MELO3C019841.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C019841.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	SHUGOSHIN 2-like isoform X1
Location	chr03: 22448635 .. 22451693 (-)
RNA-Seq Expression	MELO3C019841.jh1
Synteny	MELO3C019841.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

TATCACATTAGAAATTTACCCTCAAACTTTTATCAATTTCGCGCTCTTCACTCTCCTCTCAGCAGAAGAAACTTTTATCCTTCTTTCCAAGATCTCTTGTTTAAGCTGAAAGATTTCAGGGTTCCATCGTAGAATCTCCAGCATGGAGAATATCATTTCGCTCGATCCGAAGAACTGCGGCGTTGTAGGTACTTTTTGTTTTTTTTTTCACTCAGTGCAAATTTCTTGATCTTTTCCTTCTCTTCAAATTCTTCAGATTCCCGTTTGTTTCCGCCCGATTGGTATTAGTACAGTTGGATTTCCGGAAAATTATTCTGTTTCTAGGCATTGGGATTGCTTAATTCGAACTCTAGTTGCATCTGGGGTTTATATCATTTACGAAGGGTCTAGGTTTTGCTTAATTAAATCCTGTTGTTCCTACCGTTTAGGGGTTTTGTCAATTTTGGCTGAATTATTTAATTTAGGTGAACTACCTCGGCCTTGTTCTTAGTAAATCGAAGCAAGCGATTTTCAAGTTTGTCTTAGTGACTGAGAAAGTTGGTTTTAGGTCAAAACGTGAAAATAGCTGGGGAGAAAACGATGAAGAGCTCCAAAGGGCAGAGGAAAAGGCTTTCCGATATAAGCAACTTGAAGGAGCAACCTACACTGCAGAAGCGAGATACGAAGACGCAGCCGGGTTTGCTTATGACCTATGAATATGTTGATAAGTTACAGAAGGTAATTCTGATGTGTTCTATAAGCTGCCCTGTTTGATTGGCTAATATTATTGATGATGTTTTGATTTTTCTTTCCAGGAAAATATGACACTCATGAAAGTTATCGCGGAAAGAAAGTATCCTTTTTGACAGGTTATATTTATCCATAACCAGCAATAGCAATTTTTTTTTCTGAGCTTTCTTTTTCTTTTTAATTAATGAAGTTTTTCCTTGATGAGTATTTTCAAATAGTCGCATAATTGAGATAAGTGGAAATGAGTTAGAGAAATTGAGAACCAATTTTCAGAAATTGCAGCAGCAGAACATGCAACTTGCCCAAGCAAACTGTCAAATGCTAGCGGTAATTTTGAATCTGCTTTTTTCTGTCTTTAGTTTCTATTGTATCACTTGTTCATGAGAAACTAATAACCTAGAAAATAAATTTAATACCTGGAATGCGTTTTTTTTTTTCTTTCTATTTTCAGGAACTGAATTCAAGTAAAGATCGGGTGAGATAAATTTCTGTGATCTGAAATTTGATTTAGTTTCCACATCAAACCCCCTTTAAGTTGCTGCAACTGAAACTAATTTTATTTTATGCAGTTAAAAGCGCTTCAGCATGAGCTTGGATGTAAAAATGGCATTCTTATGTCCAGAAAGCTGGTTTTGGAGGTTACTTCGATTCCTTTTAGTCATTTCAAATTTGCAACTGAGTGTTTATTGATTACTGACACTAAAAATTTTTTTCCCAGAGTAAAGGAAAATCAGCAACACTTCAACCTGGAGAGGTGCATAAACAATACTATTGTTATTCTTTAGTAAATATTTCTTAGGCTACTTACACATTTCTTTTCTGTACCTCAAGGTAGGGACCACGGAATGTAATGAGGCAGAGGAATCTATAAGTGCAAATCAGGATAACAGGCCTTGCAAATCTAACAGGAAACGGCAATCCAGACGAGAATGTAATTGACAGTGCACTAATTTACCTTCAGCTTCAAGATATATATATTATCGTTTTTTGAAAACCAATTCTCTTCTGAGTGCAGCTTTTGGCACGTCAAGTCTTCAGACAGAAGTTCCAAAGATCGAAGGCAAAAGGTCTTTGCGTGGATTTAATTGCTTTATTGGGTTTATCTGATTTTAGCAAATTAAAGATAAATCAACCATGATCTTGGTTTAATTTCTGATAGGCCTTGTTTGAGACAGCAGTCTGCAAAGTTCAAAACAGAGGAACCCGTGGCTGCCAATGATATTTTGGAGACAGAAAATTCCAATTCTAATGACGCTTCTCAATGTAAAGAGACTTCAGTTCTACAAACAGAGGTGCAAAAGGTTGAAGGCAAGAGGTTAGTGCATGGATATTTAGTTGCTTTATTTGAGTTTTTGTTTTCAGGATGTGCTCAAAATGACATAGCATTAATACATACTGAATATTAGCTTCATTGATTTTCCAATAGGCCTTGTTCGAGAAGGCAGTCTGCAAGATTCAAGGCTGAGGAACCAGTTAATACAAATGACTTGCAACAAATAGAAACTTCCGATTCTACCAATGCTTCTCAATGCCAGGAGACTTCAGTTCTTCAAGCAGAGATTCAGAAGGTTGAAGGCAAAAGGTCTGTTCGTGGATATTTAATTGCTTTGTTTGGCTTCATTTCTTAAACTATTCCAGATAATATAGCATACACGAGATCGATTGACATGAGCTTTACTGACTTTCTTATCAGGCCTTGTTTGAGAAGGCAGTCCACAAGATTCAAACTCGAGGAACCAGTGGCCACCAAAGACTCACTTGAGATTGAAAATTCAAATTCAACCAGTGCTTTTCCATGCAAAGAGACCATGTGTGAAGTTGTTCCAACTTCATCAGTAGGAAAAGAAGATTATGACAATTCTATTGATAGATCAGAAGTTCAAGAATGTCGTAGGACATCTGTTGGTAGACCGTCAAGGCGAGCCGCTGAGAAAGTTATCTCCTATAAGGAAATTCCAGTTAACGTCAAGATGCGCAGACAGGTATAATCAATCCTAACCAAAATTGGCTCGTCCTGTTTTCTAGAGGAGAGATTTGTGATATTAGTAGATATTGAAGACAAGACTGCAACACTAGTTTTGTATCTGTATTCTTTGATAGCATTAGATTCTGCTCTTACTGTAAAAAGCTCTAGTTTGCTTCCTTGTACCTTAAGACTTAAATGAGCTCATTGAATGAAACCAAACCTTACAACACCTTTCAGACTAAAATGACCAATTAGTTTTAGGACACAATTTTATCTTTGAAACACACTCTTATTTTGCCTTGGCAAAGTTAACTAATGCATCTAGTTGAATGTAGCACAATAGTTTTGCCTTACCAAAGTTAAC

mRNA sequence

TATCACATTAGAAATTTACCCTCAAACTTTTATCAATTTCGCGCTCTTCACTCTCCTCTCAGCAGAAGAAACTTTTATCCTTCTTTCCAAGATCTCTTGTTTAAGCTGAAAGATTTCAGGGTTCCATCGTAGAATCTCCAGCATGGAGAATATCATTTCGCTCGATCCGAAGAACTGCGGCGTTATTCCCGTTTGTTTCCGCCCGATTGGTATTAGTACAGTTGGATTTCCGGAAAATTATTCTGTTTCTAGGCATTGGGATTGCTTAATTCGAACTCTAGTTGCATCTGGGGTGAACTACCTCGGCCTTGTTCTTAGTAAATCGAAGCAAGCGATTTTCAAGTTTGTCTTAGTGACTGAGAAAGTTGGTTTTAGGTCAAAACGTGAAAATAGCTGGGGAGAAAACGATGAAGAGCTCCAAAGGGCAGAGGAAAAGGCTTTCCGATATAAGCAACTTGAAGGAGCAACCTACACTGCAGAAGCGAGATACGAAGACGCAGCCGGGTTTGCTTATGACCTATGAATATGTTGATAAGTTACAGAAGGAAAATATGACACTCATGAAAGTTATCGCGGAAAGAAATCGCATAATTGAGATAAGTGGAAATGAGTTAGAGAAATTGAGAACCAATTTTCAGAAATTGCAGCAGCAGAACATGCAACTTGCCCAAGCAAACTGTCAAATGCTAGCGGAACTGAATTCAAGTAAAGATCGGTTAAAAGCGCTTCAGCATGAGCTTGGATGTAAAAATGGCATTCTTATGTCCAGAAAGCTGGTTTTGGAGAGTAAAGGAAAATCAGCAACACTTCAACCTGGAGAGGTAGGGACCACGGAATGTAATGAGGCAGAGGAATCTATAAGTGCAAATCAGGATAACAGGCCTTGCAAATCTAACAGGAAACGGCAATCCAGACGAGAATCTTTTGGCACGTCAAGTCTTCAGACAGAAGTTCCAAAGATCGAAGGCAAAAGGCCTTGTTTGAGACAGCAGTCTGCAAAGTTCAAAACAGAGGAACCCGTGGCTGCCAATGATATTTTGGAGACAGAAAATTCCAATTCTAATGACGCTTCTCAATGTAAAGAGACTTCAGTTCTACAAACAGAGGTGCAAAAGGTTGAAGGCAAGAGGCCTTGTTCGAGAAGGCAGTCTGCAAGATTCAAGGCTGAGGAACCAGTTAATACAAATGACTTGCAACAAATAGAAACTTCCGATTCTACCAATGCTTCTCAATGCCAGGAGACTTCAGTTCTTCAAGCAGAGATTCAGAAGGTTGAAGGCAAAAGGCCTTGTTTGAGAAGGCAGTCCACAAGATTCAAACTCGAGGAACCAGTGGCCACCAAAGACTCACTTGAGATTGAAAATTCAAATTCAACCAGTGCTTTTCCATGCAAAGAGACCATGTGTGAAGTTGTTCCAACTTCATCAGTAGGAAAAGAAGATTATGACAATTCTATTGATAGATCAGAAGTTCAAGAATGTCGTAGGACATCTGTTGGTAGACCGTCAAGGCGAGCCGCTGAGAAAGTTATCTCCTATAAGGAAATTCCAGTTAACGTCAAGATGCGCAGACAGGTATAATCAATCCTAACCAAAATTGGCTCGTCCTGTTTTCTAGAGGAGAGATTTGTGATATTAGTAGATATTGAAGACAAGACTGCAACACTAGTTTTGTATCTGTATTCTTTGATAGCATTAGATTCTGCTCTTACTGTAAAAAGCTCTAGTTTGCTTCCTTGTACCTTAAGACTTAAATGAGCTCATTGAATGAAACCAAACCTTACAACACCTTTCAGACTAAAATGACCAATTAGTTTTAGGACACAATTTTATCTTTGAAACACACTCTTATTTTGCCTTGGCAAAGTTAACTAATGCATCTAGTTGAATGTAGCACAATAGTTTTGCCTTACCAAAGTTAAC

Coding sequence (CDS)

ATGAAGAGCTCCAAAGGGCAGAGGAAAAGGCTTTCCGATATAAGCAACTTGAAGGAGCAACCTACACTGCAGAAGCGAGATACGAAGACGCAGCCGGGTTTGCTTATGACCTATGAATATGTTGATAAGTTACAGAAGGAAAATATGACACTCATGAAAGTTATCGCGGAAAGAAATCGCATAATTGAGATAAGTGGAAATGAGTTAGAGAAATTGAGAACCAATTTTCAGAAATTGCAGCAGCAGAACATGCAACTTGCCCAAGCAAACTGTCAAATGCTAGCGGAACTGAATTCAAGTAAAGATCGGTTAAAAGCGCTTCAGCATGAGCTTGGATGTAAAAATGGCATTCTTATGTCCAGAAAGCTGGTTTTGGAGAGTAAAGGAAAATCAGCAACACTTCAACCTGGAGAGGTAGGGACCACGGAATGTAATGAGGCAGAGGAATCTATAAGTGCAAATCAGGATAACAGGCCTTGCAAATCTAACAGGAAACGGCAATCCAGACGAGAATCTTTTGGCACGTCAAGTCTTCAGACAGAAGTTCCAAAGATCGAAGGCAAAAGGCCTTGTTTGAGACAGCAGTCTGCAAAGTTCAAAACAGAGGAACCCGTGGCTGCCAATGATATTTTGGAGACAGAAAATTCCAATTCTAATGACGCTTCTCAATGTAAAGAGACTTCAGTTCTACAAACAGAGGTGCAAAAGGTTGAAGGCAAGAGGCCTTGTTCGAGAAGGCAGTCTGCAAGATTCAAGGCTGAGGAACCAGTTAATACAAATGACTTGCAACAAATAGAAACTTCCGATTCTACCAATGCTTCTCAATGCCAGGAGACTTCAGTTCTTCAAGCAGAGATTCAGAAGGTTGAAGGCAAAAGGCCTTGTTTGAGAAGGCAGTCCACAAGATTCAAACTCGAGGAACCAGTGGCCACCAAAGACTCACTTGAGATTGAAAATTCAAATTCAACCAGTGCTTTTCCATGCAAAGAGACCATGTGTGAAGTTGTTCCAACTTCATCAGTAGGAAAAGAAGATTATGACAATTCTATTGATAGATCAGAAGTTCAAGAATGTCGTAGGACATCTGTTGGTAGACCGTCAAGGCGAGCCGCTGAGAAAGTTATCTCCTATAAGGAAATTCCAGTTAACGTCAAGATGCGCAGACAGGTATAA

Protein sequence

MKSSKGQRKRLSDISNLKEQPTLQKRDTKTQPGLLMTYEYVDKLQKENMTLMKVIAERNRIIEISGNELEKLRTNFQKLQQQNMQLAQANCQMLAELNSSKDRLKALQHELGCKNGILMSRKLVLESKGKSATLQPGEVGTTECNEAEESISANQDNRPCKSNRKRQSRRESFGTSSLQTEVPKIEGKRPCLRQQSAKFKTEEPVAANDILETENSNSNDASQCKETSVLQTEVQKVEGKRPCSRRQSARFKAEEPVNTNDLQQIETSDSTNASQCQETSVLQAEIQKVEGKRPCLRRQSTRFKLEEPVATKDSLEIENSNSTSAFPCKETMCEVVPTSSVGKEDYDNSIDRSEVQECRRTSVGRPSRRAAEKVISYKEIPVNVKMRRQV

Homology

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BLAST of MELO3C019841.jh1 vs. NCBI nr
Match: XP_008456542.1 (PREDICTED: shugoshin-1 isoform X2 [Cucumis melo])

HSP 1 Score: 729 bits (1882), Expect = 2.06e-264
Identity = 390/390 (100.00%), Postives = 390/390 (100.00%), Query Frame = 0


Query: 1   MKSSKGQRKRLSDISNLKEQPTLQKRDTKTQPGLLMTYEYVDKLQKENMTLMKVIAERNR 60
           MKSSKGQRKRLSDISNLKEQPTLQKRDTKTQPGLLMTYEYVDKLQKENMTLMKVIAERNR
Sbjct: 1   MKSSKGQRKRLSDISNLKEQPTLQKRDTKTQPGLLMTYEYVDKLQKENMTLMKVIAERNR 60

Query: 61  IIEISGNELEKLRTNFQKLQQQNMQLAQANCQMLAELNSSKDRLKALQHELGCKNGILMS 120
           IIEISGNELEKLRTNFQKLQQQNMQLAQANCQMLAELNSSKDRLKALQHELGCKNGILMS
Sbjct: 61  IIEISGNELEKLRTNFQKLQQQNMQLAQANCQMLAELNSSKDRLKALQHELGCKNGILMS 120

Query: 121 RKLVLESKGKSATLQPGEVGTTECNEAEESISANQDNRPCKSNRKRQSRRESFGTSSLQT 180
           RKLVLESKGKSATLQPGEVGTTECNEAEESISANQDNRPCKSNRKRQSRRESFGTSSLQT
Sbjct: 121 RKLVLESKGKSATLQPGEVGTTECNEAEESISANQDNRPCKSNRKRQSRRESFGTSSLQT 180

Query: 181 EVPKIEGKRPCLRQQSAKFKTEEPVAANDILETENSNSNDASQCKETSVLQTEVQKVEGK 240
           EVPKIEGKRPCLRQQSAKFKTEEPVAANDILETENSNSNDASQCKETSVLQTEVQKVEGK
Sbjct: 181 EVPKIEGKRPCLRQQSAKFKTEEPVAANDILETENSNSNDASQCKETSVLQTEVQKVEGK 240

Query: 241 RPCSRRQSARFKAEEPVNTNDLQQIETSDSTNASQCQETSVLQAEIQKVEGKRPCLRRQS 300
           RPCSRRQSARFKAEEPVNTNDLQQIETSDSTNASQCQETSVLQAEIQKVEGKRPCLRRQS
Sbjct: 241 RPCSRRQSARFKAEEPVNTNDLQQIETSDSTNASQCQETSVLQAEIQKVEGKRPCLRRQS 300

Query: 301 TRFKLEEPVATKDSLEIENSNSTSAFPCKETMCEVVPTSSVGKEDYDNSIDRSEVQECRR 360
           TRFKLEEPVATKDSLEIENSNSTSAFPCKETMCEVVPTSSVGKEDYDNSIDRSEVQECRR
Sbjct: 301 TRFKLEEPVATKDSLEIENSNSTSAFPCKETMCEVVPTSSVGKEDYDNSIDRSEVQECRR 360

Query: 361 TSVGRPSRRAAEKVISYKEIPVNVKMRRQV 390
           TSVGRPSRRAAEKVISYKEIPVNVKMRRQV
Sbjct: 361 TSVGRPSRRAAEKVISYKEIPVNVKMRRQV 390

[Close]

BLAST of MELO3C019841.jh1 vs. NCBI nr
Match: XP_008456540.1 (PREDICTED: shugoshin-1 isoform X1 [Cucumis melo] >TYJ99967.1 shugoshin-1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 729 bits (1882), Expect = 5.47e-264
Identity = 390/390 (100.00%), Postives = 390/390 (100.00%), Query Frame = 0


Query: 1   MKSSKGQRKRLSDISNLKEQPTLQKRDTKTQPGLLMTYEYVDKLQKENMTLMKVIAERNR 60
           MKSSKGQRKRLSDISNLKEQPTLQKRDTKTQPGLLMTYEYVDKLQKENMTLMKVIAERNR
Sbjct: 27  MKSSKGQRKRLSDISNLKEQPTLQKRDTKTQPGLLMTYEYVDKLQKENMTLMKVIAERNR 86

Query: 61  IIEISGNELEKLRTNFQKLQQQNMQLAQANCQMLAELNSSKDRLKALQHELGCKNGILMS 120
           IIEISGNELEKLRTNFQKLQQQNMQLAQANCQMLAELNSSKDRLKALQHELGCKNGILMS
Sbjct: 87  IIEISGNELEKLRTNFQKLQQQNMQLAQANCQMLAELNSSKDRLKALQHELGCKNGILMS 146

Query: 121 RKLVLESKGKSATLQPGEVGTTECNEAEESISANQDNRPCKSNRKRQSRRESFGTSSLQT 180
           RKLVLESKGKSATLQPGEVGTTECNEAEESISANQDNRPCKSNRKRQSRRESFGTSSLQT
Sbjct: 147 RKLVLESKGKSATLQPGEVGTTECNEAEESISANQDNRPCKSNRKRQSRRESFGTSSLQT 206

Query: 181 EVPKIEGKRPCLRQQSAKFKTEEPVAANDILETENSNSNDASQCKETSVLQTEVQKVEGK 240
           EVPKIEGKRPCLRQQSAKFKTEEPVAANDILETENSNSNDASQCKETSVLQTEVQKVEGK
Sbjct: 207 EVPKIEGKRPCLRQQSAKFKTEEPVAANDILETENSNSNDASQCKETSVLQTEVQKVEGK 266

Query: 241 RPCSRRQSARFKAEEPVNTNDLQQIETSDSTNASQCQETSVLQAEIQKVEGKRPCLRRQS 300
           RPCSRRQSARFKAEEPVNTNDLQQIETSDSTNASQCQETSVLQAEIQKVEGKRPCLRRQS
Sbjct: 267 RPCSRRQSARFKAEEPVNTNDLQQIETSDSTNASQCQETSVLQAEIQKVEGKRPCLRRQS 326

Query: 301 TRFKLEEPVATKDSLEIENSNSTSAFPCKETMCEVVPTSSVGKEDYDNSIDRSEVQECRR 360
           TRFKLEEPVATKDSLEIENSNSTSAFPCKETMCEVVPTSSVGKEDYDNSIDRSEVQECRR
Sbjct: 327 TRFKLEEPVATKDSLEIENSNSTSAFPCKETMCEVVPTSSVGKEDYDNSIDRSEVQECRR 386

Query: 361 TSVGRPSRRAAEKVISYKEIPVNVKMRRQV 390
           TSVGRPSRRAAEKVISYKEIPVNVKMRRQV
Sbjct: 387 TSVGRPSRRAAEKVISYKEIPVNVKMRRQV 416

[Close]

BLAST of MELO3C019841.jh1 vs. NCBI nr
Match: XP_031736418.1 (SHUGOSHIN 2 isoform X2 [Cucumis sativus])

HSP 1 Score: 665 bits (1715), Expect = 6.65e-239
Identity = 360/386 (93.26%), Postives = 367/386 (95.08%), Query Frame = 0


Query: 6   GQRKRLSDISNLKEQPTLQKRDTKTQPGLLMTYEYVDKLQKENMTLMKVIAERNRIIEIS 65
           GQRKRLSDISN KEQPTLQKRDTKTQPGLLMT EYVDKLQKENMTLMKVIAERNRIIEIS
Sbjct: 9   GQRKRLSDISNWKEQPTLQKRDTKTQPGLLMTCEYVDKLQKENMTLMKVIAERNRIIEIS 68

Query: 66  GNELEKLRTNFQKLQQQNMQLAQANCQMLAELNSSKDRLKALQHELGCKNGILMSRKLVL 125
           G ELEKLRTNFQKLQQQNMQLAQ N QMLAELNS KDRLKALQHELGCKNGILMSRKL L
Sbjct: 69  GKELEKLRTNFQKLQQQNMQLAQTNSQMLAELNSCKDRLKALQHELGCKNGILMSRKLDL 128

Query: 126 ESKGKSATLQPGEVGTTECNEAEESISANQDNRPCKSNRKRQSRRESFGTSSLQTEVPKI 185
           ESKGKSATLQPGEVGTTECNEAEES +ANQDNRPCKSNR+RQSRR+SFGTSSLQTEVPKI
Sbjct: 129 ESKGKSATLQPGEVGTTECNEAEESTNANQDNRPCKSNRRRQSRRQSFGTSSLQTEVPKI 188

Query: 186 EGKRPCLRQQSAKFKTEEPVAANDILETENSNSNDASQCKETSVLQTEVQKVEGKRPCSR 245
           EGKRPCLRQQSA FKTEEP+AANDILETENSNSNDASQCKETSVLQTEVQKVE KRPCSR
Sbjct: 189 EGKRPCLRQQSAMFKTEEPLAANDILETENSNSNDASQCKETSVLQTEVQKVESKRPCSR 248

Query: 246 RQSARFKAEEPVNTNDLQQIETSDSTNASQCQETSVLQAEIQKVEGKRPCLRRQSTRFKL 305
           RQSARFKAEEPV TNDL Q+ETSDSTN  QCQETSVLQAEIQKVE KRPCLRRQST+FKL
Sbjct: 249 RQSARFKAEEPVTTNDLHQMETSDSTNTPQCQETSVLQAEIQKVEVKRPCLRRQSTKFKL 308

Query: 306 EEPVATKDSLEIENSNSTS-AFPCKETMCEVVPTSSVGKEDYDNSIDRSEVQECRRTSVG 365
           EEPVA KDSLEIENSNSTS AFPCKET CEVVPTSSVGKEDYDNSID SEVQECRRTSVG
Sbjct: 309 EEPVAIKDSLEIENSNSTSTAFPCKETKCEVVPTSSVGKEDYDNSIDISEVQECRRTSVG 368

Query: 366 RPSRRAAEKVISYKEIPVNVKMRRQV 390
           RPSRRAAEKVISYKEIP+NVKMRRQV
Sbjct: 369 RPSRRAAEKVISYKEIPLNVKMRRQV 394

[Close]

BLAST of MELO3C019841.jh1 vs. NCBI nr
Match: XP_011649425.1 (SHUGOSHIN 2 isoform X1 [Cucumis sativus] >KGN62194.1 hypothetical protein Csa_006836 [Cucumis sativus])

HSP 1 Score: 665 bits (1715), Expect = 1.74e-238
Identity = 360/386 (93.26%), Postives = 367/386 (95.08%), Query Frame = 0


Query: 6   GQRKRLSDISNLKEQPTLQKRDTKTQPGLLMTYEYVDKLQKENMTLMKVIAERNRIIEIS 65
           GQRKRLSDISN KEQPTLQKRDTKTQPGLLMT EYVDKLQKENMTLMKVIAERNRIIEIS
Sbjct: 35  GQRKRLSDISNWKEQPTLQKRDTKTQPGLLMTCEYVDKLQKENMTLMKVIAERNRIIEIS 94

Query: 66  GNELEKLRTNFQKLQQQNMQLAQANCQMLAELNSSKDRLKALQHELGCKNGILMSRKLVL 125
           G ELEKLRTNFQKLQQQNMQLAQ N QMLAELNS KDRLKALQHELGCKNGILMSRKL L
Sbjct: 95  GKELEKLRTNFQKLQQQNMQLAQTNSQMLAELNSCKDRLKALQHELGCKNGILMSRKLDL 154

Query: 126 ESKGKSATLQPGEVGTTECNEAEESISANQDNRPCKSNRKRQSRRESFGTSSLQTEVPKI 185
           ESKGKSATLQPGEVGTTECNEAEES +ANQDNRPCKSNR+RQSRR+SFGTSSLQTEVPKI
Sbjct: 155 ESKGKSATLQPGEVGTTECNEAEESTNANQDNRPCKSNRRRQSRRQSFGTSSLQTEVPKI 214

Query: 186 EGKRPCLRQQSAKFKTEEPVAANDILETENSNSNDASQCKETSVLQTEVQKVEGKRPCSR 245
           EGKRPCLRQQSA FKTEEP+AANDILETENSNSNDASQCKETSVLQTEVQKVE KRPCSR
Sbjct: 215 EGKRPCLRQQSAMFKTEEPLAANDILETENSNSNDASQCKETSVLQTEVQKVESKRPCSR 274

Query: 246 RQSARFKAEEPVNTNDLQQIETSDSTNASQCQETSVLQAEIQKVEGKRPCLRRQSTRFKL 305
           RQSARFKAEEPV TNDL Q+ETSDSTN  QCQETSVLQAEIQKVE KRPCLRRQST+FKL
Sbjct: 275 RQSARFKAEEPVTTNDLHQMETSDSTNTPQCQETSVLQAEIQKVEVKRPCLRRQSTKFKL 334

Query: 306 EEPVATKDSLEIENSNSTS-AFPCKETMCEVVPTSSVGKEDYDNSIDRSEVQECRRTSVG 365
           EEPVA KDSLEIENSNSTS AFPCKET CEVVPTSSVGKEDYDNSID SEVQECRRTSVG
Sbjct: 335 EEPVAIKDSLEIENSNSTSTAFPCKETKCEVVPTSSVGKEDYDNSIDISEVQECRRTSVG 394

Query: 366 RPSRRAAEKVISYKEIPVNVKMRRQV 390
           RPSRRAAEKVISYKEIP+NVKMRRQV
Sbjct: 395 RPSRRAAEKVISYKEIPLNVKMRRQV 420

[Close]

BLAST of MELO3C019841.jh1 vs. NCBI nr
Match: XP_038884301.1 (SHUGOSHIN 2 [Benincasa hispida])

HSP 1 Score: 624 bits (1610), Expect = 1.88e-222
Identity = 344/397 (86.65%), Postives = 364/397 (91.69%), Query Frame = 0


Query: 1   MKSSK---GQRKRLSDISNLKEQPTLQKRDTKTQPGLLMTYEYVDKLQKENMTLMKVIAE 60
           MKSSK   GQRKRLSDISNLKEQPTLQKRDT  QP LLMT+EYVDKLQKENMTLMKVIAE
Sbjct: 27  MKSSKVGGGQRKRLSDISNLKEQPTLQKRDTMPQPSLLMTHEYVDKLQKENMTLMKVIAE 86

Query: 61  RNRIIEISGNELEKLRTNFQKLQQQNMQLAQANCQMLAELNSSKDRLKALQHELGCKNGI 120
           RNRIIEISGNELEKLRTNFQKLQQQN+QLAQAN QMLAELNS K+RLKALQHELGCKNGI
Sbjct: 87  RNRIIEISGNELEKLRTNFQKLQQQNLQLAQANSQMLAELNSGKERLKALQHELGCKNGI 146

Query: 121 LMSRKLVLESKGKSATLQPGEVGTTECNEAEESISANQDNRPCKSNRKRQSRRESFGTSS 180
           LMSRKL LE KGKSATL+PGEVGTTEC+EAEESI+ANQDNRPCK+NR+RQSRRESFGTS 
Sbjct: 147 LMSRKLDLERKGKSATLEPGEVGTTECSEAEESINANQDNRPCKTNRRRQSRRESFGTSF 206

Query: 181 LQTEVPKIEGKRPCLRQQSAKFKTEEPVAANDILETENSNSNDASQCKETSVLQTEVQKV 240
           LQ EVP++EGKRPCLR+QSAKFKTEEPVAANDILETENSNSNDASQCKETSV QTEVQKV
Sbjct: 207 LQKEVPRVEGKRPCLRRQSAKFKTEEPVAANDILETENSNSNDASQCKETSVHQTEVQKV 266

Query: 241 EGKRPCSRRQSARFKAEEPVNTNDLQQIETSDSTNASQCQETSVLQAEIQKVEGKRPCLR 300
           EGKRPCSRRQSARFKAEEPV  NDL QIE S+ST+ASQC+E SVLQ ++QKVEGKRPCLR
Sbjct: 267 EGKRPCSRRQSARFKAEEPVAANDLFQIEDSNSTDASQCKEISVLQTDVQKVEGKRPCLR 326

Query: 301 RQSTRFKLEEPVATKDSLEIENSNSTSAFPCKE-TMCEV---VPTSSVGKEDYDNSIDRS 360
           RQST FKL+EPVA KDS+EIENSNSTS F CKE  MCEV   VPTSSV KE Y NS DRS
Sbjct: 327 RQSTGFKLKEPVAVKDSVEIENSNSTSTFLCKEEVMCEVGKIVPTSSVEKEVYGNSTDRS 386

Query: 361 EVQECRRTSVGRPSRRAAEKVISYKEIPVNVKMRRQV 390
           EVQECRR SVGRPSRRAAEKVISYKEIP+NVKMRRQ+
Sbjct: 387 EVQECRRISVGRPSRRAAEKVISYKEIPLNVKMRRQI 423

[Close]

BLAST of MELO3C019841.jh1 vs. ExPASy Swiss-Prot
Match: Q0WTB8 (SHUGOSHIN 2 OS=Arabidopsis thaliana OX=3702 GN=SGO2 PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 5.9e-33
Identity = 149/468 (31.84%), Postives = 223/468 (47.65%), Query Frame = 0


Query: 12  SDISNLKEQPTLQKRDTKTQPGLLM-TYEYVDKLQKENMTLMKVIAERNRIIEISGNELE 71
           S   N+K+   + K +T+ +  +L  + EY  KLQKENMTLMK +A RN+++E+SG E++
Sbjct: 17  SQKDNVKQ---MDKEETQQKENMLFSSQEYAAKLQKENMTLMKALAHRNKLVELSGIEIQ 76

Query: 72  KLRTNFQKLQQQNMQLAQANCQMLAELNSSKDRLKALQHELGCKNGILMSRKLV------ 131
           KLR N + +Q++N+QLAQAN QMLAELN+++DRLK LQHELGCKN +L  +K +      
Sbjct: 77  KLRINLRSVQEKNLQLAQANSQMLAELNTNRDRLKDLQHELGCKNALLKVKKHLEEQVLP 136

Query: 132 ---LESKGK-SATLQPGEVGTTECNE-------------AEESISANQDNRPCK-SNRKR 191
               ESK K SA+   G+  + + ++              + S+SA+    P   SN K 
Sbjct: 137 RTHHESKDKVSASASDGDCKSFQVHDIKHKDTKRKRTTRIKSSVSADVKPIPVNDSNSKA 196

Query: 192 QSRRESFG---TSSLQTEVPKIEG------------------------------------ 251
             +R   G   T+ +  E+ + E                                     
Sbjct: 197 NRKRRVSGVIDTTGIPEEICQTEDDIDKGVVSRGVNQDIDNVVNKKFVPDAANPVKESVH 256

Query: 252 -KRPCLRQQSAKFKTEEPVAANDILETENSNSN------------------DASQCKETS 311
            KR C R+QS +F  +E      +LE + +  +                  +A  CK   
Sbjct: 257 RKRQCTRRQSTRFDVQETKQTEKLLEMDGAKESKETASFSLRRRSARLRHEEAEPCKSLH 316

Query: 312 VLQTEVQKVEGKRPCSRRQSARFKAEEP-----VNTNDLQQIETSDSTNA-SQCQETSVL 371
               EV++   +R  S R SARF  +EP      N +D + I   +S  + S+  E S  
Sbjct: 317 E-GDEVRETIKRRRVSLRLSARFDIQEPHVTETSNADDARSIVIEESAGSRSESVEPSES 376

Query: 372 QAEIQKVEGKRP-CLRRQSTRFKLEEPVATKDSLEIENSNSTSAFPCKETMCEVVPTSSV 390
           + E +++  KR    RRQST+ K +   A K+     +  +T    C +       T S 
Sbjct: 377 RHETKEITRKRSFSTRRQSTKGKSQTDEAIKEIATDPSLVNTIVQECDQ------ETESK 436

[Close]

BLAST of MELO3C019841.jh1 vs. ExPASy Swiss-Prot
Match: F4J3S1 (SHUGOSHIN 1 OS=Arabidopsis thaliana OX=3702 GN=SGO1 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 3.5e-25
Identity = 114/339 (33.63%), Postives = 174/339 (51.33%), Query Frame = 0


Query: 4   SKGQRKRLSDISNLKEQPTLQKRDTKTQPG--LLMTYEYVDKLQKENMTLMKVIAERNRI 63
           +  QR++L DI+NL+ Q  L  +  K Q    L+ + E  + LQKEN  LMKV+ ER+ I
Sbjct: 34  NSAQRRKLGDITNLQNQKNLMNQGAKHQQQAILISSKENAENLQKENTKLMKVVMERDGI 93

Query: 64  IEISGNELEKLRTNFQKLQQQNMQLAQANCQMLAELNSSKDRLKALQHELGCKNGILMSR 123
                ++L+KLR  FQK+Q+QN+ LAQAN ++LAE N+SKD+LK LQHELGCKNG++M+R
Sbjct: 94  ----KSDLKKLRIEFQKVQEQNLLLAQANTRILAEFNTSKDQLKVLQHELGCKNGLVMAR 153

Query: 124 KLVLE----------SKGKS-ATLQPGEVGTTECNEAE-ESISANQDNRPCKSNRKRQSR 183
           K++L+          SK K+ A    G   T + N+A+ E  S + +    + N K  S+
Sbjct: 154 KMLLKEQTLPCTRHASKVKAQANACGGACKTFQPNDADHEHASGSSNANSLQRNEKANSK 213

Query: 184 RESFGTSS-LQTEVPKIEGKRPCLRQQSAKFKTEEPVAANDILETENSNSNDASQCKETS 243
           R   G  +   +EV  I G+     Q       ++ V+ +D     + N N         
Sbjct: 214 RRVSGRKNPANSEVLDIIGRSGETCQMEDNIDNKKLVSDSDNDAENHINDN--------- 273

Query: 244 VLQTEVQKVEGKRPCSRRQSARFKAEEPVNTNDLQQI----ETSDSTNASQCQETSVLQA 303
                   V+ KR C+ RQS+  K  E   T  LQ++    E       S  + +  L++
Sbjct: 274 --------VQSKRYCAGRQSSSSKTREASQTETLQKVVDAKEIKGDARFSLTKHSDWLKS 333

Query: 304 E----IQKVEGKRPCLRRQSTRFKLEEPVATK---DSLE 317
           +     + +   R  LRR+S R K +EP  ++   DS+E
Sbjct: 334 QEPEPSESLYESRFPLRRRSARLKSQEPEPSESFHDSIE 351

[Close]

BLAST of MELO3C019841.jh1 vs. ExPASy Swiss-Prot
Match: E3VXF2 (Shugoshin-1 OS=Oryza sativa subsp. japonica OX=39947 GN=SGO1 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 7.2e-23
Identity = 127/440 (28.86%), Postives = 190/440 (43.18%), Query Frame = 0


Query: 46  KENMTLMKVIAERNRIIEISGNELEKLRTNFQKLQQQNMQLAQANCQMLAELNSSKDRLK 105
           KEN  L  ++AERN++IE+S  EL+K+R   Q +QQ+N+QL QAN QM AE+N  KDR+K
Sbjct: 55  KENAKLRHLLAERNKVIEVSRVELQKIRLALQAMQQKNLQLVQANSQMFAEINQGKDRIK 114

Query: 106 ALQHELGCKNGIL-----------------MSRKLVLESKGKSATLQPGEV--------- 165
            LQHEL C   +L                  +R  +LE K +S+   P +          
Sbjct: 115 LLQHELACTIAVLKVKGSELEKMSKTSNNQQNRAKILEKKTRSSKCAPTKAHQMAAGSIR 174

Query: 166 -----------GTTECNEAEESISANQDNRPCKSNRKRQSRRESFGTSSLQTEV-PKIE- 225
                        T C+E  +    ++ N+ C + RK +S   +  T+++Q    P +E 
Sbjct: 175 EHLVEIQSAVPSYTSCHEPPQ----DKTNKRCTNRRKSESCEVTMDTNTVQHSCRPHVEY 234

Query: 226 -------GKRPCLRQQSAKF-----------------------------KTEEPVAANDI 285
                    R   R++SA+                              K +EP A  D+
Sbjct: 235 NGSSHDDDPRKTRRRRSARLNPGSFEVAEICDKLHEDATVPSAPSSNVPKLQEPNAGKDM 294

Query: 286 LETENSNS-------------NDASQCKE-----TSVLQTEVQKVEGKRPCSRRQSARFK 345
           +      S              +A + KE     +SV   E  K + + P   R+S R  
Sbjct: 295 ICGGKMKSLQKELPCDAIAQVVEAPELKEIQEAGSSVAGGEAHKFDIEDPEPPRKSMRID 354

Query: 346 AEEPVNTNDLQQIETSDSTNASQCQET---SVLQAEIQKVEGKRPCLRRQSTRFKLEEPV 389
           A    N   L+  E+  ++N   C      S     IQ  E KR   RR+S+R       
Sbjct: 355 A----NKRKLESFESRLASNKEDCINAICDSTSSVPIQH-EQKRKLSRRKSSRLDPGPWE 414

[Close]

BLAST of MELO3C019841.jh1 vs. ExPASy Swiss-Prot
Match: Q4QSC8 (Shugoshin-1 OS=Zea mays OX=4577 GN=SGO1 PE=2 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 4.5e-17
Identity = 111/418 (26.56%), Postives = 188/418 (44.98%), Query Frame = 0


Query: 41  VDKLQKENMTLMKVIAERNRIIEISGNELEKLRTNFQKLQQQNMQLAQANCQMLAELNSS 100
           V  L KEN  L+ ++ E+ +II++S  E+ KLR   Q  +QQN+ L Q N QMLAE+N+ 
Sbjct: 59  VPDLVKENTKLLTLLNEKTKIIDLSRVEIYKLRLALQASKQQNLHLTQTNSQMLAEINTG 118

Query: 101 KDRLKALQHELGCKNGIL------MSRK-------------LVLESKGKSATLQPGEVGT 160
           KDR+K LQHEL C   +L      + RK              VL++K  +  ++   VG 
Sbjct: 119 KDRIKMLQHELSCTTALLKVKDSELDRKKNAGNVQQKGVKSQVLKTKASTVAVEAHHVGD 178

Query: 161 TECN-------EAEESISAN-------QDNRPCKSNRKRQSRRESFG------------- 220
           +  +       E++ ++S+N       QD +  +  ++R+S R + G             
Sbjct: 179 SVTSGVEHHVVESQSAVSSNTVCQEPPQDGKQKRMPQRRRSSRLNQGSCEIRGVSQNTLH 238

Query: 221 ----------TSSLQTEVPKIEGKRPCLRQQSAKFKTEEPVAANDILETENS---NSNDA 280
                     T SL+ +  +  GK     Q        E + A++  +TE +      D 
Sbjct: 239 ENPVVPVAPSTLSLEKQYGQTTGKHMKSLQNECSATVHEVIMASEFEKTEINELPQKTDL 298

Query: 281 SQCKETSVLQTEVQKVE-GKRPCSRRQSARFKAEEPVNTNDLQQIETSDSTNASQCQETS 340
            +  E    +TEVQ  + G +  + +Q+    ++  ++ N +   E  +     +C   S
Sbjct: 299 KEIPEACSSETEVQSHKIGDKAFNSKQNHLTGSQSSLSFNTVDTPEPPEDNTVKRC---S 358

Query: 341 VLQAEIQKVEGKRPCLRRQSTRFKLEEPVATKDSLEIENSNSTSAFPCKETMCEVVPTSS 389
             ++ I+ V  K   +  +  R + +     K S  + + +S       ET  + V  S 
Sbjct: 359 KKRSSIEDVNAKLDTITSEPLRHEEKRKSRRKISARLNSVSSEHTDIVVETEHKDVIVSL 418

[Close]

BLAST of MELO3C019841.jh1 vs. ExPASy TrEMBL
Match: A0A1S3C3G9 (shugoshin-1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496463 PE=3 SV=1)

HSP 1 Score: 729 bits (1882), Expect = 9.98e-265
Identity = 390/390 (100.00%), Postives = 390/390 (100.00%), Query Frame = 0


Query: 1   MKSSKGQRKRLSDISNLKEQPTLQKRDTKTQPGLLMTYEYVDKLQKENMTLMKVIAERNR 60
           MKSSKGQRKRLSDISNLKEQPTLQKRDTKTQPGLLMTYEYVDKLQKENMTLMKVIAERNR
Sbjct: 1   MKSSKGQRKRLSDISNLKEQPTLQKRDTKTQPGLLMTYEYVDKLQKENMTLMKVIAERNR 60

Query: 61  IIEISGNELEKLRTNFQKLQQQNMQLAQANCQMLAELNSSKDRLKALQHELGCKNGILMS 120
           IIEISGNELEKLRTNFQKLQQQNMQLAQANCQMLAELNSSKDRLKALQHELGCKNGILMS
Sbjct: 61  IIEISGNELEKLRTNFQKLQQQNMQLAQANCQMLAELNSSKDRLKALQHELGCKNGILMS 120

Query: 121 RKLVLESKGKSATLQPGEVGTTECNEAEESISANQDNRPCKSNRKRQSRRESFGTSSLQT 180
           RKLVLESKGKSATLQPGEVGTTECNEAEESISANQDNRPCKSNRKRQSRRESFGTSSLQT
Sbjct: 121 RKLVLESKGKSATLQPGEVGTTECNEAEESISANQDNRPCKSNRKRQSRRESFGTSSLQT 180

Query: 181 EVPKIEGKRPCLRQQSAKFKTEEPVAANDILETENSNSNDASQCKETSVLQTEVQKVEGK 240
           EVPKIEGKRPCLRQQSAKFKTEEPVAANDILETENSNSNDASQCKETSVLQTEVQKVEGK
Sbjct: 181 EVPKIEGKRPCLRQQSAKFKTEEPVAANDILETENSNSNDASQCKETSVLQTEVQKVEGK 240

Query: 241 RPCSRRQSARFKAEEPVNTNDLQQIETSDSTNASQCQETSVLQAEIQKVEGKRPCLRRQS 300
           RPCSRRQSARFKAEEPVNTNDLQQIETSDSTNASQCQETSVLQAEIQKVEGKRPCLRRQS
Sbjct: 241 RPCSRRQSARFKAEEPVNTNDLQQIETSDSTNASQCQETSVLQAEIQKVEGKRPCLRRQS 300

Query: 301 TRFKLEEPVATKDSLEIENSNSTSAFPCKETMCEVVPTSSVGKEDYDNSIDRSEVQECRR 360
           TRFKLEEPVATKDSLEIENSNSTSAFPCKETMCEVVPTSSVGKEDYDNSIDRSEVQECRR
Sbjct: 301 TRFKLEEPVATKDSLEIENSNSTSAFPCKETMCEVVPTSSVGKEDYDNSIDRSEVQECRR 360

Query: 361 TSVGRPSRRAAEKVISYKEIPVNVKMRRQV 390
           TSVGRPSRRAAEKVISYKEIPVNVKMRRQV
Sbjct: 361 TSVGRPSRRAAEKVISYKEIPVNVKMRRQV 390

[Close]

BLAST of MELO3C019841.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BLG7 (Shugoshin-1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00080 PE=3 SV=1)

HSP 1 Score: 729 bits (1882), Expect = 2.65e-264
Identity = 390/390 (100.00%), Postives = 390/390 (100.00%), Query Frame = 0


Query: 1   MKSSKGQRKRLSDISNLKEQPTLQKRDTKTQPGLLMTYEYVDKLQKENMTLMKVIAERNR 60
           MKSSKGQRKRLSDISNLKEQPTLQKRDTKTQPGLLMTYEYVDKLQKENMTLMKVIAERNR
Sbjct: 27  MKSSKGQRKRLSDISNLKEQPTLQKRDTKTQPGLLMTYEYVDKLQKENMTLMKVIAERNR 86

Query: 61  IIEISGNELEKLRTNFQKLQQQNMQLAQANCQMLAELNSSKDRLKALQHELGCKNGILMS 120
           IIEISGNELEKLRTNFQKLQQQNMQLAQANCQMLAELNSSKDRLKALQHELGCKNGILMS
Sbjct: 87  IIEISGNELEKLRTNFQKLQQQNMQLAQANCQMLAELNSSKDRLKALQHELGCKNGILMS 146

Query: 121 RKLVLESKGKSATLQPGEVGTTECNEAEESISANQDNRPCKSNRKRQSRRESFGTSSLQT 180
           RKLVLESKGKSATLQPGEVGTTECNEAEESISANQDNRPCKSNRKRQSRRESFGTSSLQT
Sbjct: 147 RKLVLESKGKSATLQPGEVGTTECNEAEESISANQDNRPCKSNRKRQSRRESFGTSSLQT 206

Query: 181 EVPKIEGKRPCLRQQSAKFKTEEPVAANDILETENSNSNDASQCKETSVLQTEVQKVEGK 240
           EVPKIEGKRPCLRQQSAKFKTEEPVAANDILETENSNSNDASQCKETSVLQTEVQKVEGK
Sbjct: 207 EVPKIEGKRPCLRQQSAKFKTEEPVAANDILETENSNSNDASQCKETSVLQTEVQKVEGK 266

Query: 241 RPCSRRQSARFKAEEPVNTNDLQQIETSDSTNASQCQETSVLQAEIQKVEGKRPCLRRQS 300
           RPCSRRQSARFKAEEPVNTNDLQQIETSDSTNASQCQETSVLQAEIQKVEGKRPCLRRQS
Sbjct: 267 RPCSRRQSARFKAEEPVNTNDLQQIETSDSTNASQCQETSVLQAEIQKVEGKRPCLRRQS 326

Query: 301 TRFKLEEPVATKDSLEIENSNSTSAFPCKETMCEVVPTSSVGKEDYDNSIDRSEVQECRR 360
           TRFKLEEPVATKDSLEIENSNSTSAFPCKETMCEVVPTSSVGKEDYDNSIDRSEVQECRR
Sbjct: 327 TRFKLEEPVATKDSLEIENSNSTSAFPCKETMCEVVPTSSVGKEDYDNSIDRSEVQECRR 386

Query: 361 TSVGRPSRRAAEKVISYKEIPVNVKMRRQV 390
           TSVGRPSRRAAEKVISYKEIPVNVKMRRQV
Sbjct: 387 TSVGRPSRRAAEKVISYKEIPVNVKMRRQV 416

[Close]

BLAST of MELO3C019841.jh1 vs. ExPASy TrEMBL
Match: A0A1S3C330 (shugoshin-1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496463 PE=3 SV=1)

HSP 1 Score: 729 bits (1882), Expect = 2.65e-264
Identity = 390/390 (100.00%), Postives = 390/390 (100.00%), Query Frame = 0


Query: 1   MKSSKGQRKRLSDISNLKEQPTLQKRDTKTQPGLLMTYEYVDKLQKENMTLMKVIAERNR 60
           MKSSKGQRKRLSDISNLKEQPTLQKRDTKTQPGLLMTYEYVDKLQKENMTLMKVIAERNR
Sbjct: 27  MKSSKGQRKRLSDISNLKEQPTLQKRDTKTQPGLLMTYEYVDKLQKENMTLMKVIAERNR 86

Query: 61  IIEISGNELEKLRTNFQKLQQQNMQLAQANCQMLAELNSSKDRLKALQHELGCKNGILMS 120
           IIEISGNELEKLRTNFQKLQQQNMQLAQANCQMLAELNSSKDRLKALQHELGCKNGILMS
Sbjct: 87  IIEISGNELEKLRTNFQKLQQQNMQLAQANCQMLAELNSSKDRLKALQHELGCKNGILMS 146

Query: 121 RKLVLESKGKSATLQPGEVGTTECNEAEESISANQDNRPCKSNRKRQSRRESFGTSSLQT 180
           RKLVLESKGKSATLQPGEVGTTECNEAEESISANQDNRPCKSNRKRQSRRESFGTSSLQT
Sbjct: 147 RKLVLESKGKSATLQPGEVGTTECNEAEESISANQDNRPCKSNRKRQSRRESFGTSSLQT 206

Query: 181 EVPKIEGKRPCLRQQSAKFKTEEPVAANDILETENSNSNDASQCKETSVLQTEVQKVEGK 240
           EVPKIEGKRPCLRQQSAKFKTEEPVAANDILETENSNSNDASQCKETSVLQTEVQKVEGK
Sbjct: 207 EVPKIEGKRPCLRQQSAKFKTEEPVAANDILETENSNSNDASQCKETSVLQTEVQKVEGK 266

Query: 241 RPCSRRQSARFKAEEPVNTNDLQQIETSDSTNASQCQETSVLQAEIQKVEGKRPCLRRQS 300
           RPCSRRQSARFKAEEPVNTNDLQQIETSDSTNASQCQETSVLQAEIQKVEGKRPCLRRQS
Sbjct: 267 RPCSRRQSARFKAEEPVNTNDLQQIETSDSTNASQCQETSVLQAEIQKVEGKRPCLRRQS 326

Query: 301 TRFKLEEPVATKDSLEIENSNSTSAFPCKETMCEVVPTSSVGKEDYDNSIDRSEVQECRR 360
           TRFKLEEPVATKDSLEIENSNSTSAFPCKETMCEVVPTSSVGKEDYDNSIDRSEVQECRR
Sbjct: 327 TRFKLEEPVATKDSLEIENSNSTSAFPCKETMCEVVPTSSVGKEDYDNSIDRSEVQECRR 386

Query: 361 TSVGRPSRRAAEKVISYKEIPVNVKMRRQV 390
           TSVGRPSRRAAEKVISYKEIPVNVKMRRQV
Sbjct: 387 TSVGRPSRRAAEKVISYKEIPVNVKMRRQV 416

[Close]

BLAST of MELO3C019841.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LMD0 (Shugoshin_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G326470 PE=3 SV=1)

HSP 1 Score: 665 bits (1715), Expect = 8.43e-239
Identity = 360/386 (93.26%), Postives = 367/386 (95.08%), Query Frame = 0


Query: 6   GQRKRLSDISNLKEQPTLQKRDTKTQPGLLMTYEYVDKLQKENMTLMKVIAERNRIIEIS 65
           GQRKRLSDISN KEQPTLQKRDTKTQPGLLMT EYVDKLQKENMTLMKVIAERNRIIEIS
Sbjct: 35  GQRKRLSDISNWKEQPTLQKRDTKTQPGLLMTCEYVDKLQKENMTLMKVIAERNRIIEIS 94

Query: 66  GNELEKLRTNFQKLQQQNMQLAQANCQMLAELNSSKDRLKALQHELGCKNGILMSRKLVL 125
           G ELEKLRTNFQKLQQQNMQLAQ N QMLAELNS KDRLKALQHELGCKNGILMSRKL L
Sbjct: 95  GKELEKLRTNFQKLQQQNMQLAQTNSQMLAELNSCKDRLKALQHELGCKNGILMSRKLDL 154

Query: 126 ESKGKSATLQPGEVGTTECNEAEESISANQDNRPCKSNRKRQSRRESFGTSSLQTEVPKI 185
           ESKGKSATLQPGEVGTTECNEAEES +ANQDNRPCKSNR+RQSRR+SFGTSSLQTEVPKI
Sbjct: 155 ESKGKSATLQPGEVGTTECNEAEESTNANQDNRPCKSNRRRQSRRQSFGTSSLQTEVPKI 214

Query: 186 EGKRPCLRQQSAKFKTEEPVAANDILETENSNSNDASQCKETSVLQTEVQKVEGKRPCSR 245
           EGKRPCLRQQSA FKTEEP+AANDILETENSNSNDASQCKETSVLQTEVQKVE KRPCSR
Sbjct: 215 EGKRPCLRQQSAMFKTEEPLAANDILETENSNSNDASQCKETSVLQTEVQKVESKRPCSR 274

Query: 246 RQSARFKAEEPVNTNDLQQIETSDSTNASQCQETSVLQAEIQKVEGKRPCLRRQSTRFKL 305
           RQSARFKAEEPV TNDL Q+ETSDSTN  QCQETSVLQAEIQKVE KRPCLRRQST+FKL
Sbjct: 275 RQSARFKAEEPVTTNDLHQMETSDSTNTPQCQETSVLQAEIQKVEVKRPCLRRQSTKFKL 334

Query: 306 EEPVATKDSLEIENSNSTS-AFPCKETMCEVVPTSSVGKEDYDNSIDRSEVQECRRTSVG 365
           EEPVA KDSLEIENSNSTS AFPCKET CEVVPTSSVGKEDYDNSID SEVQECRRTSVG
Sbjct: 335 EEPVAIKDSLEIENSNSTSTAFPCKETKCEVVPTSSVGKEDYDNSIDISEVQECRRTSVG 394

Query: 366 RPSRRAAEKVISYKEIPVNVKMRRQV 390
           RPSRRAAEKVISYKEIP+NVKMRRQV
Sbjct: 395 RPSRRAAEKVISYKEIPLNVKMRRQV 420

[Close]

BLAST of MELO3C019841.jh1 vs. ExPASy TrEMBL
Match: A0A6J1JYY1 (SHUGOSHIN 2-like isoform X7 OS=Cucurbita maxima OX=3661 GN=LOC111489140 PE=3 SV=1)

HSP 1 Score: 556 bits (1432), Expect = 9.87e-196
Identity = 312/395 (78.99%), Postives = 339/395 (85.82%), Query Frame = 0


Query: 1   MKSSK---GQRKRLSDISNLKEQPTLQKRDTKTQPGLLMTYEYVDKLQKENMTLMKVIAE 60
           MKSSK    QRKRLSDISNLKEQP LQKRDTK Q  LL TYEYVDKLQKENM L KV+AE
Sbjct: 28  MKSSKVGGSQRKRLSDISNLKEQPILQKRDTKPQSSLLKTYEYVDKLQKENMALTKVLAE 87

Query: 61  RNRIIEISGNELEKLRTNFQKLQQQNMQLAQANCQMLAELNSSKDRLKALQHELGCKNGI 120
           RNRIIEISGNELE LRTNFQKLQQQN+Q AQAN QMLAELNS K+RLKALQHELGCKNGI
Sbjct: 88  RNRIIEISGNELETLRTNFQKLQQQNLQFAQANSQMLAELNSGKERLKALQHELGCKNGI 147

Query: 121 LMSRKLVLESKGKSATLQPGEVGTTECNEAEESISANQDNRPCKSNRKRQSRRESFGTSS 180
           LMSRKL LE KGKSAT QPG VGT + +EA ES++  QDNRPCK+NR+RQSR+ESFGTS 
Sbjct: 148 LMSRKLDLERKGKSATFQPGGVGTAKSSEAAESMNTKQDNRPCKTNRRRQSRQESFGTSV 207

Query: 181 LQTEVPKIEGKRPCLRQQSAKFKTEEPVAANDILETENSNSNDASQCKETSVLQTEVQKV 240
           LQTEV K+EGKRP  R+QSA+FKTEEPVAANDILET+NSNSN++SQCKETSV + EVQKV
Sbjct: 208 LQTEVQKVEGKRP--RRQSARFKTEEPVAANDILETDNSNSNNSSQCKETSVRRAEVQKV 267

Query: 241 EGKRPCSRRQSARFKAEEPVNTNDLQQIETSDSTNASQCQETSVLQAEIQKVEGKRPCLR 300
           EGKRPCSRRQSAR K EEPV TNDL  IE  +ST+ASQC+ETSVLQ E+QKVEG RPCLR
Sbjct: 268 EGKRPCSRRQSARLKIEEPVATNDLLGIENFNSTDASQCRETSVLQTEVQKVEGIRPCLR 327

Query: 301 RQSTRFKLEEPVATKDSLEIENSNSTSAFPCKETMCEV--VPTSSVGKEDYDNSIDRSEV 360
           RQS RFKLEEPVA KDSL+  NSNSTSA  CKE +CE+  VPTSSV  +D  NS DRSEV
Sbjct: 328 RQSARFKLEEPVAIKDSLDTVNSNSTSASLCKEIVCEIKIVPTSSVETKDNGNSTDRSEV 387

Query: 361 QECRRTSVGRPSRRAAEKVISYKEIPVNVKMRRQV 390
           QECRRTSVGRP RRAAEK+ SYKEIP+NVKMRR V
Sbjct: 388 QECRRTSVGRPLRRAAEKIQSYKEIPLNVKMRRPV 420

[Close]

BLAST of MELO3C019841.jh1 vs. TAIR 10
Match: AT5G04320.2 (Shugoshin C terminus )

HSP 1 Score: 143.3 bits (360), Expect = 4.2e-34
Identity = 149/468 (31.84%), Postives = 223/468 (47.65%), Query Frame = 0


Query: 12  SDISNLKEQPTLQKRDTKTQPGLLM-TYEYVDKLQKENMTLMKVIAERNRIIEISGNELE 71
           S   N+K+   + K +T+ +  +L  + EY  KLQKENMTLMK +A RN+++E+SG E++
Sbjct: 17  SQKDNVKQ---MDKEETQQKENMLFSSQEYAAKLQKENMTLMKALAHRNKLVELSGIEIQ 76

Query: 72  KLRTNFQKLQQQNMQLAQANCQMLAELNSSKDRLKALQHELGCKNGILMSRKLV------ 131
           KLR N + +Q++N+QLAQAN QMLAELN+++DRLK LQHELGCKN +L  +K +      
Sbjct: 77  KLRINLRSVQEKNLQLAQANSQMLAELNTNRDRLKDLQHELGCKNALLKVKKHLEEQVLP 136

Query: 132 ---LESKGK-SATLQPGEVGTTECNE-------------AEESISANQDNRPCK-SNRKR 191
               ESK K SA+   G+  + + ++              + S+SA+    P   SN K 
Sbjct: 137 RTHHESKDKVSASASDGDCKSFQVHDIKHKDTKRKRTTRIKSSVSADVKPIPVNDSNSKA 196

Query: 192 QSRRESFG---TSSLQTEVPKIEG------------------------------------ 251
             +R   G   T+ +  E+ + E                                     
Sbjct: 197 NRKRRVSGVIDTTGIPEEICQTEDDIDKGVVSRGVNQDIDNVVNKKFVPDAANPVKESVH 256

Query: 252 -KRPCLRQQSAKFKTEEPVAANDILETENSNSN------------------DASQCKETS 311
            KR C R+QS +F  +E      +LE + +  +                  +A  CK   
Sbjct: 257 RKRQCTRRQSTRFDVQETKQTEKLLEMDGAKESKETASFSLRRRSARLRHEEAEPCKSLH 316

Query: 312 VLQTEVQKVEGKRPCSRRQSARFKAEEP-----VNTNDLQQIETSDSTNA-SQCQETSVL 371
               EV++   +R  S R SARF  +EP      N +D + I   +S  + S+  E S  
Sbjct: 317 E-GDEVRETIKRRRVSLRLSARFDIQEPHVTETSNADDARSIVIEESAGSRSESVEPSES 376

Query: 372 QAEIQKVEGKRP-CLRRQSTRFKLEEPVATKDSLEIENSNSTSAFPCKETMCEVVPTSSV 390
           + E +++  KR    RRQST+ K +   A K+     +  +T    C +       T S 
Sbjct: 377 RHETKEITRKRSFSTRRQSTKGKSQTDEAIKEIATDPSLVNTIVQECDQ------ETESK 436

[Close]

BLAST of MELO3C019841.jh1 vs. TAIR 10
Match: AT5G04320.1 (Shugoshin C terminus )

HSP 1 Score: 126.7 bits (317), Expect = 4.0e-29
Identity = 135/430 (31.40%), Postives = 201/430 (46.74%), Query Frame = 0


Query: 49  MTLMKVIAERNRIIEISGNELEKLRTNFQKLQQQNMQLAQANCQMLAELNSSKDRLKALQ 108
           MTLMK +A RN+++E+SG E++KLR N + +Q++N+QLAQAN QMLAELN+++DRLK LQ
Sbjct: 1   MTLMKALAHRNKLVELSGIEIQKLRINLRSVQEKNLQLAQANSQMLAELNTNRDRLKDLQ 60

Query: 109 HELGCKNGILMSRKLV---------LESKGK-SATLQPGEVGTTECNE------------ 168
           HELGCKN +L  +K +          ESK K SA+   G+  + + ++            
Sbjct: 61  HELGCKNALLKVKKHLEEQVLPRTHHESKDKVSASASDGDCKSFQVHDIKHKDTKRKRTT 120

Query: 169 -AEESISANQDNRPCK-SNRKRQSRRESFG---TSSLQTEVPKIEG-------------- 228
             + S+SA+    P   SN K   +R   G   T+ +  E+ + E               
Sbjct: 121 RIKSSVSADVKPIPVNDSNSKANRKRRVSGVIDTTGIPEEICQTEDDIDKGVVSRGVNQD 180

Query: 229 -----------------------KRPCLRQQSAKFKTEEPVAANDILETENSNSN----- 288
                                  KR C R+QS +F  +E      +LE + +  +     
Sbjct: 181 IDNVVNKKFVPDAANPVKESVHRKRQCTRRQSTRFDVQETKQTEKLLEMDGAKESKETAS 240

Query: 289 -------------DASQCKETSVLQTEVQKVEGKRPCSRRQSARFKAEEP-----VNTND 348
                        +A  CK       EV++   +R  S R SARF  +EP      N +D
Sbjct: 241 FSLRRRSARLRHEEAEPCKSLHE-GDEVRETIKRRRVSLRLSARFDIQEPHVTETSNADD 300

Query: 349 LQQIETSDSTNA-SQCQETSVLQAEIQKVEGKRP-CLRRQSTRFKLEEPVATKDSLEIEN 390
            + I   +S  + S+  E S  + E +++  KR    RRQST+ K +   A K+     +
Sbjct: 301 ARSIVIEESAGSRSESVEPSESRHETKEITRKRSFSTRRQSTKGKSQTDEAIKEIATDPS 360

[Close]

BLAST of MELO3C019841.jh1 vs. TAIR 10
Match: AT3G10440.1 (Shugoshin C terminus )

HSP 1 Score: 117.5 bits (293), Expect = 2.5e-26
Identity = 114/339 (33.63%), Postives = 174/339 (51.33%), Query Frame = 0


Query: 4   SKGQRKRLSDISNLKEQPTLQKRDTKTQPG--LLMTYEYVDKLQKENMTLMKVIAERNRI 63
           +  QR++L DI+NL+ Q  L  +  K Q    L+ + E  + LQKEN  LMKV+ ER+ I
Sbjct: 34  NSAQRRKLGDITNLQNQKNLMNQGAKHQQQAILISSKENAENLQKENTKLMKVVMERDGI 93

Query: 64  IEISGNELEKLRTNFQKLQQQNMQLAQANCQMLAELNSSKDRLKALQHELGCKNGILMSR 123
                ++L+KLR  FQK+Q+QN+ LAQAN ++LAE N+SKD+LK LQHELGCKNG++M+R
Sbjct: 94  ----KSDLKKLRIEFQKVQEQNLLLAQANTRILAEFNTSKDQLKVLQHELGCKNGLVMAR 153

Query: 124 KLVLE----------SKGKS-ATLQPGEVGTTECNEAE-ESISANQDNRPCKSNRKRQSR 183
           K++L+          SK K+ A    G   T + N+A+ E  S + +    + N K  S+
Sbjct: 154 KMLLKEQTLPCTRHASKVKAQANACGGACKTFQPNDADHEHASGSSNANSLQRNEKANSK 213

Query: 184 RESFGTSS-LQTEVPKIEGKRPCLRQQSAKFKTEEPVAANDILETENSNSNDASQCKETS 243
           R   G  +   +EV  I G+     Q       ++ V+ +D     + N N         
Sbjct: 214 RRVSGRKNPANSEVLDIIGRSGETCQMEDNIDNKKLVSDSDNDAENHINDN--------- 273

Query: 244 VLQTEVQKVEGKRPCSRRQSARFKAEEPVNTNDLQQI----ETSDSTNASQCQETSVLQA 303
                   V+ KR C+ RQS+  K  E   T  LQ++    E       S  + +  L++
Sbjct: 274 --------VQSKRYCAGRQSSSSKTREASQTETLQKVVDAKEIKGDARFSLTKHSDWLKS 333

Query: 304 E----IQKVEGKRPCLRRQSTRFKLEEPVATK---DSLE 317
           +     + +   R  LRR+S R K +EP  ++   DS+E
Sbjct: 334 QEPEPSESLYESRFPLRRRSARLKSQEPEPSESFHDSIE 351

The following BLAST results are available for this feature:

BLAST of MELO3C019841.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456542.1	2.06e-264	100.00	PREDICTED: shugoshin-1 isoform X2 [Cucumis melo]	[more]
XP_008456540.1	5.47e-264	100.00	PREDICTED: shugoshin-1 isoform X1 [Cucumis melo] >TYJ99967.1 shugoshin-1 isoform...	[more]
XP_031736418.1	6.65e-239	93.26	SHUGOSHIN 2 isoform X2 [Cucumis sativus]	[more]
XP_011649425.1	1.74e-238	93.26	SHUGOSHIN 2 isoform X1 [Cucumis sativus] >KGN62194.1 hypothetical protein Csa_00...	[more]
XP_038884301.1	1.88e-222	86.65	SHUGOSHIN 2 [Benincasa hispida]	[more]

BLAST of MELO3C019841.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WTB8	5.9e-33	31.84	SHUGOSHIN 2 OS=Arabidopsis thaliana OX=3702 GN=SGO2 PE=2 SV=1	[more]
F4J3S1	3.5e-25	33.63	SHUGOSHIN 1 OS=Arabidopsis thaliana OX=3702 GN=SGO1 PE=3 SV=1	[more]
E3VXF2	7.2e-23	28.86	Shugoshin-1 OS=Oryza sativa subsp. japonica OX=39947 GN=SGO1 PE=2 SV=1	[more]
Q4QSC8	4.5e-17	26.56	Shugoshin-1 OS=Zea mays OX=4577 GN=SGO1 PE=2 SV=2	[more]

BLAST of MELO3C019841.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C3G9	9.98e-265	100.00	shugoshin-1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496463 PE=3 SV=1	[more]
A0A5D3BLG7	2.65e-264	100.00	Shugoshin-1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3...	[more]
A0A1S3C330	2.65e-264	100.00	shugoshin-1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496463 PE=3 SV=1	[more]
A0A0A0LMD0	8.43e-239	93.26	Shugoshin_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G326470...	[more]
A0A6J1JYY1	9.87e-196	78.99	SHUGOSHIN 2-like isoform X7 OS=Cucurbita maxima OX=3661 GN=LOC111489140 PE=3 SV=...	[more]

BLAST of MELO3C019841.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04320.2	4.2e-34	31.84	Shugoshin C terminus	[more]
AT5G04320.1	4.0e-29	31.40	Shugoshin C terminus	[more]
AT3G10440.1	2.5e-26	33.63	Shugoshin C terminus	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 88..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 370..391
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..288
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..232
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 264..278
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 371..391
None	No IPR available	PANTHER	PTHR34373:SF9	SHUGOSHIN 2	coord: 242..415 coord: 18..303
IPR011515	Shugoshin, C-terminal	PFAM	PF07557	Shugoshin_C	coord: 390..414 e-value: 9.6E-11 score: 41.3
IPR044693	Shugoshin, plant	PANTHER	PTHR34373	SHUGOSHIN 2	coord: 242..415 coord: 18..303

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019841.jh1.t1	MELO3C019841.jh1.t1	mRNA
MELO3C019841.jh1.t2	MELO3C019841.jh1.t2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034090	maintenance of meiotic sister chromatid cohesion
biological_process	GO:0045132	meiotic chromosome segregation
biological_process	GO:0045144	meiotic sister chromatid segregation
cellular_component	GO:0000775	chromosome, centromeric region
cellular_component	GO:0005634	nucleus