGGEVSRAEAVDHYVATLARV 107

Query: 119 LGSEKDAQMCIYDASWDTHFGFCCDIDEQASIELARVPGVISVEPDPN-LSSIEKDN-GS 178
           LGS+++AQM IYDASWD  + F C+ID++AS +LA++PGV++V+PD + +   EKDN GS
Sbjct: 108 LGSQEEAQMRIYDASWDGSYEFSCEIDDEASRDLAKMPGVLAVKPDTDKVDMSEKDNHGS 167

Query: 179 STPPLNLKSYSQNGSRVLFPLGNTKHWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDK 238
                NL ++S   S      G  + WLVR++KPG+ VVTKAQMVD+Y + L KVLGN+K
Sbjct: 168 GLSAANLGNFSDAVSNHSSSSGENEFWLVRMEKPGVEVVTKAQMVDHYTQTLMKVLGNEK 227

Query: 239 DAQMCIYHVSWQSSFGFCCELDEECARELAGVPGVLSVQLDANFEAENKDYGGNIAKNPL 298
           DAQ+ IYH+SW+  +GFCC +DEECA+ELA V GVLSVQ D NF ++NK+Y G+      
Sbjct: 228 DAQVSIYHISWERDYGFCCHIDEECAKELADVSGVLSVQPDTNFGSDNKNYKGD------ 287

Query: 299 DLPDSSGTHQTT--PVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSK 358
              DS  + + T   VKTK+LF+TGLSFYTSEKTLRAAFE FGELVEVKIIMDKISKRSK
Sbjct: 288 ---DSFKSSEATQAEVKTKRLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSK 347

Query: 359 GYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKPSPR 388
           GYAFIEYTTEEA  AALK MNG+IINGWMIVVDVAK   R
Sbjct: 348 GYAFIEYTTEEAGGAALKAMNGQIINGWMIVVDVAKHRSR 376

[Close]
BLAST of MELO3C019891.jh1 vs. ExPASy Swiss-Prot
Match: C0HFE5 (Organelle RRM domain-containing protein 1, chloroplastic OS=Zea mays OX=4577 GN=ORRM1 PE=2 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 3.2e-95
Identity = 204/389 (52.44%), Postives = 250/389 (64.27%), Query Frame = 0 

Query: 4   LSPSPTTNFSFHSLKPHFRSSAINTHFPLPLSKTKKFLLSSSYLYSTVPLRCSVAVNLAS 63
           +S S  T     S+  H  +S++         +    L SSS          S    LA+
Sbjct: 18  VSISTATKAGSQSISSHLSTSSLRLTARHRNRRRLPLLASSSE---------SPPAQLAA 77

Query: 64  TSTPSTSSLWSPTFGENRHWRVLMERPPSGLN----SKPQVIDYYVKALERVLGSEKDAQ 123
            ST S S         +  W V+M+ PP+       S+ + +DYY   L +V+GSEK+AQ
Sbjct: 78  ASTESQS--------RSSRWVVVMDTPPAAAGGSGVSRAEAVDYYAATLAQVVGSEKEAQ 137

Query: 124 MCIYDASWDTHFGFCCDIDEQASIELARVPGVISVEPDPNLSSIEKDNGS-STPPLNLKS 183
           M I +ASWD  + F C+IDE AS ELA++PGV+SV+ D    S EKDN S S    NL S
Sbjct: 138 MRICEASWDGTYEFRCEIDEDASKELAKMPGVLSVQLDMGNKS-EKDNHSLSLSTANLVS 197

Query: 184 YSQNGSRVLFPLGNTKHWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQMCIYHV 243
            S   S      G  + WLVR++KPG+ VVTKAQMVD+Y +IL KVLGN++DAQ+ IYHV
Sbjct: 198 ISDGAS--TSSSGKNEFWLVRMEKPGVEVVTKAQMVDHYTQILMKVLGNEQDAQVSIYHV 257

Query: 244 SWQSSFGFCCELDEECARELAGVPGVLSVQLDANFEAENKDYGGNIAKNPLDLPDSSGTH 303
           SW   +GFCC +DEECA+ELA VPGVLSVQ D NF ++NK+Y G+      D   SS   
Sbjct: 258 SWDRDYGFCCHIDEECAKELADVPGVLSVQPDTNFGSDNKNYKGD------DGVKSSEGT 317

Query: 304 QTTPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEE 363
               +KTK+LF+TGLSFYTSEKTLRAAFE FGELVEVKIIMD+ISKRSKGYAF+EYTTEE
Sbjct: 318 GAVDIKTKRLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDRISKRSKGYAFVEYTTEE 377

Query: 364 AASAALKEMNGKIINGWMIVVDVAKPSPR 388
           A  AALK MNG+IINGWMIVVDVAK   R
Sbjct: 378 AGGAALKAMNGQIINGWMIVVDVAKTRSR 380

[Close]
BLAST of MELO3C019891.jh1 vs. ExPASy Swiss-Prot
Match: Q9C7Y2 (Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF5 PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.8e-21
Identity = 55/131 (41.98%), Postives = 82/131 (62.60%), Query Frame = 0 

Query: 163 IEKDNGSSTPPLNLKSYSQNGSRV------LFPLGNTKHWLVRIDKPGIGVVTKAQMVDY 222
           +++  GS +P   LKS S    R       LFP  + +HWL+ +DKPG    TK QM+D 
Sbjct: 60  MDRSGGSYSP---LKSGSNFSDRAPTEMAPLFPGCDYEHWLIVMDKPGGENATKQQMIDC 119

Query: 223 YVEILTKVLGNDKDAQMCIYHVSWQSSFGFCCELDEECARELAGVPGVLSVQLDANFEAE 282
           YV+ L K++G++++A+  IY+VS +  FGF CE+DEE + +L G+PGVL +  D+  + E
Sbjct: 120 YVQTLAKIIGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFILPDSYVDQE 179

Query: 283 NKDYGGNIAKN 288
           NKDYG  +  N
Sbjct: 180 NKDYGAELFVN 187

[Close]
BLAST of MELO3C019891.jh1 vs. ExPASy Swiss-Prot
Match: O22793 (Multiple organellar RNA editing factor 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MORF2 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.6e-20
Identity = 53/125 (42.40%), Postives = 78/125 (62.40%), Query Frame = 0 

Query: 167 NGSSTPPLNLKSYSQNGSRV----LFPLGNTKHWLVRIDKPGIGVVTKAQMVDYYVEILT 226
           +GS+  PLN  S   +        LFP  + +HWL+ +DKPG    TK QM+D Y++ L 
Sbjct: 54  SGSTYSPLNSGSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLA 113

Query: 227 KVLGNDKDAQMCIYHVSWQSSFGFCCELDEECARELAGVPGVLSVQLDANFEAENKDYGG 286
           KV+G++++A+  IY+VS +   GF CE+DEE + +L G+PGVL V  D+  + ENKDYG 
Sbjct: 114 KVVGSEEEAKKRIYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGA 173

Query: 287 NIAKN 288
            +  N
Sbjct: 174 ELFVN 178

[Close]
BLAST of MELO3C019891.jh1 vs. ExPASy TrEMBL
Match: A0A1S3C4A1 (uncharacterized protein LOC103496502 OS=Cucumis melo OX=3656 GN=LOC103496502 PE=4 SV=1)

HSP 1 Score: 803 bits (2073), Expect = 1.23e-293
Identity = 396/396 (100.00%), Postives = 396/396 (100.00%), Query Frame = 0 

Query: 1   MELLSPSPTTNFSFHSLKPHFRSSAINTHFPLPLSKTKKFLLSSSYLYSTVPLRCSVAVN 60
           MELLSPSPTTNFSFHSLKPHFRSSAINTHFPLPLSKTKKFLLSSSYLYSTVPLRCSVAVN
Sbjct: 1   MELLSPSPTTNFSFHSLKPHFRSSAINTHFPLPLSKTKKFLLSSSYLYSTVPLRCSVAVN 60

Query: 61  LASTSTPSTSSLWSPTFGENRHWRVLMERPPSGLNSKPQVIDYYVKALERVLGSEKDAQM 120
           LASTSTPSTSSLWSPTFGENRHWRVLMERPPSGLNSKPQVIDYYVKALERVLGSEKDAQM
Sbjct: 61  LASTSTPSTSSLWSPTFGENRHWRVLMERPPSGLNSKPQVIDYYVKALERVLGSEKDAQM 120

Query: 121 CIYDASWDTHFGFCCDIDEQASIELARVPGVISVEPDPNLSSIEKDNGSSTPPLNLKSYS 180
           CIYDASWDTHFGFCCDIDEQASIELARVPGVISVEPDPNLSSIEKDNGSSTPPLNLKSYS
Sbjct: 121 CIYDASWDTHFGFCCDIDEQASIELARVPGVISVEPDPNLSSIEKDNGSSTPPLNLKSYS 180

Query: 181 QNGSRVLFPLGNTKHWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQMCIYHVSW 240
           QNGSRVLFPLGNTKHWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQMCIYHVSW
Sbjct: 181 QNGSRVLFPLGNTKHWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQMCIYHVSW 240

Query: 241 QSSFGFCCELDEECARELAGVPGVLSVQLDANFEAENKDYGGNIAKNPLDLPDSSGTHQT 300
           QSSFGFCCELDEECARELAGVPGVLSVQLDANFEAENKDYGGNIAKNPLDLPDSSGTHQT
Sbjct: 241 QSSFGFCCELDEECARELAGVPGVLSVQLDANFEAENKDYGGNIAKNPLDLPDSSGTHQT 300

Query: 301 TPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 360
           TPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA
Sbjct: 301 TPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 360

Query: 361 SAALKEMNGKIINGWMIVVDVAKPSPRRYGGNRSRP 396
           SAALKEMNGKIINGWMIVVDVAKPSPRRYGGNRSRP
Sbjct: 361 SAALKEMNGKIINGWMIVVDVAKPSPRRYGGNRSRP 396

[Close]
BLAST of MELO3C019891.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KB33 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G045080 PE=4 SV=1)

HSP 1 Score: 780 bits (2015), Expect = 7.92e-285
Identity = 384/394 (97.46%), Postives = 389/394 (98.73%), Query Frame = 0 

Query: 1   MELLSPSPTTNFSFHSLKPHFRSSAINTHFPLPLSKTKKFLLSSSYLYSTVPLRCSVAVN 60
           MELLSP+PTTNFSFHSLKPHF+SSAIN  FPLPLSKTKKFLLSSSYLYSTVPLRCSVAVN
Sbjct: 1   MELLSPTPTTNFSFHSLKPHFQSSAINISFPLPLSKTKKFLLSSSYLYSTVPLRCSVAVN 60

Query: 61  LASTSTPSTSSLWSPTFGENRHWRVLMERPPSGLNSKPQVIDYYVKALERVLGSEKDAQM 120
           LASTSTPSTSSLWSPTFGENRHWRVLMERPPSGLNSKPQVIDYYVKALERVLGSEKDAQM
Sbjct: 61  LASTSTPSTSSLWSPTFGENRHWRVLMERPPSGLNSKPQVIDYYVKALERVLGSEKDAQM 120

Query: 121 CIYDASWDTHFGFCCDIDEQASIELARVPGVISVEPDPNLSSIEKDNGSSTPPLNLKSYS 180
           CIYDASWDT FGFCCDIDEQASIELARVPGVISVEPDPN SSIEKDNGSSTPPLNLKSYS
Sbjct: 121 CIYDASWDTRFGFCCDIDEQASIELARVPGVISVEPDPNFSSIEKDNGSSTPPLNLKSYS 180

Query: 181 QNGSRVLFPLGNTKHWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQMCIYHVSW 240
           QNGSRVLFPLGNTKHWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQMCIYHVSW
Sbjct: 181 QNGSRVLFPLGNTKHWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQMCIYHVSW 240

Query: 241 QSSFGFCCELDEECARELAGVPGVLSVQLDANFEAENKDYGGNIAKNPLDLPDSSGTHQT 300
           QSSFGFCCELDEECARELAGVPGVLSVQLDANFEAENKDYGGNIAKNP DLPDSSGTHQT
Sbjct: 241 QSSFGFCCELDEECARELAGVPGVLSVQLDANFEAENKDYGGNIAKNPSDLPDSSGTHQT 300

Query: 301 TPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 360
           TPVKTKKLFITGLSFYTSEKTLRAAFEGFG+LVEVKIIMDKISKRSKGYAF+EYTTEEAA
Sbjct: 301 TPVKTKKLFITGLSFYTSEKTLRAAFEGFGKLVEVKIIMDKISKRSKGYAFVEYTTEEAA 360

Query: 361 SAALKEMNGKIINGWMIVVDVAKPSPRRYGGNRS 394
           SAALKEMNGKIINGWMIVVD+AKPSPRRYGGNRS
Sbjct: 361 SAALKEMNGKIINGWMIVVDIAKPSPRRYGGNRS 394

[Close]
BLAST of MELO3C019891.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CJP7 (RRM domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00740 PE=4 SV=1)

HSP 1 Score: 744 bits (1922), Expect = 5.16e-271
Identity = 371/396 (93.69%), Postives = 372/396 (93.94%), Query Frame = 0 

Query: 1   MELLSPSPTTNFSFHSLKPHFRSSAINTHFPLPLSKTKKFLLSSSYLYSTVPLRCSVAVN 60
           MELLSPSPTTNFSFHSLKPHFRSSAINTHFPLPL                        +N
Sbjct: 1   MELLSPSPTTNFSFHSLKPHFRSSAINTHFPLPL------------------------IN 60

Query: 61  LASTSTPSTSSLWSPTFGENRHWRVLMERPPSGLNSKPQVIDYYVKALERVLGSEKDAQM 120
           LASTSTPSTSSLWSPTFGENRHWRVLMERPPSGLNSKPQVIDYYVKALERVLGSEKDAQM
Sbjct: 61  LASTSTPSTSSLWSPTFGENRHWRVLMERPPSGLNSKPQVIDYYVKALERVLGSEKDAQM 120

Query: 121 CIYDASWDTHFGFCCDIDEQASIELARVPGVISVEPDPNLSSIEKDNGSSTPPLNLKSYS 180
           CIYDASWDTHFGFCCDIDEQASIELARVPGVISVEPDPNLSSIEKDNGSSTPPLNLKSYS
Sbjct: 121 CIYDASWDTHFGFCCDIDEQASIELARVPGVISVEPDPNLSSIEKDNGSSTPPLNLKSYS 180

Query: 181 QNGSRVLFPLGNTKHWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQMCIYHVSW 240
           QNGSRVLFPLGNTKHWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQMCIYHVSW
Sbjct: 181 QNGSRVLFPLGNTKHWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQMCIYHVSW 240

Query: 241 QSSFGFCCELDEECARELAGVPGVLSVQLDANFEAENKDYGGNIAKNPLDLPDSSGTHQT 300
           QSSFGFCCELDEECARELAGVPGVLSVQLDANFEAENKDYGGNIAKNPLDLPDSSGTHQT
Sbjct: 241 QSSFGFCCELDEECARELAGVPGVLSVQLDANFEAENKDYGGNIAKNPLDLPDSSGTHQT 300

Query: 301 TPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 360
           TPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA
Sbjct: 301 TPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 360

Query: 361 SAALKEMNGKIINGWMIVVDVAKPSPRRYGGNRSRP 396
           SAALKEMNGKIINGWMIVVDVAKPSPRRYGGNRSRP
Sbjct: 361 SAALKEMNGKIINGWMIVVDVAKPSPRRYGGNRSRP 372

[Close]
BLAST of MELO3C019891.jh1 vs. ExPASy TrEMBL
Match: A0A6J1JMS7 (organelle RRM domain-containing protein 1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487251 PE=4 SV=1)

HSP 1 Score: 688 bits (1775), Expect = 3.71e-248
Identity = 344/400 (86.00%), Postives = 361/400 (90.25%), Query Frame = 0 

Query: 1   MELLSPSPTTN----FSFHSLKPHFRSSAINTHFPLPLSKTKKFLLSSSYLYSTVPLRCS 60
           MELL PS T +    FSFHS K HF+SSAIN +F    SK  KFLLSSSYL+STVPLRCS
Sbjct: 1   MELLLPSATVSTSNQFSFHSCKTHFQSSAININFRRSPSKRNKFLLSSSYLHSTVPLRCS 60

Query: 61  VAVNLASTSTPSTSSLWSPTFGENRHWRVLMERPPSGLNSKPQVIDYYVKALERVLGSEK 120
           V VNLAS+STPSTSSLWSP  GENRHWRVLMERPPSG +SKP ++DYYVKALERVLGSEK
Sbjct: 61  VIVNLASSSTPSTSSLWSPIIGENRHWRVLMERPPSGFDSKPGIVDYYVKALERVLGSEK 120

Query: 121 DAQMCIYDASWDTHFGFCCDIDEQASIELARVPGVISVEPDPNLSSIEKDNGSSTPPLNL 180
           DAQMCIYDASWDT F FCCDIDEQ SIELARVPGVISV+PDPN SS EKD+GSSTP LN 
Sbjct: 121 DAQMCIYDASWDTDFEFCCDIDEQTSIELARVPGVISVKPDPNFSSTEKDHGSSTPQLNP 180

Query: 181 KSYSQNGSRVLFPLGNTKHWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQMCIY 240
           KS  QNG R+LFP G T +WLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQMCIY
Sbjct: 181 KSDPQNGGRLLFPSGKTNNWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQMCIY 240

Query: 241 HVSWQSSFGFCCELDEECARELAGVPGVLSVQLDANFEAENKDYGGNIAKNPLDLPDSSG 300
           H+SWQ +FGFCCELDEECA+EL GVPGVLSVQLDANFEAENKDYGG +AKNPLDLPDSS 
Sbjct: 241 HISWQFNFGFCCELDEECAQELTGVPGVLSVQLDANFEAENKDYGGTVAKNPLDLPDSSE 300

Query: 301 THQTTPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTT 360
           T+QTTPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTT
Sbjct: 301 TNQTTPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTT 360

Query: 361 EEAASAALKEMNGKIINGWMIVVDVAKPSPRRYGGNRSRP 396
           EEAA AALKEMNGKIINGWMIVVDVAKPSPRRYGGNRSRP
Sbjct: 361 EEAAGAALKEMNGKIINGWMIVVDVAKPSPRRYGGNRSRP 400

[Close]
BLAST of MELO3C019891.jh1 vs. ExPASy TrEMBL
Match: A0A6J1JPX9 (organelle RRM domain-containing protein 1, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487251 PE=4 SV=1)

HSP 1 Score: 682 bits (1760), Expect = 8.29e-246
Identity = 344/404 (85.15%), Postives = 361/404 (89.36%), Query Frame = 0 

Query: 1   MELLSPSPTTN----FSFHSLKPHFRSSAINTHFPLPLSKTKKFLLSSSYLYSTVPLRCS 60
           MELL PS T +    FSFHS K HF+SSAIN +F    SK  KFLLSSSYL+STVPLRCS
Sbjct: 1   MELLLPSATVSTSNQFSFHSCKTHFQSSAININFRRSPSKRNKFLLSSSYLHSTVPLRCS 60

Query: 61  VAVNLASTSTPSTSSLWSPTFGENRHWRVLMERPPSGLNSKPQVIDYYVKALERVLGSEK 120
           V VNLAS+STPSTSSLWSP  GENRHWRVLMERPPSG +SKP ++DYYVKALERVLGSEK
Sbjct: 61  VIVNLASSSTPSTSSLWSPIIGENRHWRVLMERPPSGFDSKPGIVDYYVKALERVLGSEK 120

Query: 121 DAQMCIYDASWDTHFGFCCDIDEQASIELARVPGVISVEPDPNLSSIEKDNGSSTPPLNL 180
           DAQMCIYDASWDT F FCCDIDEQ SIELARVPGVISV+PDPN SS EKD+GSSTP LN 
Sbjct: 121 DAQMCIYDASWDTDFEFCCDIDEQTSIELARVPGVISVKPDPNFSSTEKDHGSSTPQLNP 180

Query: 181 KSYSQNGSRVLFPLGNTKHWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQMCIY 240
           KS  QNG R+LFP G T +WLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQMCIY
Sbjct: 181 KSDPQNGGRLLFPSGKTNNWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQMCIY 240

Query: 241 HVSWQSSFGFCCELDEECARELAGVPGVLSVQLDANFEAENKDYG----GNIAKNPLDLP 300
           H+SWQ +FGFCCELDEECA+EL GVPGVLSVQLDANFEAENKDYG    G +AKNPLDLP
Sbjct: 241 HISWQFNFGFCCELDEECAQELTGVPGVLSVQLDANFEAENKDYGSKLHGTVAKNPLDLP 300

Query: 301 DSSGTHQTTPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFI 360
           DSS T+QTTPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFI
Sbjct: 301 DSSETNQTTPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFI 360

Query: 361 EYTTEEAASAALKEMNGKIINGWMIVVDVAKPSPRRYGGNRSRP 396
           EYTTEEAA AALKEMNGKIINGWMIVVDVAKPSPRRYGGNRSRP
Sbjct: 361 EYTTEEAAGAALKEMNGKIINGWMIVVDVAKPSPRRYGGNRSRP 404

[Close]
BLAST of MELO3C019891.jh1 vs. TAIR 10
Match: AT3G20930.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 410.6 bits (1054), Expect = 1.4e-114
Identity = 219/359 (61.00%), Postives = 266/359 (74.09%), Query Frame = 0 

Query: 38  KKFLLSSSYLYSTVPLRCSVAVNLASTSTPSTSSLWSPTFGENRHWRVLMERPPSGLNSK 97
           +K  LSSS+L  +     S A++   +ST  T          N +W VL+++PP  ++SK
Sbjct: 42  RKTSLSSSHLVFS-----SSAISAPPSSTVLT---------RNSYWMVLLDKPPHWVSSK 101

Query: 98  PQVIDYYVKALERVLGSEKDAQMCIYDASWDTHFGFCCDIDEQASIELARVPGVISVEPD 157
             ++DYYV+ L +VLG+EKDAQ+ IYDAS+DTHFGFCC IDE AS +LA +PGV+S+ P+
Sbjct: 102 SAMVDYYVEILAKVLGNEKDAQVSIYDASFDTHFGFCCHIDEDASRQLASLPGVVSIRPE 161

Query: 158 PNLSSIEKDNGSSTPPLNLKSYSQNGSRVLFPLGNTKHWLVRIDKPGIGVVTKAQMVDYY 217
            + SS +K+ G           S  G   LF  G  KHW+VRIDKPG+G+VTKAQMVD+ 
Sbjct: 162 QDYSSEKKNYGIG---------SHKGVS-LFDHGTVKHWMVRIDKPGVGIVTKAQMVDHC 221

Query: 218 VEILTKVLGNDKDAQMCIYHVSWQSSFGFCCELDEECARELAGVPGVLSVQLDANFEAEN 277
           V++L+KVL N+KDAQMC+YHVSWQS FGFCC+LDE  A ELAGVPGVL+V  D +FE+ N
Sbjct: 222 VQLLSKVLWNEKDAQMCLYHVSWQSDFGFCCDLDERSAVELAGVPGVLAVVPDNSFESLN 281

Query: 278 KDYGGNIAKNPLDLPDSSGTHQTTPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKI 337
           KDY G+  ++  D  DS    ++ PVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKI
Sbjct: 282 KDYEGDSTQDSRDQDDS----ESPPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKI 341

Query: 338 IMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKPSPRRYGGNRSRP 397
           IMDKISKRSKGYAF+EYTTEEAA  ALKEMNGKIINGWMIVVDVAK  P R   NRS+P
Sbjct: 342 IMDKISKRSKGYAFLEYTTEEAAGTALKEMNGKIINGWMIVVDVAKTKPFRQ--NRSQP 370

[Close]
BLAST of MELO3C019891.jh1 vs. TAIR 10
Match: AT1G32580.1 (plastid developmental protein DAG, putative )

HSP 1 Score: 105.1 bits (261), Expect = 1.3e-22
Identity = 55/131 (41.98%), Postives = 82/131 (62.60%), Query Frame = 0 

Query: 163 IEKDNGSSTPPLNLKSYSQNGSRV------LFPLGNTKHWLVRIDKPGIGVVTKAQMVDY 222
           +++  GS +P   LKS S    R       LFP  + +HWL+ +DKPG    TK QM+D 
Sbjct: 60  MDRSGGSYSP---LKSGSNFSDRAPTEMAPLFPGCDYEHWLIVMDKPGGENATKQQMIDC 119

Query: 223 YVEILTKVLGNDKDAQMCIYHVSWQSSFGFCCELDEECARELAGVPGVLSVQLDANFEAE 282
           YV+ L K++G++++A+  IY+VS +  FGF CE+DEE + +L G+PGVL +  D+  + E
Sbjct: 120 YVQTLAKIIGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFILPDSYVDQE 179

Query: 283 NKDYGGNIAKN 288
           NKDYG  +  N
Sbjct: 180 NKDYGAELFVN 187

[Close]
BLAST of MELO3C019891.jh1 vs. TAIR 10
Match: AT2G33430.1 (differentiation and greening-like 1 )

HSP 1 Score: 101.3 bits (251), Expect = 1.8e-21
Identity = 53/125 (42.40%), Postives = 78/125 (62.40%), Query Frame = 0 

Query: 167 NGSSTPPLNLKSYSQNGSRV----LFPLGNTKHWLVRIDKPGIGVVTKAQMVDYYVEILT 226
           +GS+  PLN  S   +        LFP  + +HWL+ +DKPG    TK QM+D Y++ L 
Sbjct: 54  SGSTYSPLNSGSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLA 113

Query: 227 KVLGNDKDAQMCIYHVSWQSSFGFCCELDEECARELAGVPGVLSVQLDANFEAENKDYGG 286
           KV+G++++A+  IY+VS +   GF CE+DEE + +L G+PGVL V  D+  + ENKDYG 
Sbjct: 114 KVVGSEEEAKKRIYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGA 173

Query: 287 NIAKN 288
            +  N
Sbjct: 174 ELFVN 178

[Close]
BLAST of MELO3C019891.jh1 vs. TAIR 10
Match: AT2G35240.1 (plastid developmental protein DAG, putative )

HSP 1 Score: 97.1 bits (240), Expect = 3.5e-20
Identity = 53/131 (40.46%), Postives = 80/131 (61.07%), Query Frame = 0 

Query: 163 IEKDNGSSTPPLNLKSYSQNGSR------VLFPLGNTKHWLVRIDKPGIGVVTKAQMVDY 222
           +++  GS +P   LKS S    R       LFP  + +HWL+ ++KPG     K QM+D 
Sbjct: 63  MDRSGGSYSP---LKSGSNFSDRPPTEMAPLFPGCDYEHWLIVMEKPGGENAQKQQMIDC 122

Query: 223 YVEILTKVLGNDKDAQMCIYHVSWQSSFGFCCELDEECARELAGVPGVLSVQLDANFEAE 282
           YV+ L K++G++++A+  IY+VS +  FGF CE+DEE + +L G+PGVL V  D+  + E
Sbjct: 123 YVQTLAKIVGSEEEARKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPE 182

Query: 283 NKDYGGNIAKN 288
            KDYG  +  N
Sbjct: 183 FKDYGAELFVN 190

[Close]
BLAST of MELO3C019891.jh1 vs. TAIR 10
Match: AT1G73530.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 91.7 bits (226), Expect = 1.5e-18
Identity = 52/141 (36.88%), Postives = 80/141 (56.74%), Query Frame = 0 

Query: 243 SFGFCCELDEECARELAGVPGVLSVQLDANFEAENKDYGGNIAKNPLDLPDSSGTHQTTP 302
           +F   C +   C R   G  GV+S +         +D GG +  + L    SS    ++ 
Sbjct: 24  NFSAICSV--SCGRINVGT-GVISAR-------RRRDIGGVLISSCLSTDSSSSPPSSSS 83

Query: 303 VKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 362
               KL+++GLSF T+E TLR  FE FG L+ + ++MDK++ R KG+AF+ Y TEE A  
Sbjct: 84  GPKTKLYVSGLSFRTTEDTLRDTFEQFGNLIHMNMVMDKVANRPKGFAFLRYETEEEAMK 143

Query: 363 ALKEMNGKIINGWMIVVDVAK 384
           A++ M+GK ++G +I V+ AK
Sbjct: 144 AIQGMHGKFLDGRVIFVEEAK 154

The following BLAST results are available for this feature:
BLAST of MELO3C019891.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008456591.12.54e-293100.00PREDICTED: uncharacterized protein LOC103496502 [Cucumis melo][more]
XP_004140988.11.64e-28497.46organelle RRM domain-containing protein 1, chloroplastic [Cucumis sativus] >KGN4... [more]
TYK11755.11.07e-27093.69uncharacterized protein E5676_scaffold304G00740 [Cucumis melo var. makuwa][more]
XP_038884142.11.82e-26590.57organelle RRM domain-containing protein 1, chloroplastic [Benincasa hispida][more]
XP_023524278.13.10e-24885.64organelle RRM domain-containing protein 1, chloroplastic [Cucurbita pepo subsp. ... [more]
BLAST of MELO3C019891.jh1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8L4402.0e-11361.00Organelle RRM domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana... [more]
Q6YWP94.8e-9957.65Organelle RRM domain-containing protein 1, chloroplastic OS=Oryza sativa subsp. ... [more]
C0HFE53.2e-9552.44Organelle RRM domain-containing protein 1, chloroplastic OS=Zea mays OX=4577 GN=... [more]
Q9C7Y21.8e-2141.98Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial OS=Arabido... [more]
O227932.6e-2042.40Multiple organellar RNA editing factor 2, chloroplastic OS=Arabidopsis thaliana ... [more]
BLAST of MELO3C019891.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3C4A11.23e-293100.00uncharacterized protein LOC103496502 OS=Cucumis melo OX=3656 GN=LOC103496502 PE=... [more]
A0A0A0KB337.92e-28597.46RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G045080 PE=4 SV... [more]
A0A5D3CJP75.16e-27193.69RRM domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more]
A0A6J1JMS73.71e-24886.00organelle RRM domain-containing protein 1, chloroplastic isoform X2 OS=Cucurbita... [more]
A0A6J1JPX98.29e-24685.15organelle RRM domain-containing protein 1, chloroplastic isoform X1 OS=Cucurbita... [more]
BLAST of MELO3C019891.jh1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G20930.11.4e-11461.00RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT1G32580.11.3e-2241.98plastid developmental protein DAG, putative [more]
AT2G33430.11.8e-2142.40differentiation and greening-like 1 [more]
AT2G35240.13.5e-2040.46plastid developmental protein DAG, putative [more]
AT1G73530.11.5e-1836.88RNA-binding (RRM/RBD/RNP motifs) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 307..380
e-value: 2.9E-26
score: 103.3
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 308..374
e-value: 2.4E-19
score: 68.9
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 306..384
score: 18.939054
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 291..396
e-value: 3.0E-30
score: 107.1
IPR037045Peptidase S8 propeptide/proteinase inhibitor I9 superfamilyGENE3D3.30.70.80Peptidase S8 propeptide/proteinase inhibitor I9coord: 190..274
e-value: 2.0E-8
score: 36.5
coord: 68..161
e-value: 1.8E-7
score: 33.5
NoneNo IPR availablePANTHERPTHR31346:SF11ORGANELLE RRM DOMAIN-CONTAINING PROTEIN 1, CHLOROPLASTICcoord: 35..395
IPR039206MORF/ORRM1/DAG-likePANTHERPTHR31346MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATEDcoord: 35..395
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 297..394

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019891.jh1.t1MELO3C019891.jh1.t1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016554 cytidine to uridine editing
molecular_function GO:0003676 nucleic acid binding